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ONTOLOGY REPORT - ANNOTATIONS


Term:alcohol biosynthetic process
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Accession:GO:0046165 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
Synonyms:exact_synonym: alcohol anabolism;   alcohol biosynthesis;   alcohol formation;   alcohol synthesis



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aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1H calcium voltage-gated channel subunit alpha1 H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:40,637,420...40,694,616
Ensembl chr 3:40,637,427...40,695,177
JBrowse link
G CYP11B2 cytochrome P450 family 11 subfamily B member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:1686470), (PMID:8645611) GO_Central
MGI
PMID:1686470 PMID:8645611 GO_REF:0000033 NCBI chr 4:1,365,725...1,373,138 JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,192
JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 5:23,053,129...23,058,865
Ensembl chr 5:23,053,892...23,058,470
JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,642
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:44,375,432...44,394,122
Ensembl chr 2:44,375,520...44,396,334
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8647961) Ensembl
MGI
PMID:8647961 GO_REF:0000107 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,392...44,218,713
JBrowse link
G CAPN1 calpain 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr 2:6,997,513...7,024,410
Ensembl chr 2:6,997,985...7,022,684
JBrowse link
G CFTR CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17085523) Ensembl
MGI
PMID:17085523 GO_REF:0000107 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950
JBrowse link
G CYB5R3 cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:6,146,230...6,170,209
Ensembl chr 5:6,146,276...6,170,212
JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:72,057,506...72,079,587
Ensembl chr 9:72,057,511...72,079,444
JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11519011)
(PMID:14684813), (PMID:16321981), (PMID:16513830)
MGI
Ensembl
PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000107 NCBI chr 6:157,483,794...157,519,060
Ensembl chr 6:157,483,783...157,519,061
JBrowse link
G DHCR7 7-dehydrocholesterol reductase involved_in ISO
IEA
IBA
RGD
UniProt
GO_Central
Ensembl
PMID:9831636 PMID:10329655 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:2316918 RGD:632010 NCBI chr 2:2,377,352...2,391,846
Ensembl chr 2:2,377,416...2,391,447
JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:11171067 GO_REF:0000033 GO_REF:0000107 RGD:628445 NCBI chr  X:42,670,592...42,678,571
Ensembl chr  X:42,670,633...42,678,570
JBrowse link
G FDFT1 farnesyl-diphosphate farnesyltransferase 1 involved_in ISO
IBA
RGD
GO_Central
PMID:16440058 GO_REF:0000033 RGD:1626611 NCBI chr14:14,976,259...15,010,701
Ensembl chr14:14,967,074...15,016,227
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,029,147...125,041,040
Ensembl chr  X:125,029,150...125,041,040
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15845870), (PMID:7798939), (PMID:8647961) UniProt
MGI
Ensembl
PMID:7798939 PMID:8647961 PMID:15845870 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,224...84,402,957
JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:27,936,225...27,957,261
Ensembl chr16:27,936,218...27,957,193
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:101,420,941...101,440,302
Ensembl chr 4:101,420,872...101,438,126
JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:12829805) Ensembl
GO_Central
MGI
PMID:12829805 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:87,720,747...87,743,037
Ensembl chr 4:87,720,118...87,742,992
JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:16955138) Ensembl
GO_Central
MGI
PMID:16955138 GO_REF:0000033 GO_REF:0000107 NCBI chr18:2,885,494...2,898,758
Ensembl chr18:2,885,612...2,898,767
JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
ISS
IEA
IBA
ISO
(PMID:16955138) UniProt
Ensembl
GO_Central
MGI
PMID:16955138 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr15:23,676,684...23,699,591
Ensembl chr15:23,676,683...23,699,582
JBrowse link
G LBR lamin B receptor involved_in IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr10:13,389,896...13,416,831
Ensembl chr10:13,386,946...13,416,759
JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25147230), (PMID:29599133) Ensembl
MGI
PMID:25147230 PMID:29599133 GO_REF:0000107 NCBI chr14:101,131,372...101,254,739
Ensembl chr14:101,126,257...101,193,614
JBrowse link
G LOC100625049 isopentenyl-diphosphate Delta-isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:68,534,520...68,539,279
Ensembl chr10:68,534,796...68,539,280
JBrowse link
G LOC110255234 liver carboxylesterase-like involved_in IEA Ensembl GO_REF:0000107
G LOC110260333 hydroxymethylglutaryl-CoA synthase, mitochondrial-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405
JBrowse link
G LSS lanosterol synthase involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:1429550 PMID:16440058 GO_REF:0000033 GO_REF:0000107 RGD:1626611 RGD:2316919
G MSMO1 methylsterol monooxygenase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 8:43,726,834...43,745,784
Ensembl chr 8:43,726,858...43,744,713
JBrowse link
G MVD mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 6:1,008,100...1,014,303
Ensembl chr 6:1,008,100...1,014,303
JBrowse link
G MVK mevalonate kinase involved_in IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr14:41,320,790...41,357,437
Ensembl chr14:41,281,673...41,357,368
JBrowse link
G NPC1L1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chr18:50,726,854...50,757,676
Ensembl chr18:50,726,922...50,757,649
JBrowse link
G PMVK phosphomevalonate kinase involved_in IEA
IBA
ISS
(PMID:8663599) InterPro
UniProt
GO_Central
Ensembl
PMID:8663599 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:94,861,500...94,913,743
Ensembl chr 4:94,861,712...94,874,771
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,324...25,783,707
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,784...155,754,278
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:9329978) Ensembl
MGI
PMID:9329978 GO_REF:0000107 NCBI chr12:60,733,967...60,750,951
Ensembl chr12:60,733,907...60,751,267
JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 involved_in IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:7,076,778...7,081,502
Ensembl chr 2:7,075,068...7,081,432
JBrowse link
G TTC22 tetratricopeptide repeat domain 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:157,555,204...157,579,299
Ensembl chr 6:157,556,184...157,579,161
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 involved_in ISO
IBA
RGD
GO_Central
PMID:7581240 GO_REF:0000033 RGD:2316902 NCBI chr 9:72,057,506...72,079,587
Ensembl chr 9:72,057,511...72,079,444
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHCR24 24-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:157,483,794...157,519,060
Ensembl chr 6:157,483,783...157,519,061
JBrowse link
G TTC22 tetratricopeptide repeat domain 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:157,555,204...157,579,299
Ensembl chr 6:157,556,184...157,579,161
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHCR7 7-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:2,377,352...2,391,846
Ensembl chr 2:2,377,416...2,391,447
JBrowse link
G SC5D sterol-C5-desaturase involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:7961720 GO_REF:0000033 GO_REF:0000107 RGD:2316911 NCBI chr 9:48,357,115...48,372,391
Ensembl chr 9:48,357,165...48,372,386
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1H calcium voltage-gated channel subunit alpha1 H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:40,637,420...40,694,616
Ensembl chr 3:40,637,427...40,695,177
JBrowse link
G CYP11B2 cytochrome P450 family 11 subfamily B member 2 involved_in
NOT|involved_in
ISO (PMID:19342457)
(PMID:9703385)
UniProt
BHF-UCL
PMID:9703385 PMID:19342457 NCBI chr 4:1,365,725...1,373,138 JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHX1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chr10:13,757,489...13,773,071
Ensembl chr10:13,751,881...13,773,072
JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHDDS dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:83,823,262...83,855,101
Ensembl chr 6:83,823,229...83,857,092
JBrowse link
G DHRSX dehydrogenase/reductase X-linked involved_in ISO (PMID:38821050) UniProt PMID:38821050 NCBI chr  Y:5,248,447...5,374,873 JBrowse link
G LOC100525350 polyprenol reductase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:42,024,352...42,049,209 JBrowse link
G NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:25066056) MGI
GO_Central
Ensembl
InterPro
PMID:25066056 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:44,156,771...44,186,224
Ensembl chr 1:44,156,778...44,186,194
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:17545671) UniProt
MGI
Ensembl
PMID:17545671 GO_REF:0000024 GO_REF:0000107 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G LEP leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G PGP phosphoglycolate phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,776,815...39,779,669
Ensembl chr 3:39,762,608...39,778,011
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11792850) Ensembl
MGI
PMID:11792850 GO_REF:0000107 NCBI chr17:57,930,507...57,936,523
Ensembl chr17:57,930,432...57,936,522
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:75,187,195...75,197,613
Ensembl chr 7:75,187,197...75,197,733
JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,516
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIDEA cell death inducing DFFA like effector a involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:97,253,074...97,268,355
Ensembl chr 6:97,253,074...97,267,405
JBrowse link
G IMPA1 inositol monophosphatase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:54,935,838...54,968,672
Ensembl chr 4:54,935,860...54,984,238
JBrowse link
G IMPA2 inositol monophosphatase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:97,280,008...97,309,729
Ensembl chr 6:97,280,010...97,309,745
JBrowse link
G ISYNA1 inositol-3-phosphate synthase 1 involved_in IEA
IBA
UniProt
GO_Central
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:59,363,672...59,367,003
Ensembl chr 2:59,363,716...59,367,002
JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IP6K1 inositol hexakisphosphate kinase 1 involved_in IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr13:32,253,515...32,320,005
Ensembl chr13:32,253,515...32,319,988
JBrowse link
G IP6K2 inositol hexakisphosphate kinase 2 involved_in IEA
IBA
InterPro
GO_Central
Ensembl
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr13:31,379,516...31,406,989
Ensembl chr13:31,379,521...31,406,911
JBrowse link
G IP6K3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(PMID:11502751) MGI
GO_Central
Ensembl
InterPro
PMID:11502751 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:29,938,779...29,961,520
Ensembl chr 7:29,931,925...29,961,466
JBrowse link
G IPMK inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15939867) InterPro
MGI
PMID:15939867 GO_REF:0000002 NCBI chr14:92,383,471...92,428,732
Ensembl chr14:92,383,517...92,428,731
JBrowse link
G IPPK inositol-pentakisphosphate 2-kinase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:42,308,001...42,368,162
Ensembl chr 3:42,308,005...42,368,118
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A involved_in IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 1:129,867,261...129,877,762
Ensembl chr 1:129,867,642...129,875,639
JBrowse link
G ITPKB inositol-trisphosphate 3-kinase B involved_in IEA InterPro GO_REF:0000002 NCBI chr10:14,362,883...14,469,586 JBrowse link
G ITPKC inositol-trisphosphate 3-kinase C involved_in IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 6:48,943,207...48,962,101
Ensembl chr 6:48,943,357...48,961,438
JBrowse link
G PPIP5K1 diphosphoinositol pentakisphosphate kinase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:127,865,487...127,915,501
Ensembl chr 1:127,865,562...127,915,451
JBrowse link
G PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:108,596,733...108,690,859
Ensembl chr 2:108,585,959...108,690,858
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLCG1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chr17:43,810,003...43,844,553
Ensembl chr17:43,810,048...43,844,554
JBrowse link
G PLCG2 phospholipase C gamma 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9013981) Ensembl
MGI
PMID:9013981 GO_REF:0000107 NCBI chr 6:6,433,146...6,603,092
Ensembl chr 6:6,433,153...6,603,060
JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of ISO (PMID:11371619) MGI PMID:11371619 NCBI chr13:168,510,671...168,530,394
Ensembl chr13:168,510,774...168,529,345
JBrowse link
G PTAFR platelet activating factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9013981) Ensembl
MGI
PMID:9013981 GO_REF:0000107 NCBI chr 6:85,235,390...85,272,360
Ensembl chr 6:85,235,394...85,261,760
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chr 6:159,191,045...159,314,985 JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195
JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,344,924...25,468,430
Ensembl chr 7:25,344,822...25,470,470
JBrowse link
G DKK3 dickkopf WNT signaling pathway inhibitor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,385,244...47,444,664
Ensembl chr 2:47,385,192...47,444,660
JBrowse link
G LOC100621006 RE1-silencing transcription factor-like involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G REST RE1 silencing transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chr 5:23,053,129...23,058,865
Ensembl chr 5:23,053,892...23,058,470
JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) BHF-UCL PMID:15947108 NCBI chr 4:124,619,887...124,629,638
Ensembl chr 4:124,621,261...124,629,638
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:15243130) BHF-UCL PMID:15243130 NCBI chr 8:118,391,010...118,478,927
Ensembl chr 8:118,390,638...118,506,691
JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO
IEA
RGD
Ensembl
PMID:9225228 GO_REF:0000107 RGD:10059686 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330
JBrowse link
G C3H7orf50 chromosome 3 C7orf50 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:650,701...745,370
Ensembl chr 3:650,704...662,486
JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,643,722...48,662,648
Ensembl chr15:48,643,724...48,662,536
JBrowse link
G INSIG1 insulin induced gene 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,885,494...2,898,758
Ensembl chr18:2,885,612...2,898,767
JBrowse link
G LOC110258909 isopentenyl-diphosphate Delta-isomerase 1-like acts_upstream_of_or_within ISO (PMID:17202134) MGI PMID:17202134
G MIR185 microRNA mir-185 acts_upstream_of ISO (PMID:24296663)
(PMID:23951060)
BHF-UCL PMID:23951060 PMID:24296663 NCBI chr14:51,449,903...51,449,978
Ensembl chr14:51,449,903...51,449,978
JBrowse link
G MIR342 microRNA mir-342 acts_upstream_of ISO (PMID:23951060) BHF-UCL PMID:23951060 NCBI chr 7:121,021,761...121,021,840
Ensembl chr 7:121,021,761...121,021,840
JBrowse link
G MIR98 microRNA mir-98 involved_in ISO (PMID:30195495) BHF-UCL PMID:30195495 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460
JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195
JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,344,924...25,468,430
Ensembl chr 7:25,344,822...25,470,470
JBrowse link
G DKK3 dickkopf WNT signaling pathway inhibitor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,385,244...47,444,664
Ensembl chr 2:47,385,192...47,444,660
JBrowse link
G LOC100621006 RE1-silencing transcription factor-like involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G REST RE1 silencing transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISYNA1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chr 2:59,363,672...59,367,003
Ensembl chr 2:59,363,716...59,367,002
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLEK pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,877,741...73,910,163
Ensembl chr 3:73,877,743...73,906,667
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chr14:97,558,531...98,793,080
Ensembl chr14:97,558,533...98,793,010
JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,175...273,225,552
JBrowse link
G MOXD1 monooxygenase DBH like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:31,282,491...31,367,589
Ensembl chr 1:31,282,506...31,367,779
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER3 alkaline ceramidase 3 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 9:10,985,078...11,167,386
Ensembl chr 9:10,967,857...11,162,502
JBrowse link
polyprenol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHDDS dehydrodolichyl diphosphate synthase subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:83,823,262...83,855,101
Ensembl chr 6:83,823,229...83,857,092
JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270
JBrowse link
G DAB2 DAB adaptor protein 2 ISO RGD PMID:17303656 RGD:7243836 NCBI chr16:24,590,638...24,776,937
Ensembl chr16:24,590,645...24,646,122
JBrowse link
G WNT4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chr 6:80,110,238...80,138,165 JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chr13:205,561,897...205,628,428
Ensembl chr13:205,561,951...205,628,425
JBrowse link
G ABCG4 ATP binding cassette subfamily G member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,364,546...46,380,545
Ensembl chr 9:46,364,936...46,380,544
JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 4:74,343,101...74,372,628
Ensembl chr 4:74,343,123...74,372,621
JBrowse link
G FDPS farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chr 4:94,500,140...94,514,820
Ensembl chr 4:94,500,141...94,518,408
JBrowse link
G FGF1 fibroblast growth factor 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:144,133,846...144,241,345
Ensembl chr 2:144,133,392...144,241,323
JBrowse link
G GNAI1 G protein subunit alpha i1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:100,187,878...100,272,274
Ensembl chr 9:100,187,843...100,272,532
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chr14:50,083,079...50,165,528
Ensembl chr14:50,082,896...50,165,513
JBrowse link
G MBTPS2 membrane bound transcription factor peptidase, site 2 involved_in ISO (PMID:11163209) UniProt PMID:11163209 NCBI chr  X:18,013,360...18,054,250 JBrowse link
G MIR96 microRNA mir-96 involved_in
acts_upstream_of
ISO (PMID:23823476)
(PMID:30460077)
BHF-UCL PMID:23823476 PMID:30460077 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590
JBrowse link
G NPY1R neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chr 8:52,152,649...52,163,080
Ensembl chr 8:52,152,646...52,162,328
JBrowse link
G PAQR3 progestin and adipoQ receptor family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,646,626...138,670,166
Ensembl chr 8:138,646,625...138,669,115
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,551
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) UniProt PMID:33942715 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,514...4,883,392
JBrowse link
G SCAP SREBF chaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:30,253,262...30,320,625
Ensembl chr13:30,253,268...30,320,526
JBrowse link
G SCP2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chr 6:159,191,045...159,314,985 JBrowse link
G SEC14L2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chr14:47,369,663...47,391,335
Ensembl chr14:47,370,055...47,392,499
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:16046411)
(PMID:9329978)
Ensembl
MGI
UniProt
PMID:9329978 PMID:16046411 GO_REF:0000024 GO_REF:0000107 NCBI chr12:60,733,967...60,750,951
Ensembl chr12:60,733,907...60,751,267
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:6,719,484...6,784,724
Ensembl chr 5:6,719,490...6,784,671
JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chr 6:80,110,238...80,138,165 JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCYAP1R1 ADCYAP receptor type I ISO RGD PMID:8396727 PMID:8943280 RGD:2315982 RGD:631732 NCBI chr18:41,915,180...41,972,327
Ensembl chr18:41,917,428...41,972,301
JBrowse link
G AVPR1B vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,769,472...66,776,916
Ensembl chr 9:66,772,591...66,776,931
JBrowse link
G CD244 CD244 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:89,668,221...89,700,974
Ensembl chr 4:89,668,239...89,700,972
JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chr 1:7,527,566...7,542,110
Ensembl chr 1:7,527,861...7,528,838
JBrowse link
G NTSR1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chr17:61,989,601...62,038,299
Ensembl chr17:61,989,402...62,033,548
JBrowse link
G PTAFR platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chr 6:85,235,390...85,272,360
Ensembl chr 6:85,235,394...85,261,760
JBrowse link
G PTH parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415
JBrowse link
G PTH1R parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chr13:29,749,940...29,775,361
Ensembl chr13:29,753,326...29,775,348
JBrowse link
G SNCA synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:129,247,724...129,388,307
Ensembl chr 8:129,248,819...129,271,128
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPER1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:711,427...715,982
Ensembl chr 3:712,160...715,980
JBrowse link
G LHCGR luteinizing hormone/choriogonadotropin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,964,415...92,023,821
Ensembl chr 3:91,964,415...92,021,398
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chr 5:11,365,603...11,456,475
Ensembl chr 5:11,360,660...11,456,472
JBrowse link
G P2RY1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chr13:92,991,150...92,997,702
Ensembl chr13:92,991,152...92,997,700
JBrowse link
G P2RY6 pyrimidinergic receptor P2Y6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:7,708,452...7,759,721
Ensembl chr 9:7,749,375...7,759,721
JBrowse link
G PLCD1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chr13:22,851,581...22,872,950
Ensembl chr13:22,851,584...22,872,992
JBrowse link
G POU1F1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:11371619) MGI PMID:11371619 NCBI chr13:168,510,671...168,530,394
Ensembl chr13:168,510,774...168,529,345
JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCN2 chloride voltage-gated channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:122,234,731...122,249,889
Ensembl chr13:122,234,736...122,249,867
JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) ARUK-UCL PMID:21810484
G APOB apolipoprotein B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16455790) Ensembl
MGI
PMID:16455790 GO_REF:0000107 NCBI chr 3:117,250,096...117,316,200
Ensembl chr 3:117,250,096...117,316,200
JBrowse link
G AQP8 aquaporin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:21,493,564...21,503,778
Ensembl chr 3:21,491,719...21,503,863
JBrowse link
G DHCR7 7-dehydrocholesterol reductase ISO RGD PMID:10329655 RGD:632010 NCBI chr 2:2,377,352...2,391,846
Ensembl chr 2:2,377,416...2,391,447
JBrowse link
G ERLIN2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,643,722...48,662,648
Ensembl chr15:48,643,724...48,662,536
JBrowse link
G GPR146 G protein-coupled receptor 146 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chr 3:682,368...695,710 JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,707,674...63,746,369
Ensembl chr 5:63,708,020...63,746,103
JBrowse link
G PEX2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chr 4:59,252,330...59,270,117
Ensembl chr 4:59,252,337...59,270,116
JBrowse link
G SCAP SREBF chaperone involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:16054043) Ensembl
MGI
GO_Central
PMID:16054043 GO_REF:0000033 GO_REF:0000107 NCBI chr13:30,253,262...30,320,625
Ensembl chr13:30,253,268...30,320,526
JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGKQ diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:313,325...325,089
Ensembl chr 8:313,329...325,095
JBrowse link
G H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,666,348...69,700,303
Ensembl chr 6:69,666,601...69,700,298
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 ISO RGD PMID:20705669 RGD:5509896 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,516,947...9,597,976
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:20705669 RGD:5509896 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,439...5,227,758
JBrowse link
G NTSR1 neurotensin receptor 1 ISO RGD PMID:12869647 RGD:596992334 NCBI chr17:61,989,601...62,038,299
Ensembl chr17:61,989,402...62,033,548
JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,684,036...14,752,310
JBrowse link
sphinganine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:19416652) MGI PMID:19416652 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9363775) Ensembl
MGI
PMID:9363775 GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905
JBrowse link
sphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 acts_upstream_of_positive_effect
involved_in
ISO
IEA
(PMID:26510981) ARUK-UCL
Ensembl
PMID:26510981 GO_REF:0000107
G ACER1 alkaline ceramidase 1 involved_in IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:72,704,603...72,767,474
Ensembl chr 2:72,743,643...72,769,570
JBrowse link
G ACER2 alkaline ceramidase 2 involved_in IEA
IBA
Ensembl
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:203,387,669...203,415,018
Ensembl chr 1:203,384,726...203,414,972
JBrowse link
G ACER3 alkaline ceramidase 3 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chr 9:10,985,078...11,167,386
Ensembl chr 9:10,967,857...11,162,502
JBrowse link
G AGK acylglycerol kinase involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:8,263,761...8,369,060
Ensembl chr18:8,263,896...8,368,972
JBrowse link
G ASAH1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,712,048...5,749,811
Ensembl chr17:5,712,058...5,758,821
JBrowse link
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr14:99,018,111...99,141,374
Ensembl chr14:99,025,005...99,129,100
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745
JBrowse link
G SPHK1 sphingosine kinase 1 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr12:5,114,946...5,122,580
Ensembl chr12:5,114,947...5,120,083
JBrowse link
G SPHK2 sphingosine kinase 2 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 6:53,982,911...53,986,779
Ensembl chr 6:53,979,012...53,986,768
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:16216550) Ensembl
MGI
GO_Central
PMID:16216550 GO_REF:0000033 GO_REF:0000107 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,972...3,138,103
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:16216550) Ensembl
MGI
GO_Central
PMID:16216550 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,905
JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,264
JBrowse link
G SPTSSA serine palmitoyltransferase small subunit A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:65,302,887...65,325,877
Ensembl chr 7:65,302,858...65,326,728
JBrowse link
G SPTSSB serine palmitoyltransferase small subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:101,023,238...101,059,917
Ensembl chr13:101,023,812...101,059,885
JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR dihydrofolate reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G GCH1 GTP cyclohydrolase 1 involved_in IEA
IBA
UniProt
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:184,201,232...184,264,060
Ensembl chr 1:184,199,679...184,257,315
JBrowse link
G PCBD1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr14:73,769,339...73,807,278
Ensembl chr14:73,800,765...73,807,281
JBrowse link
G PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:137,082,920...137,135,175 JBrowse link
G PTS 6-pyruvoyltetrahydropterin synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9894812) UniProt
MGI
Ensembl
InterPro
PMID:9894812 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:39,920,157...39,927,804
Ensembl chr 9:39,920,273...39,928,634
JBrowse link
G QDPR quinoid dihydropteridine reductase involved_in ISO
IBA
ISS
IEA
RGD
GO_Central
UniProt
PMID:660556 PMID:9235988 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 RGD:4139903 RGD:5128582 NCBI chr 8:12,529,500...12,549,471
Ensembl chr 8:12,529,512...12,549,603
JBrowse link
G SPR sepiapterin reductase involved_in ISO
IBA
IEA
RGD
GO_Central
InterPro
PMID:2179471 GO_REF:0000002 GO_REF:0000033 RGD:1600056 NCBI chr 3:69,889,448...69,894,747
Ensembl chr 3:69,889,452...69,894,680
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Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18932
    cellular process 18474
      metabolic process 11708
        small molecule metabolic process 1694
          alcohol metabolic process 348
            alcohol biosynthetic process 153
              amino acid catabolic process to alcohol via Ehrlich pathway + 0
              cyclopentanol biosynthetic process 0
              fatty alcohol biosynthetic process + 0
              fonsecin biosynthetic process 0
              monensin A biosynthetic process 0
              negative regulation of alcohol biosynthetic process + 19
              octopamine biosynthetic process 2
              patulin biosynthetic process + 0
              polyol biosynthetic process + 70
              polyprenol biosynthetic process + 4
              positive regulation of alcohol biosynthetic process + 37
              prenol biosynthetic process 0
              primary alcohol biosynthetic process + 14
              regulation of alcohol biosynthetic process + 68
              secondary alcohol biosynthetic process + 63
              tertiary alcohol biosynthetic process + 10
paths to the root