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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytic vesicle
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Accession:GO:0045335 term browser browse the term
Definition:A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: phagosome
 xref: Wikipedia:Phagosome
 never_in_taxon: NCBITaxon:4751 ! Fungi

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 located_in ISO (PMID:15469992) BHF-UCL PMID:15469992 NCBI chrNW_004624758:6,449,583...6,590,244
Ensembl chrNW_004624758:6,449,629...6,588,664 		JBrowse link
G Actg1 actin gamma 1 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004624767:1,967,002...2,160,102
Ensembl chrNW_004624767:1,966,898...2,160,465 		JBrowse link
G Anxa11 annexin A11 located_in ISO (PMID:9188810) UniProt PMID:9188810 NCBI chrNW_004624754:12,463,883...12,506,604
Ensembl chrNW_004624754:12,463,864...12,507,185 		JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Atg14 autophagy related 14 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004624884:165,443...220,525 JBrowse link
G Becn1 beclin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714 		JBrowse link
G Capg capping actin protein, gelsolin like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624749:17,706,582...17,764,087
Ensembl chrNW_004624749:17,723,715...17,746,346 		JBrowse link
G Cdc42 cell division cycle 42 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Cdc42ep2 CDC42 effector protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:21,057,316...21,066,220
Ensembl chrNW_004624767:21,059,993...21,066,829 		JBrowse link
G Cdc42ep4 CDC42 effector protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624801:3,372,778...3,394,855 JBrowse link
G Clcn3 chloride voltage-gated channel 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624769:1,156,522...1,246,531
Ensembl chrNW_004624769:1,156,460...1,232,612 		JBrowse link
G Coro1a coronin 1A located_in ISO (PMID:17442961) UniProt PMID:17442961 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357 		JBrowse link
G Ctss cathepsin S located_in ISO (PMID:30612035) UniProt PMID:30612035 NCBI chrNW_004624772:18,421,905...18,446,857
Ensembl chrNW_004624772:18,419,736...18,438,786 		JBrowse link
G Cybb cytochrome b-245 beta chain located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:17,759,625...17,793,434
Ensembl chrNW_004624762:17,757,404...17,793,467 		JBrowse link
G Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:7,265,899...7,306,848
Ensembl chrNW_004624738:7,265,907...7,306,822 		JBrowse link
G Evl Enah/Vasp-like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624734:3,926,939...4,023,841
Ensembl chrNW_004624734:3,927,004...4,071,621 		JBrowse link
G Flnb filamin B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624821:691,291...835,244
Ensembl chrNW_004624821:691,272...836,322 		JBrowse link
G Fmnl1 formin like 1 located_in ISO (PMID:21148482) UniProt PMID:21148482 NCBI chrNW_004624795:216,328...249,903
Ensembl chrNW_004624795:216,551...233,127 		JBrowse link
G Gsn gelsolin located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18414680 RGD:2316597 NCBI chrNW_004624733:32,284,793...32,310,980 JBrowse link
G Irgm immunity related GTPase M located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Kif16b kinesin family member 16B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624741:17,424,335...17,750,531 JBrowse link
G Kif5b kinesin family member 5B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624805:4,464,538...4,514,784
Ensembl chrNW_004624805:4,465,235...4,514,870 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 located_in ISO (PMID:22190682) AgBase PMID:22190682 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
G LOC101703392 twinfilin-2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G Mpeg1 macrophage expressed 1 located_in ISO (PMID:26402460) UniProt PMID:26402460 NCBI chrNW_004624864:1,470,862...1,474,957
Ensembl chrNW_004624864:1,470,887...1,473,046 		JBrowse link
G Mtor mechanistic target of rapamycin kinase located_in ISO (PMID:27623384) UniProt PMID:27623384 NCBI chrNW_004624818:1,570,155...1,698,264
Ensembl chrNW_004624818:1,570,276...1,698,259 		JBrowse link
G Myh9 myosin heavy chain 9 located_in ISO RGD PMID:19117932 RGD:6902913 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669 		JBrowse link
G Myo18a myosin XVIIIA located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:1,626,555...1,726,204
Ensembl chrNW_004624786:1,629,949...1,715,031 		JBrowse link
G Myo1c myosin IC located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:4,188,143...4,211,712
Ensembl chrNW_004624786:4,188,143...4,211,732 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 located_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 located_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004624779:16,307,875...16,435,567
Ensembl chrNW_004624779:16,307,800...16,434,169 		JBrowse link
G Pld4 phospholipase D family member 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:432,069...439,078
Ensembl chrNW_004624734:431,956...438,170 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624781:6,699,926...6,718,020
Ensembl chrNW_004624781:6,699,926...6,718,545 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624828:1,165,877...1,174,306
Ensembl chrNW_004624828:1,165,327...1,174,417 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:524,065...561,558 JBrowse link
G Rab12 RAB12, member RAS oncogene family located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624770:17,636,031...17,654,863
Ensembl chrNW_004624770:17,635,901...17,653,919 		JBrowse link
G Rab14 RAB14, member RAS oncogene family located_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000044 NCBI chrNW_004624760:14,069,403...14,096,684
Ensembl chrNW_004624760:14,069,387...14,096,684 		JBrowse link
G Rab20 RAB20, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624793:2,180,803...2,199,420
Ensembl chrNW_004624793:2,180,419...2,198,962 		JBrowse link
G Rab22a RAB22A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624741:24,637,061...24,696,305
Ensembl chrNW_004624741:24,636,248...24,690,753 		JBrowse link
G Rab23 RAB23, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624753:18,988,842...19,014,799 JBrowse link
G Rab29 RAB29, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:5,478,570...5,483,473
Ensembl chrNW_004624807:5,478,707...5,483,475 		JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624770:18,285,140...18,372,389
Ensembl chrNW_004624770:18,285,132...18,372,650 		JBrowse link
G Rab32 RAB32, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:7,900,027...7,917,944
Ensembl chrNW_004624753:7,900,267...7,917,854 		JBrowse link
G Rab34 RAB34, member RAS oncogene family located_in ISO (PMID:23197834)
(PMID:21255211)		 ParkinsonsUK-UCL
UniProt		 PMID:21255211 PMID:23197834 NCBI chrNW_004624786:1,286,886...1,291,582
Ensembl chrNW_004624786:1,286,887...1,291,419 		JBrowse link
G Rab38 RAB38, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624845:1,908,410...1,983,897
Ensembl chrNW_004624845:1,906,671...1,984,029 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:2,679,281...2,709,514
Ensembl chrNW_004624784:2,679,225...2,710,545 		JBrowse link
G Rab43 RAB43, member RAS oncogene family located_in ISO (PMID:21255211)
(PMID:19144319)		 UniProt
MGI		 PMID:19144319 PMID:21255211 NCBI chrNW_004624943:991,802...1,024,434
Ensembl chrNW_004624943:991,682...1,024,434 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in ISO (PMID:22493499), (PMID:25568335) MGI PMID:22493499 PMID:25568335 NCBI chrNW_004624821:5,271,246...5,311,469 JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004625042:56,509...112,519
Ensembl chrNW_004625042:56,517...112,612 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111 		JBrowse link
G Rab8b RAB8B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004624781:9,253,039...9,324,873
Ensembl chrNW_004624781:9,251,212...9,325,642 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:435,877...489,691
Ensembl chrNW_004624882:435,879...463,069 		JBrowse link
G Rab9b RAB9B, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624954:88,909...102,637
Ensembl chrNW_004624954:97,988...102,617 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004624772:7,340,152...7,425,218
Ensembl chrNW_004624772:7,368,653...7,424,938 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004624794:627,906...661,257 JBrowse link
G Snx3 sorting nexin 3 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624780:14,043,002...14,080,380
Ensembl chrNW_004624780:14,043,003...14,080,380 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 located_in ISO (PMID:21148482) UniProt PMID:21148482 NCBI chrNW_004624807:4,937,573...5,169,104
Ensembl chrNW_004624807:4,935,472...5,169,050 		JBrowse link
G Stx11 syntaxin 11 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153 		JBrowse link
G Stx12 syntaxin 12 located_in ISO (PMID:15469992) BHF-UCL PMID:15469992 NCBI chrNW_004624764:11,620,527...11,665,829
Ensembl chrNW_004624764:11,620,439...11,664,410 		JBrowse link
G Stx4 syntaxin 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058 		JBrowse link
G Stx6 syntaxin 6 located_in ISO (PMID:22190682) AgBase PMID:22190682 NCBI chrNW_004624771:1,222,809...1,264,662
Ensembl chrNW_004624771:1,227,052...1,265,158 		JBrowse link
G Stx8 syntaxin 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:11,712,667...11,992,201 JBrowse link
G Stxbp1 syntaxin binding protein 1 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Stxbp2 syntaxin binding protein 2 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624828:718,728...725,063
Ensembl chrNW_004624828:718,485...725,483 		JBrowse link
G Stxbp3 syntaxin binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:4,540,518...4,589,562
Ensembl chrNW_004624772:4,540,450...4,589,896 		JBrowse link
G Stxbp4 syntaxin binding protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624795:10,255,874...10,497,486
Ensembl chrNW_004624795:10,271,351...10,420,153 		JBrowse link
G Syt11 synaptotagmin 11 located_in ISO (PMID:25063865) ParkinsonsUK-UCL PMID:25063865 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in ISO (PMID:19549681) MGI PMID:19549681 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
G Tlr7 toll like receptor 7 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Uvrag UV radiation resistance associated located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004624817:989,362...1,371,096 JBrowse link
G Vamp3 vesicle associated membrane protein 3 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624818:4,010,130...4,019,695
Ensembl chrNW_004624818:4,009,991...4,019,728 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624771:9,986,835...10,034,112 JBrowse link
G Vamp7 vesicle associated membrane protein 7 located_in ISO (PMID:15470500) UniProt PMID:15470500 NCBI chrNW_004624980:40,937...94,547
Ensembl chrNW_004624980:40,843...94,528 		JBrowse link
G Vamp8 vesicle associated membrane protein 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624749:17,558,429...17,562,765
Ensembl chrNW_004624749:17,558,429...17,562,723 		JBrowse link
G Vim vimentin located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600 		JBrowse link
G Vps26b VPS26, retromer complex component B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624812:8,783,350...8,804,755
Ensembl chrNW_004624812:8,783,378...8,804,753 		JBrowse link
G Was WASP actin nucleation promoting factor located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482 		JBrowse link
G Zdhhc5 zDHHC palmitoyltransferase 5 located_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624864:3,027,537...3,049,567
Ensembl chrNW_004624864:3,028,170...3,048,945 		JBrowse link
G Zyx zyxin located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624800:11,380,787...11,389,418
Ensembl chrNW_004624800:11,381,178...11,389,271 		JBrowse link
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Pla2g5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004624821:5,271,246...5,311,469 JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in ISO (PMID:35716776) UniProt PMID:35716776 NCBI chrNW_004624730:19,902,504...20,514,138
Ensembl chrNW_004624730:19,902,620...20,514,160 		JBrowse link
G Snx3 sorting nexin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:14,043,002...14,080,380
Ensembl chrNW_004624780:14,043,003...14,080,380 		JBrowse link
G Syk spleen associated tyrosine kinase located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
G Syt11 synaptotagmin 11 located_in ISO (PMID:23303671), (PMID:28686317) UniProt PMID:23303671 PMID:28686317 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
G Syt7 synaptotagmin 7 located_in ISO (PMID:16982801) UniProt PMID:16982801 NCBI chrNW_004624926:722,201...765,834
Ensembl chrNW_004624926:722,224...765,033 		JBrowse link
G Tlr7 toll like receptor 7 located_in ISO (PMID:18305481) UniProt PMID:18305481 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Unc13b unc-13 homolog B located_in ISO (PMID:23197834) ParkinsonsUK-UCL PMID:23197834 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator located_in ISO (PMID:18305481) UniProt PMID:18305481 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:27219021) UniProt PMID:27219021 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Mtmr4 myotubularin related protein 4 is_active_in ISO (PMID:31543504) UniProt PMID:31543504 NCBI chrNW_004624871:302,589...328,773
Ensembl chrNW_004624871:302,588...328,623 		JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004624770:18,285,140...18,372,389
Ensembl chrNW_004624770:18,285,132...18,372,650 		JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa3 annexin A3 located_in ISO (PMID:7526843) UniProt PMID:7526843 NCBI chrNW_004624757:12,442,577...12,505,367
Ensembl chrNW_004624757:12,442,577...12,502,903 		JBrowse link
G Clec4e C-type lectin domain family 4 member E is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Coro1a coronin 1A located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 located_in ISO (PMID:10485905) UniProt PMID:10485905 NCBI chrNW_004624737:24,135,083...24,164,935 JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 located_in ISO (PMID:24415791) UniProt PMID:24415791 NCBI chrNW_004624747:21,237,736...21,266,531
Ensembl chrNW_004624747:21,256,918...21,264,984 		JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624764:20,558,145...20,610,126
Ensembl chrNW_004624764:20,559,009...20,609,341 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 located_in ISO (PMID:9670047) MGI PMID:9670047 NCBI chrNW_004624931:297,864...343,314
Ensembl chrNW_004624931:298,328...343,915 		JBrowse link
G LOC101721592 class I histocompatibility antigen, Gogo-B*0102 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624754:24,680,008...24,683,547
Ensembl chrNW_004624754:24,680,085...24,683,925 		JBrowse link
G Mpeg1 macrophage expressed 1 located_in
is_active_in		 IEA
ISO		 (PMID:37347855) UniProt
UniProt		 PMID:37347855 GO_REF:0000044 NCBI chrNW_004624864:1,470,862...1,474,957
Ensembl chrNW_004624864:1,470,887...1,473,046 		JBrowse link
G Ocrl OCRL inositol polyphosphate-5-phosphatase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624797:8,731,130...8,792,300
Ensembl chrNW_004624797:8,730,713...8,792,727 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing located_in ISO (PMID:30612035) UniProt PMID:30612035 NCBI chrNW_004624765:7,684,770...7,806,381
Ensembl chrNW_004624765:7,681,875...7,790,704 		JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624825:4,708,378...4,711,846
Ensembl chrNW_004624825:4,708,093...4,711,845 		JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:924,211...978,625 JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004625042:56,509...112,519
Ensembl chrNW_004625042:56,517...112,612 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624882:435,877...489,691
Ensembl chrNW_004624882:435,879...463,069 		JBrowse link
G Rab9b RAB9B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624954:88,909...102,637
Ensembl chrNW_004624954:97,988...102,617 		JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004624760:4,376,733...4,474,834
Ensembl chrNW_004624760:4,376,713...4,474,837 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624823:6,612,452...6,625,047
Ensembl chrNW_004624823:6,612,452...6,625,300 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624912:180,048...222,909
Ensembl chrNW_004624912:179,969...222,909 		JBrowse link
G Slc48a1 solute carrier family 48 member 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624816:4,476,502...4,496,641
Ensembl chrNW_004624816:4,476,491...4,485,030 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in ISO (PMID:35716776) UniProt PMID:35716776 NCBI chrNW_004624730:19,902,504...20,514,138
Ensembl chrNW_004624730:19,902,620...20,514,160 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in ISO (PMID:19549681) MGI PMID:19549681 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
G Tlr2 toll like receptor 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624980:40,937...94,547
Ensembl chrNW_004624980:40,843...94,528 		JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 located_in ISO (PMID:17548643) BHF-UCL PMID:17548643 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Pla2g5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232 		JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp1 lysosomal associated membrane protein 1 located_in ISO (PMID:23395172) MGI PMID:23395172 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
G Mpeg1 macrophage expressed 1 is_active_in ISO (PMID:31537793) UniProt PMID:31537793 NCBI chrNW_004624864:1,470,862...1,474,957
Ensembl chrNW_004624864:1,470,887...1,473,046 		JBrowse link
G Slc48a1 solute carrier family 48 member 1 is_active_in ISO (PMID:23395172) MGI PMID:23395172 NCBI chrNW_004624816:4,476,502...4,496,641
Ensembl chrNW_004624816:4,476,491...4,485,030 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18615
    cellular anatomical structure 18480
      cytoplasm 10524
        cytoplasmic vesicle 1790
          endocytic vesicle 198
            phagocytic vesicle 109
              clathrin-coated phagocytic vesicle + 0
              early phagosome + 14
              pexophagosome 0
              phagocytic vesicle lumen + 0
              phagocytic vesicle membrane + 28
              phagolysosome + 5
Path 2
Term Annotations click to browse term
  cellular_component 18615
    cellular anatomical structure 18480
      organelle 13123
        membrane-bounded organelle 12024
          vesicle 1967
            intracellular vesicle 1798
              cytoplasmic vesicle 1790
                endocytic vesicle 198
                  phagocytic vesicle 109
                    clathrin-coated phagocytic vesicle + 0
                    early phagosome + 14
                    pexophagosome 0
                    phagocytic vesicle lumen + 0
                    phagocytic vesicle membrane + 28
                    phagolysosome + 5
paths to the root