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ONTOLOGY REPORT - ANNOTATIONS

Term:small molecule biosynthetic process
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Accession:GO:0044283 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule biosynthesis


show annotations for term's descendants           Sort by:
small molecule biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp51 cytochrome P450, family 51 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:30,036,956...30,055,410 JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA		 (PMID:1881876)
(PMID:23704330)
GO_REF:0000107		 RGD
Ensembl		 PMID:1881876 PMID:23704330 GO_REF:0000107 NCBI chr 6:94,977,862...95,045,375 JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO
IBA		 (PMID:12937168)
GO_REF:0000033		 RGD
GO_Central		 PMID:12937168 GO_REF:0000033 NCBI chr 1:40,443,926...40,632,911 JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IEA
ISO
IBA		 GO_REF:0000107
(PMID:17034760)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:17034760 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:103,112,974...103,132,122 JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11876656)		 Ensembl
RGD		 PMID:11876656 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 8:71,877,850...71,957,107 JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 1:16,183,940...16,203,385 JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:66,991,940...66,998,014 JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO
ISS		 (PMID:11304534)
GO_REF:0000024		 RGD
UniProt		 PMID:11304534 GO_REF:0000024 NCBI chr 3:54,147,834...54,170,052 JBrowse link
G Rdh9 retinol dehydrogenase 9 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 7:63,642,305...63,645,149 JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:139,450,383...139,500,325 JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:144,003,808...144,047,452 JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5' nucleotidase, ecto involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 GO_REF:0000107
MGI:3522017 (PMID:16547283)		 Ensembl
RGD		 PMID:16547283 PMID:30269308 GO_REF:0000107, RGD:152995394 NCBI chr 8:98,150,925...98,195,646 JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO		 PMID:19342457
GO_REF:0000107
(PMID:19342457)		 Ensembl
RGD		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,894,630...14,952,317 JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP
IBA		 PMID:19342457
GO_REF:0000033		 GO_Central PMID:19342457 GO_REF:0000033, RGD:4891166 NCBI chr 7:106,772,597...106,780,536 JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:19342457), (PMID:2256920)		 Ensembl
GO_Central
RGD		 PMID:2256920 PMID:19342457 PMID:11832364 GO_REF:0000033 GO_REF:0000107, RGD:727991 NCBI chr 7:108,719,349...108,726,024 JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:1741400), (PMID:19342457), (PMID:2256920), (PMID:23322723)
(PMID:1686470), (PMID:8645611)		 RGD PMID:1686470 PMID:1741400 PMID:2256920 PMID:8645611 PMID:19342457 More... NCBI chr 7:106,808,559...106,814,048 JBrowse link
androst-4-ene-3,17-dione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (PMID:32954300) RGD PMID:32954300 NCBI chr17:53,787,159...53,810,942 JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr12:26,659,664...26,677,136 JBrowse link
G Otc ornithine transcarbamylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:15,126,358...15,202,473 JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:2573597)		 GO_Central
RGD		 PMID:2573597 PMID:2887559 GO_REF:0000033, RGD:2316002 NCBI chr 4:36,752,061...36,769,970 JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:48,126,808...48,139,073 JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:4193185)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:4193185 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:252,306,541...252,337,622 JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:64,860,308...64,873,656 JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,180,428...9,206,113 JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:209,293,902...210,159,777 JBrowse link
G Upb1 beta-ureidopropionase 1 TAS RGD PMID:8449931 RGD:634224 NCBI chr20:13,216,693...13,243,016 JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in ISO
IBA
ISS		 (PMID:22525402), (PMID:29976570)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:22525402 PMID:29976570 GO_REF:0000024 GO_REF:0000033 NCBI chr20:13,216,693...13,243,016 JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25168382)		 UniProt
RGD		 PMID:25168382 GO_REF:0000024 NCBI chr 2:212,536,791...212,590,379 JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO
IEA
ISS		 (PMID:27884763)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27884763 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,090,820...19,122,392 JBrowse link
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:7508385)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:7508385 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:67,121,288...67,154,543 JBrowse link
G Amacr alpha-methylacyl-CoA racemase involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11964182 GO_REF:0000041, RGD:704372 NCBI chr 2:61,673,291...61,685,381 JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727), (PMID:8034703) RGD PMID:8034703 PMID:12810727 NCBI chr 5:68,647,166...68,656,137 JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in IEA
ISS
ISO		 GO_REF:0000041
GO_REF:0000024
(PMID:11412116), (PMID:9660774)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:9660774 PMID:11412116 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:83,712,402...83,743,222 JBrowse link
G Cyp39a1 cytochrome P450, family 39, subfamily a, polypeptide 1 involved_in ISO
IBA		 (PMID:10748047)
GO_REF:0000033		 RGD
GO_Central		 PMID:10748047 GO_REF:0000033 NCBI chr 9:24,727,817...24,804,060 JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in TAS
IBA
IEA
IDA
ISO		 GO_REF:0000033
GO_REF:0000041
PMID:1694852
(PMID:19965590)		 GO_Central
UniProt
RGD		 PMID:19965590 PMID:2335522 PMID:1694852 GO_REF:0000033 GO_REF:0000041, RGD:70535, RGD:70534 NCBI chr 5:24,174,505...24,184,202 JBrowse link
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 involved_in TAS
ISO
IBA
IEA		 (PMID:10748047)
GO_REF:0000033
GO_REF:0000041
GO_REF:0000107		 RGD
GO_Central
UniProt
Ensembl		 PMID:10748047 PMID:12029625 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1298868 NCBI chr 2:102,419,011...102,586,047 JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:14643796)
(PMID:12393855)		 RGD PMID:12393855 PMID:14643796 NCBI chr 8:130,455,622...130,457,592 JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3769404 (PMID:22912762)		 Ensembl
RGD		 PMID:22912762 GO_REF:0000107 NCBI chr 5:166,606,841...166,620,124 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (PMID:11279518) RGD PMID:11279518 NCBI chr12:47,299,171...47,333,457 JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
IEA
ISS		 (PMID:12917011)
GO_REF:0000107
GO_REF:0000024
GO_REF:0000041		 RGD
Ensembl
UniProt		 PMID:12917011 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:21,089,142...21,091,603 JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO MGI:2180128 (PMID:14673138) RGD PMID:14673138 NCBI chr 2:96,050,380...96,072,928 JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO
IEA		 (PMID:11980911)
GO_REF:0000107		 RGD
Ensembl		 PMID:11980911 GO_REF:0000107 NCBI chr 3:113,804,728...113,842,208 JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO (PMID:11980911) RGD PMID:11980911 NCBI chr 1:82,688,742...82,699,335 JBrowse link
G Star steroidogenic acute regulatory protein IDA RGD PMID:15382124 RGD:1600081 NCBI chr16:72,969,824...72,974,447 JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:179,695,662...179,777,973 JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:96,040,407...96,060,008 JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:179,694,647...179,709,083 JBrowse link
G Cyp27a1 cytochrome P450, family 27, subfamily a, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:15465040)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:15465040 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:83,712,402...83,743,222 JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA
IBA		 (PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
GO_REF:0000107
(PMID:15972816)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 7:64,756,626...64,761,570 JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 involved_in ISO (PMID:15465040), (PMID:18511070) RGD PMID:15465040 PMID:18511070 NCBI chr 1:168,749,302...168,798,079 JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:14,321,771...14,343,886 JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:20097752)
(PMID:20097752), (PMID:24891507)
GO_REF:0000033		 RGD
GO_Central		 PMID:20097752 PMID:24891507 GO_REF:0000033 NCBI chr 1:201,459,061...201,470,019 JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07021955.1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:50,100,840...50,118,886 JBrowse link
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within ISO MGI:2180783 (PMID:8647961) RGD PMID:8647961 NCBI chr 8:55,423,945...55,425,729 JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:11015575) RGD PMID:11015575 NCBI chr19:30,046,494...30,085,039 JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856709 (PMID:17085523)		 Ensembl
RGD		 PMID:17085523 GO_REF:0000107 NCBI chr 4:47,422,084...47,694,646 JBrowse link
G Cyb5r3 cytochrome b5 reductase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:116,186,729...116,204,290 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:14684813)
MGI:3027024 (PMID:14684813), (PMID:16321981), (PMID:16513830)
(PMID:11519011)		 UniProt
RGD		 PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 GO_REF:0000024 NCBI chr 5:121,344,552...121,371,124 JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in TAS
IBA
ISO
IMP
IC
IDA		 GO_REF:0000033
(PMID:9465114)		 GO_Central
RGD		 PMID:9465114 PMID:12031495 PMID:9831636 PMID:10666310 PMID:10329655 GO_REF:0000033, RGD:625561, RGD:2316918, RGD:2316916, RGD:632010 NCBI chr 1:199,015,081...199,031,055 JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in IDA
IBA
ISO
IEA
TAS		 GO_REF:0000033
(PMID:9894009)
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:9894009 PMID:11171067 PMID:11171067 GO_REF:0000033 GO_REF:0000041, RGD:628445, RGD:628445 NCBI chr  X:14,299,427...14,305,826 JBrowse link
G ENSRNOG00000062441 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Fdft1 farnesyl diphosphate farnesyl transferase 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16440058 GO_REF:0000033, RGD:1626611 NCBI chr15:41,588,114...41,616,168 JBrowse link
G Fdps farnesyl diphosphate synthase TAS RGD PMID:1321149 RGD:728501 NCBI chr 2:176,795,192...176,804,816 JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) RGD PMID:12027950 NCBI chr  X:157,352,364...157,372,144 JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:23063590)
(PMID:15845870), (PMID:7798939), (PMID:8647961)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:7798939 PMID:8647961 PMID:15845870 PMID:23063590 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:29,732,163...29,754,276 JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:53,379,457...53,399,807 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,875,609...185,903,505 JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in
acts_upstream_of_or_within		 ISO
IBA
ISS
IEA		 (PMID:12829805)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107		 RGD
GO_Central
UniProt
Ensembl		 PMID:12829805 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:82,170,079...82,190,018 JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in TAS
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:9228075 GO_REF:0000043, RGD:729078 NCBI chr17:61,629,592...61,637,357 JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,331,385...61,334,987 JBrowse link
G Idi2-ps1 isopentenyl-diphosphate delta isomerase 2, pseudogene 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,420,357...61,423,924 JBrowse link
G Idi2l2 isopentenyl-diphosphate delta isomerase 2 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,372,853...61,386,459 JBrowse link
G Idi2l3 isopentenyl-diphosphate delta isomerase 2 like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,518,138...61,535,484 JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:32322062)
MGI:1920249 (PMID:16955138)
GO_REF:0000033		 RGD
GO_Central		 PMID:16955138 PMID:32322062 GO_REF:0000033 NCBI chr 4:8,049,339...8,057,812 JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
MGI:1916289 (PMID:16955138)
GO_REF:0000033
GO_REF:0000107
(PMID:32322062)		 UniProt
RGD
GO_Central
Ensembl		 PMID:16955138 PMID:32322062 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139 JBrowse link
G Lbr lamin B receptor involved_in ISO
IBA
IEA
ISS		 (PMID:16784888), (PMID:27336722)
(PMID:18785926), (PMID:22140257)
GO_REF:0000033
GO_REF:0000041
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:16784888 PMID:18785926 PMID:22140257 PMID:27336722 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr13:93,539,386...93,564,026 JBrowse link
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2451080 (PMID:25147230), (PMID:29599133)		 Ensembl
RGD		 PMID:25147230 PMID:29599133 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936 JBrowse link
G LOC102550988 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,451,920...61,457,799 JBrowse link
G LOC102551575 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,504,294...61,507,015 JBrowse link
G LOC120097764 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:61,338,622...61,349,795 JBrowse link
G LOC120102490 insulin-induced gene 1 protein-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:67,330,399...67,331,371 JBrowse link
G LOC134482631 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC134482634 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC134482635 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC134482779 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC134482866 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G LOC134484812 isopentenyl-diphosphate delta-isomerase 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Lss lanosterol synthase involved_in IMP
IBA
IEA
IDA
ISO		 GO_REF:0000033
GO_REF:0000107
PMID:7568116
(PMID:17186944)		 GO_Central
Ensembl
RGD		 PMID:17186944 PMID:16440058 PMID:7568116 PMID:1429550 GO_REF:0000033 GO_REF:0000107, RGD:1626611, RGD:728996, RGD:2316919 NCBI chr20:12,090,641...12,118,230 JBrowse link
G Msmo1 methylsterol monooxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:24,980,680...24,997,927 JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in NAS
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11767099 GO_REF:0000041, RGD:729305 NCBI chr19:50,496,366...50,506,429 JBrowse link
G Mvk mevalonate kinase involved_in TAS
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000043
(PMID:1377680)		 GO_Central
Ensembl
UniProt
RGD		 PMID:1377680 PMID:2158094 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:728935 NCBI chr12:47,802,002...47,819,503 JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:81,071,448...81,091,113 JBrowse link
G Nsdhl NAD(P) dependent 3-beta-hydroxysteroid dehydrogenase NSDHL involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:155,817,301...155,848,224 JBrowse link
G Pmvk phosphomevalonate kinase involved_in ISO
IBA
NAS		 (PMID:8663599)
GO_REF:0000033
PMID:10191291		 RGD
GO_Central		 PMID:8663599 PMID:10191291 GO_REF:0000033, RGD:8553625 NCBI chr 2:177,174,344...177,184,076 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:55,967,766...56,003,450 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:125,036,945...125,109,010 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of ISO MGI:2177958 (PMID:9329978) RGD PMID:9329978 NCBI chr10:45,507,152...45,529,164 JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA
ISO		 GO_REF:0000041
(PMID:18785926)
(PMID:16784888)		 UniProt
RGD		 PMID:16784888 PMID:18785926 GO_REF:0000041 NCBI chr 1:203,355,930...203,360,287 JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp51 cytochrome P450, family 51 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7581240 GO_REF:0000033, RGD:2316902 NCBI chr 4:30,036,956...30,055,410 JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) RGD PMID:11519011 NCBI chr 5:121,344,552...121,371,124 JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr7 7-dehydrocholesterol reductase involved_in ISO
IEA		 (PMID:38297129), (PMID:38297130)
GO_REF:0000107		 RGD
Ensembl		 PMID:38297129 PMID:38297130 GO_REF:0000107 NCBI chr 1:199,015,081...199,031,055 JBrowse link
G Sc5d sterol-C5-desaturase involved_in IDA
IBA
ISO		 GO_REF:0000033
PMID:4019441
(PMID:10786622)		 GO_Central
RGD		 PMID:10786622 PMID:7961720 PMID:4019441 GO_REF:0000033, RGD:2316911, RGD:405866208 NCBI chr 8:42,629,649...42,641,257 JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761 PMID:26297558 NCBI chr 1:249,325,082...249,357,383 JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IDA RGD PMID:7053379 RGD:10755426 NCBI chr 6:25,292,133...25,315,078 JBrowse link
G Otc ornithine transcarbamylase involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:2556444), (PMID:8112735)		 GO_Central
RGD		 PMID:2556444 PMID:8112735 PMID:9472964 GO_REF:0000033, RGD:4144071 NCBI chr  X:15,126,358...15,202,473 JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in IMP
IEA
ISO		 PMID:19342457
GO_REF:0000107
(PMID:19342457)		 Ensembl
RGD		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr10:14,894,630...14,952,317 JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 involved_in IMP PMID:19342457 UniProt PMID:19342457 RGD:4891166 NCBI chr 7:106,772,597...106,780,536 JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 involved_in ISO (PMID:19342457), (PMID:2022736), (PMID:8506298) RGD PMID:2022736 PMID:8506298 PMID:19342457 NCBI chr 7:108,719,349...108,726,024 JBrowse link
G Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 NOT|involved_in ISO (PMID:9703385)
(PMID:19342457)		 RGD PMID:9703385 PMID:19342457 NCBI chr 7:106,808,559...106,814,048 JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA
TAS		 MGI:3044282 (PMID:15028668)
GO_REF:0000033
(PMID:8651275)
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:8651275 PMID:15028668 PMID:15533043 PMID:12079381 GO_REF:0000033 GO_REF:0000041, RGD:1359081, RGD:632754 NCBI chr 7:10,099,267...10,102,083 JBrowse link
G Gatm glycine amidinotransferase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:9218780)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:9218780 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:109,658,919...109,675,508 JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:130,275,631...130,284,968 JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:70,122,474...70,132,756 JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:1380156)		 Ensembl
GO_Central
RGD		 PMID:1380156 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:39,981,419...40,002,993 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
(PMID:12925531)
(PMID:1419907)
GO_REF:0000033
(PMID:1380156), (PMID:7592599), (PMID:7947975)		 UniProt
RGD
GO_Central		 PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 GO_REF:0000024 GO_REF:0000033 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2182095|MGI:5758867 (PMID:28973536) RGD PMID:28973536 NCBI chr10:52,243,664...52,256,250 JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:18723875 RGD:2311353 NCBI chr10:102,257,413...102,263,086 JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in
acts_upstream_of_or_within		 ISO (PMID:24416422)
MGI:1857139 (PMID:15030387)		 RGD PMID:15030387 PMID:24416422 NCBI chr20:9,708,089...9,732,623 JBrowse link
G Cth cystathionine gamma-lyase involved_in IEA
ISS
ISO		 GO_REF:0000041
GO_REF:0000024
(PMID:10212249)		 UniProt
RGD		 PMID:10212249 GO_REF:0000024 GO_REF:0000041 NCBI chr 2:249,634,731...249,661,066 JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12468440)		 Ensembl
RGD		 PMID:12468440 GO_REF:0000107 NCBI chr20:13,074,695...13,104,095 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623 JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623 JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO
IBA
IEA		 (PMID:19428278)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:19428278 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:249,634,731...249,661,066 JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:11054547), (PMID:15193426)
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237)
GO_REF:0000033		 RGD
GO_Central		 PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 GO_REF:0000033 NCBI chr10:59,769,563...59,786,688 JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099 JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:126,370,348...126,372,405 JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:26,118,194...26,196,889 JBrowse link
G Ust uronyl-2-sulfotransferase involved_in ISO (PMID:10187838) RGD PMID:10187838 NCBI chr 1:4,487,316...4,782,579 JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 IDA RGD PMID:2507189 RGD:11252156 NCBI chr13:95,246,079...95,275,852 JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in TAS PMID:10806397 UniProt PMID:10806397 RGD:2326086 NCBI chr 1:50,100,840...50,118,886 JBrowse link
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) RGD PMID:28842490 NCBI chr 5:146,198,359...146,224,479 JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO (PMID:38821050) RGD PMID:38821050 NCBI chr12:16,299,768...16,304,553 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:25066056)
GO_REF:0000033		 RGD
GO_Central		 PMID:25066056 GO_REF:0000033 NCBI chr20:31,811,817...31,838,562 JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO
IBA
ISS
IEA		 (PMID:38821050)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000107		 RGD
GO_Central
UniProt
Ensembl		 PMID:38821050 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:32,046,408...32,060,796 JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
ISS		 (PMID:25168382)
GO_REF:0000024		 RGD
UniProt		 PMID:25168382 GO_REF:0000024 NCBI chr 2:212,536,791...212,590,379 JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in IDA
ISO
IBA
IEA		 (PMID:20952656)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000043		 RGD
GO_Central
Ensembl
UniProt		 PMID:20952656 PMID:11735100 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:2317316 NCBI chr10:69,511,627...69,773,888 JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17210641)		 GO_Central
RGD		 PMID:17210641 GO_REF:0000033 NCBI chr12:48,026,394...48,138,214 JBrowse link
G Acly ATP citrate lyase involved_in IDA
IBA
ISO
IEA		 GO_REF:0000033
(PMID:10653665), (PMID:19286649)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:10653665 PMID:19286649 PMID:11735100 GO_REF:0000033 GO_REF:0000107, RGD:2317316 NCBI chr10:85,412,045...85,464,253 JBrowse link
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO
IBA		 (PMID:21846720)
GO_REF:0000033		 RGD
GO_Central		 PMID:21846720 GO_REF:0000033 NCBI chr19:50,835,116...50,875,557 JBrowse link
G Acsl3 acyl-CoA synthetase long-chain family member 3 IDA RGD PMID:8663269 RGD:70280 NCBI chr 9:80,115,164...80,164,636 JBrowse link
G Acsm1 acyl-CoA synthetase medium-chain family member 1 acts_upstream_of_or_within ISO (PMID:11470804) RGD PMID:11470804 NCBI chr 1:173,985,715...174,020,565 JBrowse link
G Acsm2 acyl-CoA synthetase medium-chain family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:173,916,368...173,955,116 JBrowse link
G Acsm3 acyl-CoA synthetase medium-chain family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:11470804)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:11470804 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,133,260...174,159,966 JBrowse link
G Acsm4 acyl-CoA synthetase medium-chain family member 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:174,053,931...174,078,345 JBrowse link
G Acsm5 acyl-CoA synthetase medium-chain family member 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:173,870,873...173,896,838 JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,917,693...86,978,012 JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
GO_REF:0000041
UniProtKB:Q92506 (PMID:25203508)		 UniProt
GO_Central
Ensembl
RGD		 PMID:25203508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 NCBI chr16:28,629,928...28,684,230 JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:96,478,645...96,485,302 JBrowse link
G Degs1l2 delta(4)-desaturase, sphingolipid 1 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:92,831,549...92,839,257 JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:23,544,598...23,584,855 JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:78,790,846...78,857,307 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:220,738,095...220,845,528 JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:39,789,229...39,858,579 JBrowse link
G ENSRNOG00000070521 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Fa2h fatty acid 2-hydroxylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:39,312,904...39,364,153 JBrowse link
G Fads6 fatty acid desaturase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:100,522,981...100,538,181 JBrowse link
G Fasn fatty acid synthase acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA		 (PMID:22331133)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:22331133 PMID:15715522 GO_REF:0000033 GO_REF:0000041, RGD:2317317 NCBI chr10:106,570,415...106,588,581 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384429 (PMID:10852923) RGD PMID:10852923 NCBI chr12:47,299,171...47,333,457 JBrowse link
G Hsd17b8 hydroxysteroid (17-beta) dehydrogenase 8 involved_in ISO
IBA
IEA
ISS		 UniProtKB:Q8N4T8 (PMID:25203508)
GO_REF:0000033
GO_REF:0000043
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024		 RGD
GO_Central
UniProt
Ensembl		 PMID:25203508 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr20:4,826,725...4,828,742 JBrowse link
G Lipc lipase C, hepatic type involved_in ISO
IBA
IEA		 (PMID:182536)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:182536 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:71,509,633...71,635,663 JBrowse link
G Lipg lipase G, endothelial type involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:68,514,923...68,536,105 JBrowse link
G Lpl lipoprotein lipase involved_in ISO
IBA
IEA		 (PMID:182536)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:182536 GO_REF:0000033 GO_REF:0000107 NCBI chr16:25,596,205...25,621,928 JBrowse link
G Mcat malonyl-CoA-acyl carrier protein transacylase involved_in ISO
IBA
IEA		 (PMID:12882974)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:12882974 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:114,693,612...114,705,677 JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:149,313,765...149,339,964 JBrowse link
G Mgll monoglyceride lipase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:122,749,436...122,851,440 JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IMP
IBA
ISO		 PMID:15105298
GO_REF:0000033
(PMID:15003260)		 GO_Central
RGD		 PMID:15003260 PMID:15105298 GO_REF:0000033, RGD:1600796 NCBI chr19:64,356,582...64,372,447 JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:176,644,696...176,658,131 JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:9,210,443...9,215,852 JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in IEA GO_REF:0000041
GO_REF:0000043		 UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 9:73,897,877...73,926,511 JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO
IEA
IDA		 (PMID:1918029)
GO_REF:0000107		 RGD
Ensembl		 PMID:1918029 PMID:1918029 GO_REF:0000107, RGD:8553780 NCBI chr12:46,802,932...46,814,511 JBrowse link
G Pnlip pancreatic lipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:257,774,012...257,811,656 JBrowse link
G Pnliprp1 pancreatic lipase-related protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:257,867,885...257,883,514 JBrowse link
G Pnliprp2 pancreatic lipase related protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:257,897,766...257,916,434 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:55,967,766...56,003,450 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:125,036,945...125,109,010 JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:46,248,971...46,259,487 JBrowse link
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:187,946,008...187,961,615 JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:131,842,058...131,859,484 JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:10,744,695...10,985,939 JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:83,744,385...83,753,629 JBrowse link
G Scd stearoyl-CoA desaturase acts_upstream_of_or_within TAS
ISO		 MGI:2388371 (PMID:12815040) RGD PMID:12815040 PMID:12896875 RGD:1304415 NCBI chr 1:253,218,968...253,232,101 JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 TAS RGD PMID:16207839 RGD:1580018 NCBI chr 1:243,169,171...243,182,231 JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 acts_upstream_of_or_within ISO (PMID:12815040) RGD PMID:12815040 NCBI chr 1:253,152,519...253,165,216 JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:24,526,700...24,568,168 JBrowse link
G Tecrl2 trans-2,3-enoyl-CoA reductase like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:47,263,647...47,264,682 JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26108493)		 UniProt
RGD		 PMID:26108493 GO_REF:0000024 NCBI chr  X:151,428,334...151,450,115 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 acts_upstream_of_or_within ISO (PMID:11567032) RGD PMID:11567032 NCBI chr 2:220,738,095...220,845,528 JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO
IBA		 (PMID:18554506)
GO_REF:0000033		 RGD
GO_Central		 PMID:18554506 GO_REF:0000033 NCBI chr17:77,081,508...77,106,114 JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in ISO
IBA		 (PMID:18554506)
GO_REF:0000033		 RGD
GO_Central		 PMID:18554506 GO_REF:0000033 NCBI chr11:65,667,671...65,762,903 JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO
IBA		 (PMID:18554506)
GO_REF:0000033		 RGD
GO_Central		 PMID:18554506 GO_REF:0000033 NCBI chr 8:74,396,441...74,433,700 JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in ISO
IBA		 (PMID:18554506)
GO_REF:0000033		 RGD
GO_Central		 PMID:18554506 GO_REF:0000033 NCBI chr 5:102,887,597...102,915,376 JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12482854)		 UniProt
Ensembl
RGD		 PMID:12482854 GO_REF:0000024 GO_REF:0000107 NCBI chr19:24,526,700...24,568,168 JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IBA		 (PMID:20166112)
GO_REF:0000033		 RGD
GO_Central		 PMID:20166112 GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961 JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:23,544,598...23,584,855 JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA		 (PMID:20937905)
(PMID:14581464)
GO_REF:0000033		 RGD
GO_Central		 PMID:14581464 PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115 JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466 JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000104
(PMID:20427700)		 UniProt
GO_Central
RGD		 PMID:20427700 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:78,790,846...78,857,307 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IDA
IBA		 PMID:12005057
GO_REF:0000033		 GO_Central PMID:12005057 GO_REF:0000033, RGD:8554529 NCBI chr 2:220,738,095...220,845,528 JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:39,789,229...39,858,579 JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961 JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in ISO
IBA
IEA		 (PMID:12371743), (PMID:20937905)
GO_REF:0000033
(PMID:12371743), (PMID:21106902)
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:12371743 PMID:20937905 PMID:21106902 GO_REF:0000033 GO_REF:0000104 NCBI chr17:23,544,598...23,584,855 JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA		 (PMID:20937905)
GO_REF:0000033		 RGD
GO_Central		 PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115 JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO
IBA		 (PMID:23479632)
GO_REF:0000033		 RGD
GO_Central		 PMID:23479632 GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466 JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IDA
IBA
IEA
ISO		 PMID:12005057
GO_REF:0000033
GO_REF:0000104
(PMID:20427700), (PMID:20937905)		 GO_Central
UniProt
RGD		 PMID:20427700 PMID:20937905 PMID:12005057 GO_REF:0000033 GO_REF:0000104, RGD:8554529 NCBI chr 8:78,790,846...78,857,307 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:220,738,095...220,845,528 JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:20937905)		 Ensembl
GO_Central
RGD		 PMID:20937905 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:39,789,229...39,858,579 JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO
IBA		 (PMID:20166112), (PMID:20937905)
GO_REF:0000033		 RGD
GO_Central		 PMID:20166112 PMID:20937905 GO_REF:0000033 NCBI chr 5:131,961,478...131,965,961 JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr17:23,544,598...23,584,855 JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO
IBA		 (PMID:20937905)
(PMID:14581464)
GO_REF:0000033		 RGD
GO_Central		 PMID:14581464 PMID:20937905 GO_REF:0000033 NCBI chr 1:244,997,287...245,001,115 JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO
IBA		 (PMID:20937905)
GO_REF:0000033		 RGD
GO_Central		 PMID:20937905 GO_REF:0000033 NCBI chr 8:84,702,916...84,729,466 JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:78,790,846...78,857,307 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
IBA
IDA		 UniProtKB:Q9VV87 (PMID:20937905), (PMID:26214738)
GO_REF:0000033
PMID:12005057		 RGD
GO_Central		 PMID:20937905 PMID:26214738 PMID:12005057 GO_REF:0000033, RGD:8554529 NCBI chr 2:220,738,095...220,845,528 JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in ISO
IBA
IEA		 (PMID:19826053)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:19826053 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:39,789,229...39,858,579 JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 involved_in ISO (PMID:25003994) RGD PMID:25003994 NCBI chr 3:79,990,048...80,113,556 JBrowse link
formaldehyde biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm3a lysine demethylase 3A involved_in ISO
IEA		 (PMID:16603237)
GO_REF:0000107		 RGD
Ensembl		 PMID:16603237 GO_REF:0000107 NCBI chr 4:103,630,907...103,675,073 JBrowse link
fructose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in ISO (PMID:17727625), (PMID:29238976) RGD PMID:17727625 PMID:29238976 NCBI chr 4:63,899,222...63,913,315 JBrowse link
G Sord sorbitol dehydrogenase involved_in ISO
IEA		 (PMID:3365415), (PMID:6870831), (PMID:8487505)
MGI:3616090 (PMID:18799757), (PMID:9604875)
GO_REF:0000107		 RGD
Ensembl		 PMID:3365415 PMID:6870831 PMID:8487505 PMID:9604875 PMID:18799757 GO_REF:0000107 NCBI chr 3:109,184,697...109,216,133 JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:19540876 RGD:9588538 NCBI chr10:7,503,351...7,599,474 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:26430123)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26430123 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962 JBrowse link
G Gad1 glutamate decarboxylase 1 involved_in IDA
ISO
IBA
IEA		 (PMID:9177246)
GO_REF:0000033
(PMID:17384644)
GO_REF:0000107
PMID:1924335		 RGD
GO_Central
Ensembl		 PMID:9177246 PMID:17384644 PMID:17712632 PMID:1924335 GO_REF:0000033 GO_REF:0000107, RGD:6480258, RGD:728511 NCBI chr 3:75,777,260...75,818,099 JBrowse link
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:22108820 GO_REF:0000033, RGD:401900601 NCBI chr17:89,671,718...89,734,246 JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1931872 (PMID:15305132)		 Ensembl
RGD		 PMID:15305132 GO_REF:0000107 NCBI chr 2:57,755,495...57,830,605 JBrowse link
G Slc38a1 solute carrier family 38, member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32668809)		 UniProt
RGD		 PMID:32668809 GO_REF:0000024 NCBI chr 7:129,612,414...129,681,727 JBrowse link
gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:63,889,045...63,902,086 JBrowse link
G Aldoc aldolase, fructose-bisphosphate C involved_in IEA
ISO		 GO_REF:0000107
(PMID:24958256)		 Ensembl
RGD		 PMID:24958256 GO_REF:0000107 NCBI chr10:63,715,544...63,719,133 JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (PMID:11916968) RGD PMID:11916968 NCBI chr13:105,274,103...105,331,653 JBrowse link
G Atf4 activating transcription factor 4 acts_upstream_of_or_within ISO (PMID:11916968) RGD PMID:11916968 NCBI chr 7:113,684,681...113,686,739 JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of ISO (PMID:22275362) RGD PMID:22275362 NCBI chr 5:171,833,854...171,838,229 JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:16148943)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16148943 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:178,007,233...178,017,397 JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20852621)		 UniProt
RGD		 PMID:20852621 GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:30679508) RGD PMID:30679508 NCBI chr 5:160,719,951...160,731,337 JBrowse link
G Eno2 enolase 2 IDA RGD PMID:15720133 RGD:2302795 NCBI chr 4:159,258,371...159,267,220 JBrowse link
G ENSRNOG00000066874 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Fbp1 fructose-bisphosphatase 1 involved_in IDA
ISO
IBA
IEA		 (PMID:30150719)
GO_REF:0000033
(PMID:19259699), (PMID:20096900)
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:19259699 PMID:20096900 PMID:30150719 PMID:4353083 PMID:11440903 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302970 NCBI chr17:2,207,271...2,230,076 JBrowse link
G Fbp2 fructose-bisphosphatase 2 involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:4353083 PMID:11440903 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302970 NCBI chr17:2,236,088...2,253,702 JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 involved_in TAS
IBA
ISO
IEA
IDA		 GO_REF:0000033
(PMID:33359667)
GO_REF:0000041
(PMID:8211187)		 GO_Central
RGD
UniProt		 PMID:8211187 PMID:33359667 PMID:8865366 PMID:11440903 PMID:4353083 More... GO_REF:0000033 GO_REF:0000041, RGD:728661, RGD:2302970, RGD:2302851, RGD:2302850 NCBI chr10:86,307,400...86,318,766 JBrowse link
G G6pc3 glucose 6 phosphatase catalytic subunit 3 involved_in IDA
IBA
ISO
IEA		 GO_REF:0000033
(PMID:15661744)
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:15661744 PMID:4303362 PMID:11440903 PMID:4353083 GO_REF:0000033 GO_REF:0000041, RGD:2302850, RGD:2302970, RGD:2302851 NCBI chr10:87,146,987...87,151,223 JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IDA
ISO
IMP		 (PMID:28258188) RGD PMID:28258188 PMID:15720133 PMID:28258188 RGD:2302795, RGD:13792662 NCBI chr 4:157,962,312...157,967,158 JBrowse link
G Gcg glucagon involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 3:67,522,489...67,531,533 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17545671)		 Ensembl
RGD		 PMID:17545671 GO_REF:0000107 NCBI chr 1:252,306,541...252,337,622 JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12093800) RGD PMID:12093800 NCBI chr 7:130,842,526...130,851,530 JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO MGI:2387347 (PMID:12093800) RGD PMID:12093800 NCBI chr 3:62,209,432...62,346,590 JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in IEA
ISO
IBA		 GO_REF:0000043
(PMID:31891762)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:31891762 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:86,828,211...86,856,077 JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 IMP RGD PMID:25865565 RGD:11342811 NCBI chr19:37,700,023...37,734,551 JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of ISO MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr10:86,132,535...86,140,877 JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of ISO MGI:2155884|MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr 9:6,799,101...6,903,616 JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1856009 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 5:121,409,735...121,593,201 JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in ISO (PMID:12581790) RGD PMID:12581790 NCBI chr12:20,894,269...20,907,225 JBrowse link
G Pc pyruvate carboxylase involved_in IDA
ISO
IBA
IEA		 MGI:2449284|MGI:6382162 (PMID:10938127), (PMID:23423574), (PMID:31006591)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:10938127 PMID:23423574 PMID:31006591 PMID:4353083 PMID:6049928 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302971 NCBI chr 1:211,228,708...211,327,792 JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 TAS
IBA
ISO
IEA
IDA		 GO_REF:0000033
MGI:2449283|MGI:2449284 (PMID:10938127), (PMID:15347677), (PMID:19643083), (PMID:29230018), (PMID:34156032)
(PMID:11916968)
(PMID:26971250), (PMID:30193097)
GO_REF:0000041
PMID:4186849		 GO_Central
RGD
UniProt		 PMID:10938127 PMID:11916968 PMID:15347677 PMID:19643083 PMID:26971250 More... GO_REF:0000033 GO_REF:0000041, RGD:625518, RGD:8553288, RGD:2302971, RGD:2302970, RGD:2302851, RGD:2302850 NCBI chr 3:182,348,572...182,354,521 JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IDA
IBA
ISO
IEA		 GO_REF:0000033
MGI:97501 (PMID:23466304)
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:23466304 PMID:4353083 PMID:6049928 PMID:11440903 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302971, RGD:2302970 NCBI chr15:32,997,853...33,006,691 JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22504074)		 UniProt
RGD		 PMID:22504074 GO_REF:0000024 NCBI chr 9:99,454,828...99,497,069 JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:24958256) RGD PMID:24958256 NCBI chr 1:250,673,152...250,680,762 JBrowse link
G Pgam2 phosphoglycerate mutase 2 IDA RGD PMID:15720133 RGD:2302795 NCBI chr14:84,895,763...84,897,874 JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IDA
ISO
IBA
IMP		 MGI:106918 (PMID:19643083)
GO_REF:0000033		 RGD
GO_Central		 PMID:19643083 PMID:15720133 PMID:3091090 GO_REF:0000033, RGD:2302795, RGD:2302860 NCBI chr  X:75,336,988...75,352,962 JBrowse link
G Pgk1l1 phosphoglycerate kinase 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:44,487,980...44,489,330 JBrowse link
G Pgk2 phosphoglycerate kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:27,976,913...27,978,479 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO MGI:1857774 (PMID:15232616) RGD PMID:15232616 NCBI chr 7:118,712,261...118,780,723 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEP
ISO
IEA
ISS		 (PMID:15716268)
GO_REF:0000107
(PMID:16753578), (PMID:23142079)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15716268 PMID:16753578 PMID:23142079 PMID:21212096 GO_REF:0000024 GO_REF:0000107, RGD:9585757 NCBI chr14:63,073,505...63,729,215 JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A acts_upstream_of ISO (PMID:20876121) RGD PMID:20876121 NCBI chr 6:120,302,508...120,365,907 JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B acts_upstream_of ISO (PMID:20876121) RGD PMID:20876121 NCBI chr14:107,118,116...107,166,121 JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO
IEA		 (PMID:18466349)
(PMID:16034410)
GO_REF:0000107		 RGD
Ensembl		 PMID:16034410 PMID:18466349 GO_REF:0000107 NCBI chr 1:235,893,917...235,901,315 JBrowse link
G Sds serine dehydratase involved_in TAS
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11906824 GO_REF:0000041, RGD:633956 NCBI chr12:36,083,226...36,090,540 JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:22837305)		 Ensembl
RGD		 PMID:22837305 GO_REF:0000107 NCBI chr 6:122,952,552...122,967,271 JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35507647)		 Ensembl
RGD		 PMID:35507647 GO_REF:0000107 NCBI chr10:55,856,209...55,859,060 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in IEA
ISO		 GO_REF:0000107
MGI:3028639 (PMID:14701727)		 Ensembl
RGD		 PMID:14701727 GO_REF:0000107 NCBI chr 4:35,145,721...35,328,403 JBrowse link
G Slc37a4 solute carrier family 37 member 4 involved_in ISO (PMID:28973635) RGD PMID:28973635 NCBI chr 8:53,619,952...53,626,110 JBrowse link
G Slc39a14 solute carrier family 39 member 14 acts_upstream_of ISO (PMID:21445361) RGD PMID:21445361 NCBI chr15:51,786,517...51,833,260 JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA
ISO
IBA		 GO_REF:0000041
(PMID:31891762)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:31891762 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:159,301,558...159,305,088 JBrowse link
G Tpi1l1 triosephosphate isomerase 1 like 1 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 8:23,647,760...23,654,967 JBrowse link
G Tpi1l2 triosephosphate isomerase 1 like 2 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr17:27,101,431...27,102,823 JBrowse link
G Wdr5 WD repeat domain 5 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1343094|MGI:95674 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 3:10,836,964...10,856,682 JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:22228304)
GO_REF:0000033
GO_REF:0000024
(PMID:16899818), (PMID:22049910)		 Ensembl
RGD
GO_Central
UniProt		 PMID:16899818 PMID:22049910 PMID:22228304 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:49,344,616...49,416,900 JBrowse link
G Gls2 glutaminase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:617,252...633,424 JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) RGD PMID:11032875 NCBI chr16:9,640,312...9,673,961 JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:56,097,166...56,191,841 JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:4403443 PMID:28323 GO_REF:0000002 GO_REF:0000033, RGD:2301548, RGD:2301547 NCBI chr13:68,519,500...68,585,554 JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain involved_in
NOT|involved_in		 IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:33,416,362...33,447,919 JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 PMID:17545671
(PMID:17545671)
GO_REF:0000107		 RGD
Ensembl		 PMID:17545671 PMID:17545671 GO_REF:0000107, RGD:8553472 NCBI chr 1:252,306,541...252,337,622 JBrowse link
G Lep leptin IDA RGD PMID:21068181 RGD:5128556 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO
IEA
IDA		 (PMID:26755581)
GO_REF:0000107		 RGD
Ensembl		 PMID:26755581 PMID:26755581 GO_REF:0000107, RGD:10679995 NCBI chr10:13,999,782...14,002,408 JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA		 PMID:4186849
MGI:2182390 (PMID:11792850)
GO_REF:0000033		 RGD
GO_Central		 PMID:11792850 PMID:4186849 GO_REF:0000033, RGD:8553288 NCBI chr 3:182,348,572...182,354,521 JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,997,853...33,006,691 JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:121,757,400...121,828,721 JBrowse link
G Sardh sarcosine dehydrogenase TAS RGD PMID:9839943 RGD:634034 NCBI chr 3:10,510,553...10,575,342 JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 IDA from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr10:45,968,959...45,990,341 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chr 7:63,358,961...63,364,293 JBrowse link
G Tha1 threonine aldolase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,094,681...103,100,169 JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000065410 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Shmt1 serine hydroxymethyltransferase 1 involved_in IDA
IBA		 in the presence of tetrahydrofolate
GO_REF:0000033		 GO_Central
RGD		 PMID:3110140 GO_REF:0000033, RGD:2300383 NCBI chr10:45,968,959...45,990,341 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IDA
IBA		 in the presence of tetrahydrofolate
GO_REF:0000033		 GO_Central
RGD		 PMID:3110140 GO_REF:0000033, RGD:2300383 NCBI chr 7:63,358,961...63,364,293 JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase involved_in IDA
IBA
ISO		 GO_REF:0000033
(PMID:22198249)		 GO_Central
RGD		 PMID:22198249 PMID:12383475 GO_REF:0000033, RGD:1599457 NCBI chr 9:101,122,793...101,132,746 JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) RGD PMID:20018850 NCBI chr 2:61,063,416...61,104,828 JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000069013 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Park7 Parkinsonism associated deglycase involved_in ISO
IBA
ISS		 (PMID:22523093)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
ParkinsonsUK-UCL		 PMID:22523093 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:166,636,551...166,659,825 JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in IDA PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chr10:54,958,263...54,970,542 JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IDA
IBA		 PMID:23382512
GO_REF:0000033		 GO_Central PMID:23382512 GO_REF:0000033, RGD:8554649 NCBI chr10:53,863,060...53,874,938 JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IDA PMID:23382512 RGD
UniProt		 PMID:15123652 PMID:23382512 RGD:5509794, RGD:8554649 NCBI chr10:55,559,060...55,567,535 JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IDA
IBA		 PMID:23382512
GO_REF:0000033		 GO_Central PMID:23382512 GO_REF:0000033, RGD:8554649 NCBI chr10:53,892,496...53,901,812 JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in ISO
IBA
IDA		 (PMID:12881489), (PMID:17045234)
(PMID:17045234), (PMID:22832496)
GO_REF:0000033
PMID:23382512		 RGD
GO_Central		 PMID:12881489 PMID:17045234 PMID:22832496 PMID:23382512 GO_REF:0000033, RGD:8554649 NCBI chr10:54,329,224...54,353,167 JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in ISO
ISS		 (PMID:21046276)
GO_REF:0000024		 RGD
UniProt		 PMID:21046276 GO_REF:0000024 NCBI chr 2:198,338,005...198,346,007 JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO
ISS		 (PMID:21046276)
GO_REF:0000024		 RGD
UniProt		 PMID:21046276 GO_REF:0000024 NCBI chr 2:195,624,015...195,628,774 JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:195,566,701...195,572,149 JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO
ISS		 (PMID:21046276)
GO_REF:0000024		 RGD
UniProt		 PMID:21046276 GO_REF:0000024 NCBI chr 1:210,767,237...210,770,242 JBrowse link
hexose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst15 carbohydrate sulfotransferase 15 involved_in ISO
IBA
IEA
ISS		 (PMID:11572857)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:11572857 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:187,028,860...187,107,908 JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 involved_in ISO
IEA		 (PMID:10934207)
GO_REF:0000107		 RGD
Ensembl		 PMID:10934207 GO_REF:0000107 NCBI chr 8:93,084,548...93,167,255 JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16447251)		 Ensembl
RGD		 PMID:16447251 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945 JBrowse link
hypochlorous acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpo myeloperoxidase acts_upstream_of_or_within ISO MGI:2176344 (PMID:10085024) RGD PMID:10085024 NCBI chr10:73,092,124...73,102,057 JBrowse link
icosanoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in NAS PMID:15123652 UniProt PMID:15123652 RGD:5509794 NCBI chr10:55,559,060...55,567,535 JBrowse link
G Cyp2c11 cytochrome P450, subfamily 2, polypeptide 11 involved_in IDA PMID:15766564 UniProt PMID:15766564 RGD:14402444 NCBI chr 1:246,175,216...246,211,445 JBrowse link
G Cyp2c23 cytochrome P450, family 2, subfamily c, polypeptide 23 involved_in IDA PMID:15766564 UniProt PMID:15766564 RGD:14402444 NCBI chr 1:242,889,218...242,913,869 JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (PMID:15766564) RGD PMID:15766564
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12857783 GO_REF:0000033, RGD:1625451 NCBI chr 5:129,123,323...129,137,464 JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12857783 GO_REF:0000033, RGD:1625451 NCBI chr 5:128,922,355...128,934,188 JBrowse link
G Cyp4a2l1 cytochrome P450, family 4, subfamily a, polypeptide 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:129,010,501...129,021,087 JBrowse link
G Cyp4a3 cytochrome P450, family 4, subfamily a, polypeptide 3 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12857783 GO_REF:0000033, RGD:1625451 NCBI chr 5:129,097,571...129,115,488 JBrowse link
G Cyp4a8 cytochrome P450, family 4, subfamily a, polypeptide 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:128,702,130...128,733,476 JBrowse link
G Pla2g4a phospholipase A2 group 4A acts_upstream_of_or_within ISO (PMID:17293613) RGD PMID:17293613 NCBI chr13:64,427,921...64,572,352 JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:8894685)
GO_REF:0000107
GO_REF:0000033
MGI:1857117|MGI:2681791|MGI:2683027 (PMID:10720488), (PMID:1618849), (PMID:2015347), (PMID:7592575), (PMID:7731963), (PMID:8663040), (PMID:8894685), (PMID:9272950)
(PMID:8672487)		 UniProt
RGD
Ensembl
GO_Central		 PMID:1618849 PMID:2015347 PMID:7592575 PMID:7731963 PMID:8663040 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:152,398,745...152,422,854 JBrowse link
G Ak1 adenylate kinase 1 IDA RGD PMID:19049516 RGD:5134369 NCBI chr 3:36,310,113...36,320,760 JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:91,462,781...91,484,057 JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:63,104,113...63,135,232 JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA
IBA
IDA
ISO		 GO_REF:0000041
GO_REF:0000033
PMID:6773943
PMID:885873
PMID:23504145
PMID:19188364
UniProtKB:P11986 (PMID:23902760)		 UniProt
GO_Central
RGD		 PMID:23902760 PMID:6773943 PMID:885873 PMID:23504145 PMID:19188364 GO_REF:0000033 GO_REF:0000041, RGD:153298956, RGD:153298936, RGD:153298945, RGD:153298950 NCBI chr16:18,873,119...18,876,116 JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:117,594,177...117,613,266 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000033
MGI:5635272 (PMID:24657168)
GO_REF:0000107		 InterPro
GO_Central
RGD
Ensembl		 PMID:24657168 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:118,362,154...118,388,668 JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:11502751)
GO_REF:0000033		 RGD
GO_Central		 PMID:11502751 GO_REF:0000033 NCBI chr20:5,225,706...5,247,293 JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000033
MGI:3583918 (PMID:15939867)		 InterPro
GO_Central
RGD		 PMID:15939867 GO_REF:0000002 GO_REF:0000033 NCBI chr20:17,216,151...17,250,826 JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:15,396,691...15,441,648 JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:127,179,841...127,188,405 JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:94,601,072...94,696,180 JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:91,628,606...91,650,182 JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:128,737,857...128,781,408 JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:105,727,906...105,838,159 JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C, gamma 1 IMP RGD PMID:16973916 RGD:2299886 NCBI chr 3:169,805,299...169,836,040 JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9013981)		 Ensembl
RGD		 PMID:9013981 GO_REF:0000107 NCBI chr19:62,456,196...62,592,684 JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO MGI:1856024|MGI:1856025 (PMID:11371619) RGD PMID:11371619 NCBI chr11:3,316,818...3,334,804 JBrowse link
G Ptafr platelet-activating factor receptor acts_upstream_of_or_within ISO (PMID:9013981) RGD PMID:9013981 NCBI chr 5:150,049,322...150,079,060 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) RGD PMID:12641450 NCBI chr 5:128,035,714...128,110,015 JBrowse link
ketone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt6 sirtuin 6 involved_in ISO (PMID:30530497) RGD PMID:30530497 NCBI chr 7:8,082,312...8,087,776 JBrowse link
ketone body biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:22847177), (PMID:22865860), (PMID:9200711)		 GO_Central
Ensembl
RGD		 PMID:9200711 PMID:22847177 PMID:22865860 PMID:2573547 GO_REF:0000033 GO_REF:0000107, RGD:1599519 NCBI chr 5:153,461,738...153,475,552 JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22847177), (PMID:22865860)		 UniProt
GO_Central
RGD		 PMID:22847177 PMID:22865860 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:76,757,301...76,887,300 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in TAS
ISO
IEP		 (PMID:23751782) RGD PMID:23751782 PMID:8097464 PMID:12399220 RGD:728598, RGD:2326121 NCBI chr 2:185,875,609...185,903,505 JBrowse link
G Slc27a5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO MGI:3757682 (PMID:16618416) RGD PMID:16618416 NCBI chr 1:82,688,742...82,699,335 JBrowse link
kynurenic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3505776 (PMID:19234212)		 Ensembl
RGD		 PMID:19234212 GO_REF:0000107 NCBI chr16:74,133,259...74,145,328 JBrowse link
G Kmo kynurenine 3-monooxygenase IMP RGD PMID:15829251 RGD:13513901 NCBI chr13:90,089,340...90,121,108 JBrowse link
L-arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in NAS
IEA
ISO
ISS		 GO_REF:0000041
(PMID:22081021)
(PMID:11747432), (PMID:11747433)
GO_REF:0000024		 UniProt
RGD		 PMID:11747432 PMID:11747433 PMID:22081021 PMID:2789519 GO_REF:0000024 GO_REF:0000041, RGD:632221 NCBI chr12:26,659,664...26,677,136 JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IBA
IMP
ISO
IEA		 GO_REF:0000033
PMID:19491403
(PMID:18473344), (PMID:27287393), (PMID:8792870)
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:8792870 PMID:18473344 PMID:27287393 PMID:12470967 PMID:19491403 GO_REF:0000033 GO_REF:0000041, RGD:631755, RGD:12859071 NCBI chr 3:14,747,355...14,796,909 JBrowse link
G Nags N-acetylglutamate synthase involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr10:87,098,330...87,102,465 JBrowse link
G Otc ornithine transcarbamylase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:15,126,358...15,202,473 JBrowse link
L-ascorbic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within		 IMP
ISO		 PMID:22820017
(PMID:15769935)
MGI:4239556 (PMID:20410296)		 RGD PMID:15769935 PMID:20410296 PMID:22820017 RGD:13825440 NCBI chr 5:135,329,605...135,367,037 JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in ISO MGI:5008171 (PMID:20410296) RGD PMID:20410296 NCBI chr 4:63,899,222...63,913,315 JBrowse link
G Gsto1 glutathione S-transferase omega 1 IMP RGD PMID:9786866 RGD:70644 NCBI chr 1:256,662,377...256,672,515 JBrowse link
G Gulo gulonolactone (L-) oxidase involved_in ISS
IEA		 GO_REF:0000024
GO_REF:0000107		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,205,677...40,227,766 JBrowse link
G Rgn regucalcin involved_in ISS
ISO
IBA		 GO_REF:0000024
MGI:2670511 (PMID:16585534), (PMID:23349732)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:16585534 PMID:23349732 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:1,619,030...1,634,456 JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:36,752,061...36,769,970 JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 IDA RGD PMID:16489927 RGD:13504861 NCBI chr 1:252,306,541...252,337,622 JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IDA RGD PMID:16489927 RGD:13504861 NCBI chr19:9,180,428...9,206,113 JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 IDA RGD PMID:11733007 RGD:1582175 NCBI chr 1:96,040,407...96,060,008 JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:249,325,082...249,357,383 JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:109,462,645...109,478,021 JBrowse link
G Noxred1 NADP-dependent oxidoreductase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:106,862,350...106,888,113 JBrowse link
G Oat ornithine aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:196,777,973...196,797,754 JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IEA
ISO
IBA		 GO_REF:0000041
(PMID:23024808), (PMID:28258219)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:23024808 PMID:28258219 GO_REF:0000033 GO_REF:0000041 NCBI chr10:105,917,732...105,922,658 JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr13:92,626,462...92,630,256 JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000041
(PMID:23024808), (PMID:36414121)
GO_REF:0000033
GO_REF:0000024		 UniProt
RGD
GO_Central		 PMID:23024808 PMID:36414121 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:109,484,263...109,489,554 JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011698.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Phgdh phosphoglycerate dehydrogenase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:185,906,962...185,936,054 JBrowse link
G Psat1 phosphoserine aminotransferase 1 involved_in ISO
IBA		 (PMID:37627284)
GO_REF:0000033		 RGD
GO_Central		 PMID:37627284 GO_REF:0000033 NCBI chr 1:222,623,553...222,646,187 JBrowse link
G Psph phosphoserine phosphatase involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:14673469)		 UniProt
GO_Central
RGD		 PMID:14673469 GO_REF:0000024 GO_REF:0000033 NCBI chr12:26,882,524...26,905,084 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 IDA RGD PMID:10457370 RGD:2300380 NCBI chr 7:63,358,961...63,364,293 JBrowse link
lactate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatd1 glutamine amidotransferase class 1 domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:196,504,533...196,512,561 JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:207,272,738...207,421,998 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22523093) RGD PMID:22523093 NCBI chr 5:166,636,551...166,659,825 JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23977055)		 UniProt
RGD		 PMID:23977055 GO_REF:0000024 NCBI chr 9:99,454,828...99,497,069 JBrowse link
lactate biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:17708681) RGD PMID:17708681 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Ldhc lactate dehydrogenase C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18367675)
GO_REF:0000107		 RGD
Ensembl		 PMID:18367675 GO_REF:0000107 NCBI chr 1:97,385,984...97,403,382 JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24282679), (PMID:31664810)
(PMID:31642348)		 UniProt
Ensembl
RGD		 PMID:24282679 PMID:31642348 PMID:31664810 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:151,203,948...151,251,126 JBrowse link
leukotriene biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in
acts_upstream_of_or_within		 TAS
ISO
ISS		 (PMID:7809134)
(PMID:19075240)
GO_REF:0000024
(PMID:21233389), (PMID:24893149)		 RGD
UniProt		 PMID:7809134 PMID:19075240 PMID:21233389 PMID:24893149 PMID:3417684 GO_REF:0000024, RGD:632194 NCBI chr 4:151,203,948...151,251,126 JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA		 MGI:2156546 (PMID:19075240), (PMID:9091580)
GO_REF:0000033
(PMID:2300173)		 RGD
GO_Central		 PMID:2300173 PMID:9091580 PMID:19075240 PMID:2300173 PMID:19075240 GO_REF:0000033, RGD:69749, RGD:2313889 NCBI chr12:10,785,254...10,809,295 JBrowse link
G Camp cathelicidin antimicrobial peptide IDA RGD PMID:24990383 RGD:442380204 NCBI chr 8:109,841,729...109,843,543 JBrowse link
G Fcer1a Fc epsilon receptor Ia acts_upstream_of_or_within ISO (PMID:9000133) RGD PMID:9000133 NCBI chr13:88,218,427...88,224,723 JBrowse link
G Lta4h leukotriene A4 hydrolase involved_in ISO
IBA
ISS		 (PMID:11675384), (PMID:15078870), (PMID:9774412)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9774412 PMID:11675384 PMID:15078870 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:27,969,796...28,001,600 JBrowse link
G Ltc4s leukotriene C4 synthase involved_in TAS
IEA
IBA
IDA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central
RGD		 PMID:12767051 PMID:14637132 GO_REF:0000033 GO_REF:0000104, RGD:724432, RGD:2302289 NCBI chr10:35,060,002...35,066,466 JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO
IBA		 (PMID:23409838), (PMID:8703034), (PMID:9092565)
GO_REF:0000033		 RGD
GO_Central		 PMID:8703034 PMID:9092565 PMID:23409838 GO_REF:0000033 NCBI chr 2:135,679,524...135,715,828 JBrowse link
G Mgst3 microsomal glutathione S-transferase 3 involved_in ISO (PMID:9278457) RGD PMID:9278457 NCBI chr13:79,526,541...79,547,479 JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:16005851) RGD PMID:16005851 NCBI chr12:46,802,932...46,814,511 JBrowse link
G Pla2g4a phospholipase A2 group 4A involved_in ISO
IEA		 (PMID:18451993)
(PMID:9403693)
GO_REF:0000043
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:9403693 PMID:18451993 GO_REF:0000043 GO_REF:0000107 NCBI chr13:64,427,921...64,572,352 JBrowse link
G Pla2g5 phospholipase A2, group V involved_in IDA
IEA
ISO		 GO_REF:0000107
(PMID:20432503)		 Ensembl
RGD		 PMID:20432503 PMID:11106649 GO_REF:0000107, RGD:2303037 NCBI chr 5:156,324,628...156,393,065 JBrowse link
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 involved_in ISO (PMID:10318872) RGD PMID:10318872 NCBI chr 3:70,071,970...70,078,103 JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2384078 (PMID:9000133)		 Ensembl
RGD		 PMID:9000133 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927 JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044631.2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911), (PMID:21447318) RGD PMID:14754911 PMID:21447318 NCBI chr20:13,074,695...13,104,095 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA
ISS		 (PMID:1676842), (PMID:21447318)
MGI:2182354 (PMID:12163373), (PMID:9774450)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:1676842 PMID:9774450 PMID:12163373 PMID:21447318 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:13,043,255...13,071,523 JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htd2 hydroxyacyl-thioester dehydratase type 2 acts_upstream_of_or_within ISO (PMID:33774475) RGD PMID:33774475 NCBI chr 2:105,222,958...105,223,419 JBrowse link
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
UniProtKB:P60716 (PMID:11389890)		 GO_Central
RGD		 PMID:11389890 GO_REF:0000033 NCBI chr14:43,230,369...43,247,469 JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO		 GO_REF:0000024
(PMID:8250832)		 UniProt
RGD		 PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542 JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15708862)		 UniProt
Ensembl
RGD		 PMID:15708862 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,559,060...55,567,535 JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:27145229)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:27145229 GO_REF:0000024 GO_REF:0000107 NCBI chr10:53,892,496...53,901,812 JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO		 GO_REF:0000024
(PMID:8250832)		 UniProt
RGD		 PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542 JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11381125 GO_REF:0000033, RGD:68727 NCBI chr 8:54,991,294...55,047,276 JBrowse link
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,683,846...1,715,517 JBrowse link
G Acsbg3 acyl-CoA synthetase bubblegum family member 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,715,613...1,727,637 JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:229,865,662...229,973,253 JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
ISS		 (PMID:20937905)
GO_REF:0000024		 RGD
UniProt		 PMID:20937905 GO_REF:0000024 NCBI chr 2:220,738,095...220,845,528 JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:216,252,605...216,267,618 JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27791009)		 UniProt
Ensembl
RGD		 PMID:27791009 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:195,667,940...195,685,315 JBrowse link
G Ltc4s leukotriene C4 synthase involved_in ISO
IEA
ISS		 (PMID:27791009)
GO_REF:0000104
GO_REF:0000024		 RGD
UniProt		 PMID:27791009 GO_REF:0000024 GO_REF:0000104 NCBI chr10:35,060,002...35,066,466 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005 (PMID:1150661) RGD PMID:1150661 NCBI chr 8:84,692,524...84,860,564 JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO MGI:1856065 (PMID:1150661) RGD PMID:1150661 NCBI chr  X:104,933,921...104,993,317 JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856539 (PMID:1150661)		 Ensembl
RGD		 PMID:1150661 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568 JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:25,422,526...25,427,514 JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:142,626,748...142,707,892 JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,996,010...2,051,311 JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO
IEA		 (PMID:10578051)
GO_REF:0000107		 RGD
Ensembl		 PMID:10578051 GO_REF:0000107 NCBI chr 5:162,686,562...162,779,309 JBrowse link
G Olah oleoyl-ACP hydrolase involved_in ISO
IDA		 (PMID:26663084)
PMID:8446599		 RGD PMID:26663084 PMID:8446599 RGD:13524614 NCBI chr17:79,786,441...79,811,692 JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:9,210,443...9,215,852 JBrowse link
menaquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubiad1 UbiA prenyltransferase domain containing 1 involved_in ISO
IBA
ISS
IEA		 (PMID:23169578)
GO_REF:0000033
GO_REF:0000024
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:23169578 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 5:164,139,714...164,167,777 JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase IDA RGD PMID:15845641 RGD:1359026 NCBI chr 2:26,594,852...26,614,429 JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA RGD PMID:15845641 PMID:11730351 RGD:1359026, RGD:1601423 NCBI chr17:62,911,705...62,996,544 JBrowse link
methylglyoxal biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A IMP RGD PMID:21890532 RGD:13673877 NCBI chr 1:181,402,275...181,407,476 JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:159,301,558...159,305,088 JBrowse link
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scd stearoyl-CoA desaturase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:10899171), (PMID:26098370)
SGD:S000003023 (PMID:16443825)		 GO_Central
RGD		 PMID:10899171 PMID:16443825 PMID:26098370 GO_REF:0000033 NCBI chr 1:253,218,968...253,232,101 JBrowse link
G Scd2 stearoyl-Coenzyme A desaturase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:16443825)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:16443825 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:243,169,171...243,182,231 JBrowse link
G Scd3 stearoyl-coenzyme A desaturase 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
SGD:S000003023 (PMID:16443825)		 GO_Central
RGD		 PMID:16443825 GO_REF:0000033 NCBI chr 1:243,093,057...243,114,451 JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:12815040)
(PMID:16443825)		 GO_Central
RGD		 PMID:12815040 PMID:16443825 GO_REF:0000033 NCBI chr 1:253,152,519...253,165,216 JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in TAS
ISO
IC
IEA		 MGI:2182685|MGI:3713799 (PMID:11929971), (PMID:17549255)
(PMID:14707127), (PMID:31121216)
PMID:9305887
GO_REF:0000107		 RGD
Ensembl		 PMID:11929971 PMID:14707127 PMID:17549255 PMID:31121216 PMID:15330759 More... GO_REF:0000107, RGD:1358725, RGD:401901241 NCBI chr 5:63,062,953...63,103,320 JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in ISO
IBA
IDA		 (PMID:16237198)
GO_REF:0000033		 RGD
GO_Central		 PMID:16237198 PMID:16237198 GO_REF:0000033, RGD:8554804 NCBI chr 3:139,826,549...139,841,655 JBrowse link
G Nans N-acetylneuraminate synthase involved_in ISO (PMID:31121216) RGD PMID:31121216 NCBI chr 5:60,780,441...60,797,583 JBrowse link
negative regulation of (R)-mevalonic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir185 microRNA 185 involved_in ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:24296663) RGD PMID:24296663 NCBI chr11:82,664,716...82,664,795 JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19584291)		 Ensembl
RGD		 PMID:19584291 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:76,517,164...76,639,925 JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:175,672,834...175,715,867 JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP		 (PMID:19342457)
GO_REF:0000107		 RGD
Ensembl		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828 JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within		 ISO (PMID:12815072)
MGI:1928271 (PMID:23747249)		 RGD PMID:12815072 PMID:23747249 NCBI chr 1:209,485,813...209,490,267 JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO MGI:1096383|MGI:2154956 (PMID:23747249) RGD PMID:23747249 NCBI chr17:83,327,372...84,039,558 JBrowse link
G Mir33 microRNA 33 involved_in ISO (PMID:23536474) RGD PMID:23536474 NCBI chr 7:115,593,952...115,594,020 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:16488887) RGD PMID:16488887 NCBI chr13:104,196,615...104,251,007 JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO (PMID:16549446) RGD PMID:16549446 NCBI chr 7:64,756,626...64,761,570 JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) RGD PMID:15947108 NCBI chr14:2,185,489...2,204,191 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:15243130) RGD PMID:15243130 NCBI chr 2:226,689,745...226,805,897 JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in IDA
ISO
IEA		 (PMID:1917954)
GO_REF:0000107		 RGD
Ensembl		 PMID:1917954 PMID:9225228 GO_REF:0000107, RGD:10059686 NCBI chr 1:88,481,889...88,485,816 JBrowse link
G Chlsn cholesin involved_in ISO (PMID:38503280) RGD PMID:38503280 NCBI chr12:15,185,728...15,289,042 JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:242,921,147...242,956,472 JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:65,017,654...65,034,184 JBrowse link
G Idi2 isopentenyl-diphosphate delta isomerase 2 acts_upstream_of_or_within ISO (PMID:17202134) RGD PMID:17202134 NCBI chr17:61,331,385...61,334,987 JBrowse link
G Insig1 insulin induced gene 1 involved_in ISO (PMID:26311497) RGD PMID:26311497 NCBI chr 4:8,049,339...8,057,812 JBrowse link
G Mir185 microRNA 185 acts_upstream_of ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:23951060), (PMID:24296663) RGD PMID:23951060 PMID:24296663 NCBI chr11:82,664,716...82,664,795 JBrowse link
G Mir342 microRNA 342 acts_upstream_of ISO (PMID:23951060) RGD PMID:23951060 NCBI chr 6:127,565,269...127,565,367 JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:30195495) RGD PMID:30195495 NCBI chr  X:20,981,235...20,981,342 JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:47,708,157...47,807,389 JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
IEA		 (PMID:19584291)
GO_REF:0000107		 RGD
Ensembl		 PMID:19584291 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416 JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) RGD PMID:19584291 NCBI chr 8:76,517,164...76,639,925 JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) RGD PMID:16981135 NCBI chr 1:175,672,834...175,715,867 JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
IMP		 (PMID:19342457)
GO_REF:0000107		 RGD
Ensembl		 PMID:19342457 PMID:19342457 GO_REF:0000107, RGD:4891166 NCBI chr14:30,859,109...30,879,828 JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (PMID:15639194) RGD PMID:15639194 NCBI chr 9:68,333,981...68,372,149 JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA
ISO		 GO_REF:0000107
(PMID:15639194)		 Ensembl
RGD		 PMID:15639194 GO_REF:0000107 NCBI chr10:55,231,558...55,236,786 JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:15576844) RGD PMID:15576844 NCBI chr 1:79,347,057...79,350,340 JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:11060345), (PMID:18635818) RGD PMID:11060345 PMID:18635818 NCBI chr 8:46,531,478...46,533,658 JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
ISS		 (PMID:16326698)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:16326698 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,917,693...86,978,012 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP PMID:16054098 UniProt PMID:16054098 RGD:11059593 NCBI chr 1:90,171,401...90,187,810 JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in IDA PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 5:24,174,505...24,184,202 JBrowse link
G Dcaf5 DDB1 and CUL4 associated factor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:99,171,506...99,260,183 JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr 1:242,921,147...242,956,472 JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) RGD PMID:24217618 NCBI chr16:65,017,654...65,034,184 JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO MGI:1920249 (PMID:16100574) RGD PMID:16100574 NCBI chr 4:8,049,339...8,057,812 JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1916289 (PMID:16100574)		 Ensembl
RGD		 PMID:16100574 GO_REF:0000107 NCBI chr13:32,472,390...32,500,139 JBrowse link
G Klhl25 kelch-like family member 25 involved_in ISO (PMID:27664236) RGD PMID:27664236 NCBI chr 1:129,724,894...129,750,142 JBrowse link
G Mir185 microRNA 185 acts_upstream_of ISO (PMID:23951060) RGD PMID:23951060 NCBI chr11:82,664,716...82,664,795 JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 5:134,349,237...134,349,325 JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of ISO (PMID:23749231) RGD PMID:23749231 NCBI chr 9:25,757,342...25,757,425 JBrowse link
G Mir342 microRNA 342 acts_upstream_of ISO (PMID:23951060) RGD PMID:23951060 NCBI chr 6:127,565,269...127,565,367 JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in ISO (PMID:16794074) RGD PMID:16794074 NCBI chr 3:161,269,939...161,275,533 JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:23932781)		 Ensembl
RGD		 PMID:23932781 GO_REF:0000107 NCBI chr 5:156,919,029...157,027,127 JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17767906)		 GO_Central
RGD		 PMID:17767906 GO_REF:0000033 NCBI chr 5:145,491,460...145,559,631 JBrowse link
negative regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:11479628)		 UniProt
RGD		 PMID:11479628 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244 JBrowse link
G C1qtnf12 C1q and TNF related 12 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:22275362)		 GO_Central
RGD		 PMID:22275362 GO_REF:0000033 NCBI chr 5:171,833,854...171,838,229 JBrowse link
G C1qtnf3 C1q and TNF related 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:20952387) RGD PMID:20952387 NCBI chr 2:59,917,099...59,939,519 JBrowse link
G Clk2 CDC-like kinase 2 involved_in ISO (PMID:20074525) RGD PMID:20074525 NCBI chr 2:176,868,423...176,880,412 JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28790135), (PMID:29937374)		 UniProt
RGD		 PMID:28790135 PMID:29937374 GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092 JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:30193097) RGD PMID:30193097 NCBI chr 7:114,987,857...115,058,652 JBrowse link
G Erfe erythroferrone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:99,404,512...99,412,383 JBrowse link
G Gck glucokinase involved_in ISO
IEA
ISS		 (PMID:8878425)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8878425 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,999,019...85,041,098 JBrowse link
G Il6 interleukin 6 IDA In liver RGD PMID:16308834 RGD:2306940 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:207,272,738...207,421,998 JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:16753578), (PMID:23142079) RGD PMID:16753578 PMID:23142079 NCBI chr10:86,132,535...86,140,877 JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856009 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 5:121,409,735...121,593,201 JBrowse link
G Mst1 macrophage stimulating 1 involved_in ISO (PMID:19720831) RGD PMID:19720831 NCBI chr 8:117,646,485...117,652,016 JBrowse link
G Mtcl2 microtubule crosslinking factor 2 involved_in ISO (PMID:20813965) RGD PMID:20813965 NCBI chr 3:145,669,102...145,741,578 JBrowse link
G Mup4l1 major urinary protein 4 like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:80,223,093...80,226,566 JBrowse link
G Obp2a odorant binding protein 2A acts_upstream_of_or_within ISO MGI:2137691 (PMID:21135134) RGD PMID:21135134 NCBI chr 3:28,904,024...28,907,391 JBrowse link
G Pgp phosphoglycolate phosphatase involved_in IMP
IEA
ISO		 PMID:26755581
GO_REF:0000107
(PMID:26755581)		 Ensembl
RGD		 PMID:26755581 PMID:26755581 GO_REF:0000107, RGD:10679995 NCBI chr10:13,999,782...14,002,408 JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22837305)		 Ensembl
RGD		 PMID:22837305 GO_REF:0000107 NCBI chr 6:122,952,552...122,967,271 JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:16148943)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16148943 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,947,104...9,958,729 JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23142079), (PMID:25009184) RGD PMID:23142079 PMID:25009184 NCBI chr 7:8,082,312...8,087,776 JBrowse link
G Tcf7l2 transcription factor 7 like 2 IMP RGD PMID:21901280 RGD:152995490 NCBI chr 1:264,791,335...264,984,225 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:28655758)		 UniProt
Ensembl
RGD		 PMID:28655758 GO_REF:0000024 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018 JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in IDA PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chr16:18,873,119...18,876,116 JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7782310) RGD PMID:7782310 NCBI chr14:95,598,650...95,631,326 JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:7535379 RGD:7777104 NCBI chr 1:237,818,950...239,052,184 JBrowse link
negative regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prl prolactin involved_in ISO (PMID:24530842) RGD PMID:24530842 NCBI chr17:38,287,355...38,298,234 JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir204 microRNA 204 involved_in ISO (PMID:29441883) RGD PMID:29441883 NCBI chr 1:220,316,931...220,317,040 JBrowse link
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:3863495) RGD PMID:3863495 NCBI chr15:82,258,243...82,427,546 JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:20042607)		 Ensembl
RGD		 PMID:20042607 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000 JBrowse link
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000104
(PMID:12140278)		 UniProt
RGD		 PMID:12140278 GO_REF:0000024 GO_REF:0000104 NCBI chr13:39,200,412...39,245,954 JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:71,020,884...71,037,779 JBrowse link
G Prmt3 protein arginine methyltransferase 3 involved_in ISO
IEA
ISS		 (PMID:33495566)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:33495566 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:99,492,712...99,581,774 JBrowse link
negative regulation of testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkkl1 dickkopf like acrosomal protein 1 involved_in ISO (PMID:18818293) RGD PMID:18818293 NCBI chr 1:95,694,010...95,699,259 JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA		 (PMID:12949260)
GO_REF:0000107		 RGD
Ensembl		 PMID:12949260 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:19502595) RGD PMID:19502595 NCBI chr 3:176,667,476...176,671,965 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:18485278), (PMID:19502595) RGD PMID:18485278 PMID:19502595 NCBI chr11:99,686,934...99,690,349 JBrowse link
nucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:33833118)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:33833118 GO_REF:0000024 GO_REF:0000107 NCBI chr16:44,066,952...44,098,654 JBrowse link
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:33833118)		 UniProt
RGD		 PMID:33833118 GO_REF:0000024 NCBI chr 9:14,481,296...14,484,034 JBrowse link
G Qng1 Q-nucleotide N-glycosylase 1 involved_in ISO (PMID:36610787) RGD PMID:36610787 NCBI chr17:6,281,377...6,288,976 JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:30,886,313...30,903,313 JBrowse link
G Moxd1 monooxygenase, DBH-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:21,075,124...21,165,348 JBrowse link
G Moxd2 monooxygenase, DBH-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:69,724,693...69,733,188 JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761 PMID:26297558 NCBI chr 1:249,325,082...249,357,383 JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO
IEA		 (PMID:10578051)
GO_REF:0000107		 RGD
Ensembl		 PMID:10578051 GO_REF:0000107 NCBI chr 5:162,686,562...162,779,309 JBrowse link
pentose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase involved_in
acts_upstream_of_or_within		 ISO (PMID:5643703)
MGI:2182739 (PMID:14757696), (PMID:15998684), (PMID:1953691), (PMID:7439685), (PMID:8491670), (PMID:9330624), (PMID:9539108), (PMID:9627357)		 RGD PMID:1953691 PMID:5643703 PMID:7439685 PMID:8491670 PMID:9330624 More... NCBI chr  X:157,352,364...157,372,144 JBrowse link
G Pgd phosphogluconate dehydrogenase acts_upstream_of_or_within ISO (PMID:8491670) RGD PMID:8491670 NCBI chr 5:159,582,746...159,598,945 JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in ISO
IBA		 (PMID:11356846), (PMID:20068046)
GO_REF:0000033		 RGD
GO_Central		 PMID:11356846 PMID:20068046 GO_REF:0000033 NCBI chr 1:152,504,180...152,606,596 JBrowse link
polyprenol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:146,198,359...146,224,479 JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:16527843) RGD PMID:16527843 NCBI chr17:26,523,704...26,785,558 JBrowse link
G Dab2 DAB adaptor protein 2 IDA RGD PMID:17303656 RGD:7243836 NCBI chr 2:57,241,947...57,294,893 JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA		 (PMID:16981135)
GO_REF:0000107		 RGD
Ensembl		 PMID:16981135 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:18565334), (PMID:19721697)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18565334 PMID:19721697 GO_REF:0000024 GO_REF:0000107 NCBI chr10:84,224,599...84,231,812 JBrowse link
G Star steroidogenic acute regulatory protein involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr16:72,969,824...72,974,447 JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr18:24,814,683...24,830,024 JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17916878) RGD PMID:17916878 NCBI chr20:9,128,056...9,184,312 JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17916878)		 Ensembl
RGD		 PMID:17916878 GO_REF:0000107 NCBI chr 8:53,508,005...53,525,314 JBrowse link
G Cyp7a1 cytochrome P450 family 7 subfamily A member 1 involved_in IDA PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chr 5:24,174,505...24,184,202 JBrowse link
G Fdps farnesyl diphosphate synthase IMP RGD PMID:18637708 RGD:2316295 NCBI chr 2:176,795,192...176,804,816 JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19229075)		 UniProt
RGD		 PMID:19229075 GO_REF:0000024 NCBI chr18:30,937,670...31,023,786 JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:38503280)		 Ensembl
RGD		 PMID:38503280 GO_REF:0000107 NCBI chr 4:17,706,061...17,790,176 JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:38503280)		 Ensembl
RGD		 PMID:38503280 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 involved_in ISO (PMID:11163209) RGD PMID:11163209 NCBI chr  X:37,410,914...37,461,130 JBrowse link
G Mir182 microRNA 182 involved_in ISO RNAcentral:URS000016FF9C_9606 (PMID:23823476) RGD PMID:23823476 NCBI chr 4:58,784,818...58,784,879 JBrowse link
G Mir96 microRNA 96 involved_in
acts_upstream_of		 ISO RNAcentral:URS00001CC379_9606 (PMID:23823476)
(PMID:30460077)		 RGD PMID:23823476 PMID:30460077 NCBI chr 4:58,788,411...58,788,516 JBrowse link
G Npy1r neuropeptide Y receptor Y1 IMP RGD PMID:32976883 RGD:405096663 NCBI chr16:27,804,416...27,814,070 JBrowse link
G Paqr3 progestin and adipoQ receptor family member 3 involved_in ISO (PMID:26311497) RGD PMID:26311497 NCBI chr14:12,462,568...12,484,999 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:38503280)		 Ensembl
RGD		 PMID:38503280 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189 JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) RGD PMID:33942715 NCBI chr 1:50,387,716...50,501,568 JBrowse link
G Scap SREBF chaperone involved_in ISO (PMID:32322062) RGD PMID:32322062 NCBI chr 8:119,184,366...119,239,086 JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:2554812 RGD:9850260 NCBI chr 5:128,035,714...128,110,015 JBrowse link
G Sec14l2 SEC14-like lipid binding 2 IDA RGD PMID:11226224 RGD:727312 NCBI chr14:78,973,805...78,998,480 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:12177166)
(PMID:8833906), (PMID:9062341)
MGI:2177958|MGI:2177959 (PMID:16046411), (PMID:9329978)
GO_REF:0000024
(PMID:32322062)		 RGD
UniProt		 PMID:8833906 PMID:9062341 PMID:9329978 PMID:12177166 PMID:16046411 More... GO_REF:0000024 NCBI chr10:45,507,152...45,529,164 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:33942715), (PMID:34021134)
(PMID:12177166), (PMID:38503280)
GO_REF:0000024
(PMID:32322062)		 Ensembl
RGD
UniProt		 PMID:12177166 PMID:32322062 PMID:33942715 PMID:34021134 PMID:38503280 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:115,542,774...115,600,945 JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in ISO
IEA		 (PMID:16981135)
GO_REF:0000107		 RGD
Ensembl		 PMID:16981135 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565 JBrowse link
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:11606482) RGD PMID:11606482 NCBI chr19:69,426,540...69,447,017 JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IEA		 (PMID:2307668)
GO_REF:0000107		 RGD
Ensembl		 PMID:2307668 GO_REF:0000107 NCBI chr 8:55,435,779...55,438,160 JBrowse link
G Apoa5 apolipoprotein A5 involved_in ISO
IEA		 (PMID:18635818)
GO_REF:0000107		 RGD
Ensembl		 PMID:18635818 GO_REF:0000107 NCBI chr 8:46,561,180...46,563,818 JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:10727238) RGD PMID:10727238 NCBI chr 1:79,329,429...79,334,397 JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISO
IEA		 (PMID:23749231)
GO_REF:0000107		 RGD
Ensembl		 PMID:23749231 GO_REF:0000107 NCBI chr 8:78,790,846...78,857,307 JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:16800817 RGD:1624995 NCBI chr 3:152,186,787...152,248,320 JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:14677856) RGD PMID:14677856 NCBI chr 1:207,272,738...207,421,998 JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:23932781) RGD PMID:23932781 NCBI chr 9:6,799,101...6,903,616 JBrowse link
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 involved_in ISO (PMID:23749231) RGD PMID:23749231 NCBI chr13:105,825,630...105,896,366 JBrowse link
G Mid1ip1 MID1 interacting protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20457939)		 UniProt
RGD		 PMID:20457939 GO_REF:0000024 NCBI chr  X:12,060,993...12,063,318 JBrowse link
G Mir182 microRNA 182 involved_in ISO RNAcentral:URS000016FF9C_9606 (PMID:23823476) RGD PMID:23823476 NCBI chr 4:58,784,818...58,784,879 JBrowse link
G Mir96 microRNA 96 involved_in
acts_upstream_of		 ISO RNAcentral:URS00001CC379_9606 (PMID:23823476)
(PMID:30460077)		 RGD PMID:23823476 PMID:30460077 NCBI chr 4:58,788,411...58,788,516 JBrowse link
G Mlxipl MLX interacting protein-like involved_in IEA
ISO		 GO_REF:0000107
(PMID:15118080)		 Ensembl
RGD		 PMID:15118080 GO_REF:0000107 NCBI chr12:27,178,158...27,213,675 JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO
IEA		 (PMID:17186944)
GO_REF:0000107		 RGD
Ensembl		 PMID:17186944 GO_REF:0000107 NCBI chr 1:95,041,967...95,047,358 JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA		 (PMID:17186944)
GO_REF:0000107		 RGD
Ensembl		 PMID:17186944 GO_REF:0000107 NCBI chr 3:97,614,616...97,632,053 JBrowse link
G Rgn regucalcin IDA RGD PMID:16817230 RGD:9590221 NCBI chr  X:1,619,030...1,634,456 JBrowse link
G Sirt2 sirtuin 2 involved_in