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ONTOLOGY REPORT - ANNOTATIONS


Term:alcohol catabolic process
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Accession:GO:0046164 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom.
Synonyms:exact_synonym: alcohol breakdown;   alcohol catabolism;   alcohol degradation



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alcohol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide acts_upstream_of_or_within ISO (PMID:10514444) RGD PMID:10514444 NCBI chr 2:229,622,092...229,640,120
Ensembl chr 2:226,947,466...226,987,591
JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in ISO
IEA
(PMID:7508385)
GO_REF:0000107
RGD
Ensembl
PMID:7508385 GO_REF:0000107 NCBI chr 4:67,121,288...67,154,543
Ensembl chr 4:66,154,248...66,186,372
JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:9826706) RGD PMID:9826706 NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
GO_REF:0000041
(PMID:9660774)
UniProt
Ensembl
RGD
PMID:9660774 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:83,712,402...83,743,222
Ensembl chr 9:76,264,860...76,294,551
JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO (PMID:10748047) RGD PMID:10748047 NCBI chr 9:24,727,817...24,804,060
Ensembl chr 9:17,230,455...17,306,775
JBrowse link
G Cyp46a1 cytochrome P450, family 46, subfamily a, polypeptide 1 involved_in ISO
IBA
(PMID:14640697), (PMID:18621681), (PMID:25017465)
(PMID:10377398), (PMID:20193040)
GO_REF:0000033
RGD
GO_Central
PMID:10377398 PMID:14640697 PMID:18621681 PMID:20193040 PMID:25017465 GO_REF:0000033 NCBI chr 6:133,011,948...133,039,167
Ensembl chr 6:127,243,315...127,274,760
JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
PMID:1694852
GO_REF:0000041
(PMID:11279518), (PMID:15845870)
UniProt
RGD
PMID:11279518 PMID:15845870 PMID:1694852 GO_REF:0000041, RGD:70534 NCBI chr 5:24,174,505...24,184,202
Ensembl chr 5:19,376,974...19,386,688
JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IDA RGD PMID:16081591 RGD:1599972 NCBI chr 1:191,842,688...191,845,919
Ensembl chr 1:182,412,151...182,415,442
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1928989 (PMID:10559220), (PMID:11278646)
Ensembl
RGD
PMID:10559220 PMID:11278646 GO_REF:0000107 NCBI chr12:36,957,302...37,023,982
Ensembl chr12:31,296,156...31,362,647
JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt3 nudix hydrolase 3 involved_in ISO
ISS
(PMID:10585413)
GO_REF:0000024
RGD
UniProt
PMID:10585413 GO_REF:0000024 NCBI chr20:5,636,184...5,688,770
Ensembl chr20:5,634,349...5,686,874
JBrowse link
ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2180100 (PMID:10358022), (PMID:518534)
GO_REF:0000107
RGD
Ensembl
PMID:518534 PMID:10358022 GO_REF:0000107 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892
JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide IDA RGD PMID:18207224 RGD:5129089 NCBI chr 2:229,648,557...229,660,964
Ensembl chr 2:226,947,466...226,987,591
JBrowse link
G Adh6 alcohol dehydrogenase 6 (class V) involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534
JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180102 (PMID:10358022)
Ensembl
RGD
PMID:10358022 GO_REF:0000107 NCBI chr 2:229,422,125...229,436,584
Ensembl chr 2:226,741,788...226,763,182
JBrowse link
G Aldh1a7 aldehyde dehydrogenase family 1, subfamily A7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:218,201,443...218,241,410
Ensembl chr 1:218,201,472...218,248,906
JBrowse link
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:34,901,219...34,982,521
JBrowse link
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:210,574,545...210,605,188
Ensembl chr 1:201,145,309...201,163,921
JBrowse link
G Sult1a1 sulfotransferase family 1A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:190,702,592...190,706,112
Ensembl chr 1:181,272,023...181,275,562
JBrowse link
G Sult1b1 sulfotransferase family 1B member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr14:20,771,917...20,784,665
Ensembl chr14:20,492,708...20,505,483
JBrowse link
G Sult1e1 sulfotransferase family 1E member 1 involved_in ISO
IEA
(PMID:23207770)
GO_REF:0000107
RGD
Ensembl
PMID:23207770 GO_REF:0000107 NCBI chr14:20,700,444...20,718,719
Ensembl chr14:20,422,324...20,439,275
JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 involved_in ISO (PMID:23207770) RGD PMID:23207770 NCBI chr 1:84,582,011...84,639,001
Ensembl chr 1:74,911,100...75,508,134
JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr 4:64,005,632...64,027,860
Ensembl chr 4:63,040,169...63,053,852
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr17:71,020,884...71,037,779
Ensembl chr17:66,110,963...66,127,873
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gk glycerol kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:54,106,708...54,189,940
Ensembl chr  X:50,163,123...50,238,631
JBrowse link
G Gk2 glycerol kinase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473
JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:96,682,469...96,751,407
Ensembl chr 8:96,682,470...96,749,166
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:62,209,432...62,346,590
Ensembl chr 3:41,801,930...41,936,901
JBrowse link
G Gykl1 glycerol kinase-like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:46,124,207...46,126,126
Ensembl chr18:46,124,199...46,127,077
JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:216,664,446...216,677,815
Ensembl chr 1:207,236,557...207,252,737
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:159,301,558...159,305,088
Ensembl chr 4:157,615,386...157,619,541
JBrowse link
G Tpi1l1 triosephosphate isomerase 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:31,923,596...31,931,244
Ensembl chr 8:23,647,764...23,655,504
JBrowse link
G Tpi1l2 triosephosphate isomerase 1 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:27,307,380...28,230,998
Ensembl chr17:27,101,431...27,102,809
JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) RGD PMID:18215067 NCBI chr 3:142,102,873...142,281,527
Ensembl chr 3:121,771,836...121,828,721
JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in IEA
IBA
ISS
ISO
GO_REF:0000104
GO_REF:0000033
GO_REF:0000024
(PMID:11716759)
(PMID:18364358)
UniProt
GO_Central
RGD
PMID:11716759 PMID:18364358 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:122,284,660...122,287,158
Ensembl chr 7:120,405,031...120,407,537
JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:15707678 RGD:9743914 NCBI chr 3:187,983,778...188,033,934
Ensembl chr 3:167,606,215...167,656,377
JBrowse link
G Pten phosphatase and tensin homolog IDA RGD PMID:18056380 RGD:2292524 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Synj2 synaptojanin 2 IDA RGD PMID:9388224 RGD:69390 NCBI chr 1:48,923,742...49,027,153
Ensembl chr 1:46,518,709...46,633,687
JBrowse link
polyprenol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO
ISS
IEA
(PMID:20637498)
GO_REF:0000024
GO_REF:0000104
RGD
UniProt
PMID:20637498 GO_REF:0000024 GO_REF:0000104 NCBI chr14:32,400,603...32,414,987
Ensembl chr14:32,046,408...32,060,747
JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO
IBA
IEA
(PMID:12962626), (PMID:32367058), (PMID:3365415), (PMID:6870831), (PMID:8487505)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000104
RGD
GO_Central
Ensembl
UniProt
PMID:3365415 PMID:6870831 PMID:8487505 PMID:12962626 PMID:32367058 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 3:129,638,282...129,669,727
Ensembl chr 3:109,184,676...109,216,133
JBrowse link
xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO
IEA
(PMID:8487505)
GO_REF:0000107
RGD
Ensembl
PMID:8487505 GO_REF:0000107 NCBI chr 3:129,638,282...129,669,727
Ensembl chr 3:109,184,676...109,216,133
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      metabolic process 12160
        small molecule metabolic process 1917
          alcohol metabolic process 397
            alcohol catabolic process 40
              (17Z)-protosta-17(20),24-dien-3beta-ol catabolic process 0
              3-(3-hydroxy)phenylpropionate catabolic process 0
              abscisic acid catabolic process 0
              acetoin catabolic process 0
              cholesterol catabolic process 8
              cis-abienol catabolic process 0
              cyclopentanol catabolic process 0
              ecdysone catabolic process 0
              fatty alcohol catabolic process + 0
              fonsecin catabolic process 0
              monensin A catabolic process 0
              negative regulation of alcohol catabolic process 0
              neosartoricin catabolic process 0
              octopamine catabolic process 0
              polyol catabolic process + 15
              polyprenol catabolic process + 3
              positive regulation of alcohol catabolic process + 0
              prenol catabolic process 0
              primary alcohol catabolic process + 15
              regulation of alcohol catabolic process + 0
              rhodopsin catabolic process 0
              tetracenomycin C catabolic process 0
              vitamin D3 catabolic process 0
paths to the root