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ONTOLOGY REPORT - ANNOTATIONS

Term:biological process involved in interspecies interaction between organisms
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Accession:GO:0044419 term browser browse the term
Definition:Any process evolved to enable an interaction with an organism of a different species.
Synonyms:exact_synonym: interaction with another species;   interspecies interaction;   interspecies interaction between organisms;   interspecies interaction with other organisms
 xref: Reactome:R-HSA-9824443 "Parasitic Infection Pathways"
 never_in_taxon: NCBITaxon:4895 ! Schizosaccharomyces


show annotations for term's descendants           Sort by:
activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aim2 absent in melanoma 2 involved_in ISO
IBA		 (PMID:19158675), (PMID:19158676), (PMID:19158679)
(PMID:19158676)
GO_REF:0000033		 RGD
GO_Central		 PMID:19158675 PMID:19158676 PMID:19158679 GO_REF:0000033 NCBI chr13:88,397,516...88,439,325 JBrowse link
G Casp6 caspase 6 involved_in ISO
IEA
ISS		 (PMID:32298652)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:32298652 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:221,140,287...221,152,727 JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA		 (PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:29426904), (PMID:30007416), (PMID:32817552), (PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35438208)
(PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:29426904), (PMID:32911480), (PMID:32911481), (PMID:32913000)
GO_REF:0000033		 RGD
GO_Central		 PMID:23258413 PMID:23929945 PMID:24077100 PMID:26046437 PMID:28363908 More... GO_REF:0000033 NCBI chr 8:79,292,282...79,306,998 JBrowse link
G ENSRNOG00000069878 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Gbp1 guanylate binding protein 1 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:234,071,366...234,106,012 JBrowse link
G Gbp2 guanylate binding protein 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:24739961)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:24739961 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:234,005,727...234,021,812 JBrowse link
G Gbp4 guanylate binding protein 4 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:231,304,910...231,318,883 JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:231,237,748...231,257,071 JBrowse link
G Gbp7 guanylate binding protein 7 involved_in ISO (PMID:24739961) RGD PMID:24739961 NCBI chr 2:231,275,521...231,297,289 JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr10:88,062,808...88,064,920 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:24971542) RGD PMID:24971542 NCBI chr12:11,009,236...11,015,941 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO
ISS		 (PMID:20628368)
GO_REF:0000024		 RGD
UniProt		 PMID:20628368 GO_REF:0000024 NCBI chr 6:135,523,604...135,529,687 JBrowse link
G Ifi214 interferon activated gene 214 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:85,940,028...85,951,004 JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:45,264,404...45,290,737 JBrowse link
G LOC102556096 pyrin domain-containing protein 3-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:85,911,915...85,929,491 JBrowse link
G Matr3 matrin 3 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr18:27,428,190...27,474,421 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO
ISS		 (PMID:18818105), (PMID:20628368)
GO_REF:0000024		 RGD
UniProt		 PMID:18818105 PMID:20628368 GO_REF:0000024 NCBI chr 3:118,451,650...118,466,094 JBrowse link
G Mnda myeloid cell nuclear differentiation antigen involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:86,017,888...86,035,556 JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16648852)		 UniProt
RGD		 PMID:16648852 GO_REF:0000024 NCBI chr 6:20,991,785...21,018,254 JBrowse link
G Nlrp10 NLR family, pyrin domain containing 10 involved_in ISO (PMID:22672233) RGD PMID:22672233 NCBI chr 1:162,922,806...162,930,363 JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,778,560...55,833,639 JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,838,381...55,904,374 JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr  X:66,554,131...66,571,992 JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISO
ISS		 (PMID:26046437)
GO_REF:0000024		 RGD
UniProt		 PMID:26046437 GO_REF:0000024 NCBI chr  X:14,603,516...14,608,091 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr11:98,544,952...98,762,499 JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr15:34,941,445...35,027,460 JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO
IBA		 (PMID:19158675)
GO_REF:0000033		 RGD
GO_Central		 PMID:19158675 GO_REF:0000033 NCBI chr 1:192,032,124...192,033,419 JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 1:202,076,940...202,105,688 JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 5:139,338,034...139,353,476 JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) RGD PMID:22783022 NCBI chr 8:57,481,539...57,536,195 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IBA		 (PMID:18818105), (PMID:23910378)
(PMID:21947006), (PMID:23258412), (PMID:23910378)
GO_REF:0000033		 RGD
GO_Central		 PMID:18818105 PMID:21947006 PMID:23258412 PMID:23910378 GO_REF:0000033 NCBI chr18:27,606,196...27,612,544 JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:25636800)
GO_REF:0000033
MGI:3046789 (PMID:15661922)		 RGD
GO_Central		 PMID:15661922 PMID:25636800 GO_REF:0000033 NCBI chr 7:58,963,319...58,996,357 JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within ISO MGI:1860885 (PMID:15661922) RGD PMID:15661922 NCBI chr 5:85,161,247...85,174,882 JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:25686612) RGD PMID:25686612 NCBI chr 8:115,743,407...115,747,523 JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:20628368)		 Ensembl
UniProt
RGD		 PMID:20628368 GO_REF:0000024 GO_REF:0000107 NCBI chr11:56,847,837...56,886,302 JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:158,720,407...158,737,393 JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 9:73,955,216...74,044,020 JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 7:113,542,992...113,563,762 JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32200799), (PMID:32296175), (PMID:32350114), (PMID:33109609)		 UniProt
RGD		 PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 GO_REF:0000024 NCBI chr 3:161,993,351...162,009,297 JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO
IBA		 (PMID:30135424), (PMID:30193849)
GO_REF:0000033		 RGD
GO_Central		 PMID:30135424 PMID:30193849 GO_REF:0000033 NCBI chr 3:140,872,460...140,875,292 JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in ISO (PMID:31685995) RGD PMID:31685995 NCBI chr 3:176,183,111...176,210,812 JBrowse link
adhesion of symbiont to host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp1 guanylate binding protein 1 acts_upstream_of_or_within ISO (PMID:18025219) RGD PMID:18025219 NCBI chr 2:234,071,366...234,106,012 JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18025219)		 Ensembl
RGD		 PMID:18025219 GO_REF:0000107 NCBI chr 2:234,005,727...234,021,812 JBrowse link
G Gbp4 guanylate binding protein 4 acts_upstream_of_or_within ISO (PMID:18025219) RGD PMID:18025219 NCBI chr 2:231,304,910...231,318,883 JBrowse link
G Gbp6 guanylate binding protein family member 6 acts_upstream_of_or_within ISO (PMID:18025219) RGD PMID:18025219 NCBI chr14:5,034,999...5,062,023 JBrowse link
G Gbp7 guanylate binding protein 7 acts_upstream_of_or_within ISO (PMID:18025219) RGD PMID:18025219 NCBI chr 2:231,275,521...231,297,289 JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 NOT|involved_in ISO (PMID:20633027) RGD PMID:20633027 NCBI chr 9:64,073,610...64,084,332 JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:36,957,302...37,023,982 JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin involved_in ISO (PMID:12548285) RGD PMID:12548285 NCBI chr15:24,312,711...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,398,330...24,415,909 JBrowse link
G App amyloid beta precursor protein involved_in IDA PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chr11:37,506,207...37,724,351 JBrowse link
G Bpifa1 BPI fold containing family A, member 1 involved_in ISO
IBA
ISS		 (PMID:23499554)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23499554 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:142,627,810...142,633,553 JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:142,646,103...142,652,884 JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Ctsg cathepsin G involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:33,901,230...33,907,596 JBrowse link
G Defa24 defensin alpha 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,349,550...70,350,582 JBrowse link
G Defa3 defensin alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,533,436...70,535,592 JBrowse link
G Defa31 defensin alpha 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,513,892...70,516,234 JBrowse link
G Defa5 defensin alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,342,530...70,344,854 JBrowse link
G Defa6 defensin alpha 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,405,223...70,406,237 JBrowse link
G Defa8 defensin alpha 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,433,121...70,434,154 JBrowse link
G Defa9 defensin alpha 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,481,813...70,482,803 JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,371,492...70,372,481 JBrowse link
G ENSRNOG00000064390 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000065917 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000070986 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G IgG-2a gamma-2a immunoglobulin heavy chain involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Igh-6 immunoglobulin heavy chain 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Ighg1 immunoglobulin heavy constant gamma 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:11911824), (PMID:9834074)
GO_REF:0000033		 RGD
GO_Central		 PMID:9834074 PMID:11911824 GO_REF:0000033
G Ighm immunoglobulin heavy constant epsilon involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Inhca inhibitor of carbonic anhydrase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:103,836,846...103,874,980 JBrowse link
G Jchain joining chain of multimeric IgA and IgM involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr14:19,822,976...19,831,072 JBrowse link
G Ltf lactotransferrin involved_in ISO
IBA		 (PMID:1599934), (PMID:18714013)
GO_REF:0000033		 RGD
GO_Central		 PMID:1599934 PMID:18714013 GO_REF:0000033 NCBI chr 8:110,999,948...111,022,795 JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,494,607...70,497,261 JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:46,802,932...46,814,511 JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO
IEA		 (PMID:18714013)
GO_REF:0000107		 RGD
Ensembl		 PMID:18714013 GO_REF:0000107 NCBI chr 7:112,731,803...112,771,978 JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,544,364...70,546,533 JBrowse link
G Rnase4 ribonuclease A family member 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:30418175)
(PMID:33818125)		 UniProt
Ensembl
RGD		 PMID:30418175 PMID:33818125 GO_REF:0000024 GO_REF:0000107 NCBI chr15:26,786,287...26,803,634 JBrowse link
G Rnase6 ribonuclease A family member 6 involved_in ISO
IBA		 (PMID:25075772)
GO_REF:0000033		 RGD
GO_Central		 PMID:25075772 GO_REF:0000033 NCBI chr15:26,827,896...26,830,807 JBrowse link
G Semg1 semenogelin 1 involved_in ISO (PMID:18714013) RGD PMID:18714013 NCBI chr 3:152,910,033...152,912,882 JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (PMID:18714013)
(PMID:18322212)		 RGD PMID:18322212 PMID:18714013 NCBI chr 3:173,501,573...173,503,822 JBrowse link
G Slpi-ps1 secretory leukocyte peptidase inhibitor, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,019,109...153,021,371 JBrowse link
G Slpi-ps2 secretory leukocyte peptidase inhibitor, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,056,907...153,061,611 JBrowse link
G Spag11a sperm associated antigen 11A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:70,682,326...70,684,067 JBrowse link
G Sprr2a small proline rich protein 2A involved_in ISO (PMID:34735226) RGD PMID:34735226 NCBI chr 2:177,815,964...177,816,236 JBrowse link
G Tf transferrin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:103,789,780...103,816,487 JBrowse link
G Wap whey acidic protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:81,503,123...81,505,244 JBrowse link
G Wfdc10a WAP four-disulfide core domain 10A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,390,067...153,391,420 JBrowse link
G Wfdc12 WAP four-disulfide core domain 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,861,461...152,862,784 JBrowse link
G Wfdc13 WAP four-disulfide core domain 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,419,553...153,421,306 JBrowse link
G Wfdc15b WAP four-disulfide core domain 15B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,889,453...152,899,392 JBrowse link
G Wfdc16 WAP four-disulfide core domain 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,366,913...153,370,083 JBrowse link
G Wfdc17 WAP four-disulfide core domain 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,561,954...68,562,801 JBrowse link
G Wfdc18 WAP four-disulfide core domain 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,588,818...68,590,972 JBrowse link
G Wfdc2 WAP four-disulfide core domain 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,286,946...153,314,832 JBrowse link
G Wfdc21 WAP four-disulfide core domain 21 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,627,836...68,633,705 JBrowse link
G Wfdc3 WAP four-disulfide core domain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,464,862...153,478,952 JBrowse link
G Wfdc5 WAP four-disulfide core domain 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,849,025...152,854,868 JBrowse link
G Wfdc9 WAP four-disulfide core domain 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:153,380,554...153,389,055 JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Defb44 defensin beta 44 involved_in ISO (PMID:34481960) RGD PMID:34481960 NCBI chr15:37,311,888...37,313,579 JBrowse link
G Il33 interleukin 33 involved_in ISO
IEA		 (PMID:26936882)
GO_REF:0000107		 RGD
Ensembl		 PMID:26936882 GO_REF:0000107 NCBI chr 1:227,701,964...227,736,374 JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32935379)		 UniProt
RGD		 PMID:32935379 GO_REF:0000024 NCBI chr 7:14,480,605...14,507,821 JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:29471394) RGD PMID:29471394 NCBI chr 7:116,804,186...116,804,270 JBrowse link
G Mpeg1 macrophage expressed 1 involved_in
NOT|involved_in		 ISS
ISO		 GO_REF:0000024
(PMID:35471730)
(PMID:26402460)		 UniProt
RGD		 PMID:26402460 PMID:35471730 GO_REF:0000024 NCBI chr 1:209,452,176...209,456,692 JBrowse link
G Muc19 mucin 19, oligomeric acts_upstream_of_or_within ISO (PMID:25512380) RGD PMID:25512380 NCBI chr 7:123,017,896...123,139,053 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20406817)		 Ensembl
RGD		 PMID:20406817 GO_REF:0000107 NCBI chr 2:226,689,745...226,805,897 JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:20406817) RGD PMID:20406817 NCBI chr19:34,555,832...34,596,281 JBrowse link
G Rasgrp4 RAS guanyl releasing protein 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:26982501)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26982501 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:84,433,033...84,452,841 JBrowse link
G Slc15a2 solute carrier family 15 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20406817)		 Ensembl
RGD		 PMID:20406817 GO_REF:0000107 NCBI chr11:77,519,565...77,548,609 JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:32753672), (PMID:35662396) RGD PMID:32753672 PMID:35662396 NCBI chr 9:20,696,440...20,752,265 JBrowse link
G Umod uromodulin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32616672)		 UniProt
Ensembl
RGD		 PMID:32616672 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:183,247,676...183,261,665 JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 galectin 4 acts_upstream_of_or_within ISO (PMID:27427436) RGD PMID:27427436 NCBI chr 1:84,124,766...84,132,481 JBrowse link
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (PMID:20056603) RGD PMID:20056603 NCBI chr 8:13,133,043...13,140,761 JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (PMID:11248802) RGD PMID:11248802 NCBI chr 8:13,133,043...13,140,761 JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ang angiogenin involved_in ISO (PMID:12548285) RGD PMID:12548285 NCBI chr15:24,312,711...24,323,361 JBrowse link
G App amyloid beta precursor protein involved_in IDA PMID:20209079 UniProt PMID:20209079 RGD:10400853 NCBI chr11:37,506,207...37,724,351 JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in ISO (PMID:23147407) RGD PMID:23147407 NCBI chr 3:7,044,419...7,051,016 JBrowse link
G Ltf lactotransferrin involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:110,999,948...111,022,795 JBrowse link
G Spag11a sperm associated antigen 11A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:70,682,326...70,684,067 JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO		 GO_REF:0000024
(PMID:22265677)		 UniProt
RGD		 PMID:22265677 GO_REF:0000024 NCBI chr 2:237,501,181...237,510,821 JBrowse link
G Card9 caspase recruitment domain family, member 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22265677), (PMID:24470469), (PMID:25621893), (PMID:26679537), (PMID:29080677), (PMID:32358020), (PMID:33548172)
(PMID:24231284), (PMID:25057046), (PMID:25702837), (PMID:26488816), (PMID:26679537), (PMID:26961233), (PMID:29080677), (PMID:33548172), (PMID:33558980)		 UniProt
RGD		 PMID:22265677 PMID:24231284 PMID:24470469 PMID:25057046 PMID:25621893 More... GO_REF:0000024 NCBI chr 3:29,569,907...29,578,402 JBrowse link
G Clec4a C-type lectin domain family 4, member A involved_in IBA
ISO		 GO_REF:0000033
(PMID:22041900), (PMID:32358020)		 GO_Central
RGD		 PMID:22041900 PMID:32358020 GO_REF:0000033 NCBI chr 4:156,340,439...156,434,212 JBrowse link
G Clec4a1 C-type lectin domain family 4, member A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:156,173,894...156,186,009 JBrowse link
G Clec4a2 C-type lectin domain family 4, member A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:156,262,438...156,321,695 JBrowse link
G Clec4a3 C-type lectin domain family 4, member A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:156,214,030...156,224,818 JBrowse link
G Clec4b2 C-type lectin domain family 4, member B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:156,462,742...156,486,240 JBrowse link
G Clec4d C-type lectin domain family 4, member D involved_in IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:23911656)
GO_REF:0000033
GO_REF:0000024		 Ensembl
RGD
GO_Central
UniProt		 PMID:23911656 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:156,589,591...156,599,279 JBrowse link
G Clec4e C-type lectin domain family 4, member E involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:18490740)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:18490740 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:158,292,624...158,298,607 JBrowse link
G Clec6a-ps1 C-type lectin domain family 6, member A, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:156,539,408...156,559,032 JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:17159984), (PMID:19136564), (PMID:32358020) RGD PMID:17159984 PMID:19136564 PMID:32358020 NCBI chr 4:162,902,731...162,913,931 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29326275)		 UniProt
RGD		 PMID:29326275 GO_REF:0000024 NCBI chr 8:128,661,294...128,679,048 JBrowse link
G Defb4 defensin beta 4 involved_in ISO (PMID:30050988) RGD PMID:30050988 NCBI chr16:70,650,472...70,653,665 JBrowse link
G Defb44 defensin beta 44 involved_in ISO (PMID:34481960) RGD PMID:34481960 NCBI chr15:37,311,888...37,313,579 JBrowse link
G Defb5 defensin beta 5 involved_in ISO (PMID:30050988) RGD PMID:30050988 NCBI chr16:70,612,985...70,615,389 JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:22041900)		 Ensembl
RGD		 PMID:22041900 GO_REF:0000107 NCBI chr19:62,456,196...62,592,684 JBrowse link
antimicrobial humoral immune response mediated by antimicrobial peptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in ISO (PMID:10225288) RGD PMID:10225288 NCBI chr 1:174,164,178...174,182,372 JBrowse link
G Ang angiogenin involved_in ISO (PMID:12548285) RGD PMID:12548285 NCBI chr15:24,312,711...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:24,398,330...24,415,909 JBrowse link
G App amyloid beta precursor protein involved_in IDA
ISO		 PMID:20209079
(PMID:20209079)		 RGD PMID:20209079 PMID:20209079 RGD:10400853 NCBI chr11:37,506,207...37,724,351 JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:129,549,236...129,555,354 JBrowse link
G Bpifa1 BPI fold containing family A, member 1 involved_in ISO
IBA		 (PMID:21805676)
GO_REF:0000033		 RGD
GO_Central		 PMID:21805676 GO_REF:0000033 NCBI chr 3:142,627,810...142,633,553 JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:142,646,103...142,652,884 JBrowse link
G Calca calcitonin-related polypeptide alpha involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:178,312,636...178,317,588 JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO
IBA		 (PMID:12860195)
GO_REF:0000033
(PMID:17012259)
(PMID:7529412)
(PMID:12759353), (PMID:14978112), (PMID:17012259), (PMID:20209079), (PMID:20421939), (PMID:23537644), (PMID:9182550)		 RGD
GO_Central		 PMID:7529412 PMID:9182550 PMID:12759353 PMID:12860195 PMID:14978112 More... GO_REF:0000033 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Ccl1 C-C motif chemokine ligand 1 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr10:67,625,962...67,628,740 JBrowse link
G Ccl11 C-C motif chemokine ligand 11 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr10:67,525,975...67,530,576 JBrowse link
G Ccl12 C-C motif chemokine ligand 12 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr10:67,567,876...67,569,426 JBrowse link
G Ccl17 C-C motif chemokine ligand 17 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr19:10,208,120...10,218,340 JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr 5:56,963,364...56,965,308 JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,503,077...67,504,875 JBrowse link
G Ccl20 C-C motif chemokine ligand 20 involved_in ISO (PMID:12949249), (PMID:19109182) RGD PMID:12949249 PMID:19109182 NCBI chr 9:91,837,139...91,839,736 JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr 5:56,980,557...56,981,661 JBrowse link
G Ccl22 C-C motif chemokine ligand 22 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr19:10,263,589...10,270,359 JBrowse link
G Ccl24 C-C motif chemokine ligand 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:21,100,835...21,104,832 JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr12:2,707,398...2,716,571 JBrowse link
G Ccl27 C-C motif chemokine ligand 27 involved_in ISO
IBA		 (PMID:19109182)
GO_REF:0000033		 RGD
GO_Central		 PMID:19109182 GO_REF:0000033 NCBI chr 5:56,941,402...56,948,511 JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in ISO (PMID:12538707) RGD PMID:12538707 NCBI chr 2:53,334,071...53,358,709 JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,948,889...68,950,439 JBrowse link
G Ccl4 C-C motif chemokine ligand 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,963,893...68,965,728 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,820,330...68,824,906 JBrowse link
G Ccl6 C-C motif chemokine ligand 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,380,185...68,385,859 JBrowse link
G Ccl7 C-C motif chemokine ligand 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:67,514,095...67,515,945 JBrowse link
G Ccl9 C-C motif chemokine ligand 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:68,863,994...68,868,928 JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:10,233,326...10,244,856 JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr14:17,477,542...17,479,321 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr14:15,989,066...15,991,263 JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr14:15,973,728...15,976,503 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr 4:152,060,781...152,073,628 JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr14:13,608,894...13,613,965 JBrowse link
G Cxcl14 C-X-C motif chemokine ligand 14 involved_in ISO (PMID:12949249), (PMID:19109182)
(PMID:19109182)		 RGD PMID:12949249 PMID:19109182 NCBI chr17:8,323,150...8,331,176 JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr14:17,465,210...17,467,255 JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr14:17,571,900...17,573,624 JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in ISO
IBA
IEA		 (PMID:8399143)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8399143 GO_REF:0000033 GO_REF:0000107 NCBI chr14:17,310,790...17,312,250 JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr14:16,007,166...16,012,077 JBrowse link
G Defa24 defensin alpha 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,349,550...70,350,582 JBrowse link
G Defa3 defensin alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,533,436...70,535,592 JBrowse link
G Defa31 defensin alpha 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,513,892...70,516,234 JBrowse link
G Defa5 defensin alpha 5 involved_in ISO
IBA		 (PMID:12660734), (PMID:25782105)
GO_REF:0000033		 RGD
GO_Central		 PMID:12660734 PMID:25782105 GO_REF:0000033 NCBI chr16:70,342,530...70,344,854 JBrowse link
G Defa6 defensin alpha 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,405,223...70,406,237 JBrowse link
G Defa8 defensin alpha 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,433,121...70,434,154 JBrowse link
G Defa9 defensin alpha 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,481,813...70,482,803 JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,371,492...70,372,481 JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:12860195), (PMID:25122636) RGD PMID:12860195 PMID:25122636 NCBI chr16:70,298,862...70,313,604 JBrowse link
G Defb14 defensin beta 14 involved_in ISO (PMID:11085990) RGD PMID:11085990 NCBI chr16:70,663,443...70,668,473 JBrowse link
G Defb21 defensin beta 21 involved_in ISO (PMID:15033915) RGD PMID:15033915 NCBI chr 3:141,042,810...141,044,228 JBrowse link
G Defb22 defensin beta 22 involved_in ISO (PMID:19373462) RGD PMID:19373462 NCBI chr 3:140,957,093...140,961,373 JBrowse link
G Defb4 defensin beta 4 involved_in ISO (PMID:30050988), (PMID:9727055)
(PMID:19109182)		 RGD PMID:9727055 PMID:19109182 PMID:30050988 NCBI chr16:70,650,472...70,653,665 JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:37,271,888...37,276,782 JBrowse link
G Defb5 defensin beta 5 involved_in ISO (PMID:30050988), (PMID:9727055)
(PMID:19109182)		 RGD PMID:9727055 PMID:19109182 PMID:30050988 NCBI chr16:70,612,985...70,615,389 JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 involved_in ISO (PMID:11007786) RGD PMID:11007786 NCBI chr 1:185,617,469...185,696,476 JBrowse link
G ENSRNOG00000064390 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G F2 coagulation factor II, thrombin involved_in IEA
ISO		 GO_REF:0000107
(PMID:20421939)		 Ensembl
RGD		 PMID:20421939 GO_REF:0000107 NCBI chr 3:98,051,958...98,065,246 JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) RGD PMID:18212107 NCBI chr  X:157,317,993...157,326,640 JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195)
(PMID:10496312)		 RGD PMID:10496312 PMID:12860195 NCBI chr 1:203,350,226...203,351,741 JBrowse link
G Galp galanin-like peptide involved_in ISO (PMID:23537644) RGD PMID:23537644 NCBI chr 1:76,717,110...76,741,056 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) RGD PMID:22832495 NCBI chr 4:157,962,312...157,967,158 JBrowse link
G H2bc12 H2B clustered histone 12 involved_in ISO (PMID:12860195), (PMID:15019208) RGD PMID:12860195 PMID:15019208 NCBI chr17:47,181,477...47,181,940 JBrowse link
G H2bc18 H2B clustered histone 18 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:183,838,331...183,842,769 JBrowse link
G H2bc3 H2B clustered histone 3 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,807,913...41,808,543 JBrowse link
G H2bc6 H2B clustered histone 6 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,948,813...41,949,276 JBrowse link
G H2bc8 H2B clustered histone 8 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,708,658...42,709,408 JBrowse link
G H2bc9 H2B clustered histone 9 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,470,593...42,478,590 JBrowse link
G H2bu1 H2B.U histone 1 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr10:43,732,737...43,733,484 JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO (PMID:11034317)
(PMID:11113131)		 RGD PMID:11034317 PMID:11113131 NCBI chr 1:95,298,332...95,300,271 JBrowse link
G Hist1h2bc histone cluster 1, H2bc involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,388,085...47,392,349 JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,488,627...47,489,008 JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,859,955...41,869,889 JBrowse link
G Hist2h2be histone cluster 2 H2B family member E involved_in ISO (PMID:11859126), (PMID:12860195) RGD PMID:11859126 PMID:12860195 NCBI chr 2:183,780,583...183,783,030 JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 involved_in ISO (PMID:16204630) RGD PMID:16204630 NCBI chr 5:146,192,126...146,195,580 JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
IBA		 (PMID:18797515)
GO_REF:0000033		 RGD
GO_Central		 PMID:18797515 GO_REF:0000033 NCBI chr11:78,054,488...78,069,402 JBrowse link
G Hrgl1 histidine-rich glycoprotein like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:78,039,371...78,049,353 JBrowse link
G Leap2 liver enriched antimicrobial peptide 2 involved_in ISO (PMID:12493837) RGD PMID:12493837 NCBI chr10:37,580,172...37,581,244 JBrowse link
G Lgals3 galectin 3 involved_in ISO (PMID:16982911) RGD PMID:16982911 NCBI chr15:20,620,083...20,632,019 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:15155221) RGD PMID:15155221 NCBI chr 8:110,999,948...111,022,795 JBrowse link
G Np4 defensin NP-4 precursor involved_in ISO
IBA		 (PMID:2500436)
GO_REF:0000033		 RGD
GO_Central		 PMID:2500436 GO_REF:0000033 NCBI chr16:70,494,607...70,497,261 JBrowse link
G Nppb natriuretic peptide B involved_in ISO (PMID:11410403) RGD PMID:11410403 NCBI chr 5:163,699,955...163,701,314 JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:80,212,111...80,219,310 JBrowse link
G Pf4 platelet factor 4 involved_in ISO
IBA		 (PMID:10877842)
GO_REF:0000033
(PMID:23245326)		 RGD
GO_Central		 PMID:10877842 PMID:23245326 GO_REF:0000033 NCBI chr14:17,582,477...17,583,392 JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in ISO (PMID:16354652) RGD PMID:16354652 NCBI chr 1:78,531,815...78,537,001 JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 involved_in ISO (PMID:16354652) RGD PMID:16354652 NCBI chr 2:177,479,693...177,490,769 JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 involved_in ISO (PMID:16354652) RGD PMID:16354652 NCBI chr 2:176,202,654...176,322,859 JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO
IEA		 (PMID:12860195)
GO_REF:0000107		 RGD
Ensembl		 PMID:12860195 GO_REF:0000107 NCBI chr12:46,802,932...46,814,511 JBrowse link
G Ppbp pro-platelet basic protein involved_in ISO (PMID:10877842) RGD PMID:10877842 NCBI chr14:17,586,495...17,587,299 JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,544,364...70,546,533 JBrowse link
G Reg1a regenerating family member 1 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:112,450,466...112,453,130 JBrowse link
G Reg3a regenerating islet-derived 3 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:110,872,398...110,875,157 JBrowse link
G Reg3b regenerating family member 3 beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:110,861,775...110,865,015 JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO
IBA		 (PMID:16931762)
GO_REF:0000033		 RGD
GO_Central		 PMID:16931762 GO_REF:0000033 NCBI chr 4:110,922,805...110,927,803 JBrowse link
G Rnase3 ribonuclease A family member 3 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr15:24,511,894...24,512,764 JBrowse link
G Rnase6 ribonuclease A family member 6 involved_in ISO
IBA		 (PMID:25075772)
GO_REF:0000033		 RGD
GO_Central		 PMID:25075772 GO_REF:0000033 NCBI chr15:26,827,896...26,830,807 JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) RGD PMID:22083756 NCBI chr 3:165,119,794...165,121,394 JBrowse link
G Rpl30 ribosomal protein L30 involved_in ISO (PMID:15019208) RGD PMID:15019208 NCBI chr 7:67,533,420...67,536,555 JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:121,192,901...121,195,896 JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15019208) RGD PMID:15019208 NCBI chr 1:80,480,718...80,486,511 JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in IEA
IBA		 GO_REF:0000107
GO_REF:0000033		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:178,487,941...178,490,622 JBrowse link
G Spag11b sperm associated antigen 11B involved_in ISO (PMID:16411022) RGD PMID:16411022 NCBI chr16:70,697,810...70,700,336 JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:36,645,344...36,653,548 JBrowse link
G Tslp thymic stromal lymphopoietin involved_in ISO (PMID:24850429) RGD PMID:24850429 NCBI chr18:24,723,990...24,728,419 JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:44,470,232...44,478,561 JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO
IBA		 (PMID:12949249)
GO_REF:0000033		 RGD
GO_Central		 PMID:12949249 GO_REF:0000033 NCBI chr13:79,781,784...79,785,440 JBrowse link
antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:1861796 (PMID:9009202) RGD PMID:9009202 NCBI chr 1:79,471,368...79,485,908 JBrowse link
G Colec11 collectin sub-family member 11 involved_in ISO (PMID:20956340) RGD PMID:20956340 NCBI chr 6:45,223,974...45,256,640 JBrowse link
G Cst9l cystatin 9-like involved_in IBA
ISO		 GO_REF:0000033
(PMID:23922243)		 GO_Central
RGD		 PMID:23922243 GO_REF:0000033 NCBI chr 3:136,288,093...136,290,906 JBrowse link
G Cstdc2 cystatin domain containing 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:136,302,588...136,336,782 JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31522117)		 UniProt
Ensembl
RGD		 PMID:31522117 GO_REF:0000024 GO_REF:0000107 NCBI chr10:74,118,232...74,151,366 JBrowse link
G Atad3a ATPase family, AAA domain containing 3A involved_in ISO
ISS		 (PMID:31522117)
GO_REF:0000024		 RGD
UniProt		 PMID:31522117 GO_REF:0000024 NCBI chr 5:171,632,545...171,652,725 JBrowse link
G Clpb ClpB family mitochondrial disaggregase involved_in ISO
IEA		 (PMID:31522117)
GO_REF:0000107		 RGD
Ensembl		 PMID:31522117 GO_REF:0000107 NCBI chr 1:156,028,740...156,158,183 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr14:15,989,066...15,991,263 JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in ISO (PMID:24990078)
(PMID:26494172), (PMID:34678144)		 RGD PMID:24990078 PMID:26494172 PMID:34678144 NCBI chr14:58,787,147...58,825,083 JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO (PMID:35263596) RGD PMID:35263596 NCBI chr20:2,862,000...2,874,991 JBrowse link
G Dhx58 DEXH-box helicase 58 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,620,352...85,631,776 JBrowse link
G Dus2 dihydrouridine synthase 2 involved_in ISO UniProtKB:P19525 (PMID:18096616) RGD PMID:18096616 NCBI chr19:33,906,517...33,954,922 JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:22948139)		 Ensembl
RGD		 PMID:22948139 GO_REF:0000107 NCBI chr 6:21,941,147...21,977,115 JBrowse link
G Hcfc2 host cell factor C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5445585 (PMID:28970238)		 Ensembl
RGD		 PMID:28970238 GO_REF:0000107 NCBI chr 7:20,983,986...21,019,826 JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3663677 (PMID:28031478)		 GO_Central
RGD		 PMID:28031478 GO_REF:0000033 NCBI chr 3:67,635,924...67,683,968 JBrowse link
G Ifit2 interferon-induced protein with tetratricopeptide repeats 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:19416887)
(PMID:31390091)		 RGD PMID:19416887 PMID:31390091 NCBI chr 1:241,515,735...241,521,799 JBrowse link
G Ifit3 interferon-induced protein with tetratricopeptide repeats 3 involved_in ISO (PMID:21642987) RGD PMID:21642987 NCBI chr 1:232,114,166...232,119,311 JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:9891032) RGD PMID:9891032 NCBI chr 1:104,616,608...104,621,402 JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32935379)		 UniProt
RGD		 PMID:32935379 GO_REF:0000024 NCBI chr 7:14,480,605...14,507,821 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:27992402) RGD PMID:27992402 NCBI chr 3:118,451,650...118,466,094 JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:35102342) RGD PMID:35102342 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G Morc3 MORC family CW-type zinc finger 3 involved_in ISO (PMID:27440897) RGD PMID:27440897 NCBI chr11:33,151,906...33,194,650 JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:18835251) RGD PMID:18835251 NCBI chr 8:109,897,723...109,958,247 JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in ISO (PMID:33093214) RGD PMID:33093214 NCBI chr10:55,778,560...55,833,639 JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:26494172), (PMID:34678144)
GO_REF:0000107
(PMID:34161762)		 UniProt
RGD
Ensembl		 PMID:26494172 PMID:34161762 PMID:34678144 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:196,004,854...196,011,615 JBrowse link
G Nmb neuromedin B involved_in ISO (PMID:31601264) RGD PMID:31601264 NCBI chr 1:134,869,446...134,875,507 JBrowse link
G Nmbr neuromedin B receptor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31601264)		 UniProt
Ensembl
RGD		 PMID:31601264 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:9,115,033...9,146,081 JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,669,798...35,680,505 JBrowse link
G Oas1b 2-5 oligoadenylate synthetase 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,724,561...35,735,271 JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,648,583...35,658,037 JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,750,359...35,759,304 JBrowse link
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,682,862...35,695,717 JBrowse link
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,624,566...35,636,608 JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,802,824...35,830,778 JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:35,779,028...35,802,781 JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,682,900...41,695,641 JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:41,710,072...41,722,687 JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:36943869) RGD PMID:36943869 NCBI chr19:28,236,713...28,279,815 JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO
IEA		 (PMID:15231837)
GO_REF:0000107		 RGD
Ensembl		 PMID:15231837 GO_REF:0000107 NCBI chr16:1,920,062...1,925,638 JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:31522117) RGD PMID:31522117 NCBI chr10:81,102,043...81,114,815 JBrowse link
G Phb2 prohibitin 2 involved_in ISO
IEA		 (PMID:31522117)
GO_REF:0000107		 RGD
Ensembl		 PMID:31522117 GO_REF:0000107 NCBI chr 4:157,517,662...157,522,268 JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26454002)		 Ensembl
RGD		 PMID:26454002 GO_REF:0000107 NCBI chr 3:61,575,447...61,594,393 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:38114488) RGD PMID:38114488 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Rig1 RNA sensor RIG-1 involved_in ISO
IBA		 (PMID:28469175)
GO_REF:0000033		 RGD
GO_Central		 PMID:28469175 GO_REF:0000033 NCBI chr 5:55,321,351...55,369,947 JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO
ISS		 (PMID:28469175), (PMID:31006531)
(PMID:21147464), (PMID:23950712)
GO_REF:0000024		 RGD
UniProt		 PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 GO_REF:0000024 NCBI chr10:65,170,560...65,189,791 JBrowse link
G Rpsa ribosomal protein SA involved_in ISO (PMID:38114488) RGD PMID:38114488 NCBI chr 8:128,728,761...128,732,736 JBrowse link
G Senp7 SUMO specific peptidase 7 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:28095500)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:28095500 GO_REF:0000024 GO_REF:0000107 NCBI chr11:44,423,733...44,584,129 JBrowse link
G Serinc3 serine incorporator 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26416733), (PMID:26416734), (PMID:37474505)		 Ensembl
RGD		 PMID:26416733 PMID:26416734 PMID:37474505 GO_REF:0000107 NCBI chr 3:152,301,882...152,321,327 JBrowse link
G Serinc5 serine incorporator 5 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:26416733), (PMID:26416734), (PMID:37474505)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:26416733 PMID:26416734 PMID:37474505 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:25,581,952...25,685,403 JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 involved_in ISO (PMID:38114488) RGD PMID:38114488 NCBI chr19:44,172,465...44,208,967 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IEA		 (PMID:21074459)
GO_REF:0000107		 RGD
Ensembl		 PMID:21074459 GO_REF:0000107 NCBI chr18:27,606,196...27,612,544 JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:14703513), (PMID:22394562) RGD PMID:14703513 PMID:22394562 NCBI chr 7:58,963,319...58,996,357 JBrowse link
G Tmem120a transmembrane protein 120A involved_in ISO
IEA		 (PMID:35013224)
GO_REF:0000107		 RGD
Ensembl		 PMID:35013224 GO_REF:0000107 NCBI chr12:20,942,243...20,950,908 JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:11773383) RGD PMID:11773383 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 acts_upstream_of_or_within ISO MGI:5795738 (PMID:31390091) RGD PMID:31390091 NCBI chr13:107,223,499...107,248,358 JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO
IEA		 (PMID:18984593)
GO_REF:0000107		 RGD
Ensembl		 PMID:18984593 GO_REF:0000107 NCBI chr 3:87,963,517...87,988,316 JBrowse link
G Trim21 tripartite motif-containing 21 involved_in ISO (PMID:36943869) RGD PMID:36943869 NCBI chr 1:156,964,896...156,987,504 JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO (PMID:17392790) RGD PMID:17392790 NCBI chr10:74,310,024...74,328,473 JBrowse link
G Trim31 tripartite motif-containing 31 involved_in ISO (PMID:27992402) RGD PMID:27992402 NCBI chr20:1,653,165...1,666,494 JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:35263596) RGD PMID:35263596 NCBI chr 1:158,683,746...158,696,936 JBrowse link
G Trim65 tripartite motif-containing 65 acts_upstream_of_or_within ISO MGI:6356825|MGI:6356826|MGI:6356827 (PMID:28031478) RGD PMID:28031478 NCBI chr10:101,357,937...101,364,036 JBrowse link
G Trim7 tripartite motif-containing 7 involved_in ISO (PMID:35893676) RGD PMID:35893676 NCBI chr10:33,205,491...33,221,482 JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 involved_in ISO (PMID:36603579) RGD PMID:36603579 NCBI chr13:82,342,946...82,377,558 JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO (PMID:35893676) RGD PMID:35893676 NCBI chr 7:30,154,330...30,184,373 JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in ISO (PMID:35893676) RGD PMID:35893676 NCBI chr 5:2,690,742...2,754,491 JBrowse link
G Ubl7 ubiquitin-like 7 involved_in ISO (PMID:36943869) RGD PMID:36943869 NCBI chr 8:58,321,279...58,340,353 JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:27801882) RGD PMID:27801882 NCBI chr 4:154,471,634...154,499,154 JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:27801882) RGD PMID:27801882 NCBI chr 3:14,272,737...14,306,409 JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (PMID:31968013) RGD PMID:31968013 NCBI chr 7:28,364,169...28,412,039 JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:34192517) RGD PMID:34192517 NCBI chr 3:161,993,351...162,009,297 JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 involved_in ISO
IBA		 (PMID:25299331)
GO_REF:0000033		 RGD
GO_Central		 PMID:25299331 GO_REF:0000033 NCBI chr19:33,350,533...33,375,717 JBrowse link
G Zdhhc11 zinc finger, DHHC-type containing 11 involved_in ISO
IBA		 (PMID:29429998)
GO_REF:0000033		 RGD
GO_Central		 PMID:29429998 GO_REF:0000033 NCBI chr 1:31,124,900...31,156,075 JBrowse link
biological process involved in interaction with host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pglyrp1 peptidoglycan recognition protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2670590 (PMID:20709292)		 Ensembl
RGD		 PMID:20709292 GO_REF:0000107 NCBI chr 1:78,531,815...78,537,001 JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 acts_upstream_of_or_within ISO MGI:5297105 (PMID:20709292) RGD PMID:20709292 NCBI chr 7:11,418,674...11,432,162 JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 acts_upstream_of_or_within ISO MGI:5297106 (PMID:20709292) RGD PMID:20709292 NCBI chr 2:177,479,693...177,490,769 JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 acts_upstream_of_or_within ISO MGI:5297107 (PMID:20709292) RGD PMID:20709292 NCBI chr 2:176,202,654...176,322,859 JBrowse link
biological process involved in interaction with symbiont term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cysrt1 cysteine rich tail 1 involved_in ISO (PMID:36804407) RGD PMID:36804407 NCBI chr 3:28,452,359...28,456,006 JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA		 (PMID:23137809)
GO_REF:0000107		 RGD
Ensembl		 PMID:23137809 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685 JBrowse link
G Fn1 fibronectin 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:80,645,507...80,714,200 JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104887|MGI:106609 (PMID:12751789)		 Ensembl
RGD		 PMID:12751789 GO_REF:0000107 NCBI chr 8:117,905,462...117,906,588 JBrowse link
G Gpx2 glutathione peroxidase 2 acts_upstream_of_or_within ISO MGI:104887|MGI:106609 (PMID:12751789) RGD PMID:12751789 NCBI chr 6:101,226,745...101,230,033 JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:9,817,251...9,819,174 JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of ISO MGI:3529594 (PMID:15692051) RGD PMID:15692051 NCBI chr19:34,555,832...34,596,281 JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:15294986) RGD PMID:15294986 NCBI chr18:28,609,558...28,611,409 JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within
involved_in		 ISO (PMID:12719478)
(PMID:19358895)		 RGD PMID:12719478 PMID:19358895 NCBI chr 4:162,902,731...162,913,931 JBrowse link
G Fcna ficolin A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:8,445,904...8,449,128 JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:21037097) RGD PMID:21037097 NCBI chr 3:11,393,713...11,402,198 JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISO
ISS		 (PMID:21037097)
GO_REF:0000024		 RGD
UniProt		 PMID:21037097 GO_REF:0000024 NCBI chr 1:95,199,277...95,202,599 JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO
IEA		 (PMID:15294986)
GO_REF:0000107		 RGD
Ensembl		 PMID:15294986 GO_REF:0000107 NCBI chr 3:146,953,889...146,981,032 JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:22966085) RGD PMID:22966085 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO
IEA		 (PMID:19358895)
GO_REF:0000107		 RGD
Ensembl		 PMID:19358895 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927 JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2178675 (PMID:12719478) RGD PMID:12719478 NCBI chr 2:171,499,189...171,504,831 JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:3573941 (PMID:15690042) RGD PMID:15690042 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr15:92,180,912...92,180,993 JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr15:92,181,214...92,181,300 JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr  X:132,422,072...132,422,167 JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (PMID:15690042) RGD PMID:15690042 NCBI chr 8:41,789,557...41,805,903 JBrowse link
G Tlr10 toll-like receptor 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:43,758,940...43,768,352 JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2674036 (PMID:15690042) RGD PMID:15690042 NCBI chr 2:171,499,189...171,504,831 JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISS
ISO		 GO_REF:0000024
(PMID:16880211)		 UniProt
RGD		 PMID:16880211 GO_REF:0000024 NCBI chr18:28,609,558...28,611,409 JBrowse link
G Cd36 CD36 molecule involved_in ISO
IEA
ISS		 (PMID:16880211)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16880211 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd36l1 CD36 molecule like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:17,424,749...17,465,808 JBrowse link
G LOC134486712 platelet glycoprotein 4-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Mir105 microRNA 105 involved_in ISO (PMID:19509287) RGD PMID:19509287 NCBI chr  X:150,438,529...150,438,601 JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:16880211)
(PMID:19931471)		 RGD PMID:16880211 PMID:19931471 NCBI chr 2:171,499,189...171,504,831 JBrowse link
G Tlr6 toll-like receptor 6 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16880211)
GO_REF:0000033
(PMID:19931471)		 RGD
GO_Central		 PMID:16880211 PMID:19931471 GO_REF:0000033 NCBI chr14:43,715,809...43,727,019 JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:19752193) RGD PMID:19752193 NCBI chr 5:72,473,676...72,596,563 JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20300455 RGD:39456124 NCBI chr 4:26,312,403...26,488,456 JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:20702406 RGD:11081005 NCBI chr 1:252,613,875...252,672,459 JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1856663 (PMID:8806812) RGD PMID:8806812 NCBI chr 3:35,377,587...35,480,843 JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450), (PMID:23610393), (PMID:35662396) RGD PMID:23609450 PMID:23610393 PMID:35662396 NCBI chr15:79,871,819...79,881,101 JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr16:73,725,186...73,804,284 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:22871409 RGD:7207038 NCBI chr 3:10,299,264...10,338,464 JBrowse link
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 4:157,446,120...157,455,958 JBrowse link
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:18717813 RGD:2313015 NCBI chr20:3,651,435...3,657,341 JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (PMID:19531803) RGD PMID:19531803 NCBI chr 7:11,316,224...11,332,523 JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO
IEA		 (PMID:7730328)
(PMID:17239933)
GO_REF:0000107		 RGD
Ensembl		 PMID:7730328 PMID:17239933 GO_REF:0000107 NCBI chr 1:233,815,851...233,834,891 JBrowse link
G Arg1 arginase 1 IEP RGD PMID:9013624 RGD:4144055 NCBI chr 1:22,295,093...22,307,720 JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:103,669,001...103,694,375 JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:27671645) RGD PMID:27671645 NCBI chr 9:38,534,612...38,549,467 JBrowse link
G Ass1 argininosuccinate synthase 1 IEP alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 3:14,747,355...14,796,909 JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:19657094) RGD PMID:19657094 NCBI chr 1:90,392,864...90,424,123 JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:129,549,236...129,555,354 JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO		 GO_REF:0000024
(PMID:16831874)		 UniProt
RGD		 PMID:16831874 GO_REF:0000024 NCBI chr 2:237,501,181...237,510,821 JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (PMID:7889565) RGD PMID:7889565 NCBI chr20:13,468,732...13,596,333 JBrowse link
G Bysl bystin-like IEP RGD PMID:15305856 RGD:2316201 NCBI chr 9:13,382,806...13,392,557 JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:8,391,396...8,397,219 JBrowse link
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 PMID:26527065 PMID:29396644 RGD:2316237, RGD:435861584, RGD:408427365 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:96,681,902...96,732,625 JBrowse link
G Casp1 caspase 1 involved_in ISO (PMID:11536016), (PMID:22464733) RGD PMID:11536016 PMID:22464733 NCBI chr 8:10,746,338...10,882,295 JBrowse link
G Casp7 caspase 7 involved_in ISO (PMID:22464733) RGD PMID:22464733 NCBI chr 1:265,442,647...265,481,938 JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO		 (PMID:14662900) RGD PMID:14662900 PMID:8921263 RGD:8549522 NCBI chr10:67,503,077...67,504,875 JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:91,837,139...91,839,736 JBrowse link
G Ccl27 C-C motif chemokine ligand 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,941,402...56,948,511 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:68,820,330...68,824,906 JBrowse link
G Ccr5 C-C motif chemokine receptor 5 involved_in ISO (PMID:10679098) RGD PMID:10679098 NCBI chr 8:132,629,097...132,660,980 JBrowse link
G Cd14 CD14 molecule involved_in
acts_upstream_of_or_within		 IEP
ISO
IBA
ISS		 (PMID:24380872), (PMID:8612135)
GO_REF:0000033
(PMID:12594207)
(PMID:8612135)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:8612135 PMID:12594207 PMID:24380872 PMID:22511970 GO_REF:0000024 GO_REF:0000033, RGD:7183752 NCBI chr18:28,609,558...28,611,409 JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3581654 (PMID:10880523)		 GO_Central
RGD		 PMID:10880523 GO_REF:0000033 NCBI chr 2:33,855,940...33,870,046 JBrowse link
G Cd274 CD274 molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:236,526,215...236,549,956 JBrowse link
G Cd300lb CD300 molecule-like family member b acts_upstream_of_or_within ISO MGI:4829592 (PMID:22772446) RGD PMID:22772446 NCBI chr10:99,964,801...99,974,790 JBrowse link
G Cd36 CD36 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2447190 (PMID:16061696)		 Ensembl
RGD		 PMID:16061696 GO_REF:0000107 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd40 CD40 molecule IEP RGD PMID:19271152 RGD:5491178 NCBI chr 3:174,209,113...174,224,592 JBrowse link
G Cd68 Cd68 molecule involved_in ISO (PMID:16157452) RGD PMID:16157452 NCBI chr10:54,880,562...54,882,441 JBrowse link
G Cd80 Cd80 molecule involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:19047410)		 GO_Central
RGD		 PMID:19047410 GO_REF:0000033 NCBI chr11:75,760,073...75,798,978 JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within
involved_in		 IEP
ISO
IBA		 (PMID:19047410)
GO_REF:0000033		 RGD
GO_Central		 PMID:19047410 PMID:21039614 GO_REF:0000033, RGD:4892198 NCBI chr11:77,647,565...77,706,178 JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17911113)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17911113 GO_REF:0000024 GO_REF:0000107 NCBI chr13:55,357,226...55,449,690 JBrowse link
G Cdk19 cyclin-dependent kinase 19 IEP RGD PMID:20066559 RGD:9590278 NCBI chr20:45,324,911...45,465,121 JBrowse link
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO (PMID:8543804) RGD PMID:8543804 NCBI chr 7:64,771,453...64,774,891 JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IDA RGD PMID:18405661 RGD:10401220 NCBI chr 3:176,817,005...176,818,436 JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon IEP RGD PMID:9593684 RGD:728287 NCBI chr15:28,169,711...28,171,471 JBrowse link
G Cfh complement factor H acts_upstream_of_or_within IEP
ISO		 (PMID:19828624) RGD PMID:19828624 PMID:12121434 RGD:632369 NCBI chr13:51,512,376...51,613,829 JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO
ISS		 (PMID:27812135)
GO_REF:0000024		 RGD
UniProt		 PMID:27812135 GO_REF:0000024 NCBI chr 5:60,877,369...60,894,512 JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (PMID:7751651) RGD PMID:7751651 NCBI chr 6:48,802,150...48,813,652 JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEP RGD PMID:21620800 RGD:9685153 NCBI chr 1:144,709,278...144,817,388 JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) RGD PMID:19828624 NCBI chr13:109,207,034...109,244,980 JBrowse link
G Csf2 colony stimulating factor 2 IEP RGD PMID:18387647 RGD:5131517 NCBI chr10:38,887,692...38,889,673 JBrowse link
G Csf3 colony stimulating factor 3 IEP RGD PMID:19732808 RGD:5133735 NCBI chr10:84,157,485...84,159,860 JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:17911113) RGD PMID:17911113 NCBI chr 1:174,571,952...174,601,974 JBrowse link
G Ctsg cathepsin G involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:33,901,230...33,907,596 JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEP
ISO		 UniProtKB:P05067 (PMID:23499256) RGD PMID:23499256 PMID:10422773 RGD:4892028 NCBI chr 8:128,661,294...128,679,048 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:23776175)
GO_REF:0000033		 RGD
GO_Central		 PMID:23776175 GO_REF:0000033 NCBI chr14:15,989,066...15,991,263 JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:13,608,894...13,613,965 JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (PMID:11017100) RGD PMID:11017100 NCBI chr10:55,166,721...55,171,316 JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP RGD PMID:16239643 RGD:5135237 NCBI chr14:17,465,210...17,467,255 JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 IEP RGD PMID:10738946 RGD:5135239 NCBI chr14:17,571,900...17,573,624 JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in IEP
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:8399143)		 GO_Central
Ensembl
RGD		 PMID:8399143 PMID:15778492 GO_REF:0000033 GO_REF:0000107, RGD:5135262 NCBI chr14:17,310,790...17,312,250 JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:16,007,166...16,012,077 JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 8:67,318,665...67,330,196 JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 1:245,535,462...245,543,148 JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19948740)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19948740 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282 JBrowse link
G Defa24 defensin alpha 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,349,550...70,350,582 JBrowse link
G Defa3 defensin alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,533,436...70,535,592 JBrowse link
G Defa31 defensin alpha 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,513,892...70,516,234 JBrowse link
G Defa5 defensin alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,342,530...70,344,854 JBrowse link
G Defa6 defensin alpha 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,405,223...70,406,237 JBrowse link
G Defa8 defensin alpha 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,433,121...70,434,154 JBrowse link
G Defa9 defensin alpha 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,481,813...70,482,803 JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,371,492...70,372,481 JBrowse link
G Ednrb endothelin receptor type B IEP RGD PMID:18091567 RGD:4892289 NCBI chr15:87,055,490...87,086,765 JBrowse link
G Efnb2 ephrin B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr16:80,783,389...80,827,420 JBrowse link
G ENSRNOG00000064390 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 1:239,425,515...239,552,323 JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 3:28,611,722...28,617,237 JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:12099714 RGD:11041576 NCBI chr 6:13,543,252...13,626,147 JBrowse link
G Ephb2 Eph receptor B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr 5:154,179,065...154,360,459 JBrowse link
G Epsti1 epithelial stromal interaction 1 acts_upstream_of_or_within ISO (PMID:29217193) RGD PMID:29217193 NCBI chr15:59,692,712...59,791,376 JBrowse link
G Esr2 estrogen receptor 2 IMP negative regulation of cell death RGD PMID:21127968 RGD:5508811 NCBI chr 6:100,589,553...100,645,240 JBrowse link
G Fcar Fc alpha receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:69,626,458...69,660,558 JBrowse link
G Fcgr2b Fc gamma receptor 2B IEP RGD PMID:19106808 RGD:5147925 NCBI chr13:85,725,897...85,740,517 JBrowse link
G Fcgr3a Fc gamma receptor 3A IDA RGD PMID:19106808 RGD:5147925 NCBI chr13:85,782,636...85,792,656 JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:30250515 RGD:25330356 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:11819312 RGD:7205475 NCBI chr 9:80,645,507...80,714,200 JBrowse link
G Fubp1 far upstream element binding protein 1 IEP RGD PMID:23797733 RGD:13673879 NCBI chr 2:243,819,529...243,846,544 JBrowse link
G Gata1 GATA binding protein 1 IDA RGD PMID:17687519 RGD:5131526 NCBI chr  X:14,529,706...14,537,530 JBrowse link
G Gbp1 guanylate binding protein 1 involved_in ISO (PMID:24715728) RGD PMID:24715728 NCBI chr 2:234,071,366...234,106,012 JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
(PMID:24715728)
(PMID:18025219)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18025219 PMID:24715728 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:234,005,727...234,021,812 JBrowse link
G Gbp4 guanylate binding protein 4 involved_in ISO (PMID:24715728) RGD PMID:24715728 NCBI chr 2:231,304,910...231,318,883 JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:24715728) RGD PMID:24715728 NCBI chr 2:231,237,748...231,257,071 JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:13,718,489...13,721,782 JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO
IEA		 (PMID:20547752)
GO_REF:0000107		 RGD
Ensembl		 PMID:20547752 GO_REF:0000107 NCBI chr14:2,185,489...2,204,191 JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:15155262 RGD:12905047 NCBI chr 2:110,268,489...110,271,865 JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:32460388)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,342,082...62,356,379 JBrowse link
G Grk6 G protein-coupled receptor kinase 6 IEP RGD PMID:23359120 RGD:13792782 NCBI chr17:9,182,160...9,198,380 JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16023107)		 BHF-UCL
RGD		 PMID:16023107 GO_REF:0000024 NCBI chr 1:210,767,237...210,770,242 JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IEA
ISO		 GO_REF:0000107
(PMID:32513690)		 Ensembl
RGD		 PMID:32513690 GO_REF:0000107 NCBI chr 6:31,873,404...31,907,557 JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:23506423 RGD:11041627 NCBI chr 1:95,298,332...95,300,271 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:25337993) RGD PMID:25337993 NCBI chr10:30,882,484...30,914,018 JBrowse link
G Hdac5 histone deacetylase 5 IEP RGD PMID:22933299 RGD:9590257 NCBI chr10:87,152,978...87,187,921 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:19940979 RGD:5147884 NCBI chr 6:98,357,788...98,405,068 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:28096568) RGD PMID:28096568 NCBI chr12:11,009,236...11,015,941 JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) RGD PMID:19811285 NCBI chr16:37,721,374...37,723,950 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11578593 RGD:1599044 NCBI chr 2:185,875,609...185,903,505 JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEP RGD PMID:14597422 RGD:10054261 NCBI chr 7:14,438,703...14,476,781 JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:21540803 RGD:10402943 NCBI chr 7:110,076,710...110,103,665 JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20674665 RGD:4145373 NCBI chr 8:27,829,688...27,841,618 JBrowse link
G Ifnb1 interferon beta 1 IEP RGD PMID:18412159 RGD:401854236 NCBI chr 5:108,066,650...108,067,487 JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:18791161) RGD PMID:18791161 NCBI chr 7:55,789,180...55,793,216 JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within		 ISO (PMID:23071313)
(PMID:19047410), (PMID:21609717)		 RGD PMID:19047410 PMID:21609717 PMID:23071313 NCBI chr13:45,024,921...45,029,586 JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:19047410) RGD PMID:19047410 NCBI chr 2:155,275,734...155,282,997 JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219), (PMID:21606371) RGD PMID:18025219 PMID:21606371 NCBI chr10:29,390,300...29,405,194 JBrowse link
G Il18 interleukin 18 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11739527 GO_REF:0000033, RGD:729357 NCBI chr 8:59,802,072...59,829,275 JBrowse link
G Il1a interleukin 1 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:136,979,804...136,990,236 JBrowse link
G Il1b interleukin 1 beta involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:23200736 GO_REF:0000033, RGD:7175528 NCBI chr 3:137,030,200...137,036,581 JBrowse link
G Il1f10 interleukin 1 family member 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:7,072,511...7,075,439 JBrowse link
G Il24 interleukin 24 IEP RGD PMID:12182458 RGD:5147432 NCBI chr13:44,905,362...44,910,760 JBrowse link
G Il36a interleukin 36, alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:6,996,851...7,001,400 JBrowse link
G Il36b interleukin 36, beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:7,024,881...7,030,388 JBrowse link
G Il36g interleukin 36, gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,346,675...27,352,839 JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:7,044,419...7,051,016 JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within IEP
ISO		 (PMID:19047410), (PMID:21606371)
(PMID:23776175)		 RGD PMID:19047410 PMID:21606371 PMID:23776175 PMID:2789217 RGD:11049548 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP RGD PMID:15793310 RGD:1579809 NCBI chr  X:156,919,927...156,929,825 JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:21606371) RGD PMID:21606371 NCBI chr 1:104,616,608...104,621,402 JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO MGI:1926332 (PMID:9348310) RGD PMID:9348310 NCBI chr19:48,790,581...48,812,363 JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,233,513...33,241,594 JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (PMID:21606371) RGD PMID:21606371 NCBI chr 1:236,408,905...236,468,769 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:115,009,900...115,012,993 JBrowse link
G Klrk1 killer cell lectin like receptor K1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:14764662)		 Ensembl
RGD		 PMID:14764662 GO_REF:0000107 NCBI chr 4:163,079,887...163,092,434 JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:26524415 RGD:13703043 NCBI chr13:90,089,340...90,121,108 JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:24380872)
(PMID:12594207)
(PMID:24120359)		 UniProt
RGD		 PMID:12594207 PMID:24120359 PMID:24380872 GO_REF:0000024 NCBI chr 3:146,953,889...146,981,032 JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:19329498 RGD:2316495 NCBI chr 3:36,078,432...36,081,851 JBrowse link
G Ldoc1 LDOC1, regulator of NFKB signaling involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr  X:139,965,509...140,074,355 JBrowse link
G Litaf lipopolysaccharide-induced TNF factor acts_upstream_of_or_within ISO MGI:3687962 (PMID:16954198) RGD PMID:16954198 NCBI chr10:4,656,308...4,692,981 JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:9794912 RGD:2316634 NCBI chr10:35,060,002...35,066,466 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO
IBA		 (PMID:24380872)
GO_REF:0000033		 RGD
GO_Central		 PMID:24380872 GO_REF:0000033 NCBI chr 5:7,365,536...7,397,864 JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (PMID:16831874) RGD PMID:16831874 NCBI chr18:61,212,290...61,266,272 JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 IDA RGD PMID:14670949 RGD:7495812 NCBI chr10:46,107,639...46,128,986 JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:9405446)		 Ensembl
RGD		 PMID:9405446 GO_REF:0000107 NCBI chr12:7,389,032...7,398,377 JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23776175)
GO_REF:0000107		 RGD
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr16:8,645,171...8,728,225 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEP RGD PMID:9475517 RGD:2304245 NCBI chr10:34,670,750...34,711,972 JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(PMID:18955699)		 UniProt
RGD		 PMID:18955699 GO_REF:0000024 NCBI chr 2:15,708,732...15,871,639 JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:232,337,767...232,337,853 JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr10:81,283,171...81,283,280 JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:58,677,626...58,677,710 JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:24415783) RGD PMID:24415783 NCBI chr13:39,699,449...39,699,530 JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:24415783) RGD PMID:24415783 NCBI chr 8:112,085,467...112,085,550 JBrowse link
G Mir139 microRNA 139 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 1:155,878,828...155,878,895 JBrowse link
G Mir140 microRNA 140 involved_in
acts_upstream_of_or_within		 ISO (PMID:30321456)
(PMID:18762567)		 RGD PMID:18762567 PMID:30321456 NCBI chr19:52,375,293...52,375,391 JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (PMID:21536037) RGD PMID:21536037 NCBI chr10:72,557,864...72,557,950 JBrowse link
G Mir146a microRNA 146a involved_in
acts_upstream_of_or_within		 ISO (PMID:16885212)
(PMID:18791161), (PMID:21247879)		 RGD PMID:16885212 PMID:18791161 PMID:21247879 NCBI chr10:28,349,996...28,350,090 JBrowse link
G Mir146b microRNA 146b acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 1:245,203,438...245,203,525 JBrowse link
G Mir147 microRNA 147 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 3:109,722,692...109,722,770 JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr 1:95,605,024...95,605,108 JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr11:37,261,114...37,261,178 JBrowse link
G Mir16-2 microRNA 16-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 2:153,245,349...153,245,443 JBrowse link
G Mir181a2 microRNA 181a-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:22,615,845...22,615,961 JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:22,616,948...22,617,035 JBrowse link
G Mir181c microRNA 181c acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr19:23,983,523...23,983,628 JBrowse link
G Mir182 microRNA 182 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 4:58,784,818...58,784,879 JBrowse link
G Mir184 microRNA 184 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 8:90,343,134...90,343,210 JBrowse link
G Mir187 microRNA 187 involved_in ISO (PMID:23071313) RGD PMID:23071313 NCBI chr18:15,731,194...15,731,297 JBrowse link
G Mir193a microRNA 193a acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr10:64,672,343...64,672,454 JBrowse link
G Mir194-1 microRNA 194-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:96,851,166...96,851,248 JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:203,564,761...203,564,845 JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:2676863 (PMID:21247879) RGD PMID:21247879 NCBI chr13:74,582,954...74,583,063 JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir202 microRNA 202 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:194,754,730...194,754,801 JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:105,035,878...105,035,985 JBrowse link
G Mir21 microRNA 21 involved_in IEP
ISO		 (PMID:19946272), (PMID:29039542) RGD PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr10:71,902,600...71,902,691 JBrowse link
G Mir210 microRNA 210 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 1:196,326,343...196,326,452 JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr14:102,531,505...102,531,609 JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within
involved_in		 IEP
ISO		 (PMID:18762567), (PMID:18791161), (PMID:21247879)
(PMID:34637033)		 RGD PMID:18762567 PMID:18791161 PMID:21247879 PMID:34637033 PMID:29707878 RGD:25823197 NCBI chr  X:61,141,887...61,141,996 JBrowse link
G Mir224 microRNA 224 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr  X:150,065,088...150,065,169 JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr17:1,813,667...1,813,763 JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr19:23,954,683...23,954,790 JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 8:118,755,289...118,755,378 JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 9:75,976,596...75,976,680 JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr19:23,954,831...23,954,917 JBrowse link
G Mir293 microRNA 293 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:65,963,050...65,963,121 JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 4:60,617,955...60,618,042 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 4:60,618,334...60,618,414 JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:106,570,371...106,570,451 JBrowse link
G Mir30b microRNA 30b acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 7:102,021,543...102,021,629 JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 5:134,349,237...134,349,325 JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 9:25,757,342...25,757,425 JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 7:100,136,391...100,136,472 JBrowse link
G Mir323 microRNA 323 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:128,725,539...128,725,624 JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr 6:127,565,269...127,565,367 JBrowse link
G Mir345 microRNA 345 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:127,754,027...127,754,122 JBrowse link
G Mir381 microRNA 381 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:128,740,976...128,741,036 JBrowse link
G Mir383 microRNA 383 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr16:54,040,340...54,040,413 JBrowse link
G Mir409 microRNA 409 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:128,757,780...128,757,856 JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 8:109,264,555...109,264,637 JBrowse link
G Mir431 microRNA 431 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:128,544,210...128,544,323 JBrowse link
G Mir433 microRNA 433 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:128,545,119...128,545,211 JBrowse link
G Mir484 microRNA 484 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr10:887,684...887,760 JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:128,728,710...128,728,792 JBrowse link
G Mir500 microRNA 500 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr  X:15,258,778...15,258,857 JBrowse link
G Mir598 microRNA 598 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr15:37,962,692...37,962,770 JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO MGI:3619437 (PMID:21247879) RGD PMID:21247879 NCBI chr17:6,273,264...6,273,360 JBrowse link
G Mir9 microRNA 9 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 9:1,080,274...1,080,383 JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (PMID:21609717) RGD PMID:21609717 NCBI chr  X:20,981,235...20,981,342 JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 8:106,822,293...106,822,380 JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:12,943,453...12,963,966 JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IMP
ISO
IEA		 PMID:25049354
(PMID:25049354)
GO_REF:0000107		 RGD
Ensembl		 PMID:25049354 PMID:25049354 GO_REF:0000107, RGD:13792525 NCBI chr 8:4,724,009...4,733,864 JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:174,103,474...174,111,434 JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO (PMID:22832163) RGD PMID:22832163 NCBI chr17:82,157,725...82,239,411 JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:17660297) RGD PMID:17660297 NCBI chr 8:127,952,161...127,956,230 JBrowse link
G Ncl nucleolin IMP RGD PMID:21309751 RGD:9686449 NCBI chr 9:94,447,559...94,456,083 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (PMID:31786261)
GO_REF:0000107
(PMID:23776175)		 RGD
Ensembl		 PMID:23776175 PMID:31786261 PMID:16842873 GO_REF:0000107, RGD:10045666 NCBI chr 2:226,689,745...226,805,897 JBrowse link
G Nfkbib NFKB inhibitor beta involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:20060382)		 GO_Central
RGD		 PMID:20060382 GO_REF:0000033 NCBI chr 1:93,173,817...93,181,387 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO
ISS		 (PMID:20829348)
GO_REF:0000024		 RGD
UniProt		 PMID:20829348 GO_REF:0000024 NCBI chr20:3,589,974...3,608,348 JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3525252 (PMID:27129283) RGD PMID:27129283 NCBI chr11:58,251,720...58,279,767 JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:12483741), (PMID:28847925)
(PMID:28847925)		 RGD PMID:12483741 PMID:28847925 NCBI chr10:44,826,299...44,853,373 JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr19:34,555,832...34,596,281 JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in		 IEP
ISO
IEA		 (PMID:18025219), (PMID:18791161)
GO_REF:0000107		 RGD
Ensembl		 PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107, RGD:5508737 NCBI chr10:64,313,335...64,349,221 JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,494,607...70,497,261 JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18511497)		 Ensembl
RGD		 PMID:18511497 GO_REF:0000107 NCBI chr10:84,224,599...84,231,812 JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA		 (PMID:18511497)
GO_REF:0000107
(PMID:21187453)		 RGD
Ensembl		 PMID:18511497 PMID:21187453 GO_REF:0000107 NCBI chr 3:97,614,616...97,632,053 JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18972444)		 Ensembl
RGD		 PMID:18972444 GO_REF:0000107 NCBI chr 7:25,733,471...25,829,440 JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:39,821,851...39,866,122 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:19098112 RGD:9590190 NCBI chr  X:70,811,317...70,856,123 JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:9645969 RGD:9831421 NCBI chr 5:18,657,866...18,675,671 JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:18689605 RGD:2316659 NCBI chr 1:164,764,119...164,779,578 JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 involved_in ISO (PMID:22844456) RGD PMID:22844456 NCBI chr15:32,337,955...32,342,700 JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO		 GO_REF:0000024
(PMID:17911113)		 UniProt
RGD		 PMID:17911113 GO_REF:0000024 NCBI chr 1:83,683,654...83,689,233 JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:23847046 RGD:13462068 NCBI chr 5:166,636,551...166,659,825 JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:227,158,941...227,223,938 JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (PMID:19946272) RGD PMID:19946272 NCBI chr 1:252,921,342...252,944,278 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (PMID:21571906) RGD PMID:21571906 NCBI chr 1:155,823,590...155,915,434 JBrowse link
G Pde4b phosphodiesterase 4B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181444 (PMID:15585880)		 Ensembl
RGD		 PMID:15585880 GO_REF:0000107 NCBI chr 5:122,028,956...122,598,267 JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168|MGI:3525068 (PMID:15585880) RGD PMID:15585880 NCBI chr 2:41,748,337...43,262,567 JBrowse link
G Pf4 platelet factor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:17,582,477...17,583,392 JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISO
ISS		 (PMID:28007986)
GO_REF:0000024		 RGD
UniProt		 PMID:28007986 GO_REF:0000024 NCBI chr 5:109,428,600...109,460,373 JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19184369 RGD:7241806 NCBI chr15:3,505,485...3,511,987 JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,784,279...92,804,698 JBrowse link
G Plscr2 phospholipid scramblase 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:92,809,422...92,845,947 JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO (PMID:17590392) RGD PMID:17590392 NCBI chr10:54,566,556...54,573,240 JBrowse link
G Plscr4 phospholipid scramblase 4 involved_in ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,987,290...93,026,056 JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:15728586 RGD:1580656 NCBI chr20:6,300,527...6,365,707 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19853624 RGD:10059687 NCBI chr14:63,073,505...63,729,215 JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E involved_in ISO (PMID:27793001) RGD PMID:27793001 NCBI chr10:72,548,906...72,684,702 JBrowse link
G Prpf8 pre-mRNA processing factor 8 IDA RGD PMID:1345341 RGD:10045884 NCBI chr10:60,331,494...60,354,606 JBrowse link
G Ptger3 prostaglandin E receptor 3 IEP RGD PMID:14636300 RGD:10043359 NCBI chr 2:246,606,131...246,750,970 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:18769055 RGD:2300271 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:12486103) RGD PMID:12486103 NCBI chr 1:192,032,124...192,033,419 JBrowse link
G Rara retinoic acid receptor, alpha involved_in ISO (PMID:19752193) RGD PMID:19752193 NCBI chr10:83,883,490...83,928,932 JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:70,544,364...70,546,533 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEP
ISO
IBA
IDA		 (PMID:20547752)
GO_REF:0000033
(PMID:25762865)		 RGD
GO_Central		 PMID:20547752 PMID:25762865 PMID:9918814 PMID:15728586 GO_REF:0000033, RGD:2298880, RGD:1580656 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA		 (PMID:19734146)
GO_REF:0000107		 RGD
Ensembl		 PMID:19734146 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303 JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2446070|MGI:2660793 (PMID:11894097), (PMID:11894098) RGD PMID:11894097 PMID:11894098 NCBI chr 5:34,428,573...34,459,808 JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO (PMID:25903009) RGD PMID:25903009 NCBI chr 7:9,605,572...9,649,529 JBrowse link
G Selenos selenoprotein S involved_in ISO
IEA		 (PMID:18675776)
GO_REF:0000107		 RGD
Ensembl		 PMID:18675776 GO_REF:0000107 NCBI chr 1:119,659,779...119,669,546 JBrowse link
G Serpine1 serpin family E member 1 involved_in IEP
ISO
IEA		 (PMID:19916862)
GO_REF:0000107		 RGD
Ensembl		 PMID:19916862 PMID:20060032 GO_REF:0000107, RGD:13208812 NCBI chr12:25,237,977...25,248,356 JBrowse link
G Sgms1 sphingomyelin synthase 1 IEP RGD PMID:12353928 RGD:1302423 NCBI chr 1:239,409,991...239,681,195 JBrowse link
G Shpk sedoheptulokinase involved_in ISO (PMID:22682222) RGD PMID:22682222 NCBI chr10:58,316,065...58,340,489 JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (PMID:31786261) RGD PMID:31786261 NCBI chr18:51,348,282...51,416,448 JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:29687865 RGD:151357004 NCBI chr19:66,843,808...66,872,412 JBrowse link
G Smr3b submaxillary gland androgen regulated protein 3B involved_in IDA PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr14:19,783,815...19,788,557 JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEP RGD PMID:21742974 RGD:151347181 NCBI chr10:5,389,574...5,391,265 JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (PMID:14691481) RGD PMID:14691481 NCBI chr14:77,505,695...77,518,001 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20149623 RGD:2325014 NCBI chr 3:166,511,616...166,559,463 JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (PMID:19100238) RGD PMID:19100238 NCBI chr14:21,950,466...21,981,395 JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:20665543 RGD:4145535 NCBI chr16:72,969,824...72,974,447 JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO MGI:1861949 (PMID:21606371) RGD PMID:21606371 NCBI chr 9:56,911,522...56,951,926 JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:10513923 RGD:11059603 NCBI chr 7:9,034,077...9,041,489 JBrowse link
G Tfpi tissue factor pathway inhibitor IEP RGD PMID:11816723 RGD:727341 NCBI chr 3:89,939,862...89,989,253 JBrowse link
G Thpo thrombopoietin IEP RGD PMID:20236022 RGD:11073693
G Ticam1 TIR domain containing adaptor molecule 1 involved_in ISO (PMID:17658277) RGD PMID:17658277 NCBI chr 9:1,102,559...1,111,023 JBrowse link
G Ticam2 TIR domain containing adaptor molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)		 RGD PMID:19412184 PMID:22685567 NCBI chr18:39,289,902...39,311,462 JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within		 IEP
ISO		 (PMID:20051628), (PMID:21880694), (PMID:28096568)
MGI:1860755 (PMID:10880523), (PMID:14691481), (PMID:24740015)
RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456)		 RGD PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:21880694 More... RGD:7777075 NCBI chr 5:85,161,247...85,174,882 JBrowse link
G Tlr5 toll-like receptor 5 IEP RGD PMID:21308757 RGD:5129495 NCBI chr13:97,166,430...97,190,642 JBrowse link
G Tlr9 toll-like receptor 9 IEP RGD PMID:21308757 PMID:20655116 RGD:5129495, RGD:5130179 NCBI chr 8:115,743,407...115,747,523 JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEP
ISO
IMP		 (PMID:29849090)
(PMID:19047410), (PMID:20060382), (PMID:21606371)		 RGD PMID:19047410 PMID:20060382 PMID:21606371 PMID:29849090 PMID:15602748 More... RGD:1582142, RGD:14994703, RGD:14995441 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) RGD PMID:19912257 PMID:21127049 PMID:21220427 NCBI chr 1:15,528,921...15,543,993 JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr 5:157,070,642...157,104,216 JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) RGD PMID:20844189 NCBI chr13:76,256,654...76,280,133 JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:39,037,048...39,084,328 JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IBA
ISO		 GO_REF:0000033
(PMID:16633345)		 GO_Central
RGD		 PMID:16633345 GO_REF:0000033 NCBI chr14:80,452,936...80,470,141 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO
IBA		 (PMID:17088249)
GO_REF:0000033		 RGD
GO_Central		 PMID:17088249 GO_REF:0000033 NCBI chr 4:94,867,258...94,908,780 JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 3:87,963,517...87,988,316 JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IEP RGD PMID:26383906 RGD:127284850 NCBI chr 9:20,259,227...20,276,879 JBrowse link
G Trim41 tripartite motif-containing 41 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr10:33,175,213...33,186,472 JBrowse link
G Tspo translocator protein IEP RGD PMID:14678758 RGD:2317158 NCBI chr 7:116,600,214...116,610,461 JBrowse link
G Vim vimentin involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:27812135)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:27812135 GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,577,261...81,585,746 JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:16376325 RGD:1625574 NCBI chr 1:234,239,769...234,272,150 JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:17708840 RGD:11079229 NCBI chr 4:160,042,900...160,177,757 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (PMID:18174455)
GO_REF:0000107		 RGD
Ensembl		 PMID:18174455 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860 JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12612580)
GO_REF:0000107
(PMID:11460154)		 UniProt
RGD
Ensembl		 PMID:11460154 PMID:12612580 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707 JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
ISS		 (PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989)
(PMID:19322177), (PMID:21616078), (PMID:26000482)
GO_REF:0000024		 RGD
UniProt		 PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 More... GO_REF:0000024 NCBI chr 5:142,661,193...142,670,051 JBrowse link
G Zfp36 zinc finger protein 36 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:10330172), (PMID:11533235), (PMID:22844456), (PMID:9703499)
GO_REF:0000024
(PMID:14679154), (PMID:14766228), (PMID:15187101)		 Ensembl
RGD
UniProt		 PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 1:92,796,628...92,799,108 JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:91,837,139...91,839,736 JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within ISO (PMID:12594207) RGD PMID:12594207 NCBI chr18:28,609,558...28,611,409 JBrowse link
G Cd36 CD36 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1931790|MGI:2447190|MGI:3573941 (PMID:15690042), (PMID:16061696)		 Ensembl
RGD		 PMID:15690042 PMID:16061696 GO_REF:0000107 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:37,271,888...37,276,782 JBrowse link
G Lbp lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12594207)
GO_REF:0000107		 RGD
Ensembl		 PMID:12594207 GO_REF:0000107 NCBI chr 3:146,953,889...146,981,032 JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO
IEA		 (PMID:26649771)
GO_REF:0000107		 RGD
Ensembl		 PMID:26649771 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (PMID:11894098) RGD PMID:11894098 NCBI chr 5:34,428,573...34,459,808 JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (PMID:15690042) RGD PMID:15690042 NCBI chr 8:41,789,557...41,805,903 JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:26649771)
MGI:2674036 (PMID:15690042)
(PMID:12594207)		 RGD PMID:12594207 PMID:15690042 PMID:26649771 NCBI chr 2:171,499,189...171,504,831 JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1860885 (PMID:10549626)		 Ensembl
RGD		 PMID:10549626 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:12,647,605...12,654,190 JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:19014335) RGD PMID:19014335 NCBI chr15:79,871,819...79,881,101 JBrowse link
G Ahr aryl hydrocarbon receptor involved_in IEA
ISO		 GO_REF:0000107
(PMID:29454749)		 Ensembl
RGD		 PMID:29454749 GO_REF:0000107 NCBI chr 6:57,961,423...57,998,901 JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (PMID:31285585) RGD PMID:31285585 NCBI chr 7:97,524,941...97,649,846 JBrowse link
G Fcgr2b Fc gamma receptor 2B acts_upstream_of_or_within ISO MGI:1857166 (PMID:12385742) RGD PMID:12385742 NCBI chr13:85,725,897...85,740,517 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA		 (PMID:16601243)
GO_REF:0000107		 RGD
Ensembl		 PMID:16601243 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276 JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:19853610 RGD:2325979 NCBI chr 8:58,762,088...59,062,131 JBrowse link
G Tnf tumor necrosis factor IEP streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chr20:3,626,685...3,629,303 JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:16601243) RGD PMID:16601243 NCBI chr16:3,702,300...3,724,860 JBrowse link
cellular response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase IDA RGD PMID:10744701 RGD:1600536 NCBI chr  X:102,016,070...102,055,448 JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (PMID:15845454), (PMID:17159984), (PMID:27288407) RGD PMID:15845454 PMID:17159984 PMID:27288407 NCBI chr 4:162,902,731...162,913,931 JBrowse link
G Klrh1 killer cell lectin-like receptor subfamily H, member 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:163,288,228...163,301,977 JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (PMID:27288407) RGD PMID:27288407 NCBI chr10:55,507,646...55,527,764 JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:15845454)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:15845454 GO_REF:0000024 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927 JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Defb25 defensin beta 25 involved_in ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 3:141,098,813...141,099,752 JBrowse link
G Irf5 interferon regulatory factor 5 involved_in ISO (PMID:22412986) RGD PMID:22412986 NCBI chr 4:59,092,914...59,104,596 JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:27374331) RGD PMID:27374331 NCBI chr10:44,826,299...44,853,373 JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IEP
ISO		 MGI:2680581 (PMID:16949315) RGD PMID:16949315 PMID:24169446 RGD:13204728 NCBI chr19:34,555,832...34,596,281 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 1:212,354,336...212,364,815 JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (PMID:11894098) RGD PMID:11894098 NCBI chr 5:34,428,573...34,459,808 JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:16949315) RGD PMID:16949315 NCBI chr 2:171,499,189...171,504,831 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:12,647,605...12,654,190 JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO
ISS		 (PMID:16880211)
GO_REF:0000024		 RGD
UniProt		 PMID:16880211 GO_REF:0000024 NCBI chr18:28,609,558...28,611,409 JBrowse link
G Tlr1 toll-like receptor 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16880211)
GO_REF:0000033
(PMID:19931471)		 RGD
GO_Central		 PMID:16880211 PMID:19931471 GO_REF:0000033 NCBI chr14:43,737,761...43,750,389 JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:16880211)
(PMID:19931471)		 RGD PMID:16880211 PMID:19931471 NCBI chr 2:171,499,189...171,504,831 JBrowse link
cellular response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:24500530) RGD PMID:24500530 NCBI chr11:50,375,101...50,399,373 JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 involved_in ISO (PMID:24525126) RGD PMID:24525126 NCBI chr11:75,965,717...76,006,733 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:28835460) RGD PMID:28835460 NCBI chr 8:118,585,082...118,586,382 JBrowse link
cellular response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:19014335) RGD PMID:19014335 NCBI chr15:79,871,819...79,881,101 JBrowse link
G Actg1 actin, gamma 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 NCBI chr10:106,118,106...106,120,951 JBrowse link
G Actg1l1 actin, gamma 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:72,977,767...72,979,691 JBrowse link
G Actr2 actin related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1921367 (PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 NCBI chr14:98,500,119...98,535,092 JBrowse link
G Actr3 actin related protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1913963 (PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 NCBI chr13:39,353,413...39,396,509 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:10,299,264...10,338,464 JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISO
IEP		 (PMID:9614071)
PMID:7769138		 RGD PMID:9614071 PMID:7769138 RGD:61535 NCBI chr20:3,651,435...3,657,341 JBrowse link
G Aqp4 aquaporin 4 involved_in ISO
IEA		 (PMID:17645239)
GO_REF:0000107		 RGD
Ensembl		 PMID:17645239 GO_REF:0000107 NCBI chr18:6,782,389...6,799,034 JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:103,669,001...103,694,375 JBrowse link
G Asl argininosuccinate lyase IEP with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr12:26,659,664...26,677,136 JBrowse link
G Ass1 argininosuccinate synthase 1 IEP with TNFalpha RGD PMID:12589771 PMID:11072090 RGD:1599307, RGD:4139899 NCBI chr 3:14,747,355...14,796,909 JBrowse link
G Atl3 atlastin GTPase 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:204,680,958...204,727,360 JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:11972023) RGD PMID:11972023 NCBI chr 6:125,217,191...125,227,855 JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:11972023) RGD PMID:11972023 NCBI chr 6:12,845,170...12,857,830 JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:11972023) RGD PMID:11972023 NCBI chr 1:86,718,761...86,725,869 JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:11972023)		 Ensembl
RGD		 PMID:11972023 GO_REF:0000107 NCBI chr18:56,648,779...56,711,505 JBrowse link
G Capg capping actin protein, gelsolin like acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 4:106,152,912...106,170,010 JBrowse link
G Casp1 caspase 1 involved_in ISO (PMID:11536016) RGD PMID:11536016 NCBI chr 8:10,746,338...10,882,295 JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO		 (PMID:14662900)
(PMID:9407497)		 RGD PMID:9407497 PMID:14662900 PMID:14512159 RGD:8548859 NCBI chr10:67,503,077...67,504,875 JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISO (PMID:9407497) RGD PMID:9407497 NCBI chr10:68,948,889...68,950,439 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) RGD PMID:9407497 NCBI chr10:68,820,330...68,824,906 JBrowse link
G Cd47 Cd47 molecule involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:64,374,816...64,438,763 JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 5:154,838,478...154,876,629 JBrowse link
G Cdc42ep2 CDC42 effector protein 2 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 1:203,202,000...203,210,891 JBrowse link
G Cdc42ep4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr10:99,271,750...99,298,551 JBrowse link
G Cfh complement factor H IEP RGD PMID:12121434 RGD:632369 NCBI chr13:51,512,376...51,613,829 JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:11071855 RGD:632488 NCBI chr10:5,139,947...5,187,493 JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:18768927 RGD:11344890 NCBI chr11:87,926,376...87,941,533 JBrowse link
G Cripto cripto, EGF-CFC family member involved_in ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:110,924,774...110,938,545 JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 IEP RGD PMID:12121434 RGD:632369 NCBI chr 7:106,772,597...106,780,536 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835)
(PMID:23071094)		 RGD PMID:18995835 PMID:23071094 NCBI chr17:3,935,826...4,096,858 JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO
IEA		 (PMID:18995835)
(PMID:23071094)
GO_REF:0000107		 RGD
Ensembl		 PMID:18995835 PMID:23071094 GO_REF:0000107 NCBI chr 7:9,174,903...9,183,272 JBrowse link
G Daxx death-domain associated protein IMP RGD PMID:21572393 RGD:9587767 NCBI chr20:4,971,973...4,978,062 JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:22301113 RGD:8662301 NCBI chr17:22,660,799...22,666,687 JBrowse link
G ENSRNOG00000065742 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000066766 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO (PMID:15479637)
(PMID:23071094)		 RGD PMID:15479637 PMID:23071094 NCBI chr13:99,431,955...99,503,510 JBrowse link
G Epsti1 epithelial stromal interaction 1 acts_upstream_of_or_within ISO (PMID:29217193) RGD PMID:29217193 NCBI chr15:59,692,712...59,791,376 JBrowse link
G Evl Enah/Vasp-like acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 6:127,473,119...127,594,342 JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10029626 RGD:14700709 NCBI chr 1:241,212,155...241,245,774 JBrowse link
G Faslg Fas ligand IEP RGD PMID:10029626 RGD:14700709 NCBI chr13:76,680,885...76,706,042 JBrowse link
G Fcar Fc alpha receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:69,626,458...69,660,558 JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr15:16,961,999...17,095,059 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:15479637) RGD PMID:15479637 NCBI chr 4:157,962,312...157,967,158 JBrowse link
G Gbp1 guanylate binding protein 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17266443), (PMID:21151871)
(PMID:18025219)
GO_REF:0000033		 RGD
GO_Central		 PMID:17266443 PMID:18025219 PMID:21151871 GO_REF:0000033 NCBI chr 2:234,071,366...234,106,012 JBrowse link
G Gbp1-ps1 guanylate binding protein 1, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:231,517,485...231,525,865 JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:17266443)
(PMID:18025219)
GO_REF:0000033
GO_REF:0000117		 RGD
GO_Central
UniProt		 PMID:17266443 PMID:18025219 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:234,005,727...234,021,812 JBrowse link
G Gbp3 guanylate binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:231,460,032...231,500,266 JBrowse link
G Gbp4 guanylate binding protein 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17266443)
(PMID:18025219)
GO_REF:0000033		 RGD
GO_Central		 PMID:17266443 PMID:18025219 GO_REF:0000033 NCBI chr 2:231,304,910...231,318,883 JBrowse link
G Gbp5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:17266443)
(PMID:18025219)
GO_REF:0000033		 RGD
GO_Central		 PMID:17266443 PMID:18025219 GO_REF:0000033 NCBI chr 2:231,237,748...231,257,071 JBrowse link
G Gbp6 guanylate binding protein family member 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18025219)		 GO_Central
RGD		 PMID:18025219 GO_REF:0000033 NCBI chr14:5,034,999...5,062,023 JBrowse link
G Gbp6-ps1 guanylate binding protein 6, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:4,661,784...4,678,989 JBrowse link
G Gbp6-ps2 guanylate binding protein 6, pseudogene 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:231,643,579...231,672,818 JBrowse link
G Gbp7 guanylate binding protein 7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18025219)		 GO_Central
RGD		 PMID:18025219 GO_REF:0000033 NCBI chr 2:231,275,521...231,297,289 JBrowse link
G Gsn gelsolin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 NCBI chr 3:38,982,605...39,035,849 JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:7865494 RGD:11520781 NCBI chr 8:27,829,688...27,841,618 JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219) RGD PMID:18025219 NCBI chr10:29,390,300...29,405,194 JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) RGD PMID:12023369 NCBI chr16:18,620,228...18,633,207 JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18547159 RGD:4889457 NCBI chr 8:59,802,072...59,829,275 JBrowse link
G Irf1 interferon regulatory factor 1 IEP RGD PMID:21261980 RGD:5128727 NCBI chr10:38,417,935...38,424,946 JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO
IEP		 (PMID:25122610) RGD PMID:25122610 PMID:21261980 RGD:5128727 NCBI chr19:48,790,581...48,812,363 JBrowse link
G Irgm immunity-related GTPase M acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr10:33,233,513...33,241,594 JBrowse link
G Kif16b kinesin family member 16B acts_upstream_of_or_within ISO (PMID:19144319) RGD PMID:19144319 NCBI chr 3:129,974,692...130,254,194 JBrowse link
G Kif5b kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 NCBI chr17:56,185,386...56,222,990 JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) RGD PMID:23817958 NCBI chr10:64,405,044...64,428,249