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ONTOLOGY REPORT - ANNOTATIONS


Term:innate immune response
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Accession:GO:0045087 term browser browse the term
Definition:Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
Synonyms:exact_synonym: innate immunity;   nonspecific immune response
 alt_id: GO:0002226
 xref: Reactome:R-HSA-168249 "Innate Immune System";   Wikipedia:Innate_immune_system
 never_in_taxon: NCBITaxon:2 ! Bacteria;   NCBITaxon:2157 ! Archaea;   NCBITaxon:4751 ! Fungi



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innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07035218.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr12:5,901,586...5,978,565 JBrowse link
G AC108595.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 7:122,951,378...122,953,062 JBrowse link
G Adam15 ADAM metallopeptidase domain 15 involved_in ISO
IBA
(PMID:22505472)
GO_REF:0000033
RGD
GO_Central
PMID:22505472 GO_REF:0000033 NCBI chr 2:177,052,363...177,062,879
Ensembl chr 2:174,754,633...174,765,113
JBrowse link
G Adar adenosine deaminase, RNA-specific involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:177,436,076...177,475,969
Ensembl chr 2:175,138,403...175,178,282
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:108,293,681...108,365,892
Ensembl chr 7:106,404,958...106,476,902
JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:11,966,769...11,983,056
Ensembl chr 7:11,316,228...11,332,399
JBrowse link
G Akirin2 akirin 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:53,897,792...53,918,873
Ensembl chr 5:49,108,220...49,122,568
JBrowse link
G Alpk1 alpha-kinase 1 involved_in ISO
IBA
(PMID:28222186), (PMID:28877472), (PMID:30111836)
(PMID:30111836)
GO_REF:0000033
RGD
GO_Central
PMID:28222186 PMID:28877472 PMID:30111836 GO_REF:0000033 NCBI chr 2:218,801,425...218,924,013
Ensembl chr 2:216,128,825...216,247,157
JBrowse link
G Ang angiogenin involved_in ISO (PMID:12548285) RGD PMID:12548285 NCBI chr15:26,786,233...26,796,883 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:26,871,842...26,889,421
Ensembl chr15:24,398,419...24,398,922
JBrowse link
G Ankhd1 ankyrin repeat and KH domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,436,296...28,534,954
Ensembl chr18:28,162,311...28,268,024
JBrowse link
G Ankrd17 ankyrin repeat domain 17 involved_in ISO
IBA
(PMID:23711367)
GO_REF:0000033
RGD
GO_Central
PMID:23711367 GO_REF:0000033 NCBI chr14:18,007,342...18,145,980
Ensembl chr14:17,721,932...17,862,617
JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:66,104,770...66,146,186
Ensembl chr 5:61,309,183...61,350,596
JBrowse link
G Anxa1 annexin A1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Apcs amyloid P component, serum involved_in ISO
IBA
(PMID:23544079)
GO_REF:0000033
RGD
GO_Central
PMID:23544079 GO_REF:0000033 NCBI chr13:87,905,532...87,906,508
Ensembl chr13:85,373,220...85,374,298
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:113,314,196...113,333,306
Ensembl chr 7:111,433,764...111,452,922
JBrowse link
G App amyloid beta precursor protein involved_in IDA
ISO
PMID:20209079
(PMID:20209079)
RGD PMID:20209079 PMID:20209079 RGD:10400853 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Arg1 arginase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:176,358,909...176,416,178
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Atg12 autophagy related 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:41,638,841...41,649,311
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg14 autophagy related 14 acts_upstream_of_or_within ISO (PMID:26764600) RGD PMID:26764600 NCBI chr15:23,275,457...23,306,817
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26764600)
GO_REF:0000107
RGD
Ensembl
PMID:26764600 GO_REF:0000107 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:26764600) RGD PMID:26764600 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO MGI:4417824 (PMID:19926846) RGD PMID:19926846 NCBI chr 9:84,126,071...84,136,723
Ensembl chr 9:76,677,404...76,687,986
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:79,319,708...79,340,226
Ensembl chr13:76,786,578...76,807,459
JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISO
ISS
(PMID:16831874)
GO_REF:0000024
RGD
UniProt
PMID:16831874 GO_REF:0000024 NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr 3:167,329,513...167,356,217
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Bpifa1 BPI fold containing family A, member 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:23499554)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:23499554 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:163,087,965...163,093,708
Ensembl chr 3:142,627,810...142,633,552
JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:163,106,258...163,113,039
Ensembl chr 3:142,646,103...142,652,883
JBrowse link
G Bpifc BPI fold containing family C involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:19,736,282...19,793,737
Ensembl chr 7:17,861,007...17,905,919
JBrowse link
G Bspry B-box and SPRY domain containing involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:80,942,974...80,965,157
Ensembl chr 5:75,927,405...75,949,583
JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:21919738)
GO_REF:0000033
(PMID:19036818)
UniProt
RGD
GO_Central
PMID:19036818 PMID:21919738 GO_REF:0000024 GO_REF:0000033 NCBI chr16:18,250,593...18,254,967
Ensembl chr16:18,217,407...18,220,979
JBrowse link
G C1qa complement C1q A chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:154,417,086...154,419,933
Ensembl chr 5:149,133,636...149,136,534
JBrowse link
G C1qb complement C1q B chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:154,402,276...154,407,827
Ensembl chr 5:149,118,846...149,124,407
JBrowse link
G C1qbp complement C1q binding protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:56,198,534...56,203,185
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G C1qc complement C1q C chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:154,410,845...154,414,208
Ensembl chr 5:149,127,415...149,131,017
JBrowse link
G C1r complement C1r involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:159,099,013...159,109,770
Ensembl chr 4:157,412,692...157,423,484
JBrowse link
G C1rl complement C1r subcomponent like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:159,080,495...159,097,066
Ensembl chr 4:157,394,200...157,410,134
JBrowse link
G C1s complement C1s involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:159,116,549...159,128,736
Ensembl chr 4:157,430,117...157,442,303
JBrowse link
G C3 complement C3 involved_in ISO (PMID:16034134) RGD PMID:16034134 NCBI chr 9:2,174,412...2,201,339
Ensembl chr 9:2,087,437...2,114,429
JBrowse link
G C4a complement C4A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,010,306...4,024,707
Ensembl chr20:4,005,731...4,020,080
JBrowse link
G C4b complement C4B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,201,979...4,216,292
Ensembl chr20:4,197,366...4,211,681
JBrowse link
G C4bpa complement component 4 binding protein, alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:44,627,959...44,663,552
Ensembl chr13:42,075,717...42,111,205
JBrowse link
G C4bpb complement component 4 binding protein, beta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:44,673,064...44,683,781
Ensembl chr13:42,120,798...42,131,817
JBrowse link
G C6 complement C6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:55,573,596...55,648,857
Ensembl chr 2:53,851,985...53,921,275
JBrowse link
G C8a complement C8 alpha chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:124,812,131...124,866,631
Ensembl chr 5:119,583,174...119,637,754
JBrowse link
G C9 complement C9 involved_in ISO (PMID:16034134) RGD PMID:16034134 NCBI chr 2:57,300,510...57,348,759
Ensembl chr 2:55,572,992...55,621,338
JBrowse link
G Calca calcitonin-related polypeptide alpha involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:178,312,636...178,317,588
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO
IBA
(PMID:7529412)
(PMID:17012259)
GO_REF:0000033
(PMID:12759353), (PMID:14978112), (PMID:17012259), (PMID:20209079), (PMID:9182550)
RGD
GO_Central
PMID:7529412 PMID:9182550 PMID:12759353 PMID:14978112 PMID:17012259 More... GO_REF:0000033 NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Cd14 CD14 molecule involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd180 CD180 molecule involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:33,855,991...33,899,936
JBrowse link
G Cd1d1 CD1d1 molecule involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:174,721,522...174,725,029
Ensembl chr 2:172,423,582...172,427,089
JBrowse link
G Cd55 CD55 molecule (Cromer blood group) involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:44,409,574...44,438,913
Ensembl chr13:41,857,395...41,885,831
JBrowse link
G Cd59b CD59b molecule involved_in ISO (PMID:16034134) RGD PMID:16034134 NCBI chr 3:110,914,008...110,932,489
Ensembl chr 3:90,459,162...90,478,847
JBrowse link
G Cfi complement factor I involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:221,062,206...221,104,790
Ensembl chr 2:218,387,990...218,430,561
JBrowse link
G Chid1 chitinase domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:206,024,059...206,059,259
Ensembl chr 1:196,587,509...196,629,606
JBrowse link
G Clec4a C-type lectin domain family 4, member A involved_in ISO (PMID:17050534) RGD PMID:17050534 NCBI chr 4:158,026,138...158,119,904
Ensembl chr 4:156,414,688...156,432,402
JBrowse link
G Clec4d C-type lectin domain family 4, member D acts_upstream_of_or_within ISO (PMID:23602766) RGD PMID:23602766 NCBI chr 4:158,275,287...158,286,978
Ensembl chr 4:156,589,792...156,598,848
JBrowse link
G Clec4e C-type lectin domain family 4, member E involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:20008526)
MGI:5013826 (PMID:23602766)
UniProt
RGD
PMID:20008526 PMID:23602766 GO_REF:0000024 NCBI chr 4:158,292,624...158,298,607
Ensembl chr 4:156,607,614...156,612,767
JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in ISO
IBA
(PMID:18496526)
(PMID:19074552)
GO_REF:0000033
RGD
GO_Central
PMID:18496526 PMID:19074552 GO_REF:0000033 NCBI chr 4:70,373,855...70,383,560
Ensembl chr 4:69,407,835...69,416,859
JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in IBA
ISO
GO_REF:0000033
(PMID:15845454)
GO_Central
RGD
PMID:15845454 GO_REF:0000033 NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Cnpy3 canopy FGF signaling regulator 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:21,731,088...21,745,448
Ensembl chr 9:14,233,428...14,247,831
JBrowse link
G Cr1l complement C3b/C4b receptor 1 like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:109,138,132...109,189,068
Ensembl chr13:106,574,858...106,660,445
JBrowse link
G Crcp CGRP receptor component involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:32,260,108...32,315,116
Ensembl chr12:26,623,976...26,768,225
JBrowse link
G Crp C-reactive protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:87,694,062...87,695,978
Ensembl chr13:85,124,977...85,175,178
JBrowse link
G Csf1 colony stimulating factor 1 involved_in IEA GO_REF:0000043
GO_REF:0000104
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 2:198,065,400...198,084,774
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:56,834,152...56,860,804
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Cyba cytochrome b-245 alpha chain involved_in ISO
IEA
ISS
(PMID:2243141)
(PMID:28351984)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:2243141 PMID:28351984 GO_REF:0000024 GO_REF:0000107 NCBI chr19:67,396,143...67,404,214
Ensembl chr19:50,487,597...50,495,721
JBrowse link
G Cybb cytochrome b-245 beta chain involved_in ISO (PMID:9774399)
(PMID:28351984)
RGD PMID:9774399 PMID:28351984 NCBI chr  X:16,030,596...16,065,065
Ensembl chr  X:13,359,430...13,392,586
JBrowse link
G Cybc1 cytochrome b-245 chaperone 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000043
(PMID:28351984)
GO_REF:0000107
(PMID:30361506)
UniProt
RGD
Ensembl
PMID:28351984 PMID:30361506 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr10:106,997,018...107,003,895
Ensembl chr10:106,498,725...106,505,596
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000043
(PMID:26997266)
UniProt
RGD
PMID:26997266 GO_REF:0000024 GO_REF:0000043 NCBI chr19:34,487,491...34,547,311
Ensembl chr19:18,314,019...18,373,658
JBrowse link
G Cyld-ps1 CYLD lysine 63 deubiquitinase, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:19,999,709...20,003,695
Ensembl chr 5:15,202,251...15,205,291
JBrowse link
G Ddx1 DEAD-box helicase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:41,725,365...41,756,236
Ensembl chr 6:35,996,469...36,027,365
JBrowse link
G Ddx21 DExD-box helicase 21 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:31,077,044...31,097,238
Ensembl chr20:30,534,319...30,554,543
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:18583960) RGD PMID:18583960 NCBI chr  X:12,152,346...12,165,983
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Defa5 defensin alpha 5 involved_in ISO (PMID:21861459) RGD PMID:21861459 NCBI chr16:77,044,994...77,047,318
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:12010999) RGD PMID:12010999 NCBI chr16:77,001,326...77,016,068
Ensembl chr16:70,298,863...70,313,604
JBrowse link
G Defb105a defensin beta 105A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:76,838,686...76,841,113
Ensembl chr16:70,725,701...70,728,143
Ensembl chr16:70,725,701...70,728,143
JBrowse link
G Defb105b defensin beta 105B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:77,428,110...77,431,282
Ensembl chr16:70,725,701...70,728,143
Ensembl chr16:70,725,701...70,728,143
JBrowse link
G Defb13 defensin beta 13 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:76,831,868...76,833,977
Ensembl chr16:70,129,625...70,131,473
JBrowse link
G Defb15 defensin beta 15 involved_in ISO (PMID:24189797) RGD PMID:24189797 NCBI chr16:76,843,661...76,846,359
Ensembl chr16:70,141,193...70,143,834
JBrowse link
G Defb17 defensin beta 17 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:28,376,792...28,380,421 JBrowse link
G Defb18 defensin beta 18 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:28,348,776...28,349,793
Ensembl chr 9:20,852,300...20,853,211
JBrowse link
G Defb19 defensin beta 19 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,490,614...161,498,261
Ensembl chr 3:141,030,377...141,037,888
JBrowse link
G Defb20 defensin beta 20 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,408,395...161,411,194
Ensembl chr 3:140,948,154...140,950,777
JBrowse link
G Defb21 defensin beta 21 involved_in ISO (PMID:33224970) RGD PMID:33224970 NCBI chr 3:161,503,090...161,504,507
Ensembl chr 3:141,042,810...141,044,184
JBrowse link
G Defb22 defensin beta 22 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,417,380...161,421,659
Ensembl chr 3:140,957,090...140,961,373
JBrowse link
G Defb23 defensin beta 23 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,383,615...161,390,685
Ensembl chr 3:140,923,474...140,927,686
JBrowse link
G Defb24 defensin beta 24 involved_in ISO
IEA
(PMID:24449502)
GO_REF:0000002
RGD
InterPro
PMID:24449502 GO_REF:0000002 NCBI chr 3:161,506,850...161,512,983
Ensembl chr 3:141,046,564...141,052,753
JBrowse link
G Defb25 defensin beta 25 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,559,086...161,560,025
Ensembl chr 3:141,098,856...141,099,696
JBrowse link
G Defb26 defensin beta 26 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,437,500...161,441,234
Ensembl chr 3:140,977,489...140,980,893
JBrowse link
G Defb27 defensin beta 27 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,525,407...161,530,485
Ensembl chr 3:141,065,135...141,068,767
JBrowse link
G Defb28 defensin beta 28 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,448,316...161,454,051
Ensembl chr 3:140,988,032...140,991,015
JBrowse link
G Defb29 defensin beta 29 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,464,380...161,472,484
Ensembl chr 3:141,004,098...141,005,557
JBrowse link
G Defb30 defensin beta 30 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:41,470,697...41,474,458
Ensembl chr15:37,296,602...37,298,479
JBrowse link
G Defb34 defensin beta 34 involved_in ISO (PMID:24189797) RGD PMID:24189797 NCBI chr16:77,422,703...77,425,557
Ensembl chr16:70,720,500...70,723,098
JBrowse link
G Defb36 defensin beta 36 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:161,538,276...161,547,107
Ensembl chr 3:141,086,058...141,086,728
JBrowse link
G Defb43 defensin beta 43 involved_in IEA
ISO
GO_REF:0000002
(PMID:26649771)
InterPro
RGD
PMID:26649771 GO_REF:0000002 NCBI chr15:41,447,875...41,452,769
Ensembl chr15:37,272,008...37,276,626
JBrowse link
G Defb49 defensin beta 49 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:28,329,236...28,333,898
Ensembl chr 9:20,832,686...20,837,352
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Ecsit ECSIT signaling integrator involved_in IEA
IBA
GO_REF:0000043
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000043 NCBI chr 8:28,881,594...28,894,443
Ensembl chr 8:20,605,583...20,618,390
JBrowse link
G Eif4ebp3 eukaryotic translation initiation factor 4E binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,540,324...28,542,070
Ensembl chr18:28,162,311...28,268,024
JBrowse link
G ENSRNOG00000063632 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr10:100,935,824...100,936,291 JBrowse link
G ENSRNOG00000067088 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr18:78,340,741...78,341,528 JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:26764600) RGD PMID:26764600 NCBI chr18:73,679,106...73,776,694
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:28,507,003...28,519,954
Ensembl chr 2:26,772,278...26,785,226
JBrowse link
G Fadd Fas associated via death domain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:209,169,245...209,175,423
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Fbxo9 f-box protein 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19805818)
Ensembl
RGD
PMID:19805818 GO_REF:0000107 NCBI chr 8:87,838,787...87,864,362
Ensembl chr 8:78,958,483...78,983,949
JBrowse link
G Fcer1g Fc epsilon receptor Ig involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000043
MGI:2384004 (PMID:23602766)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:23602766 GO_REF:0000033 GO_REF:0000043 NCBI chr13:86,181,908...86,186,766
Ensembl chr13:83,649,449...83,671,443
JBrowse link
G Fcnb ficolin B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:31,791,750...31,800,188
Ensembl chr 3:11,393,739...11,402,151
JBrowse link
G Fga fibrinogen alpha chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:170,672,169...170,679,572
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Fgb fibrinogen beta chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:170,693,966...170,700,875
Ensembl chr 2:168,394,916...168,405,979
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:150,473,767...150,503,524
Ensembl chr 5:145,189,841...145,217,326
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:30181393)
Ensembl
RGD
PMID:30181393 GO_REF:0000107 NCBI chr 6:30,017,952...30,039,269
Ensembl chr 6:24,300,956...24,320,034
JBrowse link
G Garin5a golgi associated RAB2 interactor 5A involved_in ISO (PMID:28930687) RGD PMID:28930687 NCBI chr 1:104,125,477...104,130,543
Ensembl chr 1:94,988,613...94,993,539
JBrowse link
G Gbp1 guanylate binding protein 1 involved_in ISO (PMID:29144452) RGD PMID:29144452 NCBI chr 2:234,071,366...234,106,012
Ensembl chr 2:231,398,163...231,432,131
Ensembl chr 2:231,398,163...231,432,131
JBrowse link
G Gp2 glycoprotein 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:183,228,395...183,243,954
Ensembl chr 1:173,797,057...173,812,619
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Gzmm granzyme M involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:10,661,683...10,667,448
Ensembl chr 7:10,011,066...10,016,665
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:31,383,801...31,415,334
Ensembl chr10:30,882,606...30,909,137
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:162,031,833...162,074,933
Ensembl chr 3:141,571,587...141,614,693
JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:88,562,889...88,565,001
Ensembl chr10:88,062,803...88,066,189
JBrowse link
G Hk1 hexokinase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:30,773,222...30,874,814
Ensembl chr20:30,230,486...30,332,131
JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565
JBrowse link
G Hmgb1-ps34 high mobility group box 1, pseudogene 34 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:75,429,080...75,430,340
Ensembl chr  X:71,363,531...71,364,790
JBrowse link
G Hmgb1l1 high mobility group box 1 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:88,942,974...88,944,444
Ensembl chr 1:79,815,269...79,816,511
Ensembl chr19:79,815,269...79,816,511
JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:112,467,960...112,469,220
Ensembl chr  X:107,671,272...107,672,535
JBrowse link
G Hmgb1l3 high mobility group box 1 like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:163,238,867...163,253,134 JBrowse link
G Hmgb1l5 high mobility group box 1 like 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:40,269,191...40,270,053
Ensembl chr10:39,768,658...39,769,293
Ensembl chr19:39,768,658...39,769,293
JBrowse link
G Hmgb2 high mobility group box 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140
Ensembl chr 1:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:60,721,545...60,722,608
Ensembl chr11:47,252,569...47,253,669
Ensembl chr 1:47,252,569...47,253,669
JBrowse link
G Hmgb2l2 high mobility group box 2 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:73,258,013...73,258,780
Ensembl chr14:69,045,641...69,046,640
Ensembl chr 1:69,045,641...69,046,640
JBrowse link
G Hmgb3 high mobility group box 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:154,341,106...154,346,087
Ensembl chr  X:149,296,375...149,301,292
JBrowse link
G Hmgb3l1 high mobility group box 3 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:53,362,550...53,363,341
Ensembl chr14:49,149,580...49,150,176
JBrowse link
G Ifgga2l1 interferon-gamma-inducible GTPase 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:56,031,907...56,040,627
Ensembl chr18:53,748,631...53,772,834
JBrowse link
G Ifgga2l2 interferon-gamma-inducible GTPase 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:56,141,281...56,160,578
Ensembl chr18:53,870,795...53,892,024
JBrowse link
G Ifgga4l interferon-gamma-inducible GTPase 4 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:56,108,872...56,125,302
Ensembl chr18:53,851,449...53,852,696
JBrowse link
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27194766) RGD PMID:27194766 NCBI chr 6:128,355,312...128,361,783
Ensembl chr 6:122,590,472...122,779,294
JBrowse link
G Ifi35 interferon-induced protein 35 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,881,270...86,889,523
Ensembl chr10:86,381,010...86,389,952
JBrowse link
G Ifi47 interferon gamma inducible protein 47 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,798,744...33,806,374
Ensembl chr10:33,285,450...33,306,216
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in ISO (PMID:17942531) RGD PMID:17942531 NCBI chr 3:67,635,924...67,683,968
Ensembl chr 3:47,227,364...47,275,456
JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:7813427) RGD PMID:7813427 NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:103,020,969...103,021,523
JBrowse link
G Ifnl1 interferon, lambda 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:92,926,184...92,927,830
Ensembl chr 1:83,798,703...83,800,235
JBrowse link
G Ifnl3 interferon, lambda 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:92,941,988...92,943,628
Ensembl chr 1:83,814,564...83,816,096
JBrowse link
G Ighm immunoglobulin heavy constant epsilon involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 6:132,329,269...133,053,426 JBrowse link
G Igtp interferon gamma induced GTPase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:42,875,047...42,882,866
Ensembl chr10:42,357,400...42,408,247
JBrowse link
G Il17a interleukin 17A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:23,144,402...23,147,889
JBrowse link
G Il17f interleukin 17F involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:30,686,532...30,697,918
Ensembl chr 9:23,190,100...23,201,482
JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:1,306,320...1,308,434
Ensembl chr 7:721,809...723,923
JBrowse link
G Il34 interleukin 34 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:55,624,368...55,690,576
Ensembl chr19:38,714,991...38,764,000
JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) RGD PMID:28436939 NCBI chr13:50,218,149...50,238,430
Ensembl chr13:47,666,447...47,686,729
JBrowse link
G Ipo7 importin 7 acts_upstream_of_or_within ISO (PMID:19805818) RGD PMID:19805818 NCBI chr 1:173,497,472...173,537,707
Ensembl chr 1:164,062,702...164,102,938
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in ISO
IBA
(PMID:16831874)
GO_REF:0000033
RGD
GO_Central
PMID:16831874 GO_REF:0000033 NCBI chr  X:156,919,927...156,929,825
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irak4 interleukin-1 receptor-associated kinase 4 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:127,561,777...127,588,762
Ensembl chr 7:125,682,488...125,717,837
JBrowse link
G Irf5 interferon regulatory factor 5 involved_in ISO (PMID:15665823) RGD PMID:15665823 NCBI chr 4:59,092,914...59,104,596
Ensembl chr 4:58,127,640...58,139,267
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO
IBA
ISS
(PMID:16888103)
(PMID:19620982)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:16888103 PMID:19620982 GO_REF:0000024 GO_REF:0000033 NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in ISO (PMID:28724761) RGD PMID:28724761 NCBI chr 5:172,066,369...172,067,656
Ensembl chr 5:166,784,148...166,785,435
JBrowse link
G Jak3 Janus kinase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,386,405...18,398,536
JBrowse link
G Jchain joining chain of multimeric IgA and IgM involved_in ISO (PMID:21786026) RGD PMID:21786026 NCBI chr14:19,822,976...19,831,072
Ensembl chr14:19,538,952...19,546,298
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Klrg1 killer cell lectin like receptor G1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:157,127,571...157,139,372
Ensembl chr 4:155,455,495...155,467,424
JBrowse link
G Klrk1 killer cell lectin like receptor K1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:164,767,377...164,778,453
Ensembl chr 4:163,081,927...163,092,459
JBrowse link
G Krt16 keratin 16 involved_in ISO (PMID:24218583) RGD PMID:24218583 NCBI chr10:85,669,276...85,672,211
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Lag3 lymphocyte activating 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:159,398,930...159,407,001
Ensembl chr 4:157,712,667...157,720,404
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA
ISO
IBA
GO_REF:0000104
(PMID:12932360)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:12932360 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Lcn2 lipocalin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16446425)
UniProt
RGD
PMID:16446425 GO_REF:0000024 NCBI chr 3:36,078,432...36,081,851
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Lgals3 galectin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:23,099,795...23,111,731
Ensembl chr15:20,607,692...20,632,025
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:96,447,858...96,548,899
JBrowse link
G LOC108349532 high mobility group protein B1 pseudogene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:172,484,907...172,486,209
Ensembl chr 1:163,050,070...163,051,381
Ensembl chr 1:163,050,070...163,051,381
JBrowse link
G LOC108350839 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:92,636,679...92,646,909
Ensembl chr10:100,935,824...100,936,291
JBrowse link
G LOC134478941 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:37,705,069...37,706,161 JBrowse link
G LOC134483037 interferon-inducible GTPase 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:55,993,009...55,995,850 JBrowse link
G LOC134483981 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:232,223,702...232,226,269
Ensembl chr 1:222,796,915...222,798,193
JBrowse link
G LOC134485624 high mobility group protein B1-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:152,634,059...152,634,929 JBrowse link
G Lrrd1 leucine-rich repeats and death domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:31,219,573...31,247,702
Ensembl chr 4:30,264,862...30,293,173
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:9596699) RGD PMID:9596699 NCBI chr 8:119,878,344...119,901,189
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Ly86 lymphocyte antigen 86 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:27,621,313...27,705,336
Ensembl chr17:27,415,830...27,487,260
JBrowse link
G Ly96 lymphocyte antigen 96 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Lyar Ly1 antibody reactive involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:76,789,193...76,802,973
Ensembl chr14:72,576,879...72,590,612
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
G Malt1 MALT1 paracaspase involved_in IBA
ISO
GO_REF:0000033
(PMID:16831874)
GO_Central
RGD
PMID:16831874 GO_REF:0000033 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260
JBrowse link
G Masp1 MBL associated serine protease 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:90,839,081...90,909,922
Ensembl chr11:77,334,859...77,402,974
JBrowse link
G Masp2 MBL associated serine protease 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:164,319,017...164,332,686
Ensembl chr 5:159,035,911...159,049,580
JBrowse link
G Matr3 matrin 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:27,428,190...27,474,421
Ensembl chr18:27,163,714...27,193,166
JBrowse link
G Matr3-ps2 matrin 3, pseudogene 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:80,290,405...80,293,970 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in
acts_upstream_of_positive_effect
ISO
ISS
(PMID:19609254), (PMID:19631370)
(PMID:23951545)
GO_REF:0000024
RGD
UniProt
PMID:19609254 PMID:19631370 PMID:23951545 GO_REF:0000024 NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:12,288,514...12,303,337
Ensembl chr10:11,787,422...11,796,973
JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO
IBA
(PMID:28471450), (PMID:28609714)
GO_REF:0000033
(PMID:26599367)
RGD
GO_Central
PMID:26599367 PMID:28471450 PMID:28609714 GO_REF:0000033 NCBI chr16:63,248,833...63,336,441
Ensembl chr16:56,546,207...56,633,743
JBrowse link
G Mfrp membrane frizzled-related protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:53,342,483...53,347,696
Ensembl chr 8:44,445,697...44,450,859
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:109,143,057...109,245,257
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Mif macrophage migration inhibitory factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:12,767,138...12,791,222
Ensembl chr20:12,790,902...12,799,504
Ensembl chr 4:12,790,902...12,799,504
JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:19333922) RGD PMID:19333922 NCBI chr10:28,349,996...28,350,090
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:12,925,267...12,938,828
Ensembl chr 8:4,640,416...4,653,961
JBrowse link
G Mpeg1 macrophage expressed 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:218,876,848...218,881,364
Ensembl chr 1:209,452,133...209,458,855
JBrowse link
G Mptx1 mucosal pentraxin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:88,260,335...88,263,869
Ensembl chr13:85,728,076...85,731,469
JBrowse link
G Mr1 major histocompatibility complex, class I-related involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:69,850,420...69,868,302
Ensembl chr13:67,299,585...67,317,970
JBrowse link
G Msrb1 methionine sulfoxide reductase B1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:23911929)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23911929 GO_REF:0000024 GO_REF:0000107 NCBI chr10:14,269,414...14,275,140
Ensembl chr10:13,764,883...13,770,609
JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:25512380) RGD PMID:25512380 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053
JBrowse link
G Mx1 MX dynamin like GTPase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:50,269,056...50,294,699
Ensembl chr11:36,799,660...36,823,507
JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:50,375,101...50,399,373
Ensembl chr11:36,906,111...36,930,342
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in IBA
IEA
GO_REF:0000033
GO_REF:0000043
GO_Central
UniProt
GO_REF:0000033 GO_REF:0000043 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:36,396,082...36,446,835
Ensembl chr19:20,222,776...20,273,570
JBrowse link
G N4bp3 Nedd4 binding protein 3 acts_upstream_of_positive_effect ISO (PMID:23951545) RGD PMID:23951545 NCBI chr10:36,400,053...36,407,609
Ensembl chr10:35,899,096...35,907,001
JBrowse link
G Nagk N-acetylglucosamine kinase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:117,838,761...117,846,304
Ensembl chr 4:116,281,328...116,313,137
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO MGI:3793713 (PMID:25652399) RGD PMID:25652399 NCBI chr 2:47,684,420...47,794,914
Ensembl chr 2:45,951,313...46,061,846
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_positive_effect
involved_in
ISO
IEA
(PMID:23951545)
GO_REF:0000107
RGD
Ensembl
PMID:23951545 GO_REF:0000107 NCBI chr 8:82,264,751...82,349,642
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Neurl3 neuralized E3 ubiquitin protein ligase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:45,990,373...45,998,470
Ensembl chr 9:38,494,489...38,502,649
JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:26,743,658...26,771,783
Ensembl chr 6:20,995,266...21,018,248
JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 involved_in ISO (PMID:20434986) RGD PMID:20434986 NCBI chr19:10,483,601...10,587,223
Ensembl chr19:10,477,628...10,562,121
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:56,277,134...56,332,229
Ensembl chr10:55,778,560...55,825,180
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:56,336,957...56,412,796
Ensembl chr10:55,843,001...55,912,774
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,328,566...44,352,811
JBrowse link
G Nlrp9 NLR family, pyrin domain containing 9 involved_in ISO (PMID:28636595) RGD PMID:28636595 NCBI chr 1:77,320,034...77,370,366
Ensembl chr 1:68,291,180...68,341,512
JBrowse link
G Nlrx1 NLR family member X1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:53,486,866...53,503,498
Ensembl chr 8:44,590,048...44,606,484
JBrowse link
G Nmi N-myc (and STAT) interactor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:56,824,778...56,848,891
Ensembl chr 3:36,415,607...36,439,498
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:85,391,142...85,442,281
Ensembl chr 4:84,060,880...84,111,404
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:23806334) RGD PMID:23806334 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:70,594,116...70,611,976
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Np4 defensin NP-4 precursor involved_in ISO (PMID:2500436) RGD PMID:2500436 NCBI chr16:77,197,061...77,199,713
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:80,212,111...80,219,310
Ensembl chr 4:78,881,264...78,888,495
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in ISO MGI:2388490 (PMID:29934320) RGD PMID:29934320 NCBI chr19:52,205,374...52,220,267
Ensembl chr19:35,295,573...35,310,557
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nrros negative regulator of reactive oxygen species NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:29909984)
UniProt
RGD
PMID:29909984 GO_REF:0000024 NCBI chr11:82,133,608...82,151,160
Ensembl chr11:68,628,712...68,646,142
JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,330,423...41,341,130
Ensembl chr12:35,669,801...35,680,517
JBrowse link
G Oas1f 2 ' -5 ' oligoadenylate synthetase 1F involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,357,647...41,367,123
Ensembl chr12:35,697,015...35,706,323
JBrowse link
G Oas1k 2 ' -5 ' oligoadenylate synthetase 1K involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,423,100...41,432,330
Ensembl chr12:35,762,468...35,771,710
JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,464,568...41,492,036
Ensembl chr12:35,806,759...35,829,371
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:41,439,645...41,463,392
Ensembl chr12:35,779,022...35,802,781
JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:47,369,829...47,383,337
Ensembl chr12:41,709,435...41,722,547
JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in ISO
IBA
(PMID:23806334), (PMID:26997266)
GO_REF:0000033
RGD
GO_Central
PMID:23806334 PMID:26997266 GO_REF:0000033 NCBI chr 2:80,021,381...80,046,898
Ensembl chr 2:78,290,959...78,316,422
JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:158,324,417...158,357,466
Ensembl chr 5:153,041,352...153,074,362
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Pfpl pore forming protein-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:218,836,737...218,840,017
Ensembl chr 1:209,412,515...209,414,608
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:87,659,863...87,665,048
Ensembl chr 1:78,531,815...78,537,001
JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28471450)
UniProt
RGD
PMID:28471450 GO_REF:0000024 NCBI chr 9:111,403,624...111,453,703
Ensembl chr 9:103,956,678...104,006,783
JBrowse link
G Plpp6 phospholipid phosphatase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:236,092,642...236,095,494
Ensembl chr 1:226,679,100...226,681,949
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Polr3a RNA polymerase III subunit A involved_in ISO (PMID:19609254) RGD PMID:19609254 NCBI chr16:56,066...95,060
Ensembl chr16:49,521...88,172
JBrowse link
G Polr3c RNA polymerase III subunit C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:186,935,038...186,950,962
Ensembl chr 2:184,246,204...184,262,208
JBrowse link
G Ppp1r14b protein phosphatase 1, regulatory (inhibitor) subunit 14B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:213,594,416...213,596,527
Ensembl chr 1:204,163,299...204,167,319
Ensembl chr12:204,163,299...204,167,319
JBrowse link
G Ppp1r14bl1 protein phosphatase 1, regulatory (inhibitor) subunit 14B like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:20,036,697...20,037,293
Ensembl chr12:15,974,864...15,975,648
JBrowse link
G Ppp6c protein phosphatase 6, catalytic subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:43,339,521...43,371,807
Ensembl chr 3:22,931,577...22,962,113
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:17,275,445...17,280,018
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Prkd1 protein kinase D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:73,460,640...73,774,433
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Pspc1 paraspeckle component 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:34,941,445...35,027,460
Ensembl chr15:30,828,626...30,911,202
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO
IBA
(PMID:23544079)
GO_REF:0000033
RGD
GO_Central
PMID:23544079 GO_REF:0000033 NCBI chr 2:152,797,563...152,803,372
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rab2b RAB2B, member RAS oncogene family involved_in ISO (PMID:28930687) RGD PMID:28930687 NCBI chr15:27,441,860...27,462,479
Ensembl chr15:24,968,803...24,989,113
JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO
IBA
(PMID:23527010)
GO_REF:0000033
RGD
GO_Central
PMID:23527010 GO_REF:0000033 NCBI chr 4:78,853,450...78,856,652
Ensembl chr 4:77,522,535...77,525,556
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 acts_upstream_of_or_within ISO (PMID:26764600) RGD PMID:26764600 NCBI chr 5:17,948,522...18,012,434
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Rel REL proto-oncogene, NF-kB subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:101,891,238...101,922,324
Ensembl chr14:97,695,161...97,720,892
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:88,385,717...88,413,380
Ensembl chr 1:79,257,725...79,285,507
JBrowse link
G Rfpl4a ret finger protein-like 4A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:77,757,811...77,764,270
Ensembl chr 1:68,728,964...68,735,423
JBrowse link
G RGD1309362 similar to interferon-inducible GTPase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:55,943,741...55,969,375 JBrowse link
G RGD1559575 similar to novel protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,752,208...33,777,536
Ensembl chr10:33,252,134...33,276,225
JBrowse link
G Rhot1 ras homolog family member T1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:65,685,687...65,760,682
Ensembl chr10:65,170,560...65,262,804
JBrowse link
G Rig1 RNA sensor RIG-1 involved_in ISO (PMID:19609254), (PMID:19631370)
(PMID:17942531)
RGD PMID:17942531 PMID:19609254 PMID:19631370 NCBI chr 5:60,117,398...60,165,995
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Riok3 RIO kinase 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr18:3,602,535...3,628,108
Ensembl chr18:3,327,776...3,353,343
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 involved_in ISO
IBA
(PMID:23806334)
(PMID:21469090)
GO_REF:0000033
RGD
GO_Central
PMID:21469090 PMID:23806334 GO_REF:0000033 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Rnase3 ribonuclease A family member 3 involved_in ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:26,985,399...26,986,269
Ensembl chr15:24,511,891...24,512,790
JBrowse link
G Rnase6 ribonuclease A family member 6 involved_in ISO
IBA
(PMID:25075772)
GO_REF:0000033
RGD
GO_Central
PMID:25075772 GO_REF:0000033 NCBI chr15:26,827,896...26,830,807
Ensembl chr15:24,354,303...24,357,328
JBrowse link
G Rnf135 ring finger protein 135 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:65,668,441...65,687,671
Ensembl chr10:65,170,560...65,262,804
JBrowse link
G Rnf166 ring finger protein 166 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:67,437,974...67,447,814
Ensembl chr19:50,529,434...50,539,274
JBrowse link
G Rnf170 ring finger protein 170 acts_upstream_of_or_within ISO (PMID:31076723) RGD PMID:31076723 NCBI chr16:72,631,638...72,656,893
Ensembl chr16:65,928,895...65,954,083
JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:82,516,153...82,554,199
Ensembl chr14:78,292,516...78,329,864
JBrowse link
G Rnf39 ring finger protein 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,610,027...1,615,516
Ensembl chr20:1,604,794...1,610,283
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699
JBrowse link
G S100a8 S100 calcium binding protein A8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,464,095...178,465,223
Ensembl chr 2:176,167,124...176,167,643
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:178,487,941...178,490,622
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:63,867,503...63,890,872
Ensembl chr10:63,369,456...63,392,822
JBrowse link
G Sdhaf4 succinate dehydrogenase complex assembly factor 4 acts_upstream_of_or_within ISO (PMID:19805818) RGD PMID:19805818 NCBI chr 9:33,904,667...33,912,813 JBrowse link
G Serinc5 serine incorporator 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:25,581,952...25,685,403
Ensembl chr 2:23,846,900...23,950,346
JBrowse link
G Serping1 serpin family G member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:90,249,410...90,259,299
Ensembl chr 3:69,842,739...69,852,034
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:144,621,678...144,637,930
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sftpd surfactant protein D involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:17,080,575...17,093,047
Ensembl chr16:17,046,483...17,059,927
JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO (PMID:27194766) RGD PMID:27194766 NCBI chr 2:59,888,406...59,916,471
Ensembl chr 2:58,161,229...58,189,338
JBrowse link
G Slc15a3 solute carrier family 15 member 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:216,906,836...216,932,046
Ensembl chr 1:207,492,365...207,507,157
JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:34,684,583...34,718,429
Ensembl chr12:29,063,015...29,082,480
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (PMID:18322212) RGD PMID:18322212 NCBI chr 3:173,501,573...173,503,822
Ensembl chr 3:153,082,369...153,084,453
JBrowse link
G Slpi-ps1 secretory leukocyte peptidase inhibitor, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,438,485...173,440,746
Ensembl chr 3:153,019,109...153,021,360
Ensembl chr 3:153,019,109...153,021,360
JBrowse link
G Slpi-ps2 secretory leukocyte peptidase inhibitor, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,476,856...173,478,797
Ensembl chr 3:153,019,114...153,059,479
Ensembl chr 3:153,019,114...153,059,479
JBrowse link
G Sp110 SP110 nuclear body protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:93,648,574...93,673,476
Ensembl chr 9:86,200,503...86,222,670
JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (PMID:14691481) RGD PMID:14691481 NCBI chr14:81,713,070...81,742,510
Ensembl chr14:77,511,901...77,517,996
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:19433799), (PMID:19776740), (PMID:23910378)
GO_REF:0000033
(PMID:19433799), (PMID:21074459), (PMID:23910378), (PMID:25254379)
UniProt
RGD
GO_Central
PMID:19433799 PMID:19776740 PMID:21074459 PMID:23910378 PMID:25254379 GO_REF:0000024 GO_REF:0000033 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15845454)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15845454 GO_REF:0000024 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:36,645,344...36,653,548
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:25636800) RGD PMID:25636800 NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tbkbp1 TBK1 binding protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:82,616,978...82,632,169
Ensembl chr10:82,120,564...82,134,352
JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,102,366...1,123,147
JBrowse link
G Ticam2 TIR domain containing adaptor molecule 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:41,481,057...41,498,065
Ensembl chr18:39,294,453...39,311,462
JBrowse link
G Tifa TRAF-interacting protein with forkhead-associated domain involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000043
(PMID:26068852), (PMID:28222186), (PMID:28877472), (PMID:30111836)
UniProt
GO_Central
RGD
PMID:26068852 PMID:28222186 PMID:28877472 PMID:30111836 GO_REF:0000024 GO_REF:0000033 GO_REF:0000043 NCBI chr 2:218,927,724...218,942,111
Ensembl chr 2:216,234,774...216,267,841
JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Tlr1 toll-like receptor 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:43,737,761...43,750,389
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr10 toll-like receptor 10 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:43,758,940...43,768,352
Ensembl chr14:43,406,217...43,413,917
JBrowse link
G Tlr11 toll-like receptor 11 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:26,018,987...26,023,426
Ensembl chr15:23,545,408...23,549,849
JBrowse link
G Tlr12 toll-like receptor 12 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:146,245,559...146,248,564
Ensembl chr 5:140,959,996...140,964,816
JBrowse link
G Tlr13 toll-like receptor 13 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:75,285,832...75,307,935
Ensembl chr  X:71,220,367...71,242,376
JBrowse link
G Tlr5 toll-like receptor 5 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:97,166,430...97,190,642
Ensembl chr13:94,634,801...94,657,738
JBrowse link
G Tlr6 toll-like receptor 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:43,715,809...43,727,019
Ensembl chr14:43,362,164...43,375,685
JBrowse link
G Tlr7 toll-like receptor 7 involved_in ISO (PMID:35477763) RGD PMID:35477763 NCBI chr  X:30,644,324...30,670,796
Ensembl chr  X:27,027,425...27,054,754
JBrowse link
G Tlr8 toll-like receptor 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:30,708,714...30,733,104
Ensembl chr  X:27,091,778...27,116,549
JBrowse link
G Tlr9 toll-like receptor 9 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tmem106a transmembrane protein 106A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:87,007,144...87,016,161
Ensembl chr10:86,506,936...86,515,892
JBrowse link
G Tmem33 transmembrane protein 33 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:41,242,358...41,264,586
Ensembl chr14:40,885,712...40,910,715
JBrowse link
G Tmem43 transmembrane protein 43 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:125,534,844...125,549,986
Ensembl chr 4:123,977,625...123,992,825
JBrowse link
G Tmem45b transmembrane protein 45b involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:38,123,423...38,168,599
Ensembl chr 8:29,865,278...29,910,453
JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,399,442...185,415,798
Ensembl chr 2:182,709,378...182,726,760
JBrowse link
G Tollip toll interacting protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:206,391,120...206,413,809
Ensembl chr 1:196,950,771...196,983,625
JBrowse link
G Traf2 Tnf receptor-associated factor 2 acts_upstream_of_positive_effect ISO (PMID:23951545) RGD PMID:23951545 NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:8,341,951...8,366,538
JBrowse link
G Traf3 Tnf receptor-associated factor 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:136,025,097...136,128,363
Ensembl chr 6:130,206,484...130,305,481
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:20,259,227...20,276,879
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO MGI:3052754 (PMID:23160154) RGD PMID:23160154 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Tril TLR4 interactor with leucine-rich repeats involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:84,252,781...84,257,626
Ensembl chr 4:82,922,328...82,927,172
JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr20:1,694,771...1,703,724
Ensembl chr20:1,689,562...1,698,252
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr10:44,255,019...44,270,711
Ensembl chr10:43,758,354...43,771,138
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO
IBA
IEA
(PMID:18248090)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:18248090 GO_REF:0000033 GO_REF:0000107 NCBI chr15:39,909,587...39,948,719
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr 5:65,596,149...65,620,434
Ensembl chr 5:60,800,032...60,824,858
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:1,703,723...1,715,465
Ensembl chr20:1,700,905...1,710,249
JBrowse link
G Trim17 tripartite motif-containing 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:44,242,688...44,250,504
Ensembl chr10:43,740,604...43,750,919
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr 1:166,376,829...166,399,441
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:74,310,024...74,328,473
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr20:1,711,564...1,736,389
Ensembl chr20:1,709,788...1,731,120
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr17:48,233,999...48,246,348
Ensembl chr17:43,538,285...43,550,643
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:18248090)
MGI:2143362 (PMID:19270682)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 PMID:19270682 GO_REF:0000033 NCBI chr 1:82,724,842...82,731,566
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:168,174,528...168,200,343
Ensembl chr 1:158,765,969...158,787,183
JBrowse link
G Trim30d tripartite motif-containing 30D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:168,207,166...168,225,780
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr20:1,658,386...1,671,711
Ensembl chr20:1,653,165...1,666,494
JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 5:84,020,604...84,031,483
Ensembl chr 5:78,999,389...79,022,018
JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:168,119,043...168,130,544
Ensembl chr 1:158,707,172...158,718,674
JBrowse link
G Trim35 tripartite motif-containing 35 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000033
(PMID:18248090)
Ensembl
GO_Central
RGD
PMID:18248090 GO_REF:0000033 GO_REF:0000107 NCBI chr15:44,669,222...44,685,766
Ensembl chr15:40,493,755...40,510,240
JBrowse link
G Trim39 tripartite motif-containing 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,008,528...2,022,383
Ensembl chr20:1,983,533...2,020,117
JBrowse link
G Trim40 tripartite motif-containing 40 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:1,680,554...1,691,123
Ensembl chr20:1,676,270...1,685,214
JBrowse link
G Trim41 tripartite motif-containing 41 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,676,348...33,687,432
Ensembl chr10:33,175,213...33,186,694
JBrowse link
G Trim43a tripartite motif-containing 43A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:98,425,912...98,478,569
Ensembl chr 8:89,562,568...89,568,716
JBrowse link
G Trim44 tripartite motif-containing 44 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,048,643...109,183,821
Ensembl chr 3:88,592,719...88,729,188
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr 1:168,132,277...168,149,263
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim50 tripartite motif-containing 50 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:26,937,349...26,954,286
Ensembl chr12:21,300,785...21,317,668
JBrowse link
G Trim54 tripartite motif-containing 54 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:30,959,306...30,978,475
Ensembl chr 6:25,239,340...25,258,511
JBrowse link
G Trim55 tripartite motif-containing 55 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:104,016,361...104,058,302
Ensembl chr 2:102,088,443...102,142,168
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr12:25,193,224...25,204,032
Ensembl chr12:19,551,521...19,567,462
JBrowse link
G Trim58 tripartite motif-containing 58 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:43,523,341...43,536,435
Ensembl chr10:43,022,996...43,034,476
JBrowse link
G Trim59 tripartite motif-containing 59 involved_in IBA
ISO
GO_REF:0000033
(PMID:18248090)
GO_Central
RGD
PMID:18248090 GO_REF:0000033 NCBI chr 2:155,579,183...155,593,450
Ensembl chr 2:153,268,584...153,281,031
JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:168,095,619...168,108,809
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Trim62 tripartite motif-containing 62 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr 5:146,516,349...146,545,015
Ensembl chr 5:141,231,523...141,259,915
JBrowse link
G Trim63 tripartite motif containing 63 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:151,817,209...151,831,026
Ensembl chr 5:146,533,507...146,547,322
JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:166,525,981...166,539,407
Ensembl chr 1:157,114,044...157,127,477
JBrowse link
G Trim69 tripartite motif-containing 69 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:129,565,060...129,585,629
Ensembl chr 3:109,111,468...109,132,037
JBrowse link
G Trim7 tripartite motif-containing 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:33,706,614...33,722,609
Ensembl chr10:33,205,491...33,221,468
JBrowse link
G Trim72 tripartite motif containing 72 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:192,044,220...192,052,080
Ensembl chr 1:182,613,712...182,621,606
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:255,311,039...255,325,937
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
G Trim80 tripartite motif protein 80 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:101,181,797...101,190,122
Ensembl chr10:100,682,830...100,691,151
JBrowse link
G Triml1 tripartite motif family-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:55,727,383...55,737,770
Ensembl chr16:48,997,252...49,005,417
JBrowse link
G Triml2 tripartite motif family-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:55,677,142...55,693,379
Ensembl chr16:48,944,838...48,955,453
JBrowse link
G Ttc4 tetratricopeptide repeat domain 4 involved_in ISO (PMID:29251827) RGD PMID:29251827 NCBI chr 5:126,673,535...126,691,203
Ensembl chr 5:121,445,740...121,462,287
JBrowse link
G Uba7 ubiquitin-like modifier activating enzyme 7 involved_in ISO
IBA
(PMID:28724761)
GO_REF:0000033
RGD
GO_Central
PMID:28724761 GO_REF:0000033 NCBI chr 8:117,543,902...117,552,709
Ensembl chr 8:108,665,292...108,674,099
JBrowse link
G Ube2l6 ubiquitin-conjugating enzyme E2L 6 involved_in ISO (PMID:28724761) RGD PMID:28724761 NCBI chr 3:90,279,705...90,294,721
Ensembl chr 3:69,873,424...69,888,048
JBrowse link
G Umod uromodulin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:183,247,676...183,261,665
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:44,470,232...44,478,561
Ensembl chr 1:42,065,120...42,073,216
JBrowse link
G Vnn1 vanin 1 involved_in ISO (PMID:14966568) RGD PMID:14966568 NCBI chr 1:23,356,324...23,366,629
Ensembl chr 1:21,537,094...21,547,395
JBrowse link
G Wap whey acidic protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:85,717,038...85,719,159
Ensembl chr14:81,503,123...81,505,219
JBrowse link
G Wfdc10a WAP four-disulfide core domain 10A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,809,395...173,810,748
Ensembl chr 3:153,390,067...153,391,420
JBrowse link
G Wfdc12 WAP four-disulfide core domain 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,280,844...173,282,167
Ensembl chr 3:152,862,341...152,862,690
JBrowse link
G Wfdc13 WAP four-disulfide core domain 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,838,906...173,840,641
Ensembl chr 3:153,419,648...153,421,221
JBrowse link
G Wfdc15b WAP four-disulfide core domain 15B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,308,835...173,318,772
Ensembl chr 3:152,890,216...152,896,900
JBrowse link
G Wfdc16 WAP four-disulfide core domain 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,786,248...173,789,418
Ensembl chr 3:153,366,976...153,370,056
JBrowse link
G Wfdc17 WAP four-disulfide core domain 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,059,451...69,060,298
Ensembl chr10:68,561,954...68,562,801
JBrowse link
G Wfdc18 WAP four-disulfide core domain 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,086,319...69,088,473
Ensembl chr10:68,588,818...68,589,671
JBrowse link
G Wfdc2 WAP four-disulfide core domain 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,706,091...173,735,055
Ensembl chr 3:153,286,131...153,292,807
JBrowse link
G Wfdc21 WAP four-disulfide core domain 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,125,336...69,131,205
Ensembl chr10:68,627,820...68,633,701
JBrowse link
G Wfdc3 WAP four-disulfide core domain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,884,206...173,898,294
Ensembl chr 3:153,464,862...153,478,952
JBrowse link
G Wfdc5 WAP four-disulfide core domain 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,268,410...173,274,253
Ensembl chr 3:152,849,025...152,854,904
JBrowse link
G Wfdc9 WAP four-disulfide core domain 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:173,799,888...173,808,383
Ensembl chr 3:153,380,649...153,391,261
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:31,830,159...31,850,408
Ensembl chr17:31,621,411...31,641,659
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:67,979,055...68,029,353
Ensembl chr 4:67,012,185...67,062,428
JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:151,105,303...151,143,843
Ensembl chr 5:145,831,446...145,859,993
JBrowse link
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:90,178,734...90,206,889
Ensembl chr 3:69,771,890...69,799,921
JBrowse link
activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aim2 absent in melanoma 2 involved_in ISO
IBA
(PMID:19158675), (PMID:19158676), (PMID:19158679)
(PMID:19158676)
GO_REF:0000033
RGD
GO_Central
PMID:19158675 PMID:19158676 PMID:19158679 GO_REF:0000033 NCBI chr13:88,397,516...88,439,325
Ensembl chr13:85,866,284...85,906,975
JBrowse link
G Casp6 caspase 6 involved_in ISO
IEA
ISS
(PMID:32298652)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:32298652 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:221,140,287...221,152,727
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA
(PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:29426904), (PMID:30007416), (PMID:32817552), (PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35438208)
(PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:29426904), (PMID:32911480), (PMID:32911481), (PMID:32913000)
GO_REF:0000033
RGD
GO_Central
PMID:23258413 PMID:23929945 PMID:24077100 PMID:26046437 PMID:28363908 More... GO_REF:0000033 NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496
JBrowse link
G ENSRNOG00000069878 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr13:85,977,035...85,994,718 JBrowse link
G Gbp1 guanylate binding protein 1 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:234,071,366...234,106,012
Ensembl chr 2:231,398,163...231,432,131
Ensembl chr 2:231,398,163...231,432,131
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:24739961)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24739961 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:234,005,727...234,021,812
Ensembl chr 2:231,332,284...231,348,571
JBrowse link
G Gbp4 guanylate binding protein 4 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:233,978,163...233,992,124
Ensembl chr 2:231,305,244...231,318,879
JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:233,910,999...233,930,320
Ensembl chr 2:231,237,748...231,257,061
JBrowse link
G Gbp7 guanylate binding protein 7 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:233,948,774...233,970,532
Ensembl chr 2:231,275,640...231,297,278
JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr10:88,562,889...88,565,001
Ensembl chr10:88,062,803...88,066,189
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:24971542) RGD PMID:24971542 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO
ISS
(PMID:20628368)
GO_REF:0000024
RGD
UniProt
PMID:20628368 GO_REF:0000024 NCBI chr 6:135,523,604...135,529,687
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Ifi214 interferon activated gene 214 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:88,472,400...88,483,335
Ensembl chr13:85,940,078...85,951,004
JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,264,404...45,290,737
Ensembl chr13:42,712,159...42,737,143
JBrowse link
G LOC102556096 pyrin domain-containing protein 3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:88,444,247...88,461,817
Ensembl chr13:85,912,044...85,929,007
JBrowse link
G Matr3 matrin 3 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr18:27,428,190...27,474,421
Ensembl chr18:27,163,714...27,193,166
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO
ISS
(PMID:18818105), (PMID:20628368)
GO_REF:0000024
RGD
UniProt
PMID:18818105 PMID:20628368 GO_REF:0000024 NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mnda myeloid cell nuclear differentiation antigen involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:88,550,224...88,567,892
Ensembl chr13:86,017,892...86,034,201
JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:16648852)
UniProt
RGD
PMID:16648852 GO_REF:0000024 NCBI chr 6:26,743,658...26,771,783
Ensembl chr 6:20,995,266...21,018,248
JBrowse link
G Nlrp10 NLR family, pyrin domain containing 10 involved_in ISO (PMID:22672233) RGD PMID:22672233 NCBI chr 1:172,357,648...172,365,205
Ensembl chr 1:162,922,806...162,930,363
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:56,277,134...56,332,229
Ensembl chr10:55,778,560...55,825,180
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:56,336,957...56,412,796
Ensembl chr10:55,843,001...55,912,774
JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr  X:70,594,116...70,611,976
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISO
ISS
(PMID:26046437)
GO_REF:0000024
RGD
UniProt
PMID:26046437 GO_REF:0000024 NCBI chr  X:17,275,445...17,280,018
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr15:34,941,445...35,027,460
Ensembl chr15:30,828,626...30,911,202
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO
IBA
(PMID:19158675)
GO_REF:0000033
RGD
GO_Central
PMID:19158675 GO_REF:0000033 NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 1:211,476,298...211,535,077
Ensembl chr 1:202,078,287...202,105,665
Ensembl chr 1:202,078,287...202,105,665
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 5:144,621,678...144,637,930
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) RGD PMID:22783022 NCBI chr 8:66,377,471...66,432,150
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IBA
(PMID:18818105), (PMID:23910378)
(PMID:21947006), (PMID:23258412), (PMID:23910378)
GO_REF:0000033
RGD
GO_Central
PMID:18818105 PMID:21947006 PMID:23258412 PMID:23910378 GO_REF:0000033 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:25636800)
GO_REF:0000033
MGI:3046789 (PMID:15661922)
RGD
GO_Central
PMID:15661922 PMID:25636800 GO_REF:0000033 NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within ISO MGI:1860885 (PMID:15661922) RGD PMID:15661922 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:25686612) RGD PMID:25686612 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20628368)
Ensembl
UniProt
RGD
PMID:20628368 GO_REF:0000024 GO_REF:0000107 NCBI chr11:56,847,837...56,886,302
Ensembl chr11:43,377,216...43,417,202
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:168,132,277...168,149,263
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 7:115,423,026...115,443,884
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:32200799), (PMID:32296175), (PMID:32350114), (PMID:33109609)
UniProt
RGD
PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 GO_REF:0000024 NCBI chr 3:182,411,665...182,427,604
Ensembl chr 3:161,993,351...162,003,870
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO
IBA
(PMID:30135424), (PMID:30193849)
GO_REF:0000033
RGD
GO_Central
PMID:30135424 PMID:30193849 GO_REF:0000033 NCBI chr 3:161,332,760...161,335,591
Ensembl chr 3:140,872,460...140,882,408
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in ISO (PMID:31685995) RGD PMID:31685995 NCBI chr 3:176,183,111...176,210,812
Ensembl chr 3:155,764,980...155,821,242
JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Defb44 defensin beta 44 involved_in ISO (PMID:34481960) RGD PMID:34481960 NCBI chr15:41,487,871...41,489,562
Ensembl chr15:37,312,308...37,313,370
JBrowse link
G Il33 interleukin 33 involved_in ISO
IEA
(PMID:26936882)
GO_REF:0000107
RGD
Ensembl
PMID:26936882 GO_REF:0000107 NCBI chr 1:237,115,478...237,149,897
Ensembl chr 1:227,721,435...227,736,373
JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:32935379)
UniProt
RGD
PMID:32935379 GO_REF:0000024 NCBI chr 7:15,183,931...15,209,988
Ensembl chr 7:14,481,761...14,507,794
JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:29471394) RGD PMID:29471394 NCBI chr 7:118,684,038...118,684,122
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mpeg1 macrophage expressed 1 involved_in
NOT|involved_in
ISS
ISO
GO_REF:0000024
(PMID:35471730)
(PMID:26402460)
UniProt
RGD
PMID:26402460 PMID:35471730 GO_REF:0000024 NCBI chr 1:218,876,848...218,881,364
Ensembl chr 1:209,452,133...209,458,855
JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:25512380) RGD PMID:25512380 NCBI chr 7:124,897,424...125,018,582
Ensembl chr 7:123,017,896...123,139,053
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20406817)
Ensembl
RGD
PMID:20406817 GO_REF:0000107 NCBI chr 2:226,689,745...226,805,897
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:20406817) RGD PMID:20406817 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Rasgrp4 RAS guanyl releasing protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:26982501)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26982501 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:93,560,513...93,580,321
Ensembl chr 1:84,433,064...84,451,896
JBrowse link
G Slc15a2 solute carrier family 15 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20406817)
Ensembl
RGD
PMID:20406817 GO_REF:0000107 NCBI chr11:77,519,565...77,548,609
Ensembl chr11:64,014,182...64,043,225
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:32753672), (PMID:35662396) RGD PMID:32753672 PMID:35662396 NCBI chr 9:20,696,440...20,752,265
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Umod uromodulin involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:32616672)
UniProt
Ensembl
RGD
PMID:32616672 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:183,247,676...183,261,665
Ensembl chr 1:173,816,339...173,830,302
JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO
GO_REF:0000024
(PMID:22265677)
UniProt
RGD
PMID:22265677 GO_REF:0000024 NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Card9 caspase recruitment domain family, member 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:22265677), (PMID:24470469), (PMID:25621893), (PMID:26679537), (PMID:29080677), (PMID:32358020), (PMID:33548172)
(PMID:24231284), (PMID:25057046), (PMID:25702837), (PMID:26488816), (PMID:26679537), (PMID:26961233), (PMID:29080677), (PMID:33548172), (PMID:33558980)
UniProt
RGD
PMID:22265677 PMID:24231284 PMID:24470469 PMID:25057046 PMID:25621893 More... GO_REF:0000024 NCBI chr 3:29,569,907...29,578,402
Ensembl chr 3:9,171,815...9,180,237
JBrowse link
G Clec4a C-type lectin domain family 4, member A involved_in IBA
ISO
GO_REF:0000033
(PMID:22041900), (PMID:32358020)
GO_Central
RGD
PMID:22041900 PMID:32358020 GO_REF:0000033 NCBI chr 4:158,026,138...158,119,904
Ensembl chr 4:156,414,688...156,432,402
JBrowse link
G Clec4a1 C-type lectin domain family 4, member A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,845,811...157,857,926
Ensembl chr 4:156,173,894...156,186,008
JBrowse link
G Clec4a2 C-type lectin domain family 4, member A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,934,342...157,993,595
Ensembl chr 4:156,262,692...156,321,392
JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:157,885,899...157,896,728
Ensembl chr 4:156,214,718...156,224,817
JBrowse link
G Clec4b2 C-type lectin domain family 4, member B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:158,148,434...158,171,933
Ensembl chr 4:156,462,742...156,486,240
JBrowse link
G Clec4d C-type lectin domain family 4, member D involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:23911656)
GO_REF:0000033
GO_REF:0000024
Ensembl
RGD
GO_Central
UniProt
PMID:23911656 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:158,275,287...158,286,978
Ensembl chr 4:156,589,792...156,598,848
JBrowse link
G Clec4e C-type lectin domain family 4, member E involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:18490740)
GO_REF:0000033
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:18490740 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:158,292,624...158,298,607
Ensembl chr 4:156,607,614...156,612,767
JBrowse link
G Clec6a-ps1 C-type lectin domain family 6, member A, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:158,225,100...158,244,722
Ensembl chr 4:156,539,408...156,558,605
Ensembl chr 4:156,539,408...156,558,605
JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:17159984), (PMID:19136564), (PMID:32358020) RGD PMID:17159984 PMID:19136564 PMID:32358020 NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:29326275)
UniProt
RGD
PMID:29326275 GO_REF:0000024 NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Defb4 defensin beta 4 involved_in ISO (PMID:30050988) RGD PMID:30050988 NCBI chr16:77,352,911...77,356,104
Ensembl chr16:70,650,472...70,653,665
JBrowse link
G Defb44 defensin beta 44 involved_in ISO (PMID:34481960) RGD PMID:34481960 NCBI chr15:41,487,871...41,489,562
Ensembl chr15:37,312,308...37,313,370
JBrowse link
G Defb5 defensin beta 5 involved_in ISO (PMID:30050988) RGD PMID:30050988 NCBI chr16:77,315,424...77,317,828
Ensembl chr16:70,613,146...70,615,467
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:22041900)
Ensembl
RGD
PMID:22041900 GO_REF:0000107 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:45,547,416...45,683,930
JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:31522117)
UniProt
Ensembl
RGD
PMID:31522117 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,118,232...74,151,366
Ensembl chr10:73,621,883...73,653,896
JBrowse link
G Atad3a ATPase family, AAA domain containing 3A involved_in ISO
ISS
(PMID:31522117)
GO_REF:0000024
RGD
UniProt
PMID:31522117 GO_REF:0000024 NCBI chr 5:171,632,545...171,652,725
Ensembl chr 5:166,350,304...166,370,482
JBrowse link
G Clpb ClpB family mitochondrial disaggregase involved_in ISO
IEA
(PMID:31522117)
GO_REF:0000107
RGD
Ensembl
PMID:31522117 GO_REF:0000107 NCBI chr 1:165,440,705...165,563,514
Ensembl chr 1:156,028,930...156,168,788
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr14:15,989,066...15,991,263
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in ISO (PMID:24990078)
(PMID:26494172), (PMID:34678144)
RGD PMID:24990078 PMID:26494172 PMID:34678144 NCBI chr14:62,999,886...63,037,829
Ensembl chr14:58,787,127...58,825,088
JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO (PMID:35263596) RGD PMID:35263596 NCBI chr20:2,866,804...2,879,790
Ensembl chr20:2,862,000...2,874,948
JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:86,120,677...86,132,095
Ensembl chr10:85,620,357...85,631,525
JBrowse link
G Dus2 dihydrouridine synthase 2 involved_in ISO UniProtKB:P19525 (PMID:18096616) RGD PMID:18096616 NCBI chr19:50,816,306...50,864,559
Ensembl chr19:33,911,750...33,954,709
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:22948139)
Ensembl
RGD
PMID:22948139 GO_REF:0000107 NCBI chr 6:21,941,147...21,977,115
Ensembl chr 6:16,188,979...16,224,971
JBrowse link
G Hcfc2 host cell factor C2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5445585 (PMID:28970238)
Ensembl
RGD
PMID:28970238 GO_REF:0000107 NCBI chr 7:22,875,440...22,907,391
Ensembl chr 7:20,991,017...21,019,801
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:3663677 (PMID:28031478)
GO_Central
RGD
PMID:28031478 GO_REF:0000033 NCBI chr 3:67,635,924...67,683,968
Ensembl chr 3:47,227,364...47,275,456
JBrowse link
G Ifit2 interferon-induced protein with tetratricopeptide repeats 2 involved_in
acts_upstream_of_or_within
ISO (PMID:19416887)
(PMID:31390091)
RGD PMID:19416887 PMID:31390091 NCBI chr 1:241,515,735...241,521,799
Ensembl chr 1:232,102,570...232,108,635
JBrowse link
G Ifit3 interferon-induced protein with tetratricopeptide repeats 3 involved_in ISO (PMID:21642987) RGD PMID:21642987 NCBI chr 1:241,527,326...241,532,469
Ensembl chr 1:232,114,166...232,119,307
JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:9891032) RGD PMID:9891032 NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:32935379)
UniProt
RGD
PMID:32935379 GO_REF:0000024 NCBI chr 7:15,183,931...15,209,988
Ensembl chr 7:14,481,761...14,507,794
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:27992402) RGD PMID:27992402 NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:35102342) RGD PMID:35102342 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G Morc3 MORC family CW-type zinc finger 3 involved_in ISO (PMID:27440897) RGD PMID:27440897 NCBI chr11:46,621,575...46,664,315
Ensembl chr11:33,152,025...33,194,646
JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:18835251) RGD PMID:18835251 NCBI chr 8:109,897,723...109,958,247
Ensembl chr 8:101,018,702...101,079,300
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in ISO (PMID:33093214) RGD PMID:33093214 NCBI chr10:56,277,134...56,332,229
Ensembl chr10:55,778,560...55,825,180
JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:26494172), (PMID:34678144)
GO_REF:0000107
(PMID:34161762)
UniProt
RGD
Ensembl
PMID:26494172 PMID:34161762 PMID:34678144 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:205,434,484...205,441,245
Ensembl chr 1:196,004,953...196,011,113
JBrowse link
G Nmb neuromedin B involved_in ISO (PMID:31601264) RGD PMID:31601264 NCBI chr 1:144,278,678...144,290,523
Ensembl chr 1:134,869,446...134,872,190
JBrowse link
G Nmbr neuromedin B receptor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:31601264)
UniProt
Ensembl
RGD
PMID:31601264 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:10,942,476...10,966,174
Ensembl chr 1:9,134,889...9,145,462
JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,330,423...41,341,130
Ensembl chr12:35,669,801...35,680,517
JBrowse link
G Oas1b 2-5 oligoadenylate synthetase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,385,184...41,395,891
Ensembl chr12:35,724,055...35,735,242
JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,309,214...41,318,823
Ensembl chr12:35,648,583...35,657,902
JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,410,954...41,419,924
Ensembl chr12:35,750,359...35,759,301
JBrowse link
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,343,449...41,356,400
Ensembl chr12:35,683,699...35,693,366
JBrowse link
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,285,201...41,297,242
Ensembl chr12:35,624,592...35,636,604
JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,464,568...41,492,036
Ensembl chr12:35,806,759...35,829,371
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,439,645...41,463,392
Ensembl chr12:35,779,022...35,802,781
JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:47,343,551...47,356,509
Ensembl chr12:41,682,900...41,695,641
JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:47,369,829...47,383,337
Ensembl chr12:41,709,435...41,722,547
JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:36943869) RGD PMID:36943869 NCBI chr19:45,141,043...45,184,136
Ensembl chr19:28,236,713...28,279,815
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO
IEA
(PMID:15231837)
GO_REF:0000107
RGD
Ensembl
PMID:15231837 GO_REF:0000107 NCBI chr16:1,926,807...1,932,383
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:31522117) RGD PMID:31522117 NCBI chr10:81,102,043...81,114,815
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Phb2 prohibitin 2 involved_in ISO
IEA
(PMID:31522117)
GO_REF:0000107
RGD
Ensembl
PMID:31522117 GO_REF:0000107 NCBI chr 4:159,203,948...159,208,561
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in IEA
ISO
GO_REF:0000107
(PMID:26454002)
Ensembl
RGD
PMID:26454002 GO_REF:0000107 NCBI chr 3:81,982,669...82,002,028
Ensembl chr 3:61,575,447...61,594,347
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:38114488) RGD PMID:38114488 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rig1 RNA sensor RIG-1 involved_in ISO
IBA
(PMID:28469175)
GO_REF:0000033
RGD
GO_Central
PMID:28469175 GO_REF:0000033 NCBI chr 5:60,117,398...60,165,995
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO
ISS
(PMID:28469175), (PMID:31006531)
(PMID:21147464), (PMID:23950712)
GO_REF:0000024
RGD
UniProt
PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 GO_REF:0000024 NCBI chr10:65,668,441...65,687,671
Ensembl chr10:65,170,560...65,262,804
JBrowse link
G Rpsa ribosomal protein SA involved_in ISO (PMID:38114488) RGD PMID:38114488 NCBI chr 8:128,728,761...128,732,736
Ensembl chr 8:119,851,225...119,855,247
JBrowse link
G Senp7 SUMO specific peptidase 7 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:28095500)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28095500 GO_REF:0000024 GO_REF:0000107 NCBI chr11:57,892,801...58,053,213
Ensembl chr11:44,423,735...44,564,711
JBrowse link
G Serinc3 serine incorporator 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:26416733), (PMID:26416734), (PMID:37474505)
Ensembl
RGD
PMID:26416733 PMID:26416734 PMID:37474505 GO_REF:0000107 NCBI chr 3:172,721,208...172,749,853
Ensembl chr 3:152,301,772...152,321,808
JBrowse link
G Serinc5 serine incorporator 5 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:26416733), (PMID:26416734), (PMID:37474505)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26416733 PMID:26416734 PMID:37474505 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:25,581,952...25,685,403
Ensembl chr 2:23,846,900...23,950,346
JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:38114488) RGD PMID:38114488 NCBI chr19:44,172,465...44,208,967
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IEA
(PMID:21074459)
GO_REF:0000107
RGD
Ensembl
PMID:21074459 GO_REF:0000107 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:14703513), (PMID:22394562) RGD PMID:14703513 PMID:22394562 NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tmem120a transmembrane protein 120A involved_in ISO
IEA
(PMID:35013224)
GO_REF:0000107
RGD
Ensembl
PMID:35013224 GO_REF:0000107 NCBI chr12:26,578,859...26,587,524
Ensembl chr12:20,942,439...20,990,316
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:11773383) RGD PMID:11773383 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 acts_upstream_of_or_within ISO MGI:5795738 (PMID:31390091) RGD PMID:31390091 NCBI chr13:107,223,499...107,248,358
Ensembl chr13:104,694,805...104,719,673
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO
IEA
(PMID:18984593)
GO_REF:0000107
RGD
Ensembl
PMID:18984593 GO_REF:0000107 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:36943869) RGD PMID:36943869 NCBI chr 1:166,376,829...166,399,441
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:17392790) RGD PMID:17392790 NCBI chr10:74,310,024...74,328,473
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:27992402) RGD PMID:27992402 NCBI chr20:1,658,386...1,671,711
Ensembl chr20:1,653,165...1,666,494
JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:35263596) RGD PMID:35263596 NCBI chr 1:168,095,619...168,108,809
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Trim65 tripartite motif-containing 65 acts_upstream_of_or_within ISO MGI:6356825|MGI:6356826|MGI:6356827 (PMID:28031478) RGD PMID:28031478 NCBI chr10:101,847,822...101,863,052
Ensembl chr10:101,357,937...101,364,971
JBrowse link
G Trim7 tripartite motif-containing 7 involved_in ISO (PMID:35893676) RGD PMID:35893676 NCBI chr10:33,706,614...33,722,609
Ensembl chr10:33,205,491...33,221,468
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 involved_in ISO (PMID:36603579) RGD PMID:36603579 NCBI chr13:84,875,719...84,910,706
Ensembl chr13:82,342,946...82,377,469
Ensembl chr 6:82,342,946...82,377,469
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:35893676) RGD PMID:35893676 NCBI chr 7:32,041,190...32,071,252
Ensembl chr 7:30,154,616...30,184,355
JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in ISO (PMID:35893676) RGD PMID:35893676 NCBI chr 5:7,474,039...7,531,526
Ensembl chr 5:2,690,763...2,814,965
JBrowse link
G Ubl7 ubiquitin-like 7 involved_in ISO (PMID:36943869) RGD PMID:36943869 NCBI chr 8:67,217,151...67,236,224
Ensembl chr 8:58,320,866...58,340,344
JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:27801882) RGD PMID:27801882 NCBI chr 4:156,143,770...156,171,292
Ensembl chr 4:154,471,592...154,499,144
JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:27801882) RGD PMID:27801882 NCBI chr 3:34,670,613...34,704,156
Ensembl chr 3:14,272,908...14,306,409
JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:31968013) RGD PMID:31968013 NCBI chr 7:30,251,142...30,301,185
Ensembl chr 7:28,364,033...28,410,053
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:34192517) RGD PMID:34192517 NCBI chr 3:182,411,665...182,427,604
Ensembl chr 3:161,993,351...162,003,870
JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 involved_in ISO
IBA
(PMID:25299331)
GO_REF:0000033
RGD
GO_Central
PMID:25299331 GO_REF:0000033 NCBI chr19:50,260,445...50,285,634
Ensembl chr19:33,350,533...33,375,616
JBrowse link
G Zdhhc11 zinc finger, DHHC-type containing 11 involved_in ISO
IBA
(PMID:29429998)
GO_REF:0000033
RGD
GO_Central
PMID:29429998 GO_REF:0000033 NCBI chr 1:31,124,900...31,156,075
Ensembl chr 1:29,296,334...29,326,898
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:15294986) RGD PMID:15294986 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in
ISO (PMID:12719478)
(PMID:19358895)
RGD PMID:12719478 PMID:19358895 NCBI chr 4:164,588,737...164,599,953
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Fcna ficolin A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:28,844,036...28,847,441
Ensembl chr 3:8,445,907...8,449,105
JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:21037097) RGD PMID:21037097 NCBI chr 3:31,791,750...31,800,188
Ensembl chr 3:11,393,739...11,402,151
JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISO
ISS
(PMID:21037097)
GO_REF:0000024
RGD
UniProt
PMID:21037097 GO_REF:0000024 NCBI chr 1:95,199,277...95,202,599
Ensembl chr 1:86,072,184...86,075,033
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO
IEA
(PMID:15294986)
GO_REF:0000107
RGD
Ensembl
PMID:15294986 GO_REF:0000107 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:22966085) RGD PMID:22966085 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO
IEA
(PMID:19358895)
GO_REF:0000107
RGD
Ensembl
PMID:19358895 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927
Ensembl chr17:12,604,619...12,661,410
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2178675 (PMID:12719478) RGD PMID:12719478 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
cellular response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:24500530) RGD PMID:24500530 NCBI chr11:50,375,101...50,399,373
Ensembl chr11:36,906,111...36,930,342
JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 involved_in ISO (PMID:24525126) RGD PMID:24525126 NCBI chr11:75,965,717...76,006,733
Ensembl chr11:62,460,213...62,496,658
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:28835460) RGD PMID:28835460 NCBI chr 8:118,585,082...118,586,382
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
cellular response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:19014335) RGD PMID:19014335 NCBI chr15:86,286,531...86,295,803
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Actg1 actin, gamma 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr10:106,118,106...106,120,951
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:93,434,045...93,435,969
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
JBrowse link
G Actr2 actin related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1921367 (PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr14:98,500,119...98,535,092
Ensembl chr14:94,296,443...94,340,524
JBrowse link
G Actr3 actin related protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1913963 (PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr13:39,353,413...39,396,509
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:30,697,354...30,736,539
Ensembl chr 3:10,300,028...10,346,687
JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISO
IEP
(PMID:9614071)
PMID:7769138
RGD PMID:9614071 PMID:7769138 RGD:61535 NCBI chr20:3,651,435...3,657,341
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Aqp4 aquaporin 4 involved_in ISO
IEA
(PMID:17645239)
GO_REF:0000107
RGD
Ensembl
PMID:17645239 GO_REF:0000107 NCBI chr18:6,782,389...6,799,034
Ensembl chr18:6,507,903...6,524,856
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Asl argininosuccinate lyase IEP with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr12:32,295,779...32,313,257
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP with TNFalpha RGD PMID:12589771 PMID:11072090 RGD:1599307, RGD:4139899 NCBI chr 3:35,144,765...35,194,632
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Atl3 atlastin GTPase 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:214,110,127...214,151,098
Ensembl chr 1:204,680,968...204,723,354
JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:11972023) RGD PMID:11972023 NCBI chr 6:125,217,191...125,227,855
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:11972023) RGD PMID:11972023 NCBI chr 6:12,845,170...12,857,830
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:11972023) RGD PMID:11972023 NCBI chr 1:86,718,761...86,725,869
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:11972023)
Ensembl
RGD
PMID:11972023 GO_REF:0000107 NCBI chr18:56,648,779...56,711,505
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Capg capping actin protein, gelsolin like acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 4:106,152,912...106,170,010
Ensembl chr 4:104,594,753...104,611,856
JBrowse link
G Casp1 caspase 1 involved_in ISO (PMID:11536016) RGD PMID:11536016 NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO
(PMID:14662900)
(PMID:9407497)
RGD PMID:9407497 PMID:14662900 PMID:14512159 RGD:8548859 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISO (PMID:9407497) RGD PMID:9407497 NCBI chr10:68,948,889...68,950,439
Ensembl chr10:68,451,388...68,452,938
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) RGD PMID:9407497 NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Cd47 Cd47 molecule involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:64,374,816...64,438,763
Ensembl chr11:50,906,177...50,969,425
JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdc42ep2 CDC42 effector protein 2 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 1:212,631,317...212,640,231
Ensembl chr 1:203,201,873...203,210,897
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr10:99,271,750...99,298,551
Ensembl chr10:98,772,495...98,797,695
JBrowse link
G Cfh complement factor H IEP RGD PMID:12121434 RGD:632369 NCBI chr13:54,063,079...54,164,523
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:11071855 RGD:632488 NCBI chr10:5,646,854...5,694,393
Ensembl chr10:5,140,178...5,187,440
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:18768927 RGD:11344890 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cripto cripto, EGF-CFC family member involved_in ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 IEP RGD PMID:12121434 RGD:632369 NCBI chr 7:108,653,385...108,660,062
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835)
(PMID:23071094)
RGD PMID:18995835 PMID:23071094 NCBI chr17:3,935,826...4,096,858
Ensembl chr17:3,930,213...4,090,991
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO
IEA
(PMID:18995835)
(PMID:23071094)
GO_REF:0000107
RGD
Ensembl
PMID:18995835 PMID:23071094 GO_REF:0000107 NCBI chr 7:9,174,903...9,183,272
Ensembl chr 7:8,524,183...8,532,558
JBrowse link
G Daxx death-domain associated protein IMP RGD PMID:21572393 RGD:9587767 NCBI chr20:4,971,973...4,978,062
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:22301113 RGD:8662301 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G ENSRNOG00000065742 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:231,461,798...231,474,541 JBrowse link
G ENSRNOG00000066766 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr14:4,692,271...4,708,839 JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO (PMID:15479637)
(PMID:23071094)
RGD PMID:15479637 PMID:23071094 NCBI chr13:99,431,955...99,503,510
Ensembl chr13:96,901,575...96,971,966
JBrowse link
G Epsti1 epithelial stromal interaction 1 acts_upstream_of_or_within ISO (PMID:29217193) RGD PMID:29217193 NCBI chr15:59,692,712...59,791,376
Ensembl chr15:53,284,216...53,382,191
JBrowse link
G Evl Enah/Vasp-like acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 6:133,238,547...133,358,730
Ensembl chr 6:127,474,543...127,594,344
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10029626 RGD:14700709 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Faslg Fas ligand IEP RGD PMID:10029626 RGD:14700709 NCBI chr13:76,680,885...76,706,042
Ensembl chr13:74,154,954...74,162,215
JBrowse link
G Fcar Fc alpha receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:78,669,119...78,703,223 JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr15:19,392,212...19,525,278
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:15479637) RGD PMID:15479637 NCBI chr 4:159,648,592...159,653,436
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Gbp1 guanylate binding protein 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17266443), (PMID:21151871)
(PMID:18025219)
GO_REF:0000033
RGD
GO_Central
PMID:17266443 PMID:18025219 PMID:21151871 GO_REF:0000033 NCBI chr 2:234,071,366...234,106,012
Ensembl chr 2:231,398,163...231,432,131
Ensembl chr 2:231,398,163...231,432,131
JBrowse link
G Gbp1-ps1 guanylate binding protein 1, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,190,708...234,199,103
Ensembl chr 2:231,517,398...231,529,600
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:17266443)
(PMID:18025219)
GO_REF:0000033
GO_REF:0000117
RGD
GO_Central
UniProt
PMID:17266443 PMID:18025219 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:234,005,727...234,021,812
Ensembl chr 2:231,332,284...231,348,571
JBrowse link
G Gbp3 guanylate binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,144,042...234,173,527
Ensembl chr 2:231,486,062...231,493,098
JBrowse link
G Gbp4 guanylate binding protein 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17266443)
(PMID:18025219)
GO_REF:0000033
RGD
GO_Central
PMID:17266443 PMID:18025219 GO_REF:0000033 NCBI chr 2:233,978,163...233,992,124
Ensembl chr 2:231,305,244...231,318,879
JBrowse link
G Gbp5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17266443)
(PMID:18025219)
GO_REF:0000033
RGD
GO_Central
PMID:17266443 PMID:18025219 GO_REF:0000033 NCBI chr 2:233,910,999...233,930,320
Ensembl chr 2:231,237,748...231,257,061
JBrowse link
G Gbp6 guanylate binding protein family member 6 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18025219)
GO_Central
RGD
PMID:18025219 GO_REF:0000033 NCBI chr14:5,034,999...5,062,023
Ensembl chr14:4,730,453...4,839,062
Ensembl chr14:4,730,453...4,839,062
JBrowse link
G Gbp6-ps1 guanylate binding protein 6, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:4,966,495...4,983,714
Ensembl chr14:4,663,614...4,678,985
JBrowse link
G Gbp6-ps2 guanylate binding protein 6, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,302,483...234,333,245
Ensembl chr 2:231,643,535...231,741,152
JBrowse link
G Gbp7 guanylate binding protein 7 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:18025219)
GO_Central
RGD
PMID:18025219 GO_REF:0000033 NCBI chr 2:233,948,774...233,970,532
Ensembl chr 2:231,275,640...231,297,278
JBrowse link
G Gsn gelsolin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:7865494 RGD:11520781 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219) RGD PMID:18025219 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) RGD PMID:12023369 NCBI chr16:18,654,207...18,668,887
Ensembl chr16:18,620,770...18,632,769
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18547159 RGD:4889457 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Irf1 interferon regulatory factor 1 IEP RGD PMID:21261980 RGD:5128727 NCBI chr10:38,417,935...38,424,946
Ensembl chr10:37,916,670...37,924,166
JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO
IEP
(PMID:25122610) RGD PMID:25122610 PMID:21261980 RGD:5128727 NCBI chr19:65,699,284...65,721,066
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Irgm immunity-related GTPase M acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Kif16b kinesin family member 16B acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 3:150,428,233...150,707,755
Ensembl chr 3:129,974,800...130,254,019
JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr17:56,185,386...56,222,990
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) RGD PMID:23817958 NCBI chr10:64,405,044...64,428,249
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO (PMID:22832163) RGD PMID:22832163 NCBI chr17:82,157,725...82,239,411
Ensembl chr17:77,249,187...77,330,857
JBrowse link
G Mst1 macrophage stimulating 1 IEP RGD PMID:21572393 RGD:9587767 NCBI chr 8:117,646,485...117,652,016
Ensembl chr 8:108,768,839...108,773,416
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:7524476 RGD:10059620 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myo18a myosin XVIIIa acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr10:63,152,303...63,253,543
Ensembl chr10:62,654,281...62,755,468
JBrowse link
G Myo1c myosin 1C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18025219)
Ensembl
RGD
PMID:18025219 GO_REF:0000107 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:15231837)
Ensembl
RGD
PMID:15231837 GO_REF:0000107 NCBI chr16:1,926,807...1,932,383
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 IEP RGD PMID:18466611 RGD:2311658 NCBI chr10:92,090,263...92,152,002
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISS
ISO
GO_REF:0000024
(PMID:37797010)
UniProt
RGD
PMID:37797010 GO_REF:0000024 NCBI chr20:7,556,496...7,560,747
Ensembl chr20:7,554,921...7,559,174
JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 4:119,428,766...119,466,277
Ensembl chr 4:117,871,308...117,908,741
JBrowse link
G Rab12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 9:113,927,119...113,953,722
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab20 RAB20, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr16:84,721,427...84,745,610
Ensembl chr16:78,019,337...78,043,529
JBrowse link
G Rab43 RAB43, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 4:121,806,992...121,826,694
Ensembl chr 4:120,249,879...120,269,174
JBrowse link
G Rab7b Rab7b, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr13:45,673,396...45,699,798
Ensembl chr13:43,121,226...43,147,581
JBrowse link
G Rpl13a ribosomal protein L13A involved_in ISO (PMID:15479637)
(PMID:23071094)
RGD PMID:15479637 PMID:23071094 NCBI chr 1:104,746,223...104,748,975
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (PMID:28178239) RGD PMID:28178239 NCBI chr10:71,817,794...71,865,211
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in ISO (PMID:8568247) RGD PMID:8568247 NCBI chr20:4,762,425...4,772,439
Ensembl chr20:4,760,118...4,770,244
JBrowse link
G Serpina3n serpin family A member 3N IEP RGD PMID:7619083 RGD:5147424 NCBI chr 6:129,088,392...129,095,950
Ensembl chr 6:123,323,629...123,332,433
JBrowse link
G Sirpa signal-regulatory protein alpha involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr 3:137,272,932...137,311,279
Ensembl chr 3:116,819,726...116,858,098
JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:18655181) RGD PMID:18655181 NCBI chr 8:118,438,110...118,448,271
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
G Slk STE20-like kinase IDA RGD PMID:21572393 RGD:9587767 NCBI chr 1:256,415,013...256,470,942
Ensembl chr 1:246,473,712...246,526,530
JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEP RGD PMID:10707961 RGD:151232287 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEP RGD PMID:10707961 RGD:151232287 NCBI chr10:103,692,579...103,695,975
Ensembl chr10:103,193,537...103,197,787
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:9564825 RGD:4891971 NCBI chr16:72,969,824...72,974,447
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:11972023), (PMID:23386060) RGD PMID:11972023 PMID:23386060 NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:49,419,340...49,588,540
JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 1:9,111,216...9,140,227
Ensembl chr 1:7,289,976...7,320,164
JBrowse link
G Stx4 syntaxin 4 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 1:191,880,549...191,890,333
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Stx8 syntaxin 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr10:53,154,572...53,393,912
Ensembl chr10:52,654,990...52,894,993
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 3:36,474,428...36,536,120
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Stxbp2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr12:6,487,265...6,498,351
Ensembl chr12:1,689,410...1,700,458
JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 2:199,130,725...199,173,823
Ensembl chr 2:196,442,634...196,485,671
JBrowse link
G Stxbp4 syntaxin binding protein 4 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr10:75,798,938...75,955,817
Ensembl chr10:75,305,463...75,458,663
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IEA
(PMID:15479637)
GO_REF:0000107
RGD
Ensembl
PMID:15479637 GO_REF:0000107 NCBI chr 8:98,282,358...98,315,412
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO (PMID:11672593) RGD PMID:11672593 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr3 toll-like receptor 3 NOT IEP intestinal epithelial cells
thyrocytes
RGD PMID:16638093 PMID:15661832 RGD:5128794, RGD:5128798 NCBI chr16:53,554,916...53,572,321
Ensembl chr16:46,822,039...46,836,545
JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
IEA
(PMID:11672593)
GO_REF:0000107
RGD
Ensembl
PMID:11672593 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tnf tumor necrosis factor involved_in IEP
ISO
(PMID:29849090) RGD PMID:29849090 PMID:16525716 RGD:14985246 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 5:166,780,927...166,791,522
Ensembl chr 5:161,498,109...161,508,751
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr13:77,453,135...77,475,909
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 4:106,000,570...106,011,081
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vim vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 NCBI chr17:81,577,261...81,585,746
Ensembl chr17:76,668,647...76,677,187
JBrowse link
G Vps26b VPS26 retromer complex component B acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 8:33,675,025...33,696,132
Ensembl chr 8:25,415,261...25,436,985
JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr  X:17,077,057...17,085,802
Ensembl chr  X:14,405,124...14,413,849
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:18174455)
GO_REF:0000107
RGD
Ensembl
PMID:18174455 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Zyx zyxin acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 4:72,203,991...72,213,181
Ensembl chr 4:71,237,451...71,246,553
JBrowse link
cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35322803), (PMID:35438208), (PMID:35460603), (PMID:39322678)
(PMID:39322678)
RGD PMID:32911482 PMID:32912999 PMID:33542149 PMID:35322803 PMID:35438208 More... NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496
JBrowse link
G Ddx41 DEAD-box helicase 41 involved_in ISO (PMID:35613581) RGD PMID:35613581 NCBI chr17:9,108,030...9,113,562
Ensembl chr17:9,103,010...9,108,415
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:37832545)
(PMID:25636800), (PMID:30842659), (PMID:30842662), (PMID:35388221), (PMID:37832545)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25636800 PMID:30842659 PMID:30842662 PMID:35388221 PMID:37832545 GO_REF:0000024 GO_REF:0000107 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335
JBrowse link
complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:2,174,412...2,201,339
Ensembl chr 9:2,087,437...2,114,429
JBrowse link
G C5 complement C5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:38,668,174...38,759,468
Ensembl chr 3:18,270,696...18,361,994
JBrowse link
G C5l1 complement C5 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:38,799,165...38,818,443
Ensembl chr 3:18,404,899...18,420,054
JBrowse link
G C8a complement C8 alpha chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:124,812,131...124,866,631
Ensembl chr 5:119,583,174...119,637,754
JBrowse link
G C8b complement C8 beta chain involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:124,763,974...124,801,522
Ensembl chr 5:119,535,146...119,572,565
JBrowse link
G C9 complement C9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:57,300,510...57,348,759
Ensembl chr 2:55,572,992...55,621,338
JBrowse link
G Cfb complement factor B acts_upstream_of_or_within ISO MGI:1861129 (PMID:27564415), (PMID:9238044) RGD PMID:9238044 PMID:27564415 NCBI chr20:3,975,271...3,981,138
Ensembl chr20:3,951,474...3,976,505
JBrowse link
G Cfd complement factor D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27564415)
Ensembl
RGD
PMID:27564415 GO_REF:0000107 NCBI chr 7:10,463,773...10,465,496
Ensembl chr 7:9,813,150...9,815,053
JBrowse link
G Cfh complement factor H acts_upstream_of_or_within
acts_upstream_of_or_within_negative_effect
ISO (PMID:27564415)
(PMID:19828624)
RGD PMID:19828624 PMID:27564415 NCBI chr13:54,063,079...54,164,523
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Cfp complement factor properdin involved_in ISO MGI:3774548 (PMID:18292556) RGD PMID:18292556 NCBI chr  X:3,715,551...3,721,113
Ensembl chr  X:1,161,979...1,167,573
JBrowse link
G Cr2 complement C3d receptor 2 involved_in
acts_upstream_of_or_within_negative_effect
ISO (PMID:11981823)
(PMID:19828624)
RGD PMID:11981823 PMID:19828624 NCBI chr13:109,207,034...109,244,980
Ensembl chr13:106,685,413...106,716,235
JBrowse link
complement activation, lectin pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006691.1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 1:228,016,498...228,043,066 JBrowse link
G Cd69 Cd69 molecule TAS RGD PMID:11034393 PMID:15506986 RGD:1354527, RGD:1354528 NCBI chr 4:164,411,485...164,419,403
Ensembl chr 4:162,725,446...162,733,542
JBrowse link
G Colec10 collectin subfamily member 10 involved_in ISO (PMID:24174618) RGD PMID:24174618 NCBI chr 7:87,634,686...87,695,465
Ensembl chr 7:85,744,895...85,805,675
JBrowse link
G Colec11 collectin sub-family member 11 involved_in ISO (PMID:24174618), (PMID:25912189) RGD PMID:24174618 PMID:25912189 NCBI chr 6:50,952,357...50,984,845
Ensembl chr 6:45,223,980...45,271,145
JBrowse link
G Fcna ficolin A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:28,844,036...28,847,441
Ensembl chr 3:8,445,907...8,449,105
JBrowse link
G Fcnb ficolin B involved_in ISO
IBA
(PMID:16116205)
GO_REF:0000033
RGD
GO_Central
PMID:16116205 GO_REF:0000033 NCBI chr 3:31,791,750...31,800,188
Ensembl chr 3:11,393,739...11,402,151
JBrowse link
G Krt1 keratin 1 involved_in ISO
IEA
UniProtKB:P11226 (PMID:11549596)
GO_REF:0000107
RGD
Ensembl
PMID:11549596 GO_REF:0000107 NCBI chr 7:134,855,311...134,860,537
Ensembl chr 7:132,976,620...132,981,844
JBrowse link
G Masp1 MBL associated serine protease 1 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:18424734)
GO_REF:0000033
GO_REF:0000107
(PMID:17182967)
UniProt
RGD
GO_Central
Ensembl
PMID:17182967 PMID:18424734 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:90,839,081...90,909,922
Ensembl chr11:77,334,859...77,402,974
JBrowse link
G Masp2 MBL associated serine protease 2 involved_in ISO
IBA
IEA
(PMID:17182967), (PMID:9087411)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:9087411 PMID:17182967 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:164,319,017...164,332,686
Ensembl chr 5:159,035,911...159,049,580
JBrowse link
G Mbl1 mannose binding lectin 1 acts_upstream_of_or_within IDA
ISO
MGI:96924 (PMID:15148336) RGD PMID:15148336 PMID:16272342 RGD:1582134 NCBI chr16:17,063,232...17,069,271
Ensembl chr16:17,029,118...17,035,174
JBrowse link
G Mbl2 mannose binding lectin 2 acts_upstream_of_or_within
involved_in
ISO (PMID:15148336)
MGI:3577339|MGI:96923 (PMID:15148336)
UniProtKB:P04264 (PMID:11549596), (PMID:22691502), (PMID:35102342)
RGD PMID:11549596 PMID:15148336 PMID:22691502 PMID:35102342 NCBI chr 1:237,429,873...237,465,567 JBrowse link
cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha-kinase 1 involved_in ISO
IBA
(PMID:28222186), (PMID:28877472), (PMID:30111836)
(PMID:30111836)
GO_REF:0000033
RGD
GO_Central
PMID:28222186 PMID:28877472 PMID:30111836 GO_REF:0000033 NCBI chr 2:218,801,425...218,924,013
Ensembl chr 2:216,128,825...216,247,157
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:34796041) RGD PMID:34796041 NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) RGD PMID:23258413 NCBI chr 8:88,172,559...88,187,538
Ensembl chr 8:79,294,511...79,305,496
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:23478265) RGD PMID:23478265 NCBI chr  X:12,152,346...12,165,983
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in ISO
IBA
(PMID:19211564)
GO_REF:0000033
RGD
GO_Central
PMID:19211564 GO_REF:0000033 NCBI chr10:86,120,677...86,132,095
Ensembl chr10:85,620,357...85,631,525
JBrowse link
G Ipo5 importin 5 involved_in ISO (PMID:31340999) RGD PMID:31340999 NCBI chr15:104,397,626...104,447,985
Ensembl chr15:98,005,299...98,041,126
JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:8524823) RGD PMID:8524823 NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Irf7 interferon regulatory factor 7 involved_in ISO (PMID:21931555) RGD PMID:21931555 NCBI chr 1:205,796,956...205,800,543
Ensembl chr 1:196,367,361...196,370,832
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:16125763), (PMID:20451243) RGD PMID:16125763 PMID:20451243 NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Rig1 RNA sensor RIG-1 involved_in ISO
IBA
(PMID:19576794)
GO_REF:0000033
RGD
GO_Central
PMID:19576794 GO_REF:0000033 NCBI chr 5:60,117,398...60,165,995
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:23910378), (PMID:35388221) RGD PMID:23910378 PMID:35388221 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:29441066) RGD PMID:29441066 NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tifa TRAF-interacting protein with forkhead-associated domain involved_in ISO
IBA
ISS
(PMID:26068852), (PMID:28222186), (PMID:28877472), (PMID:30111836)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:26068852 PMID:28222186 PMID:28877472 PMID:30111836 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:218,927,724...218,942,111
Ensembl chr 2:216,234,774...216,267,841
JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 involved_in ISO
IBA
(PMID:31390091)
GO_REF:0000033
RGD
GO_Central
PMID:31390091 GO_REF:0000033 NCBI chr13:107,223,499...107,248,358
Ensembl chr13:104,694,805...104,719,673
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA
ISO
GO_REF:0000107
(PMID:20501938), (PMID:23015697)
Ensembl
RGD
PMID:20501938 PMID:23015697 GO_REF:0000107 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:17392790) RGD PMID:17392790 NCBI chr10:74,310,024...74,328,473
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in ISO (PMID:22607805) RGD PMID:22607805 NCBI chr10:61,082,934...61,120,618
Ensembl chr10:60,584,652...60,671,589
JBrowse link
endolysosomal toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Washc4 WASH complex subunit 4 acts_upstream_of_or_within ISO (PMID:33749590) RGD PMID:33749590 NCBI chr 7:22,075,546...22,127,847
Ensembl chr 7:20,187,922...20,240,226
JBrowse link
host-mediated suppression of symbiont invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in IEA
ISO
GO_REF:0000107
(PMID:23544079)
Ensembl
RGD
PMID:23544079 GO_REF:0000107 NCBI chr13:87,905,532...87,906,508
Ensembl chr13:85,373,220...85,374,298
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr18:56,527,071...56,536,406
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator involved_in ISO (PMID:32855215) RGD PMID:32855215 NCBI chr10:5,646,854...5,694,393
Ensembl chr10:5,140,178...5,187,440
JBrowse link
G ENSRNOG00000068074 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 4:59,549,152...59,549,829 JBrowse link
G ENSRNOG00000070481 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 4:30,960,845...30,961,834 JBrowse link
G Fcnb ficolin B involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:31,791,750...31,800,188
Ensembl chr 3:11,393,739...11,402,151
JBrowse link
G Gsn gelsolin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:21253575), (PMID:23358889), (PMID:26354436)
(PMID:25738301)
GO_REF:0000033
RGD
GO_Central
PMID:21253575 PMID:23358889 PMID:25738301 PMID:26354436 GO_REF:0000033 NCBI chr 1:205,496,757...205,498,796
Ensembl chr 1:196,067,963...196,069,169
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 involved_in ISO
IBA
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)
GO_REF:0000033
RGD
GO_Central
PMID:21253575 PMID:23358889 PMID:26354436 PMID:33563656 GO_REF:0000033 NCBI chr 1:205,481,168...205,482,348
Ensembl chr 1:196,051,537...196,052,741
JBrowse link
G Ifitm2-ps2 interferon induced transmembrane protein 2, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:70,737,384...70,738,072
Ensembl chr13:68,187,366...68,187,854
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:21253575)
GO_REF:0000033
(PMID:20943977), (PMID:21253575), (PMID:23358889), (PMID:26354436)
UniProt
RGD
GO_Central
PMID:20943977 PMID:21253575 PMID:23358889 PMID:26354436 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:205,540,649...205,541,758
Ensembl chr 1:196,111,043...196,112,203
JBrowse link
G Ifitm3-ps1 interferon induced transmembrane protein 3, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:65,445,869...65,446,288
Ensembl chr14:61,233,269...61,233,688
JBrowse link
G Ifitm3-ps2 interferon induced transmembrane protein 3, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:46,606,814...46,607,230
Ensembl chr11:33,137,146...33,138,061
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:205,546,648...205,547,920
Ensembl chr 1:196,117,049...196,118,386
JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in ISO
IEA
(PMID:36228039), (PMID:36757924)
GO_REF:0000107
RGD
Ensembl
PMID:36228039 PMID:36757924 GO_REF:0000107 NCBI chr11:83,974,708...83,989,157
Ensembl chr11:70,469,804...70,484,267
JBrowse link
G Ly6e lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(PMID:32704094)
RGD PMID:32641482 PMID:32704094 NCBI chr 7:108,815,970...108,820,444
Ensembl chr 7:106,935,761...106,939,689
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr  X:109,143,057...109,245,257
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease IMP RGD PMID:22850678 RGD:8693392 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Nbn nibrin IMP RGD PMID:22850678 RGD:8693392 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:152,797,563...152,803,372
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
G Rad50 RAD50 double strand break repair protein IMP RGD PMID:22850678 RGD:8693392 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,574,051...47,607,577
Ensembl chr20:45,992,720...46,025,379
JBrowse link
G Tmeff1 transmembrane protein with EGF-like and two follistatin-like domains 1 involved_in ISO
ISS
(PMID:39048823), (PMID:39048830)
GO_REF:0000024
RGD
UniProt
PMID:39048823 PMID:39048830 GO_REF:0000024 NCBI chr 5:67,706,269...67,792,022
Ensembl chr 5:62,910,740...62,996,493
JBrowse link
G Trim10 tripartite motif-containing 10 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:1,694,771...1,703,724
Ensembl chr20:1,689,562...1,698,252
JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO
IBA
(PMID:18248090)
GO_REF:0000033
RGD
GO_Central
PMID:18248090 GO_REF:0000033 NCBI chr10:44,255,019...44,270,711
Ensembl chr10:43,758,354...43,771,138
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr10:74,310,024...74,328,473
Ensembl chr10:73,812,818...73,831,257
JBrowse link
G Trim26 tripartite motif-containing 26 involved_in ISO
IBA
IEA
(PMID:18248090)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:18248090 GO_REF:0000033 GO_REF:0000107 NCBI chr20:1,711,564...1,736,389
Ensembl chr20:1,709,788...1,731,120
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:1,658,386...1,671,711
Ensembl chr20:1,653,165...1,666,494
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:168,132,277...168,149,263
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr12:25,193,224...25,204,032
Ensembl chr12:19,551,521...19,567,462
JBrowse link
G Trim59 tripartite motif-containing 59 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 2:155,579,183...155,593,450
Ensembl chr 2:153,268,584...153,281,031
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr 1:255,311,039...255,325,937
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
induced systemic resistance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:4421295 (PMID:25084278) RGD PMID:25084278 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
inflammasome-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elp6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within ISO (PMID:30097576) RGD PMID:30097576 NCBI chr 8:119,158,380...119,173,483
Ensembl chr 8:110,279,979...110,295,067