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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytic vesicle
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Accession:GO:0045335 term browser browse the term
Definition:A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: phagosome
 xref: Wikipedia:Phagosome
 never_in_taxon: NCBITaxon:4751 ! Fungi

GViewer not supported for the selected species.

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phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:7,177,887...7,312,660
Ensembl chrNW_004936559:7,177,904...7,312,741 		JBrowse link
G Actg1 actin gamma 1 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936594:5,170,711...5,173,251
Ensembl chrNW_004936594:5,170,711...5,173,247 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,493,823...2,676,868
Ensembl chrNW_004936562:2,493,774...2,676,912 		JBrowse link
G Anxa11 annexin A11 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:231,294...275,138
Ensembl chrNW_004936521:228,298...275,151 		JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
G Atg14 autophagy related 14 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:155,709...195,860
Ensembl chrNW_004936495:154,593...195,917 		JBrowse link
G Becn1 beclin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
G Capg capping actin protein, gelsolin like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936712:1,793,666...1,803,621
Ensembl chrNW_004936712:1,793,480...1,806,602 		JBrowse link
G Cdc42 cell division cycle 42 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936474:7,556,765...7,598,687 JBrowse link
G Cdc42ep4 CDC42 effector protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:943,754...963,018
Ensembl chrNW_004936655:961,017...962,084 		JBrowse link
G Clcn3 chloride voltage-gated channel 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:1,678,610...1,760,099
Ensembl chrNW_004936516:1,678,653...1,760,294 		JBrowse link
G Coro1a coronin 1A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,338,542...12,344,236
Ensembl chrNW_004936501:12,338,542...12,344,265 		JBrowse link
G Ctss cathepsin S located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:963,176...991,732
Ensembl chrNW_004936580:963,153...991,442 		JBrowse link
G Cybb cytochrome b-245 beta chain located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:4,631,750...4,676,686
Ensembl chrNW_004936502:4,635,149...4,676,904 		JBrowse link
G Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:7,193,726...7,225,415
Ensembl chrNW_004936493:7,193,709...7,228,625 		JBrowse link
G Evl Enah/Vasp-like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936604:3,720,038...3,819,928
Ensembl chrNW_004936604:3,719,976...3,822,334 		JBrowse link
G Flnb filamin B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:8,268,326...8,413,955
Ensembl chrNW_004936473:8,268,496...8,411,975 		JBrowse link
G Fmnl1 formin like 1 located_in ISO (PMID:21148482) UniProt PMID:21148482 NCBI chrNW_004936541:1,503,378...1,527,404
Ensembl chrNW_004936541:1,503,586...1,527,067 		JBrowse link
G Gsn gelsolin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:9,749,755...9,802,787
Ensembl chrNW_004936487:9,764,944...9,802,841 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18414680 RGD:2316597 NCBI chrNW_004936515:6,030,402...6,051,161 JBrowse link
G Kif16b kinesin family member 16B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936485:3,443,878...3,728,613
Ensembl chrNW_004936485:3,443,878...3,726,174 		JBrowse link
G Kif5b kinesin family member 5B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:780,074...823,858
Ensembl chrNW_004936574:779,777...823,970 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:377,359...389,121
Ensembl chrNW_004936472:378,173...389,381 		JBrowse link
G LOC101961439 twinfilin-2 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G LOC101972667 immunity related GTPase M located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Mpeg1 macrophage expressed 1 located_in ISO (PMID:26402460) UniProt PMID:26402460 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Mtor mechanistic target of rapamycin kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342 		JBrowse link
G Myh9 myosin heavy chain 9 located_in ISO RGD PMID:19117932 RGD:6902913 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G Myo18a myosin XVIIIA located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936538:5,257,165...5,351,757
Ensembl chrNW_004936538:5,258,401...5,344,669 		JBrowse link
G Myo1c myosin IC located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,614,985...7,639,603
Ensembl chrNW_004936538:7,611,008...7,639,581 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422 		JBrowse link
G Pld4 phospholipase D family member 4 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936621:515,710...523,317
Ensembl chrNW_004936621:515,636...523,359 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:26,089,216...26,111,245
Ensembl chrNW_004936471:26,088,852...26,113,433 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,198,659...5,210,430
Ensembl chrNW_004936588:5,198,394...5,214,603 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:16,883,972...16,919,539
Ensembl chrNW_004936491:16,886,065...16,919,545 		JBrowse link
G Rab12 RAB12, member RAS oncogene family located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936670:2,315,930...2,338,489
Ensembl chrNW_004936670:2,315,442...2,338,509 		JBrowse link
G Rab14 RAB14, member RAS oncogene family located_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936487:9,675,517...9,699,469
Ensembl chrNW_004936487:9,673,487...9,690,654 		JBrowse link
G Rab20 RAB20, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:2,234,826...2,264,613
Ensembl chrNW_004936472:2,234,873...2,264,622 		JBrowse link
G Rab22a RAB22A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:907,359...963,490
Ensembl chrNW_004936530:907,400...963,488 		JBrowse link
G Rab23 RAB23, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:4,095,829...4,127,714
Ensembl chrNW_004936476:4,095,329...4,127,701 		JBrowse link
G Rab29 RAB29, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:6,673,092...6,679,715
Ensembl chrNW_004936557:6,673,065...6,683,468 		JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:1,628,379...1,673,150
Ensembl chrNW_004936626:1,628,451...1,660,510 		JBrowse link
G Rab32 RAB32, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936489:35,620...51,809 JBrowse link
G Rab34 RAB34, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,923,740...4,928,798
Ensembl chrNW_004936538:4,923,424...4,928,809 		JBrowse link
G Rab38 RAB38, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936736:1,304,290...1,360,412
Ensembl chrNW_004936736:1,304,185...1,361,221 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:750,940...778,432
Ensembl chrNW_004936551:746,936...778,432 		JBrowse link
G Rab43 RAB43, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:176,772...180,387
Ensembl chrNW_004936798:176,304...178,725 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936557:6,504,562...6,519,219
Ensembl chrNW_004936557:6,504,509...6,519,219 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:4,385,788...4,403,393
Ensembl chrNW_004936596:4,385,772...4,403,441 		JBrowse link
G Rab8b RAB8B, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:23,768,460...23,832,072
Ensembl chrNW_004936471:23,768,415...23,834,129 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:3,253,631...3,275,078
Ensembl chrNW_004936470:3,253,652...3,275,075 		JBrowse link
G Rab9b RAB9B, member RAS oncogene family located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936499:10,501,837...10,506,793
Ensembl chrNW_004936499:10,437,611...10,504,320 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004936690:275,840...363,752
Ensembl chrNW_004936690:315,752...366,413 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936740:55,941...92,100
Ensembl chrNW_004936740:55,941...92,100 		JBrowse link
G Snx3 sorting nexin 3 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936564:4,472,171...4,520,732
Ensembl chrNW_004936564:4,471,652...4,520,785 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,096,258...6,338,024
Ensembl chrNW_004936557:6,096,246...6,338,108 		JBrowse link
G Stx12 syntaxin 12 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,019,099...12,057,028
Ensembl chrNW_004936474:12,019,041...12,060,213 		JBrowse link
G Stx4 syntaxin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,401,095...13,408,316
Ensembl chrNW_004936501:13,401,989...13,408,325 		JBrowse link
G Stx6 syntaxin 6 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:8,362,059...8,405,228
Ensembl chrNW_004936481:8,362,050...8,399,737 		JBrowse link
G Stx8 syntaxin 8 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:2,328,763...2,578,788
Ensembl chrNW_004936595:2,328,740...2,578,791 		JBrowse link
G Stxbp1 syntaxin binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,300,758...15,367,475
Ensembl chrNW_004936487:15,300,952...15,365,713 		JBrowse link
G Stxbp2 syntaxin binding protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,688,221...4,696,075
Ensembl chrNW_004936588:4,687,834...4,696,146 		JBrowse link
G Stxbp3 syntaxin binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:330,195...396,913
Ensembl chrNW_004936704:330,078...397,059 		JBrowse link
G Stxbp4 syntaxin binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:7,406,130...7,553,389
Ensembl chrNW_004936490:7,406,124...7,554,118 		JBrowse link
G Syt11 synaptotagmin 11 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
G Tlr7 toll like receptor 7 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675 		JBrowse link
G Uvrag UV radiation resistance associated located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,555,325...4,869,099
Ensembl chrNW_004936498:4,555,276...4,870,896 		JBrowse link
G Vamp3 vesicle associated membrane protein 3 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936623:2,280,534...2,287,898 JBrowse link
G Vamp4 vesicle associated membrane protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:15,480,865...15,515,851
Ensembl chrNW_004936481:15,480,879...15,516,945 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 located_in ISO (PMID:15470500) UniProt PMID:15470500 NCBI chrNW_004936958:345,055...393,384 JBrowse link
G Vamp8 vesicle associated membrane protein 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004936712:1,688,126...1,689,742
Ensembl chrNW_004936712:1,688,093...1,689,816 		JBrowse link
G Vim vimentin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:10,051,692...10,059,324
Ensembl chrNW_004936520:10,052,012...10,059,182 		JBrowse link
G Vps26b VPS26, retromer complex component B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936684:1,597,706...1,617,689
Ensembl chrNW_004936684:1,599,754...1,617,662 		JBrowse link
G Was WASP actin nucleation promoting factor located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:634,685...641,248
Ensembl chrNW_004936721:634,706...641,082 		JBrowse link
G Zdhhc5 zDHHC palmitoyltransferase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:4,839,511...4,865,406
Ensembl chrNW_004936581:4,839,511...4,865,140 		JBrowse link
G Zyx zyxin located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:823,973...833,387
Ensembl chrNW_004936527:824,489...833,005 		JBrowse link
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
G LOC101961439 twinfilin-2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G Pla2g5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chrNW_004936474:6,131,915...6,150,810
Ensembl chrNW_004936474:6,131,884...6,150,819 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,843,798...5,384,305
Ensembl chrNW_004936540:4,845,212...5,384,170 		JBrowse link
G Snx3 sorting nexin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,472,171...4,520,732
Ensembl chrNW_004936564:4,471,652...4,520,785 		JBrowse link
G Syk spleen associated tyrosine kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Syt11 synaptotagmin 11 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Syt7 synaptotagmin 7 located_in ISO (PMID:16982801) UniProt PMID:16982801 NCBI chrNW_004936581:1,516,199...1,557,992
Ensembl chrNW_004936581:1,512,855...1,559,679 		JBrowse link
G Tlr7 toll like receptor 7 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675 		JBrowse link
G Unc13b unc-13 homolog B located_in ISO (PMID:23197834) ParkinsonsUK-UCL PMID:23197834 NCBI chrNW_004936524:3,320,859...3,369,865 JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143 		JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
G Mtmr4 myotubularin related protein 4 is_active_in ISO (PMID:31543504) UniProt PMID:31543504 NCBI chrNW_004936490:4,611,350...4,638,181
Ensembl chrNW_004936490:4,611,517...4,638,511 		JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:1,628,379...1,673,150
Ensembl chrNW_004936626:1,628,451...1,660,510 		JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa3 annexin A3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:2,153,752...2,216,498
Ensembl chrNW_004936676:2,153,689...2,216,627 		JBrowse link
G Clec4e C-type lectin domain family 4 member E is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936858:316,954...321,668
Ensembl chrNW_004936858:316,954...321,668 		JBrowse link
G Coro1a coronin 1A located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936501:12,338,542...12,344,236
Ensembl chrNW_004936501:12,338,542...12,344,265 		JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,581,409...3,609,714
Ensembl chrNW_004936558:3,579,341...3,609,789 		JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936474:20,028,575...20,083,931
Ensembl chrNW_004936474:20,028,585...20,083,906 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
G LOC101956844 HLA class I histocompatibility antigen, B alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004937082:108,444...111,916 JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein located_in ISO (PMID:10485905) UniProt PMID:10485905 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G LOC101959493 HLA class I histocompatibility antigen, alpha chain G-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936837:157,914...168,538 JBrowse link
G LOC101961596 patr class I histocompatibility antigen, A-108 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936476:25,957,980...25,961,418 JBrowse link
G LOC101965888 patr class I histocompatibility antigen, A-2 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936723:140,555...144,886 JBrowse link
G LOC101966190 class I histocompatibility antigen, Gogo-B*0101 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936723:301,834...305,761 JBrowse link
G LOC101966484 HLA class I histocompatibility antigen, B alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936723:501,297...505,374 JBrowse link
G LOC101966768 H-2 class I histocompatibility antigen, Q10 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936723:573,960...578,341 JBrowse link
G LOC101967338 class I histocompatibility antigen, Gogo-OKO alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936723:754,228...757,304 JBrowse link
G LOC101977967 saoe class I histocompatibility antigen, A alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936723:668,393...671,063 JBrowse link
G LOC120892327 vesicle-associated membrane protein 712-like located_in IEA UniProt GO_REF:0000044
G Mpeg1 macrophage expressed 1 located_in
is_active_in		 IEA
ISO		 (PMID:37347855) UniProt
UniProt		 PMID:37347855 GO_REF:0000044 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Ocrl OCRL inositol polyphosphate-5-phosphatase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936479:1,955,362...2,011,608
Ensembl chrNW_004936479:1,953,488...2,012,018 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936950:242,071...323,204
Ensembl chrNW_004936950:242,522...320,078 		JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in IEA TreeGrafter
UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936877:669,407...673,004
Ensembl chrNW_004936877:669,374...673,172 		JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in IEA TreeGrafter
Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936544:4,621,222...4,669,808
Ensembl chrNW_004936544:4,618,660...4,670,140 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936470:3,253,631...3,275,078
Ensembl chrNW_004936470:3,253,652...3,275,075 		JBrowse link
G Rab9b RAB9B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936499:10,501,837...10,506,793
Ensembl chrNW_004936499:10,437,611...10,504,320 		JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004936487:18,305,537...18,411,170
Ensembl chrNW_004936487:18,305,488...18,410,952 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:888,309...895,991
Ensembl chrNW_004936569:887,742...895,977 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,280,537...8,316,011
Ensembl chrNW_004936536:8,280,448...8,316,064 		JBrowse link
G Slc48a1 solute carrier family 48 member 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936512:5,672,952...5,680,502
Ensembl chrNW_004936512:5,672,952...5,684,113 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,843,798...5,384,305
Ensembl chrNW_004936540:4,845,212...5,384,170 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
G Tlr2 toll like receptor 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936958:345,055...393,384 JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,389,925...19,403,577
Ensembl chrNW_004936486:19,391,324...19,402,332 		JBrowse link
G Pla2g5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chrNW_004936474:6,131,915...6,150,810
Ensembl chrNW_004936474:6,131,884...6,150,819 		JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:377,359...389,121
Ensembl chrNW_004936472:378,173...389,381 		JBrowse link
G Mpeg1 macrophage expressed 1 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,428,515...3,436,877
Ensembl chrNW_004936581:3,421,256...3,431,706 		JBrowse link
G Slc48a1 solute carrier family 48 member 1 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,672,952...5,680,502
Ensembl chrNW_004936512:5,672,952...5,684,113 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18230
    cellular anatomical structure 18008
      cytoplasm 10327
        cytoplasmic vesicle 1822
          endocytic vesicle 210
            phagocytic vesicle 116
              clathrin-coated phagocytic vesicle + 0
              early phagosome + 15
              pexophagosome 0
              phagocytic vesicle lumen + 0
              phagocytic vesicle membrane + 37
              phagolysosome + 5
Path 2
Term Annotations click to browse term
  cellular_component 18230
    cellular anatomical structure 18008
      organelle 13375
        membrane-bounded organelle 12310
          vesicle 2000
            intracellular vesicle 1829
              cytoplasmic vesicle 1822
                endocytic vesicle 210
                  phagocytic vesicle 116
                    clathrin-coated phagocytic vesicle + 0
                    early phagosome + 15
                    pexophagosome 0
                    phagocytic vesicle lumen + 0
                    phagocytic vesicle membrane + 37
                    phagolysosome + 5
paths to the root