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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytic vesicle
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Accession:GO:0045335 term browser browse the term
Definition:A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: phagosome
 xref: Wikipedia:Phagosome
 never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 located_in IDA (PMID:15469992) BHF-UCL PMID:15469992 NCBI chr 9:104,781,006...104,928,155
Ensembl chr 9:104,781,006...104,928,155 		JBrowse link
G AC097637.1 novel twinfilin, actin-binding protein, homolog 2 (Drosophila) (TWF2) and toll-like receptor 9 (TLR9) protein located_in IEA UniProt GO_REF:0000044 Ensembl chr 3:52,221,081...52,231,190 JBrowse link
G ACTG1 actin gamma 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:81,509,971...81,512,799
Ensembl chr17:81,509,413...81,523,847 		JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,396,412...46,594,023
Ensembl chr11:46,396,414...46,594,125 		JBrowse link
G ANXA11 annexin A11 located_in IDA (PMID:9188810) UniProt PMID:9188810 NCBI chr10:80,150,889...80,205,808
Ensembl chr10:80,150,889...80,205,572 		JBrowse link
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 3:57,227,729...57,273,471
Ensembl chr 3:57,227,726...57,278,105 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA UniProt GO_REF:0000044 NCBI chr12:105,173,300...105,236,174
Ensembl chr12:105,173,297...105,236,203 		JBrowse link
G ATG14 autophagy related 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,366,391...55,411,830
Ensembl chr14:55,366,391...55,411,830 		JBrowse link
G BECN1 beclin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350 		JBrowse link
G CAPG capping actin protein, gelsolin like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 2:85,391,602...85,419,540
Ensembl chr 2:85,394,753...85,418,432 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) located_in TAS Reactome Reactome:R-HSA-1236956 NCBI chr 7:80,602,207...80,679,274
Ensembl chr 7:80,369,575...80,679,277 		JBrowse link
G CD82 CD82 molecule located_in IEA UniProt GO_REF:0000044 NCBI chr11:44,564,409...44,620,358
Ensembl chr11:44,564,427...44,620,363 		JBrowse link
G CDC42 cell division cycle 42 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360 		JBrowse link
G CDC42EP2 CDC42 effector protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:65,314,866...65,322,417
Ensembl chr11:65,314,866...65,322,417 		JBrowse link
G CDC42EP4 CDC42 effector protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:73,283,624...73,312,001
Ensembl chr17:73,283,624...73,312,005 		JBrowse link
G CLCN3 chloride voltage-gated channel 3 located_in IDA (PMID:16522634) GO_Central PMID:16522634 NCBI chr 4:169,620,578...169,723,673
Ensembl chr 4:169,612,633...169,723,673 		JBrowse link
G CORO1A coronin 1A located_in IDA (PMID:17442961) UniProt PMID:17442961 NCBI chr16:30,183,602...30,189,076
Ensembl chr16:30,182,827...30,189,076 		JBrowse link
G CTSS cathepsin S located_in IDA
IEA		 (PMID:30612035) UniProt PMID:30612035 GO_REF:0000044 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957 		JBrowse link
G CYBB cytochrome b-245 beta chain located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:37,780,059...37,813,461
Ensembl chr  X:37,780,018...37,813,461 		JBrowse link
G ELANE elastase, neutrophil expressed located_in IEA UniProt GO_REF:0000044 NCBI chr19:852,303...856,243
Ensembl chr19:851,014...856,247 		JBrowse link
G EVL Enah/Vasp-like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr14:99,971,422...100,144,236
Ensembl chr14:99,971,449...100,144,236 		JBrowse link
G FLNB filamin B located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,008,422...58,172,251
Ensembl chr 3:58,008,398...58,172,251 		JBrowse link
G FMNL1 formin like 1 located_in ISS
IEA		 UniProt GO_REF:0000024 GO_REF:0000044 NCBI chr17:45,221,885...45,247,318
Ensembl chr17:45,221,444...45,247,319 		JBrowse link
G GSN gelsolin located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:121,201,483...121,332,842
Ensembl chr 9:121,207,794...121,332,843 		JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18414680 RGD:2316597 NCBI chr 5:157,029,413...157,069,407
Ensembl chr 5:157,026,742...157,069,396 		JBrowse link
G IRGM immunity related GTPase M located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 5:150,846,521...150,902,402
Ensembl chr 5:150,846,521...150,900,736 		JBrowse link
G ITGAV integrin subunit alpha V located_in TAS Reactome Reactome:R-HSA-1236956 NCBI chr 2:186,590,056...186,680,901
Ensembl chr 2:186,590,010...186,680,901 		JBrowse link
G ITGB5 integrin subunit beta 5 located_in TAS Reactome Reactome:R-HSA-1236956 NCBI chr 3:124,761,948...124,901,418
Ensembl chr 3:124,761,948...124,901,418 		JBrowse link
G KIF16B kinesin family member 16B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr20:16,272,104...16,573,448
Ensembl chr20:16,272,104...16,573,448 		JBrowse link
G KIF5B kinesin family member 5B located_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425 		JBrowse link
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:113,297,239...113,323,672
Ensembl chr13:113,297,239...113,323,672 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 located_in IEA UniProt GO_REF:0000044 NCBI chr12:40,224,997...40,369,285
Ensembl chr12:40,196,744...40,369,285 		JBrowse link
G MPEG1 macrophage expressed 1 located_in ISS UniProt GO_REF:0000024 NCBI chr11:59,208,510...59,212,927
Ensembl chr11:59,208,510...59,212,927 		JBrowse link
G MTOR mechanistic target of rapamycin kinase located_in IDA
IEA		 (PMID:27623384) UniProt PMID:27623384 GO_REF:0000044 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556 		JBrowse link
G MYH9 myosin heavy chain 9 located_in ISO RGD PMID:19117932 RGD:6902913 NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,280...36,388,010 		JBrowse link
G MYO18A myosin XVIIIA located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:29,071,122...29,180,398
Ensembl chr17:29,071,122...29,180,398 		JBrowse link
G MYO1C myosin IC located_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,464,186...1,492,686
Ensembl chr17:1,464,186...1,492,686 		JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:30,424,527...30,478,784
Ensembl chr 7:30,424,527...30,478,784 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 located_in IDA (PMID:31649195) UniProt PMID:31649195 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 located_in TAS Reactome Reactome:R-HSA-8863973 NCBI chr15:43,746,438...43,773,278
Ensembl chr15:43,746,394...43,773,279 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:41,955,234...42,087,830
Ensembl chr18:41,955,234...42,087,830 		JBrowse link
G PLA2G5 phospholipase A2 group V located_in IEA UniProt GO_REF:0000044 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911 		JBrowse link
G PLD4 phospholipase D family member 4 part_of
is_active_in
located_in		 ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr14:104,924,879...104,937,785
Ensembl chr14:104,924,713...104,937,761 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family located_in IDA
IEA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr15:65,869,491...65,891,989
Ensembl chr15:65,726,054...65,891,989 		JBrowse link
G RAB11B RAB11B, member RAS oncogene family located_in IDA (PMID:21255211) UniProt PMID:21255211 NCBI chr19:8,390,360...8,404,434
Ensembl chr19:8,389,981...8,404,434 		JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 is_active_in
located_in		 IBA
ISO		 (PMID:19144319) GO_Central
MGI		 PMID:19144319 GO_REF:0000033 NCBI chr 2:73,073,382...73,112,948
Ensembl chr 2:73,073,382...73,156,721 		JBrowse link
G RAB12 RAB12, member RAS oncogene family located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr18:8,609,437...8,639,383
Ensembl chr18:8,609,437...8,639,383 		JBrowse link
G RAB14 RAB14, member RAS oncogene family located_in
is_active_in		 IDA
IBA
IEA		 (PMID:21255211) UniProt
GO_Central
InterPro		 PMID:21255211 GO_REF:0000002 GO_REF:0000033 GO_REF:0000044 NCBI chr 9:121,178,133...121,201,869
Ensembl chr 9:121,178,133...121,223,014 		JBrowse link
G RAB20 RAB20, member RAS oncogene family located_in IEA
IDA		 (PMID:21255211) Ensembl
UniProt		 PMID:21255211 GO_REF:0000044 GO_REF:0000107 NCBI chr13:110,523,066...110,561,722
Ensembl chr13:110,523,066...110,561,722 		JBrowse link
G RAB22A RAB22A, member RAS oncogene family located_in IEA
IDA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr20:58,309,715...58,367,507
Ensembl chr20:58,309,715...58,367,507 		JBrowse link
G RAB23 RAB23, member RAS oncogene family located_in IEA
IDA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr 6:57,186,992...57,222,307
Ensembl chr 6:57,186,992...57,222,307 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in IEA
IDA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr18:9,708,301...9,862,551
Ensembl chr18:9,708,275...9,862,551 		JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in IEA
IDA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr 6:146,543,833...146,554,953
Ensembl chr 6:146,543,833...146,554,953 		JBrowse link
G RAB34 RAB34, member RAS oncogene family located_in
is_active_in		 IEA
IBA
IDA		 (PMID:21255211) UniProt
GO_Central		 PMID:21255211 GO_REF:0000033 GO_REF:0000044 NCBI chr17:28,714,281...28,718,428
Ensembl chr17:28,714,281...28,718,429 		JBrowse link
G RAB38 RAB38, member RAS oncogene family located_in IDA
IEA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr11:87,803,715...88,175,443
Ensembl chr11:88,113,251...88,175,443 		JBrowse link
G RAB39A RAB39A, member RAS oncogene family located_in IDA
IEA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr11:107,928,448...107,963,482
Ensembl chr11:107,928,448...107,963,482 		JBrowse link
G RAB43 RAB43, member RAS oncogene family located_in IEA
IDA		 (PMID:21255211) Ensembl
UniProt		 PMID:21255211 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:129,087,569...129,122,150
Ensembl chr 3:129,087,569...129,122,801 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:19,947,097...19,985,175
Ensembl chr 3:19,947,097...19,985,175 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in
is_active_in		 IDA
IBA		 (PMID:21255211) UniProt
GO_Central		 PMID:21255211 GO_REF:0000033 NCBI chr 3:128,726,183...128,814,798
Ensembl chr 3:128,693,669...128,825,942 		JBrowse link
G RAB7B RAB7B, member RAS oncogene family located_in
is_active_in		 IEA
IBA
IDA		 (PMID:21255211) Ensembl
GO_Central
UniProt		 PMID:21255211 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:205,976,740...206,003,395
Ensembl chr 1:205,976,740...206,003,461 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family located_in IDA
IEA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr19:16,111,889...16,134,234
Ensembl chr19:16,111,889...16,134,234 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family located_in IDA
IEA		 (PMID:21255211) UniProt PMID:21255211 GO_REF:0000044 NCBI chr15:63,189,606...63,267,776
Ensembl chr15:63,189,560...63,267,776 		JBrowse link
G RAB9A RAB9A, member RAS oncogene family located_in
is_active_in		 IEA
IBA
IDA		 (PMID:21255211) UniProt
GO_Central		 PMID:21255211 GO_REF:0000033 GO_REF:0000044 NCBI chr  X:13,689,128...13,710,504
Ensembl chr  X:13,689,128...13,710,504 		JBrowse link
G RAB9B RAB9B, member RAS oncogene family located_in
is_active_in		 IDA
IBA
IEA		 (PMID:21255211) UniProt
GO_Central		 PMID:21255211 GO_REF:0000033 GO_REF:0000044 NCBI chr  X:103,776,324...103,832,257
Ensembl chr  X:103,822,327...103,832,257 		JBrowse link
G RAP1A RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chr 1:111,542,009...111,716,691
Ensembl chr 1:111,542,218...111,716,691 		JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr17:5,208,920...5,234,860
Ensembl chr17:5,208,920...5,234,860 		JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:160,608,106...160,647,044
Ensembl chr 1:160,608,106...160,647,044 		JBrowse link
G SNX3 sorting nexin 3 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:108,211,222...108,261,040
Ensembl chr 6:108,211,222...108,261,246 		JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 located_in IEA
ISS		 UniProt GO_REF:0000024 GO_REF:0000044 NCBI chr 1:206,203,541...206,464,436
Ensembl chr 1:206,203,346...206,464,436 		JBrowse link
G STX11 syntaxin 11 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 6:144,139,963...144,191,939
Ensembl chr 6:144,150,487...144,191,939 		JBrowse link
G STX12 syntaxin 12 located_in IDA (PMID:15469992) BHF-UCL PMID:15469992 NCBI chr 1:27,773,219...27,824,443
Ensembl chr 1:27,773,219...27,824,443 		JBrowse link
G STX4 syntaxin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:31,033,095...31,040,168
Ensembl chr16:31,032,889...31,042,975 		JBrowse link
G STX6 syntaxin 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:180,972,725...181,022,870
Ensembl chr 1:180,972,712...181,023,121 		JBrowse link
G STX8 syntaxin 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:9,250,471...9,575,820
Ensembl chr17:9,250,471...9,576,591 		JBrowse link
G STXBP1 syntaxin binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:127,611,912...127,696,029
Ensembl chr 9:127,579,370...127,696,027 		JBrowse link
G STXBP2 syntaxin binding protein 2 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr19:7,629,793...7,647,873
Ensembl chr19:7,636,772...7,647,873 		JBrowse link
G STXBP3 syntaxin binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,746,674...108,809,523
Ensembl chr 1:108,746,674...108,809,523 		JBrowse link
G STXBP4 syntaxin binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:54,968,765...55,213,273
Ensembl chr17:54,968,727...55,173,632 		JBrowse link
G SYT11 synaptotagmin 11 located_in IEA
ISS		 Ensembl
ParkinsonsUK-UCL
UniProt		 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:155,859,567...155,885,199
Ensembl chr 1:155,859,567...155,885,199 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,039,025...68,053,762
Ensembl chr11:68,039,025...68,050,895 		JBrowse link
G TLR7 toll like receptor 7 located_in IEA UniProt GO_REF:0000044 NCBI chr  X:12,867,072...12,890,361
Ensembl chr  X:12,867,072...12,890,361 		JBrowse link
G TLR9 toll like receptor 9 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645 		JBrowse link
G TRIM14 tripartite motif containing 14 located_in IEA UniProt GO_REF:0000044 NCBI chr 9:98,035,797...98,119,222
Ensembl chr 9:98,069,275...98,119,222 		JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator located_in IEA UniProt GO_REF:0000044 NCBI chr11:67,991,100...68,004,097
Ensembl chr11:67,991,100...68,004,982 		JBrowse link
G UVRAG UV radiation resistance associated located_in IEA Ensembl GO_REF:0000107 NCBI chr11:75,815,210...76,144,232
Ensembl chr11:75,815,210...76,144,232 		JBrowse link
G VAMP3 vesicle associated membrane protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,771,296...7,781,432
Ensembl chr 1:7,771,296...7,781,432 		JBrowse link
G VAMP4 vesicle associated membrane protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 1:171,700,160...171,742,065
Ensembl chr 1:171,700,160...171,742,074 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 located_in ISS (PMID:15470500) UniProt PMID:15470500 NCBI chr  X:155,881,345...155,943,769
NCBI chr  Y:57,067,865...57,130,289
Ensembl chr  Y:57,067,865...57,130,289
Ensembl chr  X:57,067,865...57,130,289 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 2:85,577,586...85,582,031
Ensembl chr 2:85,561,562...85,582,031 		JBrowse link
G VIM vimentin located_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593 		JBrowse link
G VPS26B VPS26 retromer complex component B located_in IEA Ensembl GO_REF:0000107 NCBI chr11:134,224,671...134,247,788
Ensembl chr11:134,224,671...134,247,788 		JBrowse link
G WAS WASP actin nucleation promoting factor located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431 		JBrowse link
G ZDHHC5 zinc finger DHHC-type palmitoyltransferase 5 located_in IEA
IDA		 (PMID:31649195) Ensembl
UniProt		 PMID:31649195 GO_REF:0000107 NCBI chr11:57,668,114...57,701,182
Ensembl chr11:57,667,747...57,701,182 		JBrowse link
G ZYX zyxin located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:143,381,345...143,391,111
Ensembl chr 7:143,381,295...143,391,111 		JBrowse link
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:57,227,729...57,273,471
Ensembl chr 3:57,227,726...57,278,105 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:105,173,300...105,236,174
Ensembl chr12:105,173,297...105,236,203 		JBrowse link
G PLA2G5 phospholipase A2 group V located_in ISS UniProt GO_REF:0000024 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:19,947,097...19,985,175
Ensembl chr 3:19,947,097...19,985,175 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:143,265,222...143,848,468
Ensembl chr 3:143,265,222...143,848,485 		JBrowse link
G SNX3 sorting nexin 3 located_in IDA (PMID:23237080) UniProt PMID:23237080 NCBI chr 6:108,211,222...108,261,040
Ensembl chr 6:108,211,222...108,261,246 		JBrowse link
G SYK spleen associated tyrosine kinase located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:90,801,600...90,898,549
Ensembl chr 9:90,801,787...90,898,549 		JBrowse link
G SYT11 synaptotagmin 11 located_in IEA
ISS		 Ensembl
ParkinsonsUK-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:155,859,567...155,885,199
Ensembl chr 1:155,859,567...155,885,199 		JBrowse link
G SYT7 synaptotagmin 7 located_in ISS UniProt GO_REF:0000024 NCBI chr11:61,513,714...61,588,387
Ensembl chr11:61,513,714...61,581,148 		JBrowse link
G TLR7 toll like receptor 7 located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:12,867,072...12,890,361
Ensembl chr  X:12,867,072...12,890,361 		JBrowse link
G TLR9 toll like receptor 9 located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:52,221,080...52,225,645
Ensembl chr 3:52,221,080...52,225,645 		JBrowse link
G UNC13B unc-13 homolog B located_in ISO (PMID:23197834) ParkinsonsUK-UCL PMID:23197834 NCBI chr 9:35,162,009...35,405,335
Ensembl chr 9:35,161,992...35,405,338 		JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:67,991,100...68,004,097
Ensembl chr11:67,991,100...68,004,982 		JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:105,173,300...105,236,174
Ensembl chr12:105,173,297...105,236,203 		JBrowse link
G MTMR4 myotubularin related protein 4 is_active_in IDA (PMID:31543504) UniProt PMID:31543504 NCBI chr17:58,489,537...58,519,047
Ensembl chr17:58,489,529...58,517,905 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr18:9,708,301...9,862,551
Ensembl chr18:9,708,275...9,862,551 		JBrowse link
phagocytic vesicle lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNLY granulysin located_in TAS Reactome Reactome:R-HSA-6807565 Reactome:R-HSA-6807578 NCBI chr 2:85,694,358...85,698,852
Ensembl chr 2:85,685,175...85,698,852 		JBrowse link
G HGS hepatocyte growth factor-regulated tyrosine kinase substrate located_in TAS Reactome Reactome:R-HSA-9635667 NCBI chr17:81,684,011...81,702,121
Ensembl chr17:81,683,326...81,703,138 		JBrowse link
G LTF lactotransferrin located_in TAS Reactome Reactome:R-HSA-1222491 Reactome:R-HSA-1222641 Reactome:R-HSA-8951549 Reactome:R-HSA-8951552 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234 		JBrowse link
G MPO myeloperoxidase located_in TAS Reactome Reactome:R-HSA-6789031 Reactome:R-HSA-6789126 Reactome:R-HSA-6789136 Reactome:R-HSA-8933635 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935 		JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 located_in TAS Reactome Reactome:R-HSA-6789072 NCBI chr19:46,019,153...46,023,053
Ensembl chr19:46,019,153...46,023,053 		JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA3 annexin A3 located_in IDA (PMID:7526843) UniProt PMID:7526843 NCBI chr 4:78,551,770...78,610,447
Ensembl chr 4:78,551,747...78,610,451 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA UniProt GO_REF:0000044 NCBI chr12:105,173,300...105,236,174
Ensembl chr12:105,173,297...105,236,203 		JBrowse link
G ATG12 autophagy related 12 located_in TAS Reactome Reactome:R-HSA-5205663 Reactome:R-HSA-8959571 NCBI chr 5:115,828,200...115,841,565
Ensembl chr 5:115,828,200...115,841,837 		JBrowse link
G ATG5 autophagy related 5 located_in TAS Reactome Reactome:R-HSA-5205663 Reactome:R-HSA-8959571 NCBI chr 6:106,184,476...106,325,760
Ensembl chr 6:106,045,423...106,325,791 		JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr17:42,458,878...42,522,579
Ensembl chr17:42,458,844...42,522,582 		JBrowse link
G ATP6V0A2 ATPase H+ transporting V0 subunit a2 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr12:123,712,353...123,761,755
Ensembl chr12:123,712,353...123,761,755 		JBrowse link
G ATP6V0A4 ATPase H+ transporting V0 subunit a4 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr 7:138,706,294...138,798,196
Ensembl chr 7:138,706,294...138,799,560 		JBrowse link
G ATP6V0B ATPase H+ transporting V0 subunit b located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr 1:43,974,960...43,978,295
Ensembl chr 1:43,974,487...43,978,295 		JBrowse link
G ATP6V0C ATPase H+ transporting V0 subunit c located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr16:2,513,726...2,520,218
Ensembl chr16:2,513,952...2,520,218 		JBrowse link
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr16:67,438,019...67,481,157
Ensembl chr16:67,438,014...67,481,181 		JBrowse link
G ATP6V0D2 ATPase H+ transporting V0 subunit d2 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr 8:86,098,910...86,154,225
Ensembl chr 8:85,987,323...86,154,225 		JBrowse link
G ATP6V0E1 ATPase H+ transporting V0 subunit e1 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr 5:172,983,771...173,035,445
Ensembl chr 5:172,983,771...173,035,445 		JBrowse link
G ATP6V0E2 ATPase H+ transporting V0 subunit e2 located_in TAS Reactome Reactome:R-HSA-1222516 NCBI chr 7:149,872,964...149,880,713
Ensembl chr 7:149,872,968...149,891,204 		JBrowse link
G ATP7A ATPase copper transporting alpha located_in TAS Reactome Reactome:R-HSA-6803545 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,690...78,050,395 		JBrowse link
G B2M beta-2-microglobulin located_in TAS Reactome Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr15:44,711,517...44,718,145
Ensembl chr15:44,711,358...44,718,851 		JBrowse link
G CALR calreticulin located_in TAS Reactome Reactome:R-HSA-8951595 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489 		JBrowse link
G CLEC4E C-type lectin domain family 4 member E located_in
is_active_in		 IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,533,275...8,540,905
Ensembl chr12:8,533,305...8,540,905 		JBrowse link
G CORO1A coronin 1A located_in IEA UniProt GO_REF:0000044 NCBI chr16:30,183,602...30,189,076
Ensembl chr16:30,182,827...30,189,076 		JBrowse link
G CYBA cytochrome b-245 alpha chain located_in TAS Reactome Reactome:R-HSA-1222376 Reactome:R-HSA-1236967 Reactome:R-HSA-5668605 Reactome:R-HSA-5668629 Reactome:R-HSA-6789092 Reactome:R-HSA-9014424 Reactome:R-HSA-9626848 NCBI chr16:88,643,289...88,651,053
Ensembl chr16:88,643,275...88,651,083 		JBrowse link
G CYBB cytochrome b-245 beta chain located_in TAS Reactome Reactome:R-HSA-1222376 Reactome:R-HSA-1236967 Reactome:R-HSA-5668605 Reactome:R-HSA-5668629 Reactome:R-HSA-6789092 Reactome:R-HSA-9014424 Reactome:R-HSA-9626848 NCBI chr  X:37,780,059...37,813,461
Ensembl chr  X:37,780,018...37,813,461 		JBrowse link
G DMBT1 deleted in malignant brain tumors 1 located_in IDA (PMID:10485905) UniProt PMID:10485905 NCBI chr10:122,560,754...122,643,736
Ensembl chr10:122,560,665...122,643,736 		JBrowse link
G DNM2 dynamin 2 located_in IEA UniProt GO_REF:0000044 NCBI chr19:10,718,079...10,831,903
Ensembl chr19:10,718,055...10,833,488 		JBrowse link
G HLA-A major histocompatibility complex, class I, A located_in TAS
IEA		 Reactome
UniProt		 GO_REF:0000117 Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:29,942,532...29,945,870
Ensembl chr 6:29,941,260...29,949,572 		JBrowse link
G HLA-B major histocompatibility complex, class I, B located_in TAS
IEA		 Reactome
UniProt		 GO_REF:0000117 Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:31,353,875...31,357,179
Ensembl chr 6:31,353,872...31,367,067 		JBrowse link
G HLA-C major histocompatibility complex, class I, C located_in TAS
IEA		 Reactome
UniProt		 GO_REF:0000117 Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:31,268,749...31,272,092
Ensembl chr 6:31,268,749...31,272,130 		JBrowse link
G HLA-DPB1 major histocompatibility complex, class II, DP beta 1 located_in IEA UniProt GO_REF:0000117 NCBI chr 6:33,075,990...33,089,696
Ensembl chr 6:33,075,936...33,089,696 		JBrowse link
G HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 located_in IEA UniProt GO_REF:0000117 NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383 		JBrowse link
G HLA-E major histocompatibility complex, class I, E located_in TAS
IEA		 Reactome
UniProt		 GO_REF:0000117 Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:30,489,509...30,494,194
Ensembl chr 6:30,489,509...30,494,194 		JBrowse link
G HLA-F major histocompatibility complex, class I, F located_in TAS
IEA		 Reactome
UniProt		 GO_REF:0000117 Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:29,723,434...29,738,532
Ensembl chr 6:29,722,775...29,738,528 		JBrowse link
G HLA-G major histocompatibility complex, class I, G located_in TAS Reactome Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:29,826,474...29,831,021
Ensembl chr 6:29,826,967...29,831,125 		JBrowse link
G HLA-H major histocompatibility complex, class I, H (pseudogene) located_in TAS
IEA		 Reactome
UniProt		 GO_REF:0000117 Reactome:R-HSA-1236965 Reactome:R-HSA-8863973 NCBI chr 6:29,887,573...29,891,079
Ensembl chr 6:29,887,752...29,890,482
Ensembl chr 6:29,887,752...29,890,482 		JBrowse link
G HVCN1 hydrogen voltage gated channel 1 located_in TAS
IEA
IDA		 (PMID:24415791) Reactome
UniProt
Ensembl		 PMID:24415791 GO_REF:0000044 GO_REF:0000107 Reactome:R-HSA-6788999 NCBI chr12:110,648,686...110,704,952
Ensembl chr12:110,627,841...110,704,950 		JBrowse link
G INPP5B inositol polyphosphate-5-phosphatase B located_in IEA UniProt GO_REF:0000044 NCBI chr 1:37,860,697...37,947,057
Ensembl chr 1:37,860,697...37,947,053 		JBrowse link
G IRGM immunity related GTPase M located_in IEA UniProt GO_REF:0000044 NCBI chr 5:150,846,521...150,902,402
Ensembl chr 5:150,846,521...150,900,736 		JBrowse link
G LAMP2 lysosomal associated membrane protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:120,426,148...120,469,349
Ensembl chr  X:120,426,148...120,469,365 		JBrowse link
G MCOLN1 mucolipin TRP cation channel 1 located_in IEA UniProt GO_REF:0000044 NCBI chr19:7,522,624...7,534,009
Ensembl chr19:7,522,624...7,534,009 		JBrowse link
G MPEG1 macrophage expressed 1 is_active_in
located_in		 ISS
IEA		 (PMID:37347855) UniProt PMID:37347855 GO_REF:0000024 GO_REF:0000044 NCBI chr11:59,208,510...59,212,927
Ensembl chr11:59,208,510...59,212,927 		JBrowse link
G MTMR4 myotubularin related protein 4 located_in IEA UniProt GO_REF:0000044 NCBI chr17:58,489,537...58,519,047
Ensembl chr17:58,489,529...58,517,905 		JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase located_in IEA UniProt GO_REF:0000044 NCBI chr  X:129,540,259...129,592,556
Ensembl chr  X:129,539,849...129,592,561 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in TAS Reactome Reactome:R-HSA-6798174 NCBI chr18:41,955,234...42,087,830
Ensembl chr18:41,955,234...42,087,830 		JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 located_in TAS Reactome Reactome:R-HSA-6798174 NCBI chr 3:130,678,934...130,746,829
Ensembl chr 3:130,678,934...130,746,829 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing located_in IDA
IEA		 (PMID:30612035) UniProt PMID:30612035 GO_REF:0000044 NCBI chr 2:208,266,056...208,358,746
Ensembl chr 2:208,266,255...208,358,746 		JBrowse link
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in
is_active_in		 IEA
IBA
ISS		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr14:20,457,681...20,461,434
Ensembl chr14:20,457,681...20,461,465 		JBrowse link
G PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in
is_active_in		 IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 8:90,993,802...91,040,859
Ensembl chr 8:90,993,802...91,040,872 		JBrowse link
G RAB10 RAB10, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 2:26,033,285...26,137,454
Ensembl chr 2:26,034,084...26,137,454 		JBrowse link
G RAB11B RAB11B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr19:8,390,360...8,404,434
Ensembl chr19:8,389,981...8,404,434 		JBrowse link
G RAB11FIP1 RAB11 family interacting protein 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 8:37,858,618...37,899,497
Ensembl chr 8:37,858,618...37,899,497 		JBrowse link
G RAB20 RAB20, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr13:110,523,066...110,561,722
Ensembl chr13:110,523,066...110,561,722 		JBrowse link
G RAB22A RAB22A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr20:58,309,715...58,367,507
Ensembl chr20:58,309,715...58,367,507 		JBrowse link
G RAB23 RAB23, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 6:57,186,992...57,222,307
Ensembl chr 6:57,186,992...57,222,307 		JBrowse link
G RAB28 RAB28, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 4:13,367,724...13,484,340
Ensembl chr 4:13,361,354...13,484,365 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr18:9,708,301...9,862,551
Ensembl chr18:9,708,275...9,862,551 		JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 6:146,543,833...146,554,953
Ensembl chr 6:146,543,833...146,554,953 		JBrowse link
G RAB34 RAB34, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr17:28,714,281...28,718,428
Ensembl chr17:28,714,281...28,718,429 		JBrowse link
G RAB38 RAB38, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr11:87,803,715...88,175,443
Ensembl chr11:88,113,251...88,175,443 		JBrowse link
G RAB39A RAB39A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr11:107,928,448...107,963,482
Ensembl chr11:107,928,448...107,963,482 		JBrowse link
G RAB43 RAB43, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 3:129,087,569...129,122,150
Ensembl chr 3:129,087,569...129,122,801 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 3:19,947,097...19,985,175
Ensembl chr 3:19,947,097...19,985,175 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in IEA
TAS		 UniProt
Reactome		 GO_REF:0000044 Reactome:R-HSA-9636564 NCBI chr 3:128,726,183...128,814,798
Ensembl chr 3:128,693,669...128,825,942 		JBrowse link
G RAB7B RAB7B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 1:205,976,740...206,003,395
Ensembl chr 1:205,976,740...206,003,461 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr19:16,111,889...16,134,234
Ensembl chr19:16,111,889...16,134,234 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr15:63,189,606...63,267,776
Ensembl chr15:63,189,560...63,267,776 		JBrowse link
G RAB9A RAB9A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr  X:13,689,128...13,710,504
Ensembl chr  X:13,689,128...13,710,504 		JBrowse link
G RAB9B RAB9B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr  X:103,776,324...103,832,257
Ensembl chr  X:103,822,327...103,832,257 		JBrowse link
G RAC2 Rac family small GTPase 2 located_in TAS Reactome Reactome:R-HSA-5668605 Reactome:R-HSA-5668629 Reactome:R-HSA-6789092 Reactome:R-HSA-9014420 Reactome:R-HSA-9014424 Reactome:R-HSA-9626848 NCBI chr22:37,225,270...37,244,269
Ensembl chr22:37,225,270...37,259,594 		JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 located_in ISO
IEA		 RGD
Ensembl		 PMID:18832707 GO_REF:0000107 RGD:9835043 NCBI chr 9:131,576,775...131,740,076
Ensembl chr 9:131,576,770...131,740,076 		JBrowse link
G RILP Rab interacting lysosomal protein located_in IEA UniProt GO_REF:0000044 NCBI chr17:1,646,150...1,649,866
Ensembl chr17:1,646,145...1,649,866 		JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein located_in TAS Reactome Reactome:R-HSA-8951595 NCBI chr 1:120,150,898...120,176,520
Ensembl chr 1:120,150,898...120,176,520 		JBrowse link
G SLC11A1 solute carrier family 11 member 1 located_in
is_active_in		 IEA
IBA
IDA		 (PMID:12070036) Ensembl
GO_Central
BHF-UCL		 PMID:12070036 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:218,382,273...218,396,894
Ensembl chr 2:218,382,029...218,396,894 		JBrowse link
G SLC15A2 solute carrier family 15 member 2 located_in
is_active_in		 IEA
IDA		 (PMID:20406817) UniProt PMID:20406817 GO_REF:0000044 NCBI chr 3:121,894,401...121,944,188
Ensembl chr 3:121,894,401...121,944,188 		JBrowse link
G SLC48A1 solute carrier family 48 member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr12:47,753,934...47,782,751
Ensembl chr12:47,753,916...47,782,751 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:143,265,222...143,848,468
Ensembl chr 3:143,265,222...143,848,485 		JBrowse link
G SNAP23 synaptosome associated protein 23 located_in TAS Reactome Reactome:R-HSA-8863895 Reactome:R-HSA-8863973 NCBI chr15:42,491,129...42,533,058
Ensembl chr15:42,491,233...42,545,356 		JBrowse link
G STX4 syntaxin 4 located_in TAS Reactome Reactome:R-HSA-8863858 Reactome:R-HSA-8951595 NCBI chr16:31,033,095...31,040,168
Ensembl chr16:31,032,889...31,042,975 		JBrowse link
G SYT7 synaptotagmin 7 located_in IEA UniProt GO_REF:0000044 NCBI chr11:61,513,714...61,588,387
Ensembl chr11:61,513,714...61,581,148 		JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member located_in TAS Reactome Reactome:R-HSA-8951595 NCBI chr 6:32,845,209...32,853,704
Ensembl chr 6:32,845,209...32,853,816 		JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member located_in TAS Reactome Reactome:R-HSA-8951595 NCBI chr 6:32,821,831...32,838,739
Ensembl chr 6:32,821,833...32,838,739 		JBrowse link
G TAPBP TAP binding protein located_in TAS Reactome Reactome:R-HSA-8951595 NCBI chr 6:33,299,694...33,314,078
Ensembl chr 6:33,299,694...33,314,284 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in TAS
IEA		 Reactome
Ensembl		 GO_REF:0000107 Reactome:R-HSA-1222516 NCBI chr11:68,039,025...68,053,762
Ensembl chr11:68,039,025...68,050,895 		JBrowse link
G TLR1 toll like receptor 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 4:38,787,569...38,805,644
Ensembl chr 4:38,787,555...38,856,817 		JBrowse link
G TLR2 toll like receptor 2 located_in IEA UniProt GO_REF:0000044 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,050...153,706,260 		JBrowse link
G TLR6 toll like receptor 6 located_in IEA UniProt GO_REF:0000044 NCBI chr 4:38,822,897...38,868,390
Ensembl chr 4:38,822,897...38,856,817 		JBrowse link
G VAMP3 vesicle associated membrane protein 3 located_in TAS Reactome Reactome:R-HSA-8863973 NCBI chr 1:7,771,296...7,781,432
Ensembl chr 1:7,771,296...7,781,432 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 located_in IEA UniProt GO_REF:0000044 NCBI chr  X:155,881,345...155,943,769
NCBI chr  Y:57,067,865...57,130,289
Ensembl chr  Y:57,067,865...57,130,289
Ensembl chr  X:57,067,865...57,130,289 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 located_in TAS Reactome Reactome:R-HSA-8863973 NCBI chr 2:85,577,586...85,582,031
Ensembl chr 2:85,561,562...85,582,031 		JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM8 ADAM metallopeptidase domain 8 located_in IDA (PMID:17548643) BHF-UCL PMID:17548643 NCBI chr10:133,262,423...133,276,868
Ensembl chr10:133,262,420...133,276,868 		JBrowse link
G NCF1 neutrophil cytosolic factor 1 located_in TAS Reactome Reactome:R-HSA-1236967 Reactome:R-HSA-5668605 Reactome:R-HSA-5668629 Reactome:R-HSA-6789092 Reactome:R-HSA-9014424 Reactome:R-HSA-9626848 NCBI chr 7:74,774,011...74,789,315
Ensembl chr 7:74,774,011...74,789,315 		JBrowse link
G NCF2 neutrophil cytosolic factor 2 located_in TAS Reactome Reactome:R-HSA-1236967 Reactome:R-HSA-5668605 Reactome:R-HSA-5668629 Reactome:R-HSA-6789092 Reactome:R-HSA-9014424 Reactome:R-HSA-9626848 NCBI chr 1:183,555,562...183,601,849
Ensembl chr 1:183,554,461...183,590,905 		JBrowse link
G NCF4 neutrophil cytosolic factor 4 located_in TAS Reactome Reactome:R-HSA-1236967 Reactome:R-HSA-5668605 Reactome:R-HSA-5668629 Reactome:R-HSA-6789092 Reactome:R-HSA-9014424 Reactome:R-HSA-9626848 NCBI chr22:36,861,006...36,878,015
Ensembl chr22:36,860,988...36,878,017 		JBrowse link
G PLA2G5 phospholipase A2 group V located_in ISS UniProt GO_REF:0000024 NCBI chr 1:20,028,408...20,091,911
Ensembl chr 1:20,028,179...20,091,911 		JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:113,297,239...113,323,672
Ensembl chr13:113,297,239...113,323,672 		JBrowse link
G MPEG1 macrophage expressed 1 is_active_in IDA (PMID:31537793) UniProt PMID:31537793 NCBI chr11:59,208,510...59,212,927
Ensembl chr11:59,208,510...59,212,927 		JBrowse link
G SLC48A1 solute carrier family 48 member 1 located_in
is_active_in		 IEA
ISO		 (PMID:23395172) Ensembl
MGI		 PMID:23395172 GO_REF:0000107 NCBI chr12:47,753,934...47,782,751
Ensembl chr12:47,753,916...47,782,751 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21533
    cellular anatomical structure 21182
      cytoplasm 12969
        cytoplasmic vesicle 2744
          endocytic vesicle 387
            phagocytic vesicle 162
              clathrin-coated phagocytic vesicle + 0
              early phagosome + 15
              pexophagosome 0
              phagocytic vesicle lumen + 5
              phagocytic vesicle membrane + 86
              phagolysosome + 8
Path 2
Term Annotations click to browse term
  cellular_component 21533
    cellular anatomical structure 21182
      organelle 16330
        membrane-bounded organelle 15415
          vesicle 4425
            intracellular vesicle 2753
              cytoplasmic vesicle 2744
                endocytic vesicle 387
                  phagocytic vesicle 162
                    clathrin-coated phagocytic vesicle + 0
                    early phagosome + 15
                    pexophagosome 0
                    phagocytic vesicle lumen + 5
                    phagocytic vesicle membrane + 86
                    phagolysosome + 8
paths to the root