ONTOLOGY REPORT - ANNOTATIONS
Term: cell fate commitment
Accession: GO:0045165
browse the term
Definition: The cellular developmental process by which a cell establishes the intrinsic character of a cell or tissue region irreversibly committing it to a particular fate.
Comment: Note that this term was 'cell fate determination' but the term name was changed to better match its existing definition and the child term 'cell fate determination; GO:0001709' was also created.
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Barhl2
BarH-like homeobox 2
acts_upstream_of_or_within
ISO
(PMID:14998930)
RGD
PMID:14998930
NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
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Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12421925)
Ensembl RGD
PMID:12421925
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
(PMID:12421925)
RGD
PMID:12421925
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Casp3
caspase 3
acts_upstream_of_or_within
ISO
MGI:2178778 (PMID:15068794)
RGD
PMID:15068794
NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648
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Erbb4
erb-b2 receptor tyrosine kinase 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12399441)
Ensembl RGD
PMID:12399441
GO_REF:0000107
NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:20022960)
RGD
PMID:20022960
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:1857803|MGI:2150426 (PMID:15817220), (PMID:16018995)
RGD
PMID:15817220 PMID:16018995
NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:1345138 (PMID:15809037)
RGD
PMID:15809037
NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359
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Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660 (PMID:15509736), (PMID:16989802)
RGD
PMID:15509736 PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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Gap43
growth associated protein 43
acts_upstream_of_or_within
ISO
(PMID:15234344)
RGD
PMID:15234344
NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
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Gas1
growth arrest-specific 1
acts_upstream_of_or_within
ISO
MGI:2388397|MGI:3711070|MGI:98297 (PMID:11456441), (PMID:17504941)
RGD
PMID:11456441 PMID:17504941
NCBI chr17:4,482,168...4,485,153
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Gata1
GATA binding protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
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Gata2
GATA binding protein 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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Gata4
GATA binding protein 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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Gata6
GATA binding protein 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
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Gdf7
growth differentiation factor 7
acts_upstream_of_or_within
ISO
(PMID:15883363)
RGD
PMID:15883363
NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447
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Gfi1
growth factor independent 1 transcriptional repressor
acts_upstream_of_or_within
ISO
MGI:2449921 (PMID:16230531)
RGD
PMID:16230531
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
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Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2149672 (PMID:10952889)
RGD
PMID:10952889
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
(PMID:19154718)
RGD
PMID:19154718
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Hoxa2
homeobox A2
acts_upstream_of_or_within
ISO
MGI:1857530|MGI:1857626 (PMID:7903600), (PMID:7903601)
RGD
PMID:7903600 PMID:7903601
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
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Kdm6b
lysine demethylase 6B
acts_upstream_of_or_within
ISO
(PMID:18716661)
RGD
PMID:18716661
NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
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Kdr
kinase insert domain receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12569129)
Ensembl RGD
PMID:12569129
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Mef2c
myocyte enhancer factor 2C
acts_upstream_of_or_within
ISO
MGI:3603182 (PMID:19169261)
RGD
PMID:19169261
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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Mitf
melanocyte inducing transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856085 (PMID:15576400)
Ensembl RGD
PMID:15576400
GO_REF:0000107
NCBI chr 4:130,409,020...130,621,145
Ensembl chr 4:130,409,217...130,621,145
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Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:108055 (PMID:11861467)
RGD
PMID:11861467
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Neurod4
neuronal differentiation 4
acts_upstream_of_or_within
ISO
MGI:1339708 (PMID:11032813)
RGD
PMID:11032813
NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030
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Neurog1
neurogenin 1
acts_upstream_of_or_within
ISO
MGI:109619 (PMID:15229646)
RGD
PMID:15229646
NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
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Neurog2
neurogenin 2
acts_upstream_of_or_within
ISO
MGI:107754 (PMID:15229646)
RGD
PMID:15229646
NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
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Nkx6-2
NK6 homeobox 2
acts_upstream_of
ISO
MGI:2651850 (PMID:11567614)
RGD
PMID:11567614
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
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Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
MGI:2668418 (PMID:12842913)
RGD
PMID:12842913
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:97490 (PMID:15229646)
RGD
PMID:15229646
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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Onecut1
one cut homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1891408 (PMID:16103213)
Ensembl RGD
PMID:16103213
GO_REF:0000107
NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
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Onecut2
one cut homeobox 2
acts_upstream_of_or_within
ISO
MGI:1196423 (PMID:16103213)
RGD
PMID:16103213
NCBI chr18:57,831,647...57,890,884
Ensembl chr18:57,832,111...57,879,629
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Otx2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
MGI:2661065 (PMID:15105370)
RGD
PMID:15105370
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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Pax6
paired box 6
acts_upstream_of_or_within
ISO
MGI:1100526|MGI:1856155 (PMID:15229646), (PMID:15878992)
RGD
PMID:15229646 PMID:15878992
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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Pml
PML nuclear body scaffold
acts_upstream_of_or_within
ISO
MGI:2429949 (PMID:19261859)
RGD
PMID:19261859
NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
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Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1933381 (PMID:9814708)
RGD
PMID:9814708
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
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Pparg
peroxisome proliferator-activated receptor gamma
acts_upstream_of_or_within
ISO
MGI:102784|MGI:2651605 (PMID:15687259), (PMID:24703703)
RGD
PMID:15687259 PMID:24703703
NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468
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Prdm1
PR/SET domain 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3586884|MGI:3605483 (PMID:15750184), (PMID:15937476)
GO_Central RGD
PMID:15750184 PMID:15937476
GO_REF:0000033
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
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Ptf1a
pancreas associated transcription factor 1a
acts_upstream_of_or_within
ISO
MGI:2387804|MGI:3771319 (PMID:12185368), (PMID:17938243)
RGD
PMID:12185368 PMID:17938243
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:17015435)
RGD
PMID:17015435
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Ror2
receptor tyrosine kinase-like orphan receptor 2
acts_upstream_of_or_within
ISO
MGI:3793279 (PMID:20660756)
RGD
PMID:20660756
NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
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Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:95655 (PMID:17504941)
RGD
PMID:17504941
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Smad2
SMAD family member 2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2668416 (PMID:12842913)
UniProt RGD
PMID:12842913
GO_REF:0000024
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
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Sostdc1
sclerostin domain containing 1
acts_upstream_of
ISO
MGI:3604658 (PMID:22509524)
RGD
PMID:22509524
NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
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Sox13
SRY-box transcription factor 13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
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Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:18374910)
RGD
PMID:18374910
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
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Sox5
SRY-box transcription factor 5
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:98368 (PMID:15634692)
GO_Central RGD
PMID:15634692
GO_REF:0000033
NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
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Sox6
SRY-box transcription factor 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:98367 (PMID:15634692)
GO_Central RGD
PMID:15634692
GO_REF:0000033
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
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Sox8
SRY-box transcription factor 8
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:98371 (PMID:15893981)
UniProt RGD
PMID:15893981
GO_REF:0000024
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:98370 (PMID:15893981)
RGD
PMID:15893981
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of
ISO
MGI:4398888 (PMID:19759516)
RGD
PMID:19759516
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
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Spry2
sprouty RTK signaling antagonist 2
acts_upstream_of_or_within
ISO
MGI:3578633|MGI:99604 (PMID:15809037)
RGD
PMID:15809037
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
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Tal1
TAL bHLH transcription factor 1, erythroid differentiation factor
acts_upstream_of_or_within
ISO
(PMID:12569129)
RGD
PMID:12569129
NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
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Tbx19
T-box transcription factor 19
acts_upstream_of_or_within
ISO
MGI:2655153 (PMID:12651892)
RGD
PMID:12651892
NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
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Tead4
TEA domain transcription factor 4
acts_upstream_of_or_within
ISO
(PMID:22529382)
RGD
PMID:22529382
NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
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Tgfb1i1
transforming growth factor beta 1 induced transcript 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97747 (PMID:15687259)
Ensembl RGD
PMID:15687259
GO_REF:0000107
NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
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Tlx1
T-cell leukemia, homeobox 1
acts_upstream_of_or_within
ISO
MGI:3581680 (PMID:11356032)
RGD
PMID:11356032
NCBI chr 1:244,005,057...244,011,318
Ensembl chr 1:244,005,057...244,011,318
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Vsx2
visual system homeobox 2
acts_upstream_of_or_within
ISO
MGI:1856112 (PMID:15576400)
RGD
PMID:15576400
NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018
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Wnt1
Wnt family member 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
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Wnt10a
Wnt family member 10A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:76,349,931...76,362,400
Ensembl chr 9:76,349,931...76,362,400
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Wnt10b
Wnt family member 10B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
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Wnt11
Wnt family member 11
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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Wnt16
Wnt family member 16
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:50,820,968...50,831,380
Ensembl chr 4:50,820,968...50,831,380
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Wnt2b
Wnt family member 2B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
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Wnt3
Wnt family member 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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Wnt4
Wnt family member 4
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:1857453 (PMID:18351662)
GO_Central Ensembl RGD
PMID:18351662
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
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Wnt5a
Wnt family member 5A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Wnt5b
Wnt family member 5B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:152,609,566...152,733,790
Ensembl chr 4:152,609,569...152,733,407
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Wnt6
Wnt family member 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
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Wnt7a
Wnt family member 7A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
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Wnt8a
Wnt family member 8A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283
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Wnt8b
Wnt family member 8B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:243,354,145...243,376,000
Ensembl chr 1:243,354,086...243,374,286
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Wnt9a
Wnt family member 9A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133
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Wnt9b
Wnt family member 9B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
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Zfp683
zinc finger protein 683
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
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Rhoa
ras homolog family member A
involved_in
ISO
(PMID:25398325)
RGD
PMID:25398325
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(PMID:15466160)
RGD
PMID:15466160
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Gcm1
glial cells missing transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:14573516)
RGD
PMID:14573516
NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924
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Sox8
SRY-box transcription factor 8
acts_upstream_of_or_within
ISO
MGI:98371 (PMID:19490914)
RGD
PMID:19490914
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:98370 (PMID:19490914)
RGD
PMID:19490914
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Tal1
TAL bHLH transcription factor 1, erythroid differentiation factor
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:2661471 (PMID:16292311)
RGD
PMID:16292311
NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
G
Arhgef2
Rho/Rac guanine nucleotide exchange factor 2
involved_in
ISO IEA ISS
(PMID:28453519) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:28453519
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
G
Sox5
SRY-box transcription factor 5
involved_in
ISO
UniProtKB:Q23045 (PMID:23946438)
RGD
PMID:23946438
NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
G
Tead3
TEA domain transcription factor 3
involved_in
ISO
UniProtKB:Q19849 (PMID:23946438)
RGD
PMID:23946438
NCBI chr20:6,392,053...6,411,446
Ensembl chr20:6,392,053...6,411,446
G
Wnt7a
Wnt family member 7A
acts_upstream_of_or_within
ISO
(PMID:19497282)
RGD
PMID:19497282
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
G
Nkx2-5
NK2 homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3042511 (PMID:15109497)
Ensembl RGD
PMID:15109497
GO_REF:0000107
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
G
Tbx5
T-box transcription factor 5
involved_in
IEA ISO
GO_REF:0000107 (PMID:15289437)
Ensembl RGD
PMID:15289437
GO_REF:0000107
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
G
Dll1
delta like canonical Notch ligand 1
involved_in
NAS
PMID:10878608
UniProt
PMID:10878608
RGD:8553270
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Jag2
jagged canonical Notch ligand 2
involved_in
ISS ISO IEA
PMID:10080181 (PMID:10080181) GO_REF:0000107
RGD Ensembl
PMID:10080181 PMID:10080181
GO_REF:0000107, RGD:8553713
NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:3044585|MGI:3046196 (PMID:19154718)
RGD
PMID:19154718
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3046196|MGI:3583755 (PMID:19154718)
RGD
PMID:19154718
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:16407553)
RGD
PMID:16407553
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2155983 (PMID:10364557)
RGD
PMID:10364557
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
(PMID:14511481)
RGD
PMID:14511481
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2156165 (PMID:8788039)
Ensembl RGD
PMID:8788039
GO_REF:0000107
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
acts_upstream_of_or_within
ISO
MGI:1857113 (PMID:8788039)
RGD
PMID:8788039
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
G
Rag2
recombination activating 2
acts_upstream_of_or_within
ISO
MGI:1858556 (PMID:8788039)
RGD
PMID:8788039
NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
G
Tcf3
transcription factor 3
involved_in
ISO ISS
(PMID:15030778) GO_REF:0000024
RGD UniProt
PMID:15030778
GO_REF:0000024
NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857590 (PMID:8788039)
Ensembl RGD
PMID:8788039
GO_REF:0000107
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Slamf8
SLAM family member 8
involved_in
ISO
(PMID:11313408)
RGD
PMID:11313408
NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
UniProtKB:P52800 (PMID:15466160)
RGD
PMID:15466160
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:1934258 (PMID:18582859)
RGD
PMID:18582859
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:19571884) (PMID:19620969) GO_REF:0000107
RGD Ensembl
PMID:19571884 PMID:19620969
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18593560)
RGD
PMID:18593560
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Pou5f1
POU class 5 homeobox 1
involved_in
ISO
(PMID:19736317)
RGD
PMID:19736317
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Sox17
SRY-box transcription factor 17
involved_in
ISO
(PMID:19736317)
RGD
PMID:19736317
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Itgb1
integrin subunit beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154539 (PMID:9004034)
Ensembl RGD
PMID:9004034
GO_REF:0000107
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
G
Tenm4
teneurin transmembrane protein 4
acts_upstream_of_or_within
ISO
MGI:3655239 (PMID:17350578)
RGD
PMID:17350578
NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107
RGD Ensembl
PMID:19506109
GO_REF:0000107
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3710254 (PMID:18467625)
RGD
PMID:18467625
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
G
Wnt3a
Wnt family member 3A
involved_in acts_upstream_of_or_within
ISO
(PMID:20559569) MGI:2143322 (PMID:21554246)
RGD
PMID:20559569 PMID:21554246
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wt1
WT1 transcription factor
involved_in
ISO
(PMID:21654746)
RGD
PMID:21654746
NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1857579 (PMID:18228248)
RGD
PMID:18228248
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Cyld
CYLD lysine 63 deubiquitinase
acts_upstream_of_or_within
ISO
MGI:3664438 (PMID:16501569)
RGD
PMID:16501569
NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:17227833) GO_REF:0000107
UniProt RGD Ensembl
PMID:17227833
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Ctsl
cathepsin L
involved_in
ISS ISO
GO_REF:0000024 (PMID:9545226)
UniProt RGD
PMID:9545226
GO_REF:0000024
NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2156165 (PMID:8170972)
Ensembl RGD
PMID:8170972
GO_REF:0000107
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:11850626), (PMID:15078895)
RGD
PMID:11850626 PMID:15078895
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Pou5f1
POU class 5 homeobox 1
involved_in
ISO
(PMID:19736317)
RGD
PMID:19736317
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Atf3
activating transcription factor 3
TAS
RGD
PMID:15990869
RGD:1578388
NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
G
Barhl2
BarH-like homeobox 2
acts_upstream_of_or_within
ISO
(PMID:12657654)
RGD
PMID:12657654
NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
G
Chrdl1
chordin-like 1
IMP
RGD
PMID:14684875
RGD:1299653
NCBI chr X:106,889,125...106,992,937
Ensembl chr X:106,889,125...106,992,921
G
Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:3039046 (PMID:16574820)
RGD
PMID:16574820
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
G
Dll1
delta like canonical Notch ligand 1
TAS
RGD
PMID:14743446
RGD:1304491
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Dll3
delta like canonical Notch ligand 3
TAS
RGD
PMID:14743446
RGD:1304491
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
G
Ebf2
EBF transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:23499423)
RGD
PMID:23499423
NCBI chr15:41,435,509...41,634,403
Ensembl chr15:41,435,509...41,634,403
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:10367888)
RGD
PMID:10367888
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
(PMID:12923059)
RGD
PMID:12923059
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:11425898)
Ensembl RGD
PMID:11425898
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hoxa2
homeobox A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2385711 (PMID:16221728)
Ensembl RGD
PMID:16221728
GO_REF:0000107
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
G
Jag1
jagged canonical Notch ligand 1
involved_in
NAS
PMID:9268641 PMID:9207788
UniProt
PMID:9268641 PMID:9207788
RGD:8553717 , RGD:8553672
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Jag2
jagged canonical Notch ligand 2
involved_in
NAS
PMID:8948600
UniProt
PMID:8948600
RGD:69864
NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818
G
Nkx6-3
NK6 homeobox 3
acts_upstream_of_or_within
ISO
MGI:3795186 (PMID:18347062)
RGD
PMID:18347062
NCBI chr16:68,868,404...68,873,617
Ensembl chr16:68,868,404...68,873,617
G
Pax2
paired box 2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857673 (PMID:12756174)
UniProt RGD
PMID:12756174
GO_REF:0000024
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934347 (PMID:12756174)
Ensembl RGD
PMID:12756174
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Ptch1
patched 1
acts_upstream_of_or_within
ISO
MGI:1095405 (PMID:24492243)
RGD
PMID:24492243
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
G
Ptch2
patched 2
acts_upstream_of_or_within
ISO
MGI:105373 (PMID:24492243)
RGD
PMID:24492243
NCBI chr 5:130,571,956...130,592,506
Ensembl chr 5:130,572,312...130,592,405
G
Apc
APC regulator of WNT signaling pathway
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
G
Apc2
APC regulator of WNT signaling pathway 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:9,392,336...9,414,364
Ensembl chr 7:9,392,336...9,414,310
G
Cdon
cell adhesion associated, oncogene regulated
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:98297 (PMID:16647304)
Ensembl RGD
PMID:16647304
GO_REF:0000107
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148591|MGI:2148594|MGI:2450929 (PMID:15866163)
Ensembl RGD
PMID:15866163
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dhh
desert hedgehog signaling molecule
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:130,050,910...130,056,406
Ensembl chr 7:130,050,910...130,056,406
G
Fkbp8
FKBP prolyl isomerase 8
acts_upstream_of_or_within
ISO
MGI:3042750 (PMID:18590716)
RGD
PMID:18590716
NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
G
Foxa2
forkhead box A2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:18076286)
ParkinsonsUK-UCL RGD
PMID:18076286
GO_REF:0000024
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Gfi1
growth factor independent 1 transcriptional repressor
acts_upstream_of
ISO
MGI:2449921 (PMID:16230531)
RGD
PMID:16230531
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
G
Ihh
Indian hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1934258 (PMID:18582859)
GO_Central RGD
PMID:18582859
GO_REF:0000033
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Mga
MAX dimerization protein MGA
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:106,851,216...106,942,908
Ensembl chr 3:106,851,140...106,941,043
G
Nkx2-3
NK2 homeobox 3
acts_upstream_of_or_within
ISO
(PMID:38311164)
RGD
PMID:38311164
NCBI chr 1:242,478,130...242,481,083
Ensembl chr 1:242,478,130...242,481,083
G
Pou1f1
POU class 1 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:10367888)
RGD
PMID:10367888
NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801
G
Prdm14
PR/SET domain 14
acts_upstream_of_or_within
ISO
MGI:3805889 (PMID:18622394)
RGD
PMID:18622394
NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:109284 (PMID:15525534)
RGD
PMID:15525534
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Psen2
presenilin 2
acts_upstream_of_or_within
ISO
MGI:1202717 (PMID:15525534)
RGD
PMID:15525534
NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO IBA ISS
GO_REF:0000107 MGI:1857796|MGI:1926387 (PMID:12231626), (PMID:16647304), (PMID:18076286) GO_REF:0000033 GO_REF:0000024
Ensembl RGD GO_Central UniProt
PMID:12231626 PMID:16647304 PMID:18076286
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176255 (PMID:18590716)
Ensembl RGD
PMID:18590716
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:2449045 (PMID:12514105)
RGD
PMID:12514105
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Sox9
SRY-box transcription factor 9
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tbr1
T-box brain transcription factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
G
Tbx1
T-box transcription factor 1
involved_in
ISS IBA
GO_REF:0000024 GO_REF:0000033
UniProt GO_Central
GO_REF:0000024 GO_REF:0000033
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tbx10
T-box transcription factor 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:201,285,729...201,292,676
Ensembl chr 1:201,279,829...201,292,601
G
Tbx15
T-box transcription factor 15
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:186,576,650...186,687,748
Ensembl chr 2:186,576,676...186,687,663
G
Tbx18
T-box transcription factor 18
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
G
Tbx19
T-box transcription factor 19
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
G
Tbx2
T-box transcription factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
G
Tbx20
T-box transcription factor 20
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Tbx21
T-box transcription factor 21
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Tbx22
T-box transcription factor 22
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:72,723,619...72,774,647
Ensembl chr X:72,723,617...72,774,647
G
Tbx3
T-box transcription factor 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
G
Tbx4
T-box transcription factor 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:70,730,686...70,760,829
Ensembl chr10:70,731,163...70,760,825
G
Tbx5
T-box transcription factor 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
G
Tbx6
T-box transcription factor 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593
G
Tbxt
T-box transcription factor T
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864
G
Tead4
TEA domain transcription factor 4
acts_upstream_of_or_within
ISO
MGI:106907 (PMID:18083014)
RGD
PMID:18083014
NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
G
Dlx1
distal-less homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94902 (PMID:17678855)
Ensembl RGD
PMID:17678855
GO_REF:0000107
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94901 (PMID:17678855)
Ensembl RGD
PMID:17678855
GO_REF:0000107
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:22991444)
RGD
PMID:22991444
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
MGI:2679336 (PMID:23144223)
RGD
PMID:23144223
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867 (PMID:21338885)
RGD
PMID:21338885
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:4818492 (PMID:22991444)
RGD
PMID:22991444
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856158 (PMID:11124115)
Ensembl RGD
PMID:11124115
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Tbr1
T-box brain transcription factor 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2679336 (PMID:23144223)
GO_Central RGD
PMID:23144223
GO_REF:0000033
NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
G
Elf5
E74 like ETS transcription factor 5
acts_upstream_of_or_within
ISO
MGI:95456 (PMID:25446535)
RGD
PMID:25446535
NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973
G
Ets2
ETS proto-oncogene 2, transcription factor
acts_upstream_of_or_within
ISO
MGI:1335079 (PMID:25446535)
RGD
PMID:25446535
NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319
G
Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:10742100)
RGD
PMID:10742100
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107
RGD Ensembl
PMID:19506109
GO_REF:0000107
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Cdc73
cell division cycle 73
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:19345177) GO_REF:0000024
Ensembl RGD UniProt
PMID:19345177
GO_REF:0000024 GO_REF:0000107
NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1858007|MGI:2148567 (PMID:12194849)
Ensembl RGD
PMID:12194849
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
involved_in
ISO
(PMID:19345177)
RGD
PMID:19345177
NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
G
Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component
involved_in
ISS ISO
GO_REF:0000024 (PMID:19345177)
UniProt RGD
PMID:19345177
GO_REF:0000024
NCBI chr 8:76,199,547...76,223,983
Ensembl chr 8:76,199,099...76,223,983
G
Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
involved_in
ISS ISO
GO_REF:0000024 (PMID:19345177)
UniProt RGD
PMID:19345177
GO_REF:0000024
NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
G
Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:10742100)
RGD
PMID:10742100
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Rtf1
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
involved_in
ISO
(PMID:19345177)
RGD
PMID:19345177
NCBI chr 3:106,659,363...106,718,956
Ensembl chr 3:106,659,308...106,718,970
G
Gata6
GATA binding protein 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20308546)
Ensembl RGD
PMID:20308546
GO_REF:0000107
NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
(PMID:20308546)
RGD
PMID:20308546
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Eomes
eomesodermin
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3774028 (PMID:21245162)
GO_Central RGD
PMID:21245162
GO_REF:0000033
NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
G
Hnf1b
HNF1 homeobox B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857856 (PMID:18635606)
Ensembl RGD
PMID:18635606
GO_REF:0000107
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
G
Nanog
Nanog homeobox
acts_upstream_of_or_within
ISO
(PMID:20713518)
RGD
PMID:20713518
NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
G
Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:20713518)
RGD
PMID:20713518
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Sox17
SRY-box transcription factor 17
involved_in
ISO
(PMID:21305474)
RGD
PMID:21305474
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:21245162)
RGD
PMID:21245162
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Hoxa13
homeo box A13
acts_upstream_of_or_within
ISO
MGI:2152356 (PMID:18483557)
RGD
PMID:18483557
NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
G
Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:22282195) GO_REF:0000024
Ensembl RGD UniProt
PMID:22282195
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Flvcr2
FLVCR choline and putative heme transporter 2
acts_upstream_of_or_within
ISO
(PMID:32369453)
RGD
PMID:32369453
NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
G
Gata1
GATA binding protein 1
involved_in
ISO
(PMID:12045236)
RGD
PMID:12045236
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
G
Gata2
GATA binding protein 2
involved_in
ISO
(PMID:12045236)
RGD
PMID:12045236
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Foxi3
forkhead box I3
involved_in
ISO
(PMID:26450968)
RGD
PMID:26450968
NCBI chr 4:102,933,487...102,937,655
Ensembl chr 4:102,933,409...102,937,655
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:2178778 (PMID:15068794)
RGD
PMID:15068794
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Ptch1
patched 1
acts_upstream_of_or_within
ISO
MGI:1095405 (PMID:24492243)
RGD
PMID:24492243
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
G
Ptch2
patched 2
acts_upstream_of_or_within
ISO
MGI:105373 (PMID:24492243)
RGD
PMID:24492243
NCBI chr 5:130,571,956...130,592,506
Ensembl chr 5:130,572,312...130,592,405
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1926500|MGI:3583755 (PMID:17079689)
RGD
PMID:17079689
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3803178 (PMID:22387004)
Ensembl RGD
PMID:22387004
GO_REF:0000107
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
G
Chrd
chordin
involved_in
ISO
(PMID:11969257)
RGD
PMID:11969257
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:1931521 (PMID:19407216)
RGD
PMID:19407216
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Gata4
GATA binding protein 4
acts_upstream_of_or_within
ISO
MGI:3053826|MGI:3526854 (PMID:16940177)
RGD
PMID:16940177
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:2447212|MGI:2684314 (PMID:16107537)
RGD
PMID:16107537
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Sostdc1
sclerostin domain containing 1
acts_upstream_of
ISO
MGI:3604658 (PMID:22509524)
RGD
PMID:22509524
NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
G
Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of
ISO
MGI:4398888 (PMID:19759516)
RGD
PMID:19759516
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
G
Dock7
dedicator of cytokinesis 7
involved_in
ISO
(PMID:16982419)
RGD
PMID:16982419
NCBI chr 5:113,599,371...113,782,871
Ensembl chr 5:113,600,198...113,782,813
G
Fgf13
fibroblast growth factor 13
involved_in NOT|involved_in
ISS ISO
GO_REF:0000024 (PMID:22726441)
UniProt RGD
PMID:22726441
GO_REF:0000024
NCBI chr X:137,276,498...137,800,056
Ensembl chr X:137,276,511...137,800,391
G
Rab10
RAB10, member RAS oncogene family
involved_in
IMP
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
G
Otx2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
MGI:2178753 (PMID:14625556)
RGD
PMID:14625556
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
G
Zdhhc16
zinc finger DHHC-type palmitoyltransferase 16
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:240,745,606...240,757,009
Ensembl chr 1:240,745,641...240,757,009
G
Lhx6
LIM homeobox 6
acts_upstream_of_or_within
ISO
MGI:108067 (PMID:18339674)
RGD
PMID:18339674
NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1306803|MGI:1857494 (PMID:18339674)
Ensembl RGD
PMID:18339674
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Tfap2c
transcription factor AP-2 gamma
acts_upstream_of_or_within
ISO
MGI:2176695 (PMID:19749747)
RGD
PMID:19749747
NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
G
Ntf4
neurotrophin 4
involved_in acts_upstream_of_or_within
ISS ISO
PMID:10681461 MGI:1933845 (PMID:10681461)
RGD
PMID:10681461 PMID:10681461
RGD:8554690
NCBI chr 1:95,893,560...95,896,391
Ensembl chr 1:95,893,457...95,897,243
G
Hes5
hes family bHLH transcription factor 5
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2149674 (PMID:10821751)
UniProt RGD
PMID:10821751
GO_REF:0000024
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Nfe2l1
NFE2 like bZIP transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:23840004)
RGD
PMID:23840004
NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
(PMID:21068328)
RGD
PMID:21068328
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17706960)
Ensembl RGD
PMID:17706960
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ntf3
neurotrophin 3
acts_upstream_of_or_within
ISO
MGI:1933844 (PMID:10384880)
RGD
PMID:10384880
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:3605892 (PMID:16330018)
RGD
PMID:16330018
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
G
Nfia
nuclear factor I/A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:6280648 (PMID:31128945)
Ensembl RGD
PMID:31128945
GO_REF:0000107
NCBI chr 5:112,436,655...112,781,878
Ensembl chr 5:112,436,644...112,775,885
G
Nfib
nuclear factor I/B
acts_upstream_of_or_within
ISO
MGI:5052268 (PMID:31128945)
RGD
PMID:31128945
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Nfix
nuclear factor I X
acts_upstream_of_or_within
ISO
MGI:3802570 (PMID:31128945)
RGD
PMID:31128945
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2429649 (PMID:12842915)
RGD
PMID:12842915
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Lats1
large tumor suppressor kinase 1
acts_upstream_of_or_within
ISO
MGI:1354386 (PMID:23824537)
RGD
PMID:23824537
NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
G
Lats2
large tumor suppressor kinase 2
acts_upstream_of_or_within
ISO
MGI:1333883 (PMID:23824537)
RGD
PMID:23824537
NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220
G
Prdm14
PR/SET domain 14
acts_upstream_of_or_within
ISO
(PMID:24183668)
RGD
PMID:24183668
NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
G
Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:18997111), (PMID:21915337) GO_REF:0000024
Ensembl RGD UniProt
PMID:18997111 PMID:21915337
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:10804175)
Ensembl RGD
PMID:10804175
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Tm2d3
TM2 domain containing 3
involved_in
ISO
FB:FBgn0000077 (PMID:27764101)
RGD
PMID:27764101
NCBI chr 1:119,267,194...119,277,094
Ensembl chr 1:119,264,576...119,277,099
G
Nr2f2
nuclear receptor subfamily 2, group F, member 2
involved_in
ISO
(PMID:18815287)
RGD
PMID:18815287
NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
G
Pdpn
podoplanin
involved_in
ISS ISO
GO_REF:0000024 (PMID:20110424)
UniProt RGD
PMID:20110424
GO_REF:0000024
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Prox1
prospero homeobox 1
involved_in
ISO
(PMID:18815287)
RGD
PMID:18815287
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Chrd
chordin
involved_in
ISO
(PMID:11969257)
RGD
PMID:11969257
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Nanog
Nanog homeobox
acts_upstream_of_or_within
ISO
MGI:109452 (PMID:16801560)
RGD
PMID:16801560
NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
G
Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:10742100)
RGD
PMID:10742100
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Smad1
SMAD family member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1919200 (PMID:16801560)
Ensembl RGD
PMID:16801560
GO_REF:0000107
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857137 (PMID:7657163)
Ensembl RGD
PMID:7657163
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Eya1
EYA transcriptional coactivator and phosphatase 1
involved_in
ISO
(PMID:17785448)
RGD
PMID:17785448
NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
G
Hoxa11
homeobox A11
involved_in
ISO
(PMID:17785448)
RGD
PMID:17785448
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:17785448)
UniProt RGD
PMID:17785448
GO_REF:0000024
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of
ISO
MGI:98956 (PMID:17462603)
RGD
PMID:17462603
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Six2
SIX homeobox 2
involved_in
ISO
(PMID:17785448)
RGD
PMID:17785448
NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
G
Tbx6
T-box transcription factor 6
acts_upstream_of_or_within
ISO
MGI:2447721 (PMID:9490412)
RGD
PMID:9490412
NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647|MGI:3629660 (PMID:15800000)
RGD
PMID:15800000
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179190 (PMID:18816853)
UniProt RGD
PMID:18816853
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Mef2c
myocyte enhancer factor 2C
acts_upstream_of_or_within
ISO
MGI:3718323 (PMID:17786239)
RGD
PMID:17786239
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Tbx2
T-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3505715 (PMID:15459098)
RGD
PMID:15459098
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
G
Myl2
myosin light chain 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:1379240)
GO_Central RGD
PMID:1379240
GO_REF:0000033
NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
G
Epas1
endothelial PAS domain protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:21106753)
Ensembl RGD
PMID:21106753
GO_REF:0000107
NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228
G
Pitx1
paired-like homeodomain 1
acts_upstream_of_or_within
ISO
MGI:2384494 (PMID:17384148)
RGD
PMID:17384148
NCBI chr17:8,794,134...8,800,292
Ensembl chr17:8,794,134...8,800,291
G
Tcf7l2
transcription factor 7 like 2
involved_in acts_upstream_of_or_within
ISO
(PMID:10937998)
RGD
PMID:10937998
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Myod1
myogenic differentiation 1
involved_in acts_upstream_of_or_within
ISS ISO
PMID:12486129 (PMID:12486129)
RGD
PMID:12486129 PMID:12486129
RGD:8554648
NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
G
Itgb1
integrin subunit beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154539 (PMID:9004034)
Ensembl RGD
PMID:9004034
GO_REF:0000107
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
G
Glis1
GLIS family zinc finger 1
involved_in
ISO
(PMID:30544251)
RGD
PMID:30544251
NCBI chr 5:122,222,155...122,412,141
Ensembl chr 5:122,222,128...122,412,141
G
Nanog
Nanog homeobox
acts_upstream_of_or_within
ISO
MGI:109452 (PMID:16801560)
RGD
PMID:16801560
NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:2651850 (PMID:11567614)
RGD
PMID:11567614
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Sostdc1
sclerostin domain containing 1
acts_upstream_of_or_within
ISO
MGI:3604658 (PMID:22509524)
RGD
PMID:22509524
NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
G
Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of_or_within
ISO
MGI:4398888 (PMID:19759516)
RGD
PMID:19759516
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:11425898)
Ensembl RGD
PMID:11425898
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Gfi1
growth factor independent 1 transcriptional repressor
acts_upstream_of_or_within
ISO
MGI:2449921 (PMID:16230531)
RGD
PMID:16230531
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
G
Fzd7
frizzled class receptor 7
involved_in
ISO
(PMID:18681827)
RGD
PMID:18681827
NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18593560)
RGD
PMID:18593560
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18593560)
RGD
PMID:18593560
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of_or_within
ISO
MGI:98956 (PMID:17462603)
RGD
PMID:17462603
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Casz1
castor zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3052661|MGI:4841554 (PMID:25654255)
RGD
PMID:25654255
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
G
Cd69
Cd69 molecule
involved_in
ISO
(PMID:24752896)
RGD
PMID:24752896
NCBI chr 4:162,725,446...162,733,364
Ensembl chr 4:162,725,446...162,733,542
G
Jak3
Janus kinase 3
involved_in
ISO IEA
(PMID:20696842) GO_REF:0000107
RGD Ensembl
PMID:20696842
GO_REF:0000107
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
G
Lgals1
galectin 1
involved_in
ISO IEA
(PMID:24752896) GO_REF:0000107
RGD Ensembl
PMID:24752896
GO_REF:0000107
NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
G
Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:28065600)
RGD
PMID:28065600
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
G
Stat5a
signal transducer and activator of transcription 5A
involved_in
ISO IEA
(PMID:20696842) GO_REF:0000107
RGD Ensembl
PMID:20696842
GO_REF:0000107
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:21151104)
RGD
PMID:21151104
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Tnfsf18
TNF superfamily member 18
involved_in
ISO
(PMID:24107315)
RGD
PMID:24107315
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637 (PMID:23933587)
RGD
PMID:23933587
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
IEA ISO
GO_REF:0000107 MGI:1857473|MGI:3773698|MGI:4867385 (PMID:17294360), (PMID:23933587)
Ensembl RGD
PMID:17294360 PMID:23933587
GO_REF:0000107
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Sfrp1
secreted frizzled-related protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3045799 (PMID:20130188)
Ensembl RGD
PMID:20130188
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Gsc
goosecoid homeobox
involved_in
ISO
(PMID:24290375)
RGD
PMID:24290375
NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:11032813), (PMID:12397111)
RGD
PMID:11032813 PMID:12397111
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:24243019) MGI:1857470|MGI:2151057 (PMID:12629181), (PMID:16020526), (PMID:16715081), (PMID:19191219)
UniProt RGD
PMID:12629181 PMID:16020526 PMID:16715081 PMID:19191219 PMID:24243019
GO_REF:0000024
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Atoh1
atonal bHLH transcription factor 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Atoh7
atonal bHLH transcription factor 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2158495 (PMID:17698011)
Ensembl RGD
PMID:17698011
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Chrd
chordin
involved_in
ISO
(PMID:11969257)
RGD
PMID:11969257
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Epop
elongin BC and polycomb repressive complex 2 associated protein
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:23180766)
GO_Central RGD
PMID:23180766
GO_REF:0000033
NCBI chr10:82,624,392...82,625,912
Ensembl chr10:82,624,392...82,625,912
G
Foxn4
forkhead box N4
acts_upstream_of_or_within
ISO
MGI:96919 (PMID:16020526)
RGD
PMID:16020526
NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:4818492 (PMID:19088086)
RGD
PMID:19088086
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Gbx1
gastrulation brain homeobox 1
acts_upstream_of_or_within
ISO
(PMID:24010020)
RGD
PMID:24010020
NCBI chr 4:10,645,957...10,672,486
Ensembl chr 4:10,645,957...10,672,486
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276 (PMID:16168404)
RGD
PMID:16168404
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Gsx1
GS homeobox 1
acts_upstream_of_or_within
ISO
MGI:95843 (PMID:16715081)
RGD
PMID:16715081
NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:95842 (PMID:16715081)
RGD
PMID:16715081
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Id2
inhibitor of DNA binding 2
acts_upstream_of
ISS ISO
GO_REF:0000024 (PMID:17681138)
UniProt RGD
PMID:17681138
GO_REF:0000024
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:109156 (PMID:14766174)
RGD
PMID:14766174
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
acts_upstream_of_or_within
ISO
MGI:101791|MGI:3046260 (PMID:14766174)
RGD
PMID:14766174
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Lbx1
ladybird homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738 (PMID:12062039)
RGD
PMID:12062039
NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690
G
Myt1l
myelin transcription factor 1-like
involved_in
ISS ISO
GO_REF:0000024 (PMID:24243019), (PMID:28379941)
UniProt RGD
PMID:24243019 PMID:28379941
GO_REF:0000024
NCBI chr 6:46,164,742...46,564,234
Ensembl chr 6:46,428,150...46,561,671
G
Nkx2-1
NK2 homeobox 1
acts_upstream_of_or_within
ISO
MGI:3653645 (PMID:18786356), (PMID:20181579)
RGD
PMID:18786356 PMID:20181579
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of
ISO
MGI:2651850 (PMID:11567614)
RGD
PMID:11567614
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:99460 (PMID:16120638)
RGD
PMID:16120638
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Notch3
notch receptor 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97363 (PMID:16120638)
Ensembl RGD
PMID:16120638
GO_REF:0000107
NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
(PMID:11425901)
RGD
PMID:11425901
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Olig1
oligodendrocyte transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179311 (PMID:11955448)
Ensembl RGD
PMID:11955448
GO_REF:0000107
NCBI chr11:30,514,379...30,516,521
Ensembl chr11:30,514,379...30,516,521
G
Olig2
oligodendrocyte transcription factor 2
acts_upstream_of_or_within
ISO
MGI:2179312 (PMID:11955448)
RGD
PMID:11955448
NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
G
Otx2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
MGI:2178753|MGI:2446434|MGI:2661065|MGI:3665330 (PMID:16339193), (PMID:26166575)
RGD
PMID:16339193 PMID:26166575
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
G
Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:97491 (PMID:9858722)
RGD
PMID:9858722
NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
G
Pax7
paired box 7
acts_upstream_of_or_within
ISO
MGI:97487 (PMID:9858722)
RGD
PMID:9858722
NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
G
Pou3f2
POU class 3 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:24243019)
UniProt RGD
PMID:24243019
GO_REF:0000024
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
G
Ptf1a
pancreas associated transcription factor 1a
acts_upstream_of_or_within
ISO
(PMID:16039563)
RGD
PMID:16039563
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
G
Runx1
RUNX family transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:25834056)
RGD
PMID:25834056
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1934268 (PMID:16221724) GO_REF:0000024
Ensembl RGD UniProt
PMID:16221724
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smad4
SMAD family member 4
acts_upstream_of_or_within
ISO
MGI:2386393|MGI:2386570 (PMID:17698011)
RGD
PMID:17698011
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3589809 (PMID:17015430)
RGD
PMID:17015430
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within
ISO
(PMID:15744664)
RGD
PMID:15744664
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15744664)
Ensembl RGD
PMID:15744664
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tunar
transmembrane neural differentiation associated intracellular calcium regulator
acts_upstream_of_or_within
ISO
(PMID:24530304)
RGD
PMID:24530304
NCBI chr 6:124,245,949...124,293,440
G
Wnt1
Wnt family member 1
acts_upstream_of_or_within
ISO
MGI:2153126 (PMID:16339193)
RGD
PMID:16339193
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
G
Zfp521
zinc finger protein 521
acts_upstream_of_or_within
ISO
(PMID:25834056)
RGD
PMID:25834056
NCBI chr18:4,775,952...5,068,592
Ensembl chr18:4,787,295...5,068,458
G
Cdc42
cell division cycle 42
acts_upstream_of_or_within
ISO
MGI:3619134 (PMID:16892058)
RGD
PMID:16892058
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567|MGI:2176173 (PMID:15708565)
Ensembl RGD
PMID:15708565
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
(PMID:24997765)
RGD
PMID:24997765
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
(PMID:22726835)
RGD
PMID:22726835
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
G
Lbx1
ladybird homeobox 1
acts_upstream_of_or_within
ISO
MGI:1351209|MGI:2182635 (PMID:16234809)
RGD
PMID:16234809
NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690
G
Otx2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
MGI:2446434|MGI:2661065 (PMID:19592574)
RGD
PMID:19592574
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
G
Prox1
prospero homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386336 (PMID:12692551)
RGD
PMID:12692551
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Prrx1
paired related homeobox 1
acts_upstream_of_or_within
ISO
(PMID:23447615)
RGD
PMID:23447615
NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866
G
Wnt1
Wnt family member 1
acts_upstream_of_or_within
ISO
MGI:3046939 (PMID:16339193)
RGD
PMID:16339193
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:24243019) MGI:1857470 (PMID:16469766)
UniProt RGD
PMID:16469766 PMID:24243019
GO_REF:0000024
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:18997111) GO_REF:0000107
UniProt RGD Ensembl
PMID:18997111
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Dmrta2
DMRT-like family A2
acts_upstream_of_or_within
ISO
(PMID:21576465)
RGD
PMID:21576465
NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
G
Ehmt2
euchromatic histone lysine methyltransferase 2
acts_upstream_of_or_within
ISO
MGI:4418499 (PMID:24584053)
RGD
PMID:24584053
NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
G
Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780 (PMID:22513373)
RGD
PMID:22513373
NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
G
Fev
FEV transcription factor, ETS family member
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2449922 (PMID:20818386)
Ensembl RGD
PMID:20818386
GO_REF:0000107
NCBI chr 9:76,439,164...76,443,603
Ensembl chr 9:76,439,172...76,443,065
G
Fkbp8
FKBP prolyl isomerase 8
acts_upstream_of_or_within
ISO
MGI:3042750 (PMID:15105374)
RGD
PMID:15105374
NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
G
Foxa1
forkhead box A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347476 (PMID:17596284)
Ensembl RGD
PMID:17596284
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347472|MGI:2176222|MGI:2177337 (PMID:17596284), (PMID:17922007)
RGD
PMID:17596284 PMID:17922007
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:2150162 (PMID:15930101)
RGD
PMID:15930101
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Isl1
ISL LIM homeobox 1
involved_in
IEA ISO IBA
GO_REF:0000002 (PMID:18849985) GO_REF:0000033
InterPro RGD GO_Central
PMID:18849985
GO_REF:0000002 GO_REF:0000033
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Mir125a
microRNA 125a
involved_in
ISO
(PMID:22357933)
RGD
PMID:22357933
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
G
Myt1l
myelin transcription factor 1-like
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:24243019), (PMID:28379941) GO_REF:0000107
UniProt RGD Ensembl
PMID:24243019 PMID:28379941
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:46,164,742...46,564,234
Ensembl chr 6:46,428,150...46,561,671
G
Nfia
nuclear factor I/A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:6280648 (PMID:31128945)
Ensembl RGD
PMID:31128945
GO_REF:0000107
NCBI chr 5:112,436,655...112,781,878
Ensembl chr 5:112,436,644...112,775,885
G
Nfib
nuclear factor I/B
acts_upstream_of_or_within
ISO
MGI:5052268 (PMID:31128945)
RGD
PMID:31128945
NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479
G
Nfix
nuclear factor I X
acts_upstream_of_or_within
ISO
MGI:3802570 (PMID:31128945)
RGD
PMID:31128945
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100|MGI:97451 (PMID:16339193), (PMID:19592574)
RGD
PMID:16339193 PMID:19592574
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Ntrk3
neurotrophic receptor tyrosine kinase 3
IMP
RGD
PMID:15247919
RGD:2325628
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
G
Otx2
orthodenticle homeobox 2
acts_upstream_of_or_within
ISO
MGI:2176222|MGI:2661065 (PMID:15888661)
RGD
PMID:15888661
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
G
Pou3f2
POU class 3 homeobox 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24243019) GO_REF:0000024
Ensembl RGD UniProt
PMID:24243019
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
G
Pou4f1
POU class 4 homeobox 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19877281), (PMID:20096094)
Ensembl RGD
PMID:19877281 PMID:20096094
GO_REF:0000107
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:109344 (PMID:22513373)
RGD
PMID:22513373
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:22357933)
Ensembl RGD
PMID:22357933
GO_REF:0000107
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2429649 (PMID:12842915)
RGD
PMID:12842915
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tbx1
T-box transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1351209|MGI:2179191 (PMID:15064766), (PMID:15084464)
RGD
PMID:15064766 PMID:15084464
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tlx3
T-cell leukemia, homeobox 3
acts_upstream_of_or_within
ISO
MGI:104867|MGI:2180105|MGI:98769 (PMID:15064766), (PMID:16234809)
RGD
PMID:15064766 PMID:16234809
NCBI chr10:17,789,706...17,792,207
Ensembl chr10:17,790,053...17,792,207
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in
ISO
(PMID:14532329)
RGD
PMID:14532329
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:19144989) GO_REF:0000024
Ensembl RGD UniProt
PMID:19144989
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:17678855)
RGD
PMID:17678855
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856155 (PMID:9828088)
Ensembl RGD
PMID:9828088
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Sox6
SRY-box transcription factor 6
acts_upstream_of_or_within
ISO
MGI:2447148 (PMID:17084361)
RGD
PMID:17084361
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
G
Men1
menin 1
acts_upstream_of_or_within
ISO
MGI:109452|MGI:1328787|MGI:99829 (PMID:15150273)
RGD
PMID:15150273
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
G
Runx2
RUNX family transcription factor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1316736 (PMID:15150273)
Ensembl RGD
PMID:15150273
GO_REF:0000107
NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
G
Sh3pxd2b
SH3 and PX domains 2B
involved_in
ISO
(PMID:27711054)
RGD
PMID:27711054
NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
G
Smad1
SMAD family member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1316736 (PMID:15150273)
Ensembl RGD
PMID:15150273
GO_REF:0000107
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
G
Smad5
SMAD family member 5
acts_upstream_of_or_within
ISO
MGI:1316736 (PMID:15150273)
RGD
PMID:15150273
NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634
G
Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:97347 (PMID:17988662)
RGD
PMID:17988662
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1339708|MGI:1932100 (PMID:17202186), (PMID:17988662)
RGD
PMID:17202186 PMID:17988662
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:97347 (PMID:17988662)
RGD
PMID:17988662
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1339708 (PMID:17988662)
RGD
PMID:17988662
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1857865 (PMID:9106663)
RGD
PMID:9106663
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
MGI:1857489 (PMID:9126297)
RGD
PMID:9126297
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:2651850 (PMID:11567614)
RGD
PMID:11567614
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of_or_within
ISO
MGI:4398888 (PMID:19759516)
RGD
PMID:19759516
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:18635606)
RGD
PMID:18635606
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Gfi1
growth factor independent 1 transcriptional repressor
acts_upstream_of_or_within
ISO
MGI:2449921 (PMID:16230531)
RGD
PMID:16230531
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
G
Pax6
paired box 6
IMP
RGD
PMID:11880342
RGD:729590
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Wnt3a
Wnt family member 3A
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Brd2
bromodomain containing 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28262505)
UniProt RGD
PMID:28262505
GO_REF:0000024
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
G
Brd4
bromodomain containing 4
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Il23a
interleukin 23 subunit alpha
involved_in
IBA ISO
GO_REF:0000033 (PMID:19501566)
GO_Central RGD
PMID:19501566
GO_REF:0000033
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Opa1
OPA1, mitochondrial dynamin like GTPase
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:36171294) GO_REF:0000107
UniProt RGD Ensembl
PMID:36171294
GO_REF:0000024 GO_REF:0000107
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Sox17
SRY-box transcription factor 17
involved_in
ISO
(PMID:17360443)
RGD
PMID:17360443
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO ISS IEA
(PMID:18823971) GO_REF:0000024 GO_REF:0000107
RGD CAFA Ensembl
PMID:18823971
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Gdf3
growth differentiation factor 3
involved_in
ISO
(PMID:18823971)
RGD
PMID:18823971
NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
G
Pax7
paired box 7
acts_upstream_of_or_within
ISO
MGI:1857831|MGI:3047633 (PMID:23070814)
RGD
PMID:23070814
NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
G
Zfp157
zinc finger protein 157
acts_upstream_of_or_within
ISO
MGI:4124834 (PMID:22588720)
RGD
PMID:22588720
NCBI chr12:16,248,230...16,279,459
Ensembl chr12:16,248,230...16,270,698
G
Lmo4
LIM domain only 4
acts_upstream_of_or_within
ISO
MGI:3664560 (PMID:19323994)
RGD
PMID:19323994
NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
G
Esrp1
epithelial splicing regulatory protein 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:29107558)
UniProt RGD
PMID:29107558
GO_REF:0000024
NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:95522 (PMID:16943278)
RGD
PMID:16943278
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:1338938 (PMID:16943278)
RGD
PMID:16943278
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(PMID:15073157)
RGD
PMID:15073157
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Casz1
castor zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3052661|MGI:4841554 (PMID:25654255)
RGD
PMID:25654255
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
G
Rara
retinoic acid receptor, alpha
involved_in
ISO
(PMID:17905941)
RGD
PMID:17905941
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Tbx18
T-box transcription factor 18
involved_in
ISO
(PMID:23242162)
RGD
PMID:23242162
NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
G
Pax7
paired box 7
acts_upstream_of_or_within
ISO
MGI:1857831 (PMID:11030621)
RGD
PMID:11030621
NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:15215207)
RGD
PMID:15215207
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:95728 (PMID:15215207)
RGD
PMID:15215207
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO
MGI:4840420 (PMID:19684112)
RGD
PMID:19684112
NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:15215207)
RGD
PMID:15215207
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:95728 (PMID:15215207)
RGD
PMID:15215207
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Sufu
SUFU negative regulator of hedgehog signaling
acts_upstream_of_or_within
ISO
MGI:4840420 (PMID:19684112)
RGD
PMID:19684112
NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
G
Hoxc10
homeo box C10
acts_upstream_of_or_within
ISO
MGI:96202 (PMID:18065432)
RGD
PMID:18065432
NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966
G
Hoxd10
homeo box D10
acts_upstream_of_or_within
ISO
MGI:96192 (PMID:18065432)
RGD
PMID:18065432
NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:102673 (PMID:19666821)
Ensembl RGD
PMID:19666821
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:102673 (PMID:19666821)
Ensembl RGD
PMID:19666821
GO_REF:0000107
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:101791|MGI:109156 (PMID:19666821)
RGD
PMID:19666821
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Lmo4
LIM domain only 4
involved_in
ISO
(PMID:18539116)
RGD
PMID:18539116
NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
G
Mnx1
motor neuron and pancreas homeobox 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18539116) MGI:2182358|MGI:2182361|MGI:2182363 (PMID:10482234)
GO_Central RGD
PMID:10482234 PMID:18539116
GO_REF:0000033
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
G
Olig3
oligodendrocyte transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3573868 (PMID:15769945)
RGD
PMID:15769945
NCBI chr 1:14,081,259...14,083,336
Ensembl chr 1:14,081,328...14,082,149
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:18287202)
RGD
PMID:18287202
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
(PMID:18287202)
RGD
PMID:18287202
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Olig2
oligodendrocyte transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:18287202)
RGD
PMID:18287202
NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
G
Dmrta2
DMRT-like family A2
acts_upstream_of_or_within
ISO
(PMID:21576465)
RGD
PMID:21576465
NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of
ISO
MGI:98956 (PMID:17462603)
RGD
PMID:17462603
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
(PMID:20228271)
RGD
PMID:20228271
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
(PMID:20228271)
RGD
PMID:20228271
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:9876181)
RGD
PMID:9876181
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
MGI:2150162 (PMID:11124115)
RGD
PMID:11124115
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Bcl2
BCL2, apoptosis regulator
acts_upstream_of_or_within
ISO
MGI:2156165 (PMID:8788039)
RGD
PMID:8788039
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Foxn1
forkhead box N1
involved_in
ISO
(PMID:24184560)
RGD
PMID:24184560
NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
G
Il7
interleukin 7
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857652 (PMID:9252127)
Ensembl RGD
PMID:9252127
GO_REF:0000107
NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
acts_upstream_of_or_within
ISO
MGI:1857113 (PMID:8788039)
RGD
PMID:8788039
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
G
Rag2
recombination activating 2
acts_upstream_of_or_within
ISO
MGI:1858556 (PMID:8788039)
RGD
PMID:8788039
NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857590 (PMID:8788039)
Ensembl RGD
PMID:8788039
GO_REF:0000107
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
MGI:103034 (PMID:20706986)
RGD
PMID:20706986
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Mtor
mechanistic target of rapamycin kinase
involved_in
IEA ISO
GO_REF:0000107 (PMID:26410627)
Ensembl RGD
PMID:26410627
GO_REF:0000107
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Spn
sialophorin
involved_in
ISO ISS
(PMID:18036228) GO_REF:0000024
RGD UniProt
PMID:18036228
GO_REF:0000024
NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628
G
Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
ISO
MGI:96556 (PMID:20706986)
RGD
PMID:20706986
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:10761931)
RGD
PMID:10761931
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Batf
basic leucine zipper ATF-like transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:19578362), (PMID:22983707)
UniProt RGD
PMID:19578362 PMID:22983707
GO_REF:0000024
NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
G
Il6
interleukin 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:16990136), (PMID:27893700)
UniProt RGD
PMID:16990136 PMID:27893700
GO_REF:0000024
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178
G
Il6r
interleukin 6 receptor
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:27893700) GO_REF:0000107
UniProt RGD Ensembl
PMID:27893700
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
G
Irf4
interferon regulatory factor 4
involved_in
ISO
(PMID:22983707)
RGD
PMID:22983707
NCBI chr17:33,721,800...33,742,570
Ensembl chr17:33,721,811...33,740,070
G
Ly9
lymphocyte antigen 9
involved_in
ISO
(PMID:22184727)
RGD
PMID:22184727
NCBI chr13:84,079,345...84,100,783
Ensembl chr13:84,079,458...84,100,823
G
Otud5
OTU deubiquitinase 5
acts_upstream_of_or_within
ISO
MGI:2386448|MGI:5752247 (PMID:25470037)
RGD
PMID:25470037
NCBI chr X:14,626,173...14,659,331
Ensembl chr X:14,626,164...14,659,573
G
Slamf6
SLAM family member 6
involved_in
ISO
(PMID:22184727)
RGD
PMID:22184727
NCBI chr13:84,384,561...84,405,300
Ensembl chr13:84,383,742...84,405,300
G
Stat3
signal transducer and activator of transcription 3
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28065600) GO_REF:0000107
UniProt RGD Ensembl
PMID:28065600
GO_REF:0000024 GO_REF:0000107
NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057
G
Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:10742100)
RGD
PMID:10742100
NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891
G
Tead4
TEA domain transcription factor 4
acts_upstream_of_or_within
ISO
MGI:106907 (PMID:18083014)
RGD
PMID:18083014
NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:17202186), (PMID:17988662)
RGD
PMID:17202186 PMID:17988662
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16020526)
UniProt RGD
PMID:16020526
GO_REF:0000024
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
UniProtKB:Q8K3Q3 (PMID:17728344) GO_REF:0000107
RGD Ensembl
PMID:17728344
GO_REF:0000107
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
G
Foxn4
forkhead box N4
involved_in
ISO
(PMID:16020526), (PMID:17728344)
RGD
PMID:16020526 PMID:17728344
NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:10217145)
RGD
PMID:10217145
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Dbx1
developing brain homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182329 (PMID:11239429)
RGD
PMID:11239429
NCBI chr 1:99,348,638...99,354,173
Ensembl chr 1:99,349,608...99,354,038
G
Dmrt3
doublesex and mab-3 related transcription factor 3
acts_upstream_of_or_within
ISO
MGI:4420993 (PMID:22932389)
RGD
PMID:22932389
NCBI chr 1:223,244,340...223,264,254
Ensembl chr 1:223,248,747...223,262,530
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
(PMID:19666821)
RGD
PMID:19666821
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within
IDA
PMID:9230312
MGI
PMID:9230312
RGD:8553789
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Sox1
SRY-box transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3653406 (PMID:20844123)
RGD
PMID:20844123
NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762
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