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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytic vesicle
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Accession:GO:0045335 term browser browse the term
Definition:A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: phagosome
 xref: Wikipedia:Phagosome
 never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188 		JBrowse link
G ACTG1 actin gamma 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,965,911...75,968,822
Ensembl chr17:81,668,221...81,671,087 		JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,355,026...46,556,091
Ensembl chr11:46,905,454...47,103,205 		JBrowse link
G ANXA11 annexin A11 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:76,065,939...76,116,400
Ensembl chr10:78,724,086...78,775,037 		JBrowse link
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 3:57,161,299...57,206,672
Ensembl chr 3:58,370,430...58,415,258 		JBrowse link
G ATG14 autophagy related 14 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chr14:35,953,228...35,998,650
Ensembl chr14:54,226,720...54,272,018 		JBrowse link
G BECN1 beclin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286 		JBrowse link
G CAPG capping actin protein, gelsolin like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr2A:85,447,296...85,466,677
Ensembl chr2A:86,997,891...87,016,263 		JBrowse link
G CDC42 cell division cycle 42 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G CDC42EP2 CDC42 effector protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,679,582...60,686,763
Ensembl chr11:64,024,281...64,024,913 		JBrowse link
G CDC42EP4 CDC42 effector protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:67,212,571...67,239,844 JBrowse link
G CLCN3 chloride voltage-gated channel 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:161,838,061...161,943,072
Ensembl chr 4:173,925,474...174,011,681 		JBrowse link
G CORO1A coronin 1A located_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,550,383...30,556,196 JBrowse link
G CTSS cathepsin S located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,084,249...126,118,221
Ensembl chr 1:129,733,996...129,768,318 		JBrowse link
G CYBB cytochrome b-245 beta chain located_in ISO (PMID:23303671) ParkinsonsUK-UCL PMID:23303671 NCBI chr  X:30,230,394...30,267,379
Ensembl chr  X:37,939,704...37,973,183 		JBrowse link
G DNAJC27 DnaJ heat shock protein family (Hsp40) member C27 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:24,937,091...24,965,423
Ensembl chr2A:25,032,836...25,061,149 		JBrowse link
G EVL Enah/Vasp-like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr14:80,594,889...80,767,652
Ensembl chr14:100,005,645...100,084,598 		JBrowse link
G FLNB filamin B located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,943,263...58,107,115
Ensembl chr 3:59,359,234...59,521,989 		JBrowse link
G FMNL1 formin like 1 located_in ISO (PMID:21148482) UniProt PMID:21148482 NCBI chr17:12,080,723...12,106,157
Ensembl chr17:12,253,234...12,269,446 		JBrowse link
G GSN gelsolin located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831 		JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18414680 RGD:2316597 NCBI chr 5:152,429,337...152,459,800
Ensembl chr 5:158,413,073...158,442,481 		JBrowse link
G IRGM immunity related GTPase M located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 5:146,274,097...146,329,979
Ensembl chr 5:152,278,581...152,308,182 		JBrowse link
G KIF16B kinesin family member 16B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr20:16,229,429...16,532,735
Ensembl chr20:16,210,821...16,512,618 		JBrowse link
G KIF5B kinesin family member 5B located_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,138,964...32,186,448
Ensembl chr10:32,731,150...32,778,242 		JBrowse link
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,442,507...94,464,061
Ensembl chr13:113,507,401...113,530,457 		JBrowse link
G LOC100986336 twinfilin-2 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chr 3:52,163,388...52,181,473
Ensembl chr 3:53,400,191...53,410,743
Ensembl chr 3:53,400,191...53,410,743 		JBrowse link
G MPEG1 macrophage expressed 1 located_in ISO (PMID:26402460) UniProt PMID:26402460 NCBI chr11:54,425,904...54,442,631
Ensembl chr11:57,880,109...57,882,259 		JBrowse link
G MTOR mechanistic target of rapamycin kinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841 		JBrowse link
G MYH9 myosin heavy chain 9 located_in ISO RGD PMID:19117932 RGD:6902913 NCBI chr22:17,200,623...17,305,826
Ensembl chr22:35,039,101...35,121,618 		JBrowse link
G MYO18A myosin XVIIIA located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:27,593,787...27,700,801
Ensembl chr17:28,116,279...28,208,301 		JBrowse link
G MYO1C myosin IC located_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,446,506...1,475,634
Ensembl chr17:1,345,143...1,375,540 		JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,060,245...31,109,012
Ensembl chr 7:31,182,275...31,208,742 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:35,203,896...35,336,512
Ensembl chr18:38,754,789...38,882,037 		JBrowse link
G PLD4 phospholipase D family member 4 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:85,574,724...85,587,176
Ensembl chr14:105,360,584...105,369,247 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr15:44,810,880...44,833,438
Ensembl chr15:63,088,084...63,108,077 		JBrowse link
G RAB11B RAB11B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chr19:7,676,095...7,690,177 JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:73,126,262...73,165,892
Ensembl chr2A:74,620,821...74,657,419 		JBrowse link
G RAB12 RAB12, member RAS oncogene family located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr18:5,646,023...5,675,920
Ensembl chr18:7,972,938...8,027,500 		JBrowse link
G RAB14 RAB14, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,305,656...92,329,419
Ensembl chr 9:120,654,180...120,666,170 		JBrowse link
G RAB20 RAB20, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr13:91,660,142...91,698,215
Ensembl chr13:110,778,119...110,815,408 		JBrowse link
G RAB22A RAB22A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,655,014...54,714,349
Ensembl chr20:55,929,801...55,983,009 		JBrowse link
G RAB23 RAB23, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,744,948...56,780,187
Ensembl chr 6:58,375,559...58,411,107 		JBrowse link
G RAB28 RAB28, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:7,793,007...7,901,614
Ensembl chr 4:13,093,806...13,202,569 		JBrowse link
G RAB29 RAB29, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:181,377,018...181,384,496
Ensembl chr 1:185,661,317...185,668,066 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr18:4,424,677...4,578,263
Ensembl chr18:6,710,174...6,859,896 		JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr 6:149,053,138...149,069,059 JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:144,339,323...144,354,885 JBrowse link
G RAB34 RAB34, member RAS oncogene family located_in ISO (PMID:21255211)
(PMID:23197834)		 UniProt
ParkinsonsUK-UCL		 PMID:21255211 PMID:23197834 NCBI chr17:28,057,077...28,061,234
Ensembl chr17:28,562,118...28,566,242 		JBrowse link
G RAB38 RAB38, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:83,121,858...83,183,698
Ensembl chr11:86,710,358...86,773,142 		JBrowse link
G RAB39A RAB39A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr11:102,814,825...102,851,700
Ensembl chr11:106,291,348...106,326,587 		JBrowse link
G RAB43 RAB43, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,145,723...126,179,989
Ensembl chr 3:133,504,093...133,538,331 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in ISO (PMID:22493499), (PMID:25568335) MGI PMID:22493499 PMID:25568335 NCBI chr 3:19,866,110...19,903,701
Ensembl chr 3:20,197,067...20,234,579 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chr 3:125,784,604...125,873,051 JBrowse link
G RAB7B RAB7B, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:181,584,814...181,611,831
Ensembl chr 1:185,867,145...185,894,691 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr19:15,598,029...15,619,988
Ensembl chr19:16,580,720...16,602,189 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr15:42,136,776...42,214,792
Ensembl chr15:60,432,749...60,510,547 		JBrowse link
G RAB9A RAB9A, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:6,296,483...6,317,826
Ensembl chr  X:13,604,454...13,605,059 		JBrowse link
G RAB9B RAB9B, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:93,060,899...93,070,911
Ensembl chr  X:103,444,776...103,445,381 		JBrowse link
G RAP1A RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chr 1:114,279,255...114,376,977
Ensembl chr 1:125,971,598...125,994,813 		JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein located_in IEA Ensembl GO_REF:0000107 NCBI chr17:5,258,376...5,283,747
Ensembl chr17:5,247,307...5,270,817 		JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 located_in ISO (PMID:22493499) MGI PMID:22493499 NCBI chr 1:135,963,748...136,002,982
Ensembl chr 1:139,888,772...139,925,461 		JBrowse link
G SNX3 sorting nexin 3 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:106,010,633...106,063,331
Ensembl chr 6:109,874,105...109,924,185 		JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,808,318...182,064,583
Ensembl chr 1:186,092,113...186,346,019 		JBrowse link
G STX11 syntaxin 11 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 6:141,924,656...141,974,579
Ensembl chr 6:146,688,670...146,689,533 		JBrowse link
G STX12 syntaxin 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,035,807...27,086,825
Ensembl chr 1:28,076,625...28,130,032 		JBrowse link
G STX4 syntaxin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,917,576...23,933,884
Ensembl chr16:31,400,915...31,411,364 		JBrowse link
G STX6 syntaxin 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:156,450,202...156,500,143
Ensembl chr 1:160,117,825...160,167,314 		JBrowse link
G STX8 syntaxin 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,076,600...42,403,334
Ensembl chr17:46,816,859...47,141,816 		JBrowse link
G STXBP1 syntaxin binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,731,527...98,811,608
Ensembl chr 9:127,434,080...127,486,152 		JBrowse link
G STXBP2 syntaxin binding protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,926,833...6,937,385
Ensembl chr19:7,781,830...7,792,038 		JBrowse link
G STXBP3 syntaxin binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,120,487...111,185,669
Ensembl chr 1:110,287,374...110,351,616 		JBrowse link
G STXBP4 syntaxin binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:49,058,071...49,253,448
Ensembl chr17:53,923,387...54,118,415 		JBrowse link
G SYT11 synaptotagmin 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,193,999...131,218,752
Ensembl chr 1:135,026,032...135,046,943 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327 		JBrowse link
G UVRAG UV radiation resistance associated located_in IEA Ensembl GO_REF:0000107 NCBI chr11:70,870,341...71,197,559
Ensembl chr11:74,172,919...74,496,046 		JBrowse link
G VAMP3 vesicle associated membrane protein 3 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 1:6,534,115...6,544,275 JBrowse link
G VAMP4 vesicle associated membrane protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:147,192,001...147,233,945
Ensembl chr 1:150,903,134...150,944,815 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 located_in ISO (PMID:15470500) UniProt PMID:15470500 NCBI chr  X:145,362,432...145,425,097
Ensembl chr  X:155,257,185...155,320,215 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr2A:85,627,678...85,632,205
Ensembl chr2A:87,180,681...87,185,195 		JBrowse link
G VIM vimentin located_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642 		JBrowse link
G VPS26B VPS26 retromer complex component B located_in IEA Ensembl GO_REF:0000107 NCBI chr11:129,077,964...129,100,936
Ensembl chr11:132,936,077...132,958,364 		JBrowse link
G WAS WASP actin nucleation promoting factor located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,982,132...40,989,767
Ensembl chr  X:48,842,765...48,850,380 		JBrowse link
G ZDHHC5 zDHHC palmitoyltransferase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,908,693...52,942,028
Ensembl chr11:56,379,608...56,413,400 		JBrowse link
G ZYX zyxin located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:135,375,816...135,385,871
Ensembl chr 7:147,865,440...147,875,017 		JBrowse link
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,161,299...57,206,672
Ensembl chr 3:58,370,430...58,415,258 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:102,755,388...102,818,686
Ensembl chr12:106,151,969...106,206,879 		JBrowse link
G LOC100986336 twinfilin-2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:52,163,388...52,181,473
Ensembl chr 3:53,400,191...53,410,743
Ensembl chr 3:53,400,191...53,410,743 		JBrowse link
G PLA2G5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chr 1:18,983,104...19,046,834
Ensembl chr 1:20,068,110...20,089,840 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chr 3:19,866,110...19,903,701
Ensembl chr 3:20,197,067...20,234,579 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:140,292,336...140,875,991
Ensembl chr 3:147,980,965...148,466,151 		JBrowse link
G SNX3 sorting nexin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,010,633...106,063,331
Ensembl chr 6:109,874,105...109,924,185 		JBrowse link
G SYK spleen associated tyrosine kinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
G SYT11 synaptotagmin 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:131,193,999...131,218,752
Ensembl chr 1:135,026,032...135,046,943 		JBrowse link
G SYT7 synaptotagmin 7 located_in ISO (PMID:16982801) UniProt PMID:16982801 NCBI chr11:56,814,694...56,880,439
Ensembl chr11:60,175,403...60,242,375 		JBrowse link
G TLR7 toll like receptor 7 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:5,479,247...5,504,810
Ensembl chr  X:12,767,981...12,790,517 		JBrowse link
G UNC13B unc-13 homolog B located_in ISO (PMID:23197834) ParkinsonsUK-UCL PMID:23197834 NCBI chr 9:35,011,350...35,255,148
Ensembl chr 9:35,817,353...36,059,894 		JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator located_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,073,076...63,086,078
Ensembl chr11:66,382,059...66,394,541 		JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:102,755,388...102,818,686
Ensembl chr12:106,151,969...106,206,879 		JBrowse link
G MTMR4 myotubularin related protein 4 is_active_in ISO (PMID:31543504) UniProt PMID:31543504 NCBI chr17:52,564,455...52,592,899
Ensembl chr17:57,418,229...57,446,545 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in ISO (PMID:25568335) UniProt PMID:25568335 NCBI chr18:4,424,677...4,578,263
Ensembl chr18:6,710,174...6,859,896 		JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA3 annexin A3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:45,585,873...45,644,783
Ensembl chr 4:51,432,846...51,491,677 		JBrowse link
G CLEC4E C-type lectin domain family 4 member E is_active_in ISO (PMID:18490740) UniProt PMID:18490740 NCBI chr12:8,620,618...8,627,610 JBrowse link
G CORO1A coronin 1A located_in IEA UniProt GO_REF:0000044 Ensembl chr16:30,550,383...30,556,196 JBrowse link
G DMBT1 deleted in malignant brain tumors 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:119,129,440...119,200,232
Ensembl chr10:122,540,855...123,474,497 		JBrowse link
G HVCN1 hydrogen voltage gated channel 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:108,217,516...108,258,210
Ensembl chr12:111,591,050...111,645,632 		JBrowse link
G INPP5B inositol polyphosphate-5-phosphatase B located_in IEA UniProt GO_REF:0000044 NCBI chr 1:37,135,442...37,220,721
Ensembl chr 1:38,485,163...38,567,704 		JBrowse link
G LAMP2 lysosomal associated membrane protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:109,700,185...109,743,579
Ensembl chr  X:119,886,982...119,929,896 		JBrowse link
G LOC100979338 putative HLA class I histocompatibility antigen, alpha chain H located_in IEA UniProt GO_REF:0000117 NCBI chr 6:29,663,779...29,667,352
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G LOC100982294 class I histocompatibility antigen, Gogo-C*0202 alpha chain located_in IEA UniProt GO_REF:0000117 NCBI chr 6:31,020,373...31,024,959
Ensembl chr 6:31,910,788...31,914,286 		JBrowse link
G LOC100982859 class I histocompatibility antigen, Gogo-B*0101 alpha chain located_in IEA UniProt GO_REF:0000117 NCBI chr 6:31,106,562...31,109,933
Ensembl chr 6:31,997,381...32,000,067 		JBrowse link
G LOC100993063 macrophage-expressed gene 1 protein-like located_in IEA UniProt GO_REF:0000044 NCBI chr11:54,505,587...54,508,256 JBrowse link
G MHC-A patr class I histocompatibility antigen, A-2 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chr 6:29,718,578...29,721,648
Ensembl chr 6:30,333,360...30,391,211 		JBrowse link
G MPEG1 macrophage expressed 1 located_in
is_active_in		 IEA
ISO		 (PMID:37347855) UniProt
UniProt		 PMID:37347855 GO_REF:0000044 NCBI chr11:54,425,904...54,442,631
Ensembl chr11:57,880,109...57,882,259 		JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase located_in IEA UniProt GO_REF:0000044 NCBI chr  X:118,670,612...118,721,108
Ensembl chr  X:128,968,760...129,018,157 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing located_in IEA Ensembl GO_REF:0000107 NCBI chr2B:95,505,376...95,597,792
Ensembl chr2B:213,628,997...213,721,299 		JBrowse link
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr14:1,332,403...1,336,157
Ensembl chr14:19,384,634...19,388,140 		JBrowse link
G PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:87,657,202...87,704,355
Ensembl chr 8:89,611,726...89,639,419 		JBrowse link
G RAB28 RAB28, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 4:7,793,007...7,901,614
Ensembl chr 4:13,093,806...13,202,569 		JBrowse link
G RAB9A RAB9A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr  X:6,296,483...6,317,826
Ensembl chr  X:13,604,454...13,605,059 		JBrowse link
G RAB9B RAB9B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr  X:93,060,899...93,070,911
Ensembl chr  X:103,444,776...103,445,381 		JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chr 9:102,698,970...102,861,482
Ensembl chr 9:131,337,001...131,495,664 		JBrowse link
G SLC11A1 solute carrier family 11 member 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:105,640,613...105,655,524
Ensembl chr2B:224,238,284...224,252,941 		JBrowse link
G SLC15A2 solute carrier family 15 member 2 is_active_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,996,023...119,044,423
Ensembl chr 3:125,902,978...125,951,963 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:140,292,336...140,875,991
Ensembl chr 3:147,980,965...148,466,151 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:63,120,913...63,132,831
Ensembl chr11:66,429,435...66,441,327 		JBrowse link
G TLR2 toll like receptor 2 located_in IEA UniProt GO_REF:0000044 NCBI chr 4:146,024,653...146,091,388
Ensembl chr 4:157,866,977...157,869,331 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 located_in IEA UniProt GO_REF:0000044 NCBI chr  X:145,362,432...145,425,097
Ensembl chr  X:155,257,185...155,320,215 		JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM8 ADAM metallopeptidase domain 8 located_in IEA Ensembl GO_REF:0000107 Ensembl chr10:134,172,724...134,186,227 JBrowse link
G PLA2G5 phospholipase A2 group V located_in ISO (PMID:16407308) UniProt PMID:16407308 NCBI chr 1:18,983,104...19,046,834
Ensembl chr 1:20,068,110...20,089,840 		JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,442,507...94,464,061
Ensembl chr13:113,507,401...113,530,457 		JBrowse link
G MPEG1 macrophage expressed 1 is_active_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,425,904...54,442,631
Ensembl chr11:57,880,109...57,882,259 		JBrowse link
G SLC48A1 solute carrier family 48 member 1 is_active_in ISO (PMID:23395172) MGI PMID:23395172 NCBI chr12:40,950,511...40,977,994 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20337
    cellular anatomical structure 19903
      cytoplasm 11373
        cytoplasmic vesicle 1845
          endocytic vesicle 209
            phagocytic vesicle 115
              clathrin-coated phagocytic vesicle + 0
              early phagosome + 15
              pexophagosome 0
              phagocytic vesicle lumen + 0
              phagocytic vesicle membrane + 32
              phagolysosome + 5
Path 2
Term Annotations click to browse term
  cellular_component 20337
    cellular anatomical structure 19903
      organelle 14896
        membrane-bounded organelle 13440
          vesicle 2040
            intracellular vesicle 1855
              cytoplasmic vesicle 1845
                endocytic vesicle 209
                  phagocytic vesicle 115
                    clathrin-coated phagocytic vesicle + 0
                    early phagosome + 15
                    pexophagosome 0
                    phagocytic vesicle lumen + 0
                    phagocytic vesicle membrane + 32
                    phagolysosome + 5
paths to the root