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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytic vesicle
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Accession:GO:0045335 term browser browse the term
Definition:A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: phagosome
 xref: Wikipedia:Phagosome
 never_in_taxon: NCBITaxon:4751 ! Fungi

GViewer not supported for the selected species.

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phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 located_in ISO (PMID:15469992) BHF-UCL PMID:15469992 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619 		JBrowse link
G Actg1 actin gamma 1 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955506:1,546,678...1,549,611
Ensembl chrNW_004955506:1,546,678...1,552,105 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452 		JBrowse link
G Anxa11 annexin A11 located_in ISO (PMID:9188810) UniProt PMID:9188810 NCBI chrNW_004955437:13,119,782...13,161,196
Ensembl chrNW_004955437:13,119,782...13,161,536 		JBrowse link
G Atg14 autophagy related 14 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004955466:13,898,311...13,972,506
Ensembl chrNW_004955466:13,898,298...13,972,506 		JBrowse link
G Becn1 beclin 1 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004955451:16,616,595...16,625,731
Ensembl chrNW_004955451:16,616,595...16,625,730 		JBrowse link
G Capg capping actin protein, gelsolin like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955424:2,064,672...2,080,192
Ensembl chrNW_004955424:2,072,035...2,080,086 		JBrowse link
G Cdc42 cell division cycle 42 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955452:2,255,940...2,299,042
Ensembl chrNW_004955452:2,255,117...2,299,042 		JBrowse link
G Cdc42ep2 CDC42 effector protein 2 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955422:19,922,179...19,928,570
Ensembl chrNW_004955422:19,922,179...19,928,570 		JBrowse link
G Cdc42ep4 CDC42 effector protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955553:311,725...335,125
Ensembl chrNW_004955553:313,376...314,422 		JBrowse link
G Clcn3 chloride voltage-gated channel 3 located_in ISO (PMID:16522634) GO_Central PMID:16522634 NCBI chrNW_004955403:36,625,871...36,710,201
Ensembl chrNW_004955403:36,625,770...36,710,201 		JBrowse link
G Coro1a coronin 1A located_in ISO (PMID:17442961) UniProt PMID:17442961 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Ctss cathepsin S located_in ISO (PMID:30612035) UniProt PMID:30612035 NCBI chrNW_004955413:99,279...124,793
Ensembl chrNW_004955413:99,159...124,042 		JBrowse link
G Cybb cytochrome b-245 beta chain located_in ISO (PMID:23303671) ParkinsonsUK-UCL PMID:23303671 NCBI chrNW_004955587:781,533...818,149
Ensembl chrNW_004955587:781,388...819,912 		JBrowse link
G Evl Enah/Vasp-like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955438:21,198,761...21,298,657
Ensembl chrNW_004955438:21,198,763...21,298,657 		JBrowse link
G Flnb filamin B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955430:7,680,394...7,832,124
Ensembl chrNW_004955430:7,680,394...7,832,124 		JBrowse link
G Fmnl1 formin like 1 located_in ISO (PMID:21148482) UniProt PMID:21148482 NCBI chrNW_004955451:17,876,017...17,893,683
Ensembl chrNW_004955451:17,878,839...17,893,475 		JBrowse link
G Gsn gelsolin located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18414680 RGD:2316597 NCBI chrNW_004955408:11,047,679...11,070,492 JBrowse link
G Irgm immunity related GTPase M located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Kif16b kinesin family member 16B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955415:25,449,734...25,740,697
Ensembl chrNW_004955415:25,447,539...25,740,775 		JBrowse link
G Kif5b kinesin family member 5B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955429:23,632,246...23,678,797
Ensembl chrNW_004955429:23,631,282...23,678,562 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 located_in ISO (PMID:22190682) AgBase PMID:22190682 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379 		JBrowse link
G Mpeg1 macrophage expressed 1 located_in ISO (PMID:26402460) UniProt PMID:26402460 NCBI chrNW_004955511:3,783,200...3,787,300
Ensembl chrNW_004955511:3,785,019...3,787,154 		JBrowse link
G Mtor mechanistic target of rapamycin kinase located_in ISO (PMID:27623384) UniProt PMID:27623384 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694 		JBrowse link
G Myh9 myosin heavy chain 9 located_in ISO RGD PMID:19117932 RGD:6902913 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450 		JBrowse link
G Myo18a myosin XVIIIA located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955481:4,020,274...4,115,014
Ensembl chrNW_004955481:4,028,706...4,113,878 		JBrowse link
G Myo1c myosin IC located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955481:1,676,788...1,701,421
Ensembl chrNW_004955481:1,676,728...1,703,488 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 located_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 located_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004955402:28,081,150...28,195,305
Ensembl chrNW_004955402:28,081,098...28,196,252 		JBrowse link
G Pld4 phospholipase D family member 4 located_in ISO (PMID:22102906) MGI PMID:22102906 NCBI chrNW_004955538:3,296,581...3,303,187
Ensembl chrNW_004955538:3,295,937...3,303,802 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955450:9,638,761...9,656,291
Ensembl chrNW_004955450:9,638,761...9,656,603 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955563:1,008,267...1,017,315
Ensembl chrNW_004955563:1,008,769...1,017,315 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955424:12,506,738...12,544,284
Ensembl chrNW_004955424:12,506,854...12,542,229 		JBrowse link
G Rab12 RAB12, member RAS oncogene family located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955402:3,102,709...3,109,701
Ensembl chrNW_004955402:3,103,708...3,110,701 		JBrowse link
G Rab14 RAB14, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955419:6,790,110...6,812,870
Ensembl chrNW_004955419:6,790,707...6,812,870 		JBrowse link
G Rab20 RAB20, member RAS oncogene family located_in ISO (PMID:21255211)
(PMID:19144319)		 UniProt
MGI		 PMID:19144319 PMID:21255211 NCBI chrNW_004955404:2,087,580...2,088,545 JBrowse link
G Rab22a RAB22A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955445:1,167,941...1,224,932
Ensembl chrNW_004955445:1,174,817...1,225,763 		JBrowse link
G Rab23 RAB23, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955502:2,947,170...2,980,634
Ensembl chrNW_004955502:2,950,562...2,980,634 		JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955402:2,354,399...2,446,537
Ensembl chrNW_004955402:2,354,646...2,446,453 		JBrowse link
G Rab32 RAB32, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955436:14,171,123...14,177,255
Ensembl chrNW_004955436:14,171,123...14,177,577 		JBrowse link
G Rab34 RAB34, member RAS oncogene family located_in ISO (PMID:21255211)
(PMID:23197834)		 UniProt
ParkinsonsUK-UCL		 PMID:21255211 PMID:23197834 NCBI chrNW_004955481:4,441,290...4,445,969
Ensembl chrNW_004955481:4,441,407...4,445,969 		JBrowse link
G Rab38 RAB38, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955414:5,158,860...5,214,108
Ensembl chrNW_004955414:5,158,261...5,215,698 		JBrowse link
G Rab39a RAB39A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955412:10,224,074...10,240,270
Ensembl chrNW_004955412:10,224,074...10,240,270 		JBrowse link
G Rab43 RAB43, member RAS oncogene family located_in ISO (PMID:21255211)
(PMID:19144319)		 UniProt
MGI		 PMID:19144319 PMID:21255211 NCBI chrNW_004955429:13,474,460...13,506,979
Ensembl chrNW_004955429:13,474,460...13,506,979 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in ISO (PMID:22493499), (PMID:25568335) MGI PMID:22493499 PMID:25568335 NCBI chrNW_004955430:11,991,548...12,040,003 JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Rab7b RAB7B, member RAS oncogene family located_in ISO (PMID:21255211)
(PMID:19144319)		 UniProt
MGI		 PMID:19144319 PMID:21255211 NCBI chrNW_004955406:41,615,302...41,638,157
Ensembl chrNW_004955406:41,615,302...41,638,151 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955524:1,403,811...1,416,005
Ensembl chrNW_004955524:1,403,811...1,416,005 		JBrowse link
G Rab8b RAB8B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955450:12,026,784...12,095,332
Ensembl chrNW_004955450:12,026,784...12,095,422 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955519:4,489,159...4,496,089
Ensembl chrNW_004955519:4,489,159...4,496,089 		JBrowse link
G Rab9b RAB9B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chrNW_004955548:825,208...829,815 JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004955435:15,090,521...15,171,397
Ensembl chrNW_004955435:15,150,827...15,171,397 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein located_in ISO (PMID:27288407) UniProt PMID:27288407 NCBI chrNW_004955467:10,547,706...10,578,355
Ensembl chrNW_004955467:10,547,294...10,578,387 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004955468:12,336,744...12,383,917
Ensembl chrNW_004955468:12,334,307...12,370,334 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 located_in ISO (PMID:21148482) UniProt PMID:21148482 NCBI chrNW_004955406:41,801,235...42,050,731
Ensembl chrNW_004955406:41,801,235...42,050,731 		JBrowse link
G Stx11 syntaxin 11 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955436:16,303,169...16,327,854
Ensembl chrNW_004955436:16,303,189...16,327,854 		JBrowse link
G Stx12 syntaxin 12 located_in ISO (PMID:15469992) BHF-UCL PMID:15469992 NCBI chrNW_004955452:6,977,813...7,015,281
Ensembl chrNW_004955452:6,977,101...7,015,281 		JBrowse link
G Stx6 syntaxin 6 located_in ISO (PMID:22190682) AgBase PMID:22190682 NCBI chrNW_004955406:20,042,552...20,089,853
Ensembl chrNW_004955406:20,048,155...20,089,906 		JBrowse link
G Stx8 syntaxin 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955467:7,524,223...7,789,630
Ensembl chrNW_004955467:7,523,464...7,792,056 		JBrowse link
G Stxbp1 syntaxin binding protein 1 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955419:963,829...1,000,759
Ensembl chrNW_004955419:963,829...1,000,759 		JBrowse link
G Stxbp2 syntaxin binding protein 2 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955563:1,617,621...1,624,441
Ensembl chrNW_004955563:1,617,621...1,624,441 		JBrowse link
G Stxbp3 syntaxin binding protein 3 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955435:12,215,665...12,270,769
Ensembl chrNW_004955435:12,215,665...12,274,465 		JBrowse link
G Stxbp4 syntaxin binding protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955451:7,463,285...7,635,690
Ensembl chrNW_004955451:7,466,314...7,619,277 		JBrowse link
G Syt11 synaptotagmin 11 located_in ISO (PMID:25063865) ParkinsonsUK-UCL PMID:25063865 NCBI chrNW_004955545:2,054,720...2,074,526
Ensembl chrNW_004955545:2,054,721...2,074,526 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in ISO (PMID:19549681) MGI PMID:19549681 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
G Tlr9 toll like receptor 9 located_in ISO (PMID:18820679) UniProt PMID:18820679 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Uvrag UV radiation resistance associated located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chrNW_004955414:15,733,116...16,043,555
Ensembl chrNW_004955414:15,731,519...16,043,555 		JBrowse link
G Vamp3 vesicle associated membrane protein 3 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955486:5,103,228...5,112,157
Ensembl chrNW_004955486:5,103,106...5,112,176 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955406:12,223,736...12,260,506
Ensembl chrNW_004955406:12,223,736...12,260,317 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 located_in ISO (PMID:15470500) UniProt PMID:15470500 NCBI chrNW_004955594:20,496...72,648
Ensembl chrNW_004955594:18,727...72,654 		JBrowse link
G Vamp8 vesicle associated membrane protein 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728 		JBrowse link
G Vim vimentin located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554 		JBrowse link
G Vps26b VPS26, retromer complex component B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955412:35,035,730...35,061,441
Ensembl chrNW_004955412:35,035,208...35,061,441 		JBrowse link
G Was WASP actin nucleation promoting factor located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955543:243,618...253,489
Ensembl chrNW_004955543:247,631...253,274 		JBrowse link
G Zdhhc5 zDHHC palmitoyltransferase 5 located_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004955511:2,597,353...2,625,139
Ensembl chrNW_004955511:2,601,803...2,624,151 		JBrowse link
G Zyx zyxin located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004955494:268,844...277,381
Ensembl chrNW_004955494:269,222...276,904 		JBrowse link
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004955430:6,986,977...7,018,938
Ensembl chrNW_004955430:6,986,759...7,018,938 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004955405:39,503,020...39,540,069
Ensembl chrNW_004955405:39,503,020...39,540,335 		JBrowse link
G Pla2g5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chrNW_004955452:662,281...721,507
Ensembl chrNW_004955452:710,271...723,142 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004955430:11,991,548...12,040,003 JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in ISO (PMID:35716776) UniProt PMID:35716776 NCBI chrNW_004955508:2,060,078...2,671,792
Ensembl chrNW_004955508:2,090,609...2,670,240 		JBrowse link
G Snx3 sorting nexin 3 located_in ISO (PMID:23237080) UniProt PMID:23237080 NCBI chrNW_004955411:33,339,974...33,344,563
Ensembl chrNW_004955411:33,340,274...33,345,500 		JBrowse link
G Syk spleen associated tyrosine kinase located_in ISO (PMID:15845454) UniProt PMID:15845454 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Syt11 synaptotagmin 11 located_in ISO (PMID:23303671), (PMID:28686317) UniProt PMID:23303671 PMID:28686317 NCBI chrNW_004955545:2,054,720...2,074,526
Ensembl chrNW_004955545:2,054,721...2,074,526 		JBrowse link
G Syt7 synaptotagmin 7 located_in ISO (PMID:16982801) UniProt PMID:16982801 NCBI chrNW_004955511:6,051,392...6,093,651
Ensembl chrNW_004955511:6,051,386...6,093,651 		JBrowse link
G Tlr7 toll like receptor 7 located_in ISO (PMID:18305481) UniProt PMID:18305481 NCBI chrNW_004955544:424,897...443,562
Ensembl chrNW_004955544:424,850...443,564 		JBrowse link
G Tlr9 toll like receptor 9 located_in ISO (PMID:18305481) UniProt PMID:18305481 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator located_in ISO (PMID:18305481) UniProt PMID:18305481 NCBI chrNW_004955422:17,814,174...17,823,945
Ensembl chrNW_004955422:17,814,079...17,824,190 		JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:27219021) UniProt PMID:27219021 NCBI chrNW_004955405:39,503,020...39,540,069
Ensembl chrNW_004955405:39,503,020...39,540,335 		JBrowse link
G Mtmr4 myotubularin related protein 4 is_active_in ISO (PMID:31543504) UniProt PMID:31543504 NCBI chrNW_004955451:4,531,966...4,557,528
Ensembl chrNW_004955451:4,532,295...4,558,225 		JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chrNW_004955402:2,354,399...2,446,537
Ensembl chrNW_004955402:2,354,646...2,446,453 		JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa3 annexin A3 located_in ISO (PMID:7526843) UniProt PMID:7526843 NCBI chrNW_004955433:2,981,113...3,043,894
Ensembl chrNW_004955433:2,977,513...3,044,446 		JBrowse link
G Clec4e C-type lectin domain family 4 member E is_active_in ISO (PMID:18490740) UniProt PMID:18490740 NCBI chrNW_004955413:5,256,523...5,261,385
Ensembl chrNW_004955413:5,256,440...5,262,938 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 located_in ISO (PMID:10485905) UniProt PMID:10485905 NCBI chrNW_004955477:863,388...899,703 JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 located_in ISO (PMID:24415791) UniProt PMID:24415791 NCBI chrNW_004955482:7,529,009...7,563,273
Ensembl chrNW_004955482:7,529,277...7,538,363 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 located_in ISO (PMID:9670047) MGI PMID:9670047 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622 		JBrowse link
G Mpeg1 macrophage expressed 1 is_active_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chrNW_004955511:3,783,200...3,787,300
Ensembl chrNW_004955511:3,785,019...3,787,154 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing located_in ISO (PMID:30612035) UniProt PMID:30612035 NCBI chrNW_004955457:6,749,226...6,841,855
Ensembl chrNW_004955457:6,748,534...6,842,489 		JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in ISO (PMID:29378918) UniProt PMID:29378918 NCBI chrNW_004955550:1,275,921...1,279,262
Ensembl chrNW_004955550:1,275,921...1,279,270 		JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in ISO (PMID:29378918) UniProt PMID:29378918 NCBI chrNW_004955417:7,769,365...7,825,892
Ensembl chrNW_004955417:7,771,218...7,825,799 		JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004955513:1,224,418...1,328,176
Ensembl chrNW_004955513:1,226,205...1,315,922 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 located_in ISO (PMID:12070036)
(PMID:11067873), (PMID:9034150), (PMID:9271100)		 BHF-UCL
MGI		 PMID:9034150 PMID:9271100 PMID:11067873 PMID:12070036 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 is_active_in ISO (PMID:20406817) UniProt PMID:20406817 NCBI chrNW_004955427:21,221,778...21,255,725
Ensembl chrNW_004955427:21,221,750...21,255,725 		JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in ISO (PMID:35716776) UniProt PMID:35716776 NCBI chrNW_004955508:2,060,078...2,671,792
Ensembl chrNW_004955508:2,090,609...2,670,240 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in ISO (PMID:19549681) MGI PMID:19549681 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003 		JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 located_in ISO (PMID:17548643) BHF-UCL PMID:17548643 NCBI chrNW_004955477:10,894,288...10,906,961
Ensembl chrNW_004955477:10,895,446...10,907,215 		JBrowse link
G Pla2g5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chrNW_004955452:662,281...721,507
Ensembl chrNW_004955452:710,271...723,142 		JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp1 lysosomal associated membrane protein 1 located_in ISO (PMID:23395172) MGI PMID:23395172 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379 		JBrowse link
G Mpeg1 macrophage expressed 1 is_active_in ISO (PMID:31537793) UniProt PMID:31537793 NCBI chrNW_004955511:3,783,200...3,787,300
Ensembl chrNW_004955511:3,785,019...3,787,154 		JBrowse link
G Slc48a1 solute carrier family 48 member 1 is_active_in ISO (PMID:23395172) MGI PMID:23395172 NCBI chrNW_004955500:6,675,631...6,691,942
Ensembl chrNW_004955500:6,679,908...6,691,942 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12840
    cellular anatomical structure 12687
      cytoplasm 8530
        cytoplasmic vesicle 1520
          endocytic vesicle 181
            phagocytic vesicle 101
              clathrin-coated phagocytic vesicle + 0
              early phagosome + 14
              pexophagosome 0
              phagocytic vesicle lumen + 0
              phagocytic vesicle membrane + 19
              phagolysosome + 5
Path 2
Term Annotations click to browse term
  cellular_component 12840
    cellular anatomical structure 12687
      organelle 10122
        membrane-bounded organelle 9279
          vesicle 1653
            intracellular vesicle 1527
              cytoplasmic vesicle 1520
                endocytic vesicle 181
                  phagocytic vesicle 101
                    clathrin-coated phagocytic vesicle + 0
                    early phagosome + 14
                    pexophagosome 0
                    phagocytic vesicle lumen + 0
                    phagocytic vesicle membrane + 19
                    phagolysosome + 5
paths to the root