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ONTOLOGY REPORT - ANNOTATIONS


Term:external encapsulating structure organization
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Accession:GO:0045229 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.
Synonyms:exact_synonym: external encapsulating structure organisation;   external encapsulating structure organization and biogenesis



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basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:47,835,492...47,902,585 JBrowse link
G Lamb2 laminin subunit beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,178,367...109,190,552 JBrowse link
G Lamb3 laminin subunit beta 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:104,833,810...104,875,405 JBrowse link
G Megf9 multiple EGF-like-domains 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:83,993,565...84,105,622 JBrowse link
G Ntn4 netrin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:28,186,611...28,300,390 JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3620600|MGI:3620601|MGI:3620603 (PMID:16467571)
Ensembl
RGD
PMID:16467571 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945 JBrowse link
G Pxdn peroxidasin involved_in
acts_upstream_of
ISO (PMID:25708780), (PMID:27697841), (PMID:32571911)
(PMID:22842973), (PMID:25708780), (PMID:32571911)
(PMID:32543734)
RGD PMID:22842973 PMID:25708780 PMID:27697841 PMID:32543734 PMID:32571911 NCBI chr 6:46,580,749...46,658,345 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956 JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cma1 chymase 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr15:33,387,351...33,390,133 JBrowse link
G Ctss cathepsin S involved_in ISO
IEA
(PMID:22952693)
GO_REF:0000107
RGD
Ensembl
PMID:22952693 GO_REF:0000107 NCBI chr 2:185,775,316...185,803,440 JBrowse link
G Hpn hepsin involved_in ISO
IEA
ISS
(PMID:16908524)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16908524 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,337,085...86,352,785 JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (PMID:11884617)
Ensembl
RGD
PMID:11884617 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616 JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180372 (PMID:11884617)
Ensembl
RGD
PMID:11884617 GO_REF:0000107 NCBI chr 4:46,582,681...46,590,058 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) RGD PMID:22235340 NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:18160688), (PMID:19949034), (PMID:23065703) RGD PMID:18160688 PMID:19949034 PMID:23065703 NCBI chr16:84,885,597...84,996,482 JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:25158062) RGD PMID:25158062 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO MGI:1934902 (PMID:23217742) RGD PMID:23217742 NCBI chr 8:117,769,517...117,834,347 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:26024086) RGD PMID:26024086 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:24681597) RGD PMID:24681597 NCBI chr 3:120,171,301...120,213,555 JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4835411 (PMID:28039900) RGD PMID:28039900 NCBI chr 1:77,479,641...77,486,954 JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412 JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21350012)
UniProt
RGD
PMID:21350012 GO_REF:0000024 NCBI chr 6:114,777,547...114,872,688 JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO MGI:2384087 (PMID:9811848) RGD PMID:9811848 NCBI chr 6:10,952,329...11,160,288 JBrowse link
G Gas2 growth arrest-specific 2 acts_upstream_of_or_within ISO MGI:6187669 (PMID:27734842) RGD PMID:27734842 NCBI chr 1:101,452,361...101,582,619 JBrowse link
G Hmcn1 hemicentin 1 involved_in ISO (PMID:34504132) RGD PMID:34504132 NCBI chr13:65,165,532...65,634,681 JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24681597)
Ensembl
RGD
PMID:24681597 GO_REF:0000107 NCBI chr19:73,602,277...73,650,271 JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:12140558), (PMID:21970971) RGD PMID:12140558 PMID:21970971 NCBI chr19:11,603,129...12,048,930 JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO MGI:2387934 (PMID:18622425) RGD PMID:18622425 NCBI chr20:12,730,846...12,739,629 JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (PMID:16436605) RGD PMID:16436605 NCBI chr10:48,294,932...48,324,941 JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3623521 (PMID:21970971)
Ensembl
RGD
PMID:21970971 GO_REF:0000107 NCBI chr 5:129,634,274...129,644,150 JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 acts_upstream_of_or_within ISO MGI:5302103 (PMID:21970971) RGD PMID:21970971 NCBI chr 6:106,755,462...106,794,849 JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
MGI:5645931 (PMID:33144400)
Ensembl
RGD
PMID:33144400 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027 JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:24895407), (PMID:28424209) RGD PMID:24895407 PMID:28424209 NCBI chr 6:46,580,749...46,658,345 JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO MGI:3608888 (PMID:21069829) RGD PMID:21069829 NCBI chr 1:205,364,796...205,371,102 JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:84,558,159...84,580,616 JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:2183192 (PMID:16186342) RGD PMID:16186342 NCBI chr17:24,230,064...24,253,219 JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G involved_in ISO
IEA
ISS
(PMID:32995850)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32995850 GO_REF:0000024 GO_REF:0000107 NCBI chr15:33,901,230...33,907,596 JBrowse link
cell envelope organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrnr hornerin involved_in ISO (PMID:21282207) RGD PMID:21282207
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856465 (PMID:3070812)
Ensembl
RGD
PMID:3070812 GO_REF:0000107 NCBI chr 1:142,390,951...142,453,779 JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346|MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 2:60,032,873...60,327,629 JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 acts_upstream_of_or_within ISO (PMID:11741898) RGD PMID:11741898 NCBI chr20:29,143,029...29,219,846 JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in ISO (PMID:31844321) RGD PMID:31844321 NCBI chr18:52,346,448...52,531,245 JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 acts_upstream_of_or_within ISO MGI:2388161 (PMID:16556917) RGD PMID:16556917 NCBI chr10:34,920,992...35,126,465 JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:1347346|MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 8:90,704,727...90,744,333 JBrowse link
G Antxr2 ANTXR cell adhesion molecule 2 acts_upstream_of_or_within ISO MGI:1919164 (PMID:28604699) RGD PMID:28604699 NCBI chr14:11,541,718...11,682,110 JBrowse link
G Anxa2 annexin A2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3028929 (PMID:14702107)
Ensembl
RGD
PMID:14702107 GO_REF:0000107 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:1856101|MGI:1856102|MGI:3588774 (PMID:16338116), (PMID:20889), (PMID:4808708), (PMID:8096378), (PMID:8895222) RGD PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within TAS
ISO
MGI:1856399|MGI:88457 (PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283) RGD PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... RGD:1300046 NCBI chr 2:201,820,715...202,013,853 JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:9188673)
MGI:2154689 (PMID:10581026), (PMID:11668593)
GO_REF:0000033
RGD
GO_Central
PMID:9188673 PMID:10581026 PMID:11668593 GO_REF:0000033 NCBI chr20:4,786,932...4,816,598 JBrowse link
G Col14a1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO MGI:3846440 (PMID:22906538) RGD PMID:22906538 NCBI chr 7:88,611,827...88,826,939 JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391) RGD PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391 NCBI chr10:80,380,458...80,397,461 JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in ISO
IEA
(PMID:17211858), (PMID:18375391)
GO_REF:0000107
RGD
Ensembl
PMID:17211858 PMID:18375391 GO_REF:0000107 NCBI chr 4:33,518,557...33,553,484 JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:1429602)
MGI:1857275|MGI:2152978 (PMID:11171689), (PMID:3070812), (PMID:7276808), (PMID:7590256), (PMID:8989518), (PMID:9022054), (PMID:9832566), (PMID:9915573)
GO_REF:0000107
RGD
Ensembl
PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 More... GO_REF:0000107 NCBI chr 7:130,977,561...131,006,627 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within
ISO (PMID:7546986), (PMID:9036918)
MGI:1857431 (PMID:9050868)
MGI:1857431|MGI:1860700 (PMID:20587693), (PMID:24820199), (PMID:29551664), (PMID:31655293)
RGD PMID:7546986 PMID:9036918 PMID:9050868 PMID:20587693 PMID:24820199 More... NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
MGI:3664598|MGI:88446 (PMID:15383546), (PMID:16492673), (PMID:17029294), (PMID:21467034)
(PMID:11278977), (PMID:15095409), (PMID:9683580)
Ensembl
GO_Central
RGD
PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16492673 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715 JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:9425231)
(PMID:15199158)
RGD PMID:9425231 PMID:15199158 NCBI chr 9:54,940,768...55,090,151 JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356|MGI:88459 (PMID:25158062), (PMID:28604699) RGD PMID:25158062 PMID:28604699 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180787|MGI:5550566 (PMID:19808781), (PMID:24312420), (PMID:26746240)
Ensembl
RGD
PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 NCBI chr16:19,047,206...19,055,584 JBrowse link
G Crtap cartilage associated protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,926,117...122,945,843 JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23979599)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23979599 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:21,093,927...21,103,091 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (PMID:19900459) RGD PMID:19900459 NCBI chr13:84,726,412...84,851,032 JBrowse link
G Dpt dermatopontin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2387341 (PMID:12230512), (PMID:16877395)
GO_Central
RGD
PMID:12230512 PMID:16877395 GO_REF:0000033 NCBI chr13:77,123,224...77,151,646 JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO (PMID:28106121) RGD PMID:28106121 NCBI chr15:18,495,037...18,530,440 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:19850926) RGD PMID:19850926 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO MGI:5432211 (PMID:24777781), (PMID:28206698) RGD PMID:24777781 PMID:28206698 NCBI chr10:85,345,434...85,357,998 JBrowse link
G Fmod fibromodulin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:45,493,517...45,504,134 JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (PMID:10767326) RGD PMID:10767326 NCBI chr17:32,631,379...32,635,361 JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:10767326) RGD PMID:10767326 NCBI chr19:66,094,718...66,097,420 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:100,512,317...100,524,001 JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (PMID:10660670) RGD PMID:10660670 NCBI chr 3:16,862,195...16,940,899 JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IMP
(PMID:26700732)
GO_REF:0000033
RGD
GO_Central
PMID:26700732 PMID:16804742 PMID:16432278 GO_REF:0000033, RGD:1600668, RGD:1600669 NCBI chr18:45,964,544...45,977,431 JBrowse link
G Loxl1 lysyl oxidase-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,691,763...58,716,365 JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:21835952)
UniProt
GO_Central
Ensembl
RGD
PMID:21835952 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr15:44,683,449...44,773,067 JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:115,540,640...115,556,958 JBrowse link
G Loxl4 lysyl oxidase-like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:241,396,183...241,416,385 JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (PMID:21606205) RGD PMID:21606205 NCBI chr13:94,970,421...95,012,071 JBrowse link
G Mkx mohawk homeobox acts_upstream_of_or_within ISO MGI:5287572 (PMID:20696843) RGD PMID:20696843 NCBI chr17:55,077,073...55,156,877 JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO MGI:2387934 (PMID:18622425) RGD PMID:18622425 NCBI chr20:12,730,846...12,739,629 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1857444 (PMID:10383727)
GO_REF:0000107
HGNC-UCL
RGD
Ensembl
PMID:10383727 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Optc opticin involved_in IBA
ISO
GO_REF:0000033
(PMID:29323130)
GO_Central
RGD
PMID:29323130 GO_REF:0000033 NCBI chr13:45,353,954...45,368,254 JBrowse link
G P3h1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO MGI:4830452 (PMID:20363744) RGD PMID:20363744 NCBI chr 5:132,841,868...132,856,664 JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:27119146)
GO_REF:0000033
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:27119146 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:85,338,158...85,345,108 JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3706369 (PMID:17135260)
GO_REF:0000033
RGD
GO_Central
PMID:17135260 GO_REF:0000033 NCBI chr20:27,784,696...27,895,785 JBrowse link
G P4ha3 prolyl 4-hydroxylase subunit alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:154,628,723...154,663,779 JBrowse link
G Plod1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:163,623,847...163,650,737 JBrowse link
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:93,084,548...93,167,255 JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
MGI:3620600|MGI:3620603 (PMID:16467571)
Ensembl
GO_Central
RGD
PMID:16467571 GO_REF:0000033 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945 JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:22842973) RGD PMID:22842973 NCBI chr 6:46,580,749...46,658,345 JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (PMID:18802027) RGD PMID:18802027 NCBI chr 7:108,176,608...108,178,626 JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (PMID:28106121) RGD PMID:28106121 NCBI chr 5:146,748,638...146,764,656 JBrowse link
G Serpinf2 serpin family F member 2 involved_in ISO (PMID:17958745) RGD PMID:17958745 NCBI chr10:60,272,400...60,280,506 JBrowse link
G Serpinh1 serpin family H member 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
MGI:2176070|MGI:2385994|MGI:5505265 (PMID:10995453), (PMID:22492985)
GO_Central
Ensembl
RGD
PMID:10995453 PMID:22492985 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:153,643,500...153,650,853 JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3664776 (PMID:19079247) RGD PMID:19079247 NCBI chr 2:169,089,517...169,097,064 JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16891397)
AgBase
RGD
PMID:16891397 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388050 (PMID:15993878)
Ensembl
RGD
PMID:15993878 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371 JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:2181283|MGI:3053791 (PMID:11925569), (PMID:15194424) RGD PMID:11925569 PMID:15194424
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3699244|MGI:5816979 (PMID:27435297)
Ensembl
RGD
PMID:27435297 GO_REF:0000107 NCBI chr 6:106,888,284...106,913,139 JBrowse link
G Vps33b VPS33B, late endosome and lysosome associated acts_upstream_of_or_within ISO MGI:3699244|MGI:5770088 (PMID:27435297) RGD PMID:27435297 NCBI chr 1:143,633,167...143,656,228 JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within ISO MGI:6765940 (PMID:34368841) RGD PMID:34368841 NCBI chr19:50,282,337...50,324,010 JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097|MGI:3588774 (PMID:16338116), (PMID:20889), (PMID:3385878), (PMID:937819) RGD PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1860700 (PMID:24820199) RGD PMID:24820199 NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18973305), (PMID:27339457)
(PMID:16478991), (PMID:20019329), (PMID:26178373), (PMID:26711913), (PMID:28508064)
MGI:4410301 (PMID:19855011)
RGD PMID:16478991 PMID:18973305 PMID:19855011 PMID:20019329 PMID:26178373 More... NCBI chr 1:202,781,692...202,789,784 JBrowse link
G Eln elastin TAS RGD PMID:10090127 RGD:731206 NCBI chr12:27,604,983...27,648,413 JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:25056700) RGD PMID:25056700 NCBI chr 6:25,455,974...25,463,713 JBrowse link
G Fbln5 fibulin 5 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:11805834), (PMID:11805835)
GO_REF:0000033
GO_REF:0000107
(PMID:17035250)
UniProt
RGD
GO_Central
Ensembl
PMID:11805834 PMID:11805835 PMID:17035250 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:120,899,219...120,977,829 JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within IMP
ISO
MGI:3610732 (PMID:12417550), (PMID:16192629), (PMID:23413430) RGD PMID:12417550 PMID:16192629 PMID:23413430 PMID:16432278 RGD:1600669 NCBI chr18:45,964,544...45,977,431 JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 involved_in ISO (PMID:25713297) RGD PMID:25713297 NCBI chr 1:82,600,136...82,634,346 JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO
IBA
(PMID:22355679)
GO_REF:0000033
RGD
GO_Central
PMID:22355679 GO_REF:0000033 NCBI chr10:46,666,552...46,669,613 JBrowse link
G Myh11 myosin heavy chain 11 involved_in ISO
IEA
(PMID:16444274)
GO_REF:0000107
RGD
Ensembl
PMID:16444274 GO_REF:0000107 NCBI chr10:1,250,554...1,345,681 JBrowse link
G Thsd4 thrombospondin type 1 domain containing 4 acts_upstream_of_or_within ISO (PMID:19940141) RGD PMID:19940141 NCBI chr 8:60,384,636...60,984,419 JBrowse link
G Tnxb tenascin XB involved_in ISO (PMID:15102077) RGD PMID:15102077
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856327 (PMID:22910579)
Ensembl
RGD
PMID:22910579 GO_REF:0000107 NCBI chr 4:33,518,557...33,553,484 JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:19114551) RGD PMID:19114551 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Eln elastin involved_in IEA
ISO
GO_REF:0000107
(PMID:20576933)
Ensembl
RGD
PMID:20576933 GO_REF:0000107 NCBI chr12:27,604,983...27,648,413 JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO (PMID:28774593) RGD PMID:28774593 NCBI chr10:85,345,434...85,357,998 JBrowse link
G Gas6 growth arrest specific 6 involved_in IEP PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr16:82,747,676...82,778,090 JBrowse link
G Gpm6b glycoprotein m6b involved_in ISO
ISS
(PMID:21638316)
GO_REF:0000024
RGD
UniProt
PMID:21638316 GO_REF:0000024 NCBI chr  X:28,057,788...28,204,409 JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4437572 (PMID:20181608)
Ensembl
RGD
PMID:20181608 GO_REF:0000107 NCBI chr 2:173,488,909...173,496,824 JBrowse link
G Has1 hyaluronan synthase 1 involved_in IBA
ISO
GO_REF:0000033
(PMID:10455188)
GO_Central
RGD
PMID:10455188 GO_REF:0000033 NCBI chr 1:58,693,411...58,705,653 JBrowse link
G Has2 hyaluronan synthase 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:10455188)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:10455188 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:90,002,929...90,028,933 JBrowse link
G Has3 hyaluronan synthase 3 involved_in IBA
ISO
GO_REF:0000033
(PMID:10455188)
GO_Central
RGD
PMID:10455188 GO_REF:0000033 NCBI chr19:34,768,421...34,782,170 JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
MGI:4356107 (PMID:19706528)
Ensembl
RGD
PMID:19706528 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027 JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:23867277) RGD PMID:23867277 NCBI chr13:67,949,780...67,987,434 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (PMID:22910579)
Ensembl
RGD
PMID:22910579 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO MGI:2176205|MGI:2385468 (PMID:20881014) RGD PMID:20881014 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19734317)
UniProt
RGD
PMID:19734317 GO_REF:0000024 NCBI chr 1:90,324,312...90,340,627 JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 IMP positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr 1:22,621,498...22,624,614 JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19767743)
UniProt
RGD
PMID:19767743 GO_REF:0000024 NCBI chr 3:98,408,240...98,449,104 JBrowse link
G Eng endoglin IMP RGD PMID:15539634 RGD:1601032 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:27188440) RGD PMID:27188440 NCBI chr 5:68,460,304...68,496,026 JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within ISO MGI:6765940 (PMID:34368841) RGD PMID:34368841 NCBI chr19:50,282,337...50,324,010 JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in ISO (PMID:23233679) RGD PMID:23233679 NCBI chr 8:29,307,864...29,331,249 JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO (PMID:23233679) RGD PMID:23233679 NCBI chr11:25,000,627...25,047,205 JBrowse link
G Capg capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 4:106,152,912...106,170,010 JBrowse link
G Cma1 chymase 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr15:33,387,351...33,390,133 JBrowse link
G Eng endoglin involved_in ISO (PMID:18223685) RGD PMID:18223685 NCBI chr 3:36,332,190...36,370,324 JBrowse link
G Exoc8 exocyst complex component 8 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr19:69,752,387...69,754,876 JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr20:2,922,662...2,932,906 JBrowse link
G Gsn gelsolin NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 3:38,982,605...39,035,849 JBrowse link
G Kif9 kinesin family member 9 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr 8:110,459,467...110,504,492 JBrowse link
G Klk4 kallikrein-related peptidase 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4355346 (PMID:22243248)
GO_Central
RGD
PMID:22243248 GO_REF:0000033 NCBI chr 1:94,344,195...94,349,425 JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,296,574...94,304,768 JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO (PMID:15159456) RGD PMID:15159456 NCBI chr13:67,924,872...68,051,986 JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr15:56,846,375...56,954,090 JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of ISO (PMID:23820254) RGD PMID:23820254 NCBI chr15:92,181,336...92,181,413 JBrowse link
G Mir92a2 microRNA 92a-2 acts_upstream_of ISO (PMID:23820254) RGD PMID:23820254 NCBI chr  X:132,421,942...132,422,033 JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:17987127)
(PMID:8576151), (PMID:9065415)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8576151 PMID:9065415 PMID:17987127 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:4,497,960...4,508,239 JBrowse link
G Mmp20 matrix metallopeptidase 20 acts_upstream_of_or_within ISO MGI:2447874 (PMID:22243248) RGD PMID:22243248 NCBI chr 8:4,789,415...4,830,035 JBrowse link
G Noxo1 NADPH oxidase organizer 1 involved_in ISO (PMID:19755710) RGD PMID:19755710 NCBI chr10:13,723,253...13,726,008 JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665440|MGI:6363079 (PMID:30659184)
Ensembl
RGD
PMID:30659184 GO_REF:0000107 NCBI chr 2:177,154,056...177,167,810 JBrowse link
G Plg plasminogen involved_in ISO (PMID:14699093) RGD PMID:14699093 NCBI chr 1:48,325,186...48,367,643 JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (PMID:19755710) RGD PMID:19755710 NCBI chr10:17,422,906...17,538,977 JBrowse link
G Tpsab1 tryptase alpha/beta 1 involved_in ISO (PMID:27068509) RGD PMID:27068509 NCBI chr10:14,864,887...14,867,302 JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:24344185) RGD PMID:24344185 NCBI chr 9:105,722,779...105,830,836 JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO MGI:5913851 (PMID:26247047) RGD PMID:26247047 NCBI chr 8:83,718,897...83,902,128 JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr11:43,912,187...44,128,888 JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr11:38,418,565...38,427,384 JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:15,033,859...15,063,800 JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:60,032,873...60,327,629 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:10,299,264...10,338,464 JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:29,143,029...29,219,846 JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:29,307,864...29,331,249 JBrowse link
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:32,430,436...32,562,481 JBrowse link
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:120,445,800...120,768,204 JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:41,686,951...41,840,035 JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:52,346,448...52,531,245 JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:34,920,992...35,126,465 JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif, 20 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:18454205)
GO_REF:0000033
RGD
GO_Central
PMID:18454205 GO_REF:0000033 NCBI chr 7:125,396,227...125,528,020 JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:18,231,128...18,437,771 JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr13:86,203,011...86,212,500 JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:25,000,627...25,047,205 JBrowse link
G Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:35,421,483...35,633,305 JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 8:90,704,727...90,744,333 JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:29,349,078...29,368,413 JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 involved_in ISO
IBA
(PMID:20096780)
GO_REF:0000033
RGD
GO_Central
PMID:20096780 GO_REF:0000033 NCBI chr 4:125,290,633...125,462,988 JBrowse link
G Adamtsl1 ADAMTS-like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:99,964,406...100,919,786 JBrowse link
G Adamtsl2 ADAMTS-like 2 acts_upstream_of_or_within ISO (PMID:25762570) RGD PMID:25762570 NCBI chr 3:10,397,774...10,434,557 JBrowse link
G Adamtsl3 ADAMTS-like 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:136,288,793...136,596,986 JBrowse link
G Adamtsl4 ADAMTS-like 4 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 2:183,235,634...183,247,091 JBrowse link
G Adamtsl5 ADAMTS-like 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:9,362,623...9,371,248 JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (PMID:9734405) RGD PMID:9734405 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO MGI:108405 (PMID:16407979) RGD PMID:16407979 NCBI chr 1:159,896,889...159,920,505 JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within ISO MGI:107765 (PMID:16407979) RGD PMID:16407979 NCBI chr14:41,849,638...42,232,930 JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within ISO MGI:88047|MGI:88059 (PMID:15385965) RGD PMID:15385965 NCBI chr 1:85,696,880...85,707,215 JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88046|MGI:88059 (PMID:15385965) RGD PMID:15385965 NCBI chr 8:29,599,230...29,662,311 JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:88046|MGI:88047 (PMID:15385965)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15385965 GO_REF:0000024 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856097 (PMID:1115218) RGD PMID:1115218 NCBI chr  X:75,159,635...75,267,094 JBrowse link
G Atxn1l ataxin 1 like acts_upstream_of_or_within ISO MGI:5301616 (PMID:22014525) RGD PMID:22014525 NCBI chr19:37,700,341...37,711,529 JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178779 (PMID:11900463)
Ensembl
RGD
PMID:11900463 GO_REF:0000107 NCBI chr 5:55,935,614...55,982,461 JBrowse link
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:2158443 (PMID:10586052) RGD PMID:10586052 NCBI chr 1:79,471,368...79,485,908 JBrowse link
G C20h6orf15 similar to human chromosome 6 open reading frame 15 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:18757743)
GO_REF:0000033
RGD
GO_Central
PMID:18757743 GO_REF:0000033 NCBI chr20:3,172,330...3,173,886 JBrowse link
G Ccdc80 coiled-coil domain containing 80 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr11:55,685,165...55,718,827 JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 2:234,562,410...234,565,370 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within ISO MGI:2179134 (PMID:15254016) RGD PMID:15254016 NCBI chr20:11,474,104...11,582,593 JBrowse link
G Col19a1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO MGI:3053870 (PMID:15302855) RGD PMID:15302855 NCBI chr 9:26,673,916...27,022,139 JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5315593 (PMID:22206015)
Ensembl
RGD
PMID:22206015 GO_REF:0000107 NCBI chr 5:76,647,302...76,765,989 JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431|MGI:1860700 (PMID:25330296), (PMID:31655293) RGD PMID:25330296 PMID:31655293 NCBI chr 9:54,866,646...54,902,578 JBrowse link
G Col4a6 collagen type IV alpha 6 chain acts_upstream_of_or_within ISO (PMID:10965041) RGD PMID:10965041 NCBI chr  X:109,554,945...109,905,987 JBrowse link
G Col6a4 collagen, type VI, alpha 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:106,617,169...106,733,493 JBrowse link
G Col6a5 collagen type VI alpha 5 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:106,483,806...106,584,114 JBrowse link
G Col6a6 collagen type VI alpha 6 chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:106,318,010...106,473,419 JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr19:48,053,153...48,111,485 JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO MGI:4947395 (PMID:21148564) RGD PMID:21148564 NCBI chr16:20,995,210...21,330,586 JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000002
(PMID:18757743)
GO_REF:0000033
GO_REF:0000107
InterPro
RGD
GO_Central
Ensembl
PMID:18757743 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr14:5,833,111...5,867,154 JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:21972064) RGD PMID:21972064 NCBI chr 4:5,452,683...5,556,679 JBrowse link
G Ecm2 extracellular matrix protein 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:18757743)
GO_REF:0000033
RGD
GO_Central
PMID:18757743 GO_REF:0000033 NCBI chr17:15,120,194...15,152,536 JBrowse link
G Egfl6 EGF-like-domain, multiple 6 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr  X:31,515,752...31,573,699 JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 NCBI chr 2:56,301,945...56,476,665 JBrowse link
G Elf3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2662485 (PMID:11984530)
Ensembl
RGD
PMID:11984530 GO_REF:0000107 NCBI chr13:49,242,265...49,247,102 JBrowse link
G Eln elastin acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr12:27,604,983...27,648,413 JBrowse link
G Emilin1 elastin microfibril interfacer 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 6:25,455,974...25,463,713 JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:9651581) RGD PMID:9651581 NCBI chr 1:88,161,342...88,175,102 JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO MGI:1859815|MGI:1914725 (PMID:22981861) RGD PMID:22981861 NCBI chr15:18,495,037...18,530,440 JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO MGI:1354385|MGI:1859815 (PMID:22981861) RGD PMID:22981861 NCBI chr17:92,913,696...92,987,401 JBrowse link
G Fbln1 fibulin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr 7:116,310,582...116,390,075 JBrowse link
G Fbln5 fibulin 5 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 6:120,899,219...120,977,829 JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO (PMID:31296900) RGD PMID:31296900 NCBI chr 1:77,479,641...77,486,954 JBrowse link
G Fn1 fibronectin 1 IMP RGD PMID:12388756 RGD:1358623 NCBI chr 9:80,645,507...80,714,200 JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (PMID:16439479) RGD PMID:16439479 NCBI chr19:49,153,949...49,157,741 JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO MGI:1347470|MGI:2667134 (PMID:16439479) RGD PMID:16439479 NCBI chr17:32,835,730...32,842,547 JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within ISO MGI:2183221 (PMID:11487638) RGD PMID:11487638 NCBI chr10:88,352,987...88,361,661 JBrowse link
G Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr19:33,599,689...33,647,060 JBrowse link
G Hpse2 heparanase 2 (inactive) acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:4308701 (PMID:25510506)
GO_REF:0000033
RGD
GO_Central
PMID:25510506 GO_REF:0000033 NCBI chr 1:241,582,904...242,284,348 JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 3:79,990,048...80,113,556 JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:154,960,818...155,061,971 JBrowse link
G Ibsp integrin-binding sialoprotein involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:18757743)
GO_REF:0000033
UniProt
Ensembl
RGD
GO_Central
PMID:18757743 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:5,439,825...5,452,570 JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO MGI:2176236 (PMID:25410057) RGD PMID:25410057 NCBI chr14:1,031,588...1,059,494 JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:6693683 (PMID:32265257)
Ensembl
RGD
PMID:32265257 GO_REF:0000107 NCBI chr 8:81,243,624...81,389,722 JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:6693686 (PMID:32265257)
Ensembl
RGD
PMID:32265257 GO_REF:0000107 NCBI chr11:44,318,836...44,418,382 JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO MGI:2181699 (PMID:10742111) RGD PMID:10742111 NCBI chr17:75,304,004...75,501,510 JBrowse link
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 acts_upstream_of_or_within ISO (PMID:17675295) RGD PMID:17675295 NCBI chr16:6,122,246...6,136,363 JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 1:243,939,596...243,943,060 JBrowse link
G Lgals3 galectin 3 acts_upstream_of_or_within ISO MGI:97011 (PMID:15800063) RGD PMID:15800063 NCBI chr15:20,620,083...20,632,019 JBrowse link
G Mansc4 MANSC domain containing 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:179,991,845...180,000,716 JBrowse link
G Matn3 matrilin 3 involved_in ISO (PMID:10660556) RGD PMID:10660556 NCBI chr 6:31,748,517...31,768,564 JBrowse link
G Mia MIA SH3 domain containing involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2159701 (PMID:11839810)
GO_Central
RGD
PMID:11839810 GO_REF:0000033 NCBI chr 1:82,473,677...82,476,378 JBrowse link
G Mmp10 matrix metallopeptidase 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,974,707...12,982,613 JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2387934 (PMID:18622425)
GO_REF:0000033
RGD
GO_Central
PMID:18622425 GO_REF:0000033 NCBI chr20:12,730,846...12,739,629 JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,581,785...4,591,687 JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,497,960...4,508,239 JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:27,887,795...27,897,020 JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:9,663,449...9,684,943 JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:31,312,280...31,556,276 JBrowse link
G Mmp17 matrix metallopeptidase 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,074,398...27,099,317 JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,598,326...4,606,965 JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:30,327,643...30,355,856 JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,789,415...4,830,035 JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:188,480,186...188,485,855 JBrowse link
G Mmp23 matrix metallopeptidase 23 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:171,521,905...171,525,007 JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,279,096...144,323,572 JBrowse link
G Mmp25 matrix metallopeptidase 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,164,974...13,180,503 JBrowse link
G Mmp27 matrix metallopeptidase 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,745,887...4,755,806 JBrowse link
G Mmp28 matrix metallopeptidase 28 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,241,138...68,264,866 JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,925,267...12,938,828 JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:13,133,043...13,140,761 JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:4,724,009...4,733,864 JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
MGI:1932294|MGI:96778 (PMID:15800063)
Ensembl
GO_Central
RGD
PMID:15800063 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:174,103,474...174,111,434 JBrowse link
G Mpzl3 myelin protein zero-like 3 acts_upstream_of_or_within ISO MGI:1857012 (PMID:15482472) RGD PMID:15482472 NCBI chr 8:54,257,235...54,277,422 JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973 (PMID:16554364) RGD PMID:16554364 NCBI chr 7:42,802,946...42,806,177 JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr 4:94,944,392...94,981,871 JBrowse link
G Nepn nephrocan involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:31,786,607...31,799,458 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857478 (PMID:16835260)
HGNC-UCL
RGD
PMID:16835260 GO_REF:0000024 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within ISO MGI:2179705 (PMID:10586052) RGD PMID:10586052 NCBI chr 1:255,106,010...255,114,649 JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr17:86,085,133...86,158,272 JBrowse link
G Nox1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3616995 (PMID:16386251)
Ensembl
RGD
PMID:16386251 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291 JBrowse link
G Nphp3 nephrocystin 3 acts_upstream_of_or_within ISO MGI:1856987 (PMID:7539536) RGD PMID:7539536 NCBI chr 8:113,500,708...113,541,179 JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 2:221,391,151...221,459,527 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176560 (PMID:16424942) RGD PMID:16424942 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Olfml2a olfactomedin-like 2A acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 3:22,688,590...22,717,917 JBrowse link
G Olfml2b olfactomedin-like 2B acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr13:82,869,414...82,906,607 JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:103,398,166...103,432,199 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (PMID:15543606)
Ensembl
RGD
PMID:15543606 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604 JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 acts_upstream_of_or_within ISO MGI:3497739 (PMID:15383666) RGD PMID:15383666 NCBI chr 3:15,520,717...15,538,579 JBrowse link
G Postn periostin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:16314533)
GO_Central
RGD
PMID:16314533 GO_REF:0000033 NCBI chr 2:140,677,774...140,709,304 JBrowse link
G Prdx4 peroxiredoxin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1354385|MGI:1914725 (PMID:22981861)
Ensembl
RGD
PMID:22981861 GO_REF:0000107 NCBI chr  X:43,876,374...43,893,815 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:2684666 (PMID:14642275) RGD PMID:14642275 NCBI chr 7:107,015,730...107,220,865 JBrowse link
G Ptx3 pentraxin 3 acts_upstream_of_or_within ISO (PMID:17675295) RGD PMID:17675295 NCBI chr 2:152,797,563...152,803,372 JBrowse link
G Pxdn peroxidasin involved_in ISO (PMID:19590037) RGD PMID:19590037 NCBI chr 6:46,580,749...46,658,345 JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3623517 (PMID:11747814)
GO_Central
RGD
PMID:11747814 GO_REF:0000033 NCBI chr 5:58,102,961...58,169,516 JBrowse link
G Rxfp1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3054831 (PMID:15256493)
Ensembl
RGD
PMID:15256493 GO_REF:0000107 NCBI chr 2:164,772,270...164,893,484 JBrowse link
G Serac1 serine active site containing 1 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 1:49,025,845...49,061,853 JBrowse link
G Serpinb5 serpin family B member 5 acts_upstream_of_or_within ISO MGI:3040188 (PMID:18593913) RGD PMID:18593913 NCBI chr13:23,500,203...23,520,401 JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of ISO
ISS
(PMID:29337306)
GO_REF:0000024
RGD
UniProt
PMID:29337306 GO_REF:0000024 NCBI chr 2:224,171,787...224,319,326 JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO MGI:2450311|MGI:3605892 (PMID:18267097) RGD PMID:18267097 NCBI chr 8:28,438,370...28,535,071 JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr 6:100,701,330...100,897,441 JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr 1:55,262,472...55,391,804 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2385468|MGI:2450311 (PMID:17350610), (PMID:24191021) RGD PMID:17350610 PMID:24191021 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3709554 (PMID:17174946)
GO_REF:0000033
RGD
GO_Central
PMID:17174946 GO_REF:0000033 NCBI chr 3:126,685,017...126,697,957 JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr20:28,037,334...28,064,272 JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (PMID:11784073), (PMID:15528466) RGD PMID:11784073 PMID:15528466 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Tgfbi transforming growth factor, beta induced involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr17:7,960,885...7,990,234 JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:15381731) RGD PMID:15381731 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 7:87,456,318...87,484,324 JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154583 (PMID:10341229), (PMID:11077416), (PMID:16870730)
Ensembl
RGD
PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 NCBI chr13:71,751,714...72,172,731 JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:3053791 (PMID:15242785) RGD PMID:15242785
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:2450311 (PMID:16537898) RGD PMID:16537898 NCBI chr 4:146,772,483...146,779,376 JBrowse link
G Vit vitrin involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18757743)
GO_Central
RGD
PMID:18757743 GO_REF:0000033 NCBI chr 6:22,198,095...22,317,758 JBrowse link
G Vtn vitronectin acts_upstream_of_or_within ISO (PMID:18757743) RGD PMID:18757743 NCBI chr10:63,394,732...63,397,812 JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 acts_upstream_of_or_within ISO MGI:3809230 (PMID:18757743), (PMID:19279005) RGD PMID:18757743 PMID:19279005 NCBI chr 5:171,659,694...171,664,880 JBrowse link
G Vwf von Willebrand factor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:160,042,900...160,177,757 JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:35181734) RGD PMID:35181734 NCBI chr 8:83,718,897...83,902,128 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (PMID:17943183) RGD PMID:17943183 NCBI chr10:44,533,734...44,577,919 JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO MGI:2653208 (PMID:23900597) RGD PMID:23900597 NCBI chr14:5,870,232...5,876,339 JBrowse link
G Pbxip1 PBX homeobox interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665440|MGI:6363079 (PMID:30659184)
Ensembl
RGD
PMID:30659184 GO_REF:0000107 NCBI chr 2:177,154,056...177,167,810 JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within ISO MGI:6765940 (PMID:34368841) RGD PMID:34368841 NCBI chr19:50,282,337...50,324,010 JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a3 collagen type IV alpha 3 chain involved_in ISO (PMID:12631063) RGD PMID:12631063 NCBI chr 9:83,875,849...84,004,955 JBrowse link
G Col4a4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17942953), (PMID:19675380)
MGI:1857960 (PMID:10534397)
GO_REF:0000033
RGD
GO_Central
PMID:10534397 PMID:17942953 PMID:19675380 GO_REF:0000033 NCBI chr 9:83,833,173...83,875,436 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:18480751) RGD PMID:18480751 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Mpv17 mitochondrial inner membrane protein MPV17 involved_in ISO (PMID:16041630) RGD PMID:16041630 NCBI chr 6:25,221,668...25,236,241 JBrowse link
G Myo1e myosin IE involved_in ISS
ISO
GO_REF:0000024
(PMID:19005011)
UniProt
RGD
PMID:19005011 GO_REF:0000024 NCBI chr 8:70,887,934...71,080,180 JBrowse link
G Nid1 nidogen 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2682959 (PMID:14566019)
Ensembl
RGD
PMID:14566019 GO_REF:0000107 NCBI chr17:86,085,133...86,158,272 JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:85,720,812...85,749,079 JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
IBA
GO_REF:0000107
UniProtKB:Q8CFG0 (PMID:21719793)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:21719793 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:6,362,894...6,526,174 JBrowse link
G Sulf2 sulfatase 2 involved_in IBA
ISO
GO_REF:0000033
UniProtKB:Q8K007 (PMID:21719793)
GO_Central
RGD
PMID:21719793 GO_REF:0000033 NCBI chr 3:154,822,079...154,904,566 JBrowse link
G Wt1 WT1 transcription factor involved_in ISO
IEA
ISS
(PMID:19205749)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19205749 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:112,019,721...112,068,454 JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2138070 (PMID:16886065), (PMID:7670489)
Ensembl
RGD
PMID:7670489 PMID:16886065 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552 JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chadl chondroadherin-like involved_in ISO (PMID:25451920) RGD PMID:25451920 NCBI chr 7:115,085,447...115,097,565 JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:25056700) RGD PMID:25056700 NCBI chr 6:25,455,974...25,463,713 JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 ANTXR cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5754386 (PMID:25572963)
Ensembl
RGD
PMID:25572963 GO_REF:0000107 NCBI chr 4:119,590,770...119,778,232 JBrowse link
G Mir145 microRNA 145 acts_upstream_of
involved_in
ISO UniProtKB:P01137 (PMID:25323858)
(PMID:25704091)
RGD PMID:25323858 PMID:25704091 NCBI chr18:57,369,983...57,370,070 JBrowse link
G Mir18a microRNA 18a involved_in ISO (PMID:28131417) RGD PMID:28131417 NCBI chr15:92,180,765...92,180,860 JBrowse link
G Mir19a microRNA 19a acts_upstream_of ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:92,180,912...92,180,993 JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:92,181,214...92,181,300 JBrowse link
G Mir19b2 microRNA 19b-2 acts_upstream_of ISO (PMID:27098600) RGD PMID:27098600 NCBI chr  X:132,422,072...132,422,167 JBrowse link
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:28095798) RGD PMID:28095798 NCBI chr17:1,813,427...1,813,523 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of ISO (PMID:26315535) RGD PMID:26315535 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Mir98 microRNA 98 acts_upstream_of ISO (PMID:28251559) RGD PMID:28251559 NCBI chr  X:20,981,235...20,981,342 JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:25704091) RGD PMID:25704091 NCBI chr 4:150,095,743...150,221,104 JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:30729664) RGD PMID:30729664 NCBI chr14:2,634,294...2,810,269 JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr17:22,907,758...22,993,834 JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:26491108) RGD PMID:26491108 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in ISO UniProtKB:P25119 (PMID:26491108) RGD PMID:26491108 NCBI chr 4:159,837,119...159,849,817 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO UniProtKB:P25118 (PMID:26491108) RGD PMID:26491108 NCBI chr 5:157,070,642...157,104,216 JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:136,336,923...136,340,796 JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16651416)
UniProt
RGD
PMID:16651416 GO_REF:0000024 NCBI chr 3:67,370,794...67,452,422 JBrowse link
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:16651416) RGD PMID:16651416 NCBI chr 3:47,138,823...47,207,671 JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:26587789) RGD PMID:26587789 NCBI chr  X:20,981,235...20,981,342 JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein, alpha involved_in ISO (PMID:10455171) RGD PMID:10455171 NCBI chr 3:47,138,823...47,207,671 JBrowse link
polarized secretion of basement membrane proteins in epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
MGI:5645931 (PMID:33144400)
Ensembl
RGD
PMID:33144400 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027 JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO UniProtKB:Q86SQ0|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr13:32,046,362...32,267,954 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:122,555,532...122,736,934 JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) RGD PMID:23940118 NCBI chr 8:117,769,517...117,834,347 JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 involved_in ISO
IEA
UniProtKB:Q7Z460|UniProtKB:Q86SQ0 (PMID:23940118)
GO_REF:0000107
RGD
Ensembl
PMID:23940118 GO_REF:0000107 NCBI chr 8:53,900,338...53,948,325 JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO UniProtKB:Q7Z460|UniProtKB:Q86UU1 (PMID:23940118) RGD PMID:23940118 NCBI chr11:68,321,738...68,540,724 JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 involved_in ISO (PMID:27402836) RGD PMID:27402836 NCBI chr16:18,319,796...18,332,106 JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (PMID:26178373), (PMID:26220971), (PMID:26711913) RGD PMID:26178373 PMID:26220971 PMID:26711913 NCBI chr 1:202,781,692...202,789,784 JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:29304157)
Ensembl
RGD
PMID:29304157 GO_REF:0000107 NCBI chr15:54,780,858...54,911,989 JBrowse link
G Tnxb tenascin XB involved_in ISO (PMID:17033827) RGD PMID:17033827
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:30729664)
Ensembl
RGD
PMID:30729664 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:25056700) RGD PMID:25056700 NCBI chr 6:25,455,974...25,463,713 JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 IMP RGD PMID:27488450 RGD:152995505 NCBI chr 5:163,846,678...163,859,851 JBrowse link
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:30729664) RGD PMID:30729664 NCBI chr17:1,813,427...1,813,523 JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:21307346) RGD PMID:21307346 NCBI chr15:54,662,483...54,675,320 JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of
ISO (PMID:21307346)
(PMID:30729664)
RGD PMID:21307346 PMID:30729664 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:26747772)
Ensembl
RGD
PMID:26747772 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2176205|MGI:2385468 (PMID:20881014) RGD PMID:20881014 NCBI chr10:98,305,744...98,311,250 JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of ISO (PMID:24279830) RGD PMID:24279830 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of
involved_in
ISO
IEA
(PMID:28251559)
GO_REF:0000107
RGD
Ensembl
PMID:28251559 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371 JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21419085 RGD:5129171 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16730346)
Ensembl
RGD
PMID:16730346 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:23369837 RGD:7243115 NCBI chr15:50,557,722...50,606,569 JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:70,474,978...70,486,062 JBrowse link
G Ier3ip1-ps1 immediate early response 3 interacting protein 1, pseudogene 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:132,342,131...132,342,625 JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19158077) RGD PMID:19158077 NCBI chr15:54,662,483...54,675,320 JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO (PMID:26466680), (PMID:26578515) RGD PMID:26466680 PMID:26578515 NCBI chr19:33,571,255...33,586,783 JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:32,046,362...32,267,954 JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:122,555,532...122,736,934 JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (PMID:11723120) RGD PMID:11723120 NCBI chr13:84,726,412...84,851,032 JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISO
IEA
ISS
(PMID:20137952)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20137952 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,710,601...16,723,734 JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:26587789) RGD PMID:26587789 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Meltf melanotransferrin involved_in ISO (PMID:16713448) RGD PMID:16713448 NCBI chr11:68,884,446...68,906,300 JBrowse link
G Pdpn podoplanin involved_in ISS
ISO
GO_REF:0000024
(PMID:25486435)
UniProt
RGD
PMID:25486435 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656 JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (PMID:21984612) RGD PMID:21984612 NCBI chr13:98,160,075...98,261,771 JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase IMP RGD PMID:19846571 RGD:8693597 NCBI chr 3:35,377,587...35,480,843 JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:24691542 RGD:11341715 NCBI chr 9:67,679,502...67,747,226 JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 IMP RGD PMID:29656108 RGD:150520032 NCBI chr 5:116,295,691...116,323,219 JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO (PMID:29304157) RGD PMID:29304157 NCBI chr15:54,780,858...54,911,989 JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp1 AE binding protein 1 involved_in ISO
IEA
ISS
(PMID:29606302)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:29606302 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,738,800...80,748,878 JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:20951202) RGD PMID:20951202 NCBI chr20:11,905,690...11,924,111 JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (PMID:26690653) RGD PMID:26690653 NCBI chr 1:202,781,692...202,789,784 JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO UniProtKB:P00797 (PMID:17416596) RGD PMID:17416596 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Has2 hyaluronan synthase 2 IMP RGD PMID:27094859 RGD:12910548 NCBI chr 7:90,002,929...90,028,933 JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:21311046) RGD PMID:21311046 NCBI chr 3:29,676,040...29,721,613 JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of ISO (PMID:31319059) RGD PMID:31319059 NCBI chr 5:137,285,408...137,305,047 JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:31932796) RGD PMID:31932796 NCBI chr 1:227,285,510...227,384,553 JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISO
IEA
ISS
(PMID:12065315)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12065315 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,047,269...3,069,277 JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IMP RGD PMID:16738537 RGD:2313717 NCBI chr 8:39,303,936...39,426,022 JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO
IEA
ISS
(PMID:20876804)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20876804 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,466,686...9,481,423 JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:20980600) RGD PMID:20980600 NCBI chr 3:35,377,587...35,480,843 JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:20980600) RGD PMID:20980600 NCBI chr13:71,223,902...71,319,770 JBrowse link
G Angptl7 angiopoietin like 7 involved_in ISO (PMID:21199193) RGD PMID:21199193 NCBI chr 5:164,215,223...164,220,408 JBrowse link
G Axin2 axin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:28069701)
Ensembl
RGD
PMID:28069701 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579 JBrowse link
G Itgb3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2175913 (PMID:22984613)
Ensembl
RGD
PMID:22984613 GO_REF:0000107 NCBI chr10:90,009,927...90,067,787 JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within ISO MGI:3703328 (PMID:16943282) RGD PMID:16943282 NCBI chr 7:56,415,053...56,499,047 JBrowse link
G Mir21 microRNA 21 acts_upstream_of ISO (PMID:18591254) RGD PMID:18591254 NCBI chr10:71,902,600...71,902,691 JBrowse link
G Prdm5 PR/SET domain 5 involved_in ISO (PMID:21664999) RGD PMID:21664999 NCBI chr 4:95,075,736...95,237,921 JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in ISO (PMID:18591254) RGD PMID:18591254 NCBI chr 5:58,102,961...58,169,516 JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:26376865) RGD PMID:26376865 NCBI chr 3:174,659,683...174,671,978 JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (PMID:24038871) RGD PMID:24038871 NCBI chr 3:140,638,984...140,644,766 JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:1888389 (PMID:21780244) RGD PMID:21780244 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Zfp469 zinc finger protein 469 involved_in ISO (PMID:21664999) RGD PMID:21664999 NCBI chr19:50,282,337...50,324,010 JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:17881493) RGD PMID:17881493 NCBI chr 9:76,504,315...76,510,532 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      cellular component organization or biogenesis 7187
        cellular component organization 6903
          external encapsulating structure organization 326
            S-layer organization 0
            capsule organization + 0
            cell envelope organization + 1
            cell wall organization + 0
            egg chorion assembly + 0
            exosporium assembly 0
            extracellular matrix organization + 325
            pollen wall assembly + 0
            slime layer organization + 0
paths to the root