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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule biosynthetic process
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Accession:GO:0044283 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule biosynthesis


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small molecule biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101717854 24-hydroxycholesterol 7-alpha-hydroxylase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624754:13,980,180...14,033,591
Ensembl chrNW_004624754:13,980,354...14,034,098
JBrowse link
G LOC101724157 lanosterol 14-alpha demethylase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624809:1,080,427...1,110,802
Ensembl chrNW_004624809:1,080,656...1,100,254
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624939:41,154...47,608
Ensembl chrNW_004624939:41,567...51,634
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:23704330)
(PMID:1881876)
BHF-UCL PMID:1881876 PMID:23704330 NCBI chrNW_004624734:36,560,486...36,620,043
Ensembl chrNW_004624734:36,560,486...36,620,026
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in ISO (PMID:12937168) BHF-UCL PMID:12937168 NCBI chrNW_004624785:7,129,969...7,328,331
Ensembl chrNW_004624785:7,129,859...7,328,153
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:16,198,423...16,229,952
Ensembl chrNW_004624749:16,213,785...16,226,700
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chrNW_004624811:505,297...563,795
Ensembl chrNW_004624811:505,101...563,855
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chrNW_004624781:13,756,469...13,845,253
Ensembl chrNW_004624781:13,756,390...13,845,479
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chrNW_004624886:2,702,328...2,721,954
Ensembl chrNW_004624886:2,702,960...2,722,357
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624787:6,751,787...6,776,181
Ensembl chrNW_004624787:6,758,478...6,776,238
JBrowse link
G LOC101707509 cytochrome P450 1A1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chrNW_004627988:7...1,323 JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004624939:384,003...431,485
Ensembl chrNW_004624939:394,884...435,098
JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004624842:4,470,551...4,523,174
Ensembl chrNW_004624842:4,471,360...4,522,849
JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5'-nucleotidase ecto acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16547283) RGD
MGI
Ensembl
PMID:16547283 PMID:30269308 GO_REF:0000107 RGD:152995394 NCBI chrNW_004624799:8,766,608...8,845,296
Ensembl chrNW_004624799:8,765,711...8,845,778
JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004624913:1,926,405...1,952,426
Ensembl chrNW_004624913:1,891,156...1,949,633
JBrowse link
G LOC101700701 cytochrome P450 11B1, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1686470), (PMID:8645611) TreeGrafter
MGI
PMID:1686470 PMID:8645611 GO_REF:0000118 NCBI chrNW_004624735:13,701,382...13,708,750 JBrowse link
G LOC101701311 cytochrome P450 11B1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:13,726,649...13,734,536 JBrowse link
androst-4-ene-3,17-dione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inhba inhibin subunit beta A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:32954300) Ensembl
MGI
PMID:32954300 GO_REF:0000107 NCBI chrNW_004624740:19,458,835...19,482,570
Ensembl chrNW_004624740:19,464,289...19,482,888
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624740:8,414,664...8,423,797
Ensembl chrNW_004624740:8,414,733...8,423,777
JBrowse link
G Otc ornithine transcarbamylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:17,038,223...17,104,853
Ensembl chrNW_004624762:17,038,223...17,104,965
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:2573597) MGI
UniProt
InterPro
TreeGrafter
RGD
PMID:2573597 PMID:2887559 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 RGD:2316002 NCBI chrNW_004624813:4,642,420...4,661,362
Ensembl chrNW_004624813:4,641,372...4,661,778
JBrowse link
G LOC101726470 asparagine synthetase domain-containing protein 1-like involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624805:363,178...383,865 JBrowse link
G LOC106008472 asparagine synthetase domain-containing protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624899:561,534...564,339 JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:4193185) MGI
TreeGrafter
PMID:4193185 GO_REF:0000118 NCBI chrNW_004624737:11,114,818...11,153,209
Ensembl chrNW_004624737:11,115,066...11,153,211
JBrowse link
G Got1l1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624780:5,679,880...5,686,194 JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chrNW_004624746:27,557,994...27,586,257
Ensembl chrNW_004624746:27,558,005...27,586,257
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:9,911,323...9,940,770
Ensembl chrNW_004624747:9,911,448...9,940,537
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:3,146,000...3,236,473
Ensembl chrNW_004624742:3,142,570...3,236,728
JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO (PMID:27884763) UniProt PMID:27884763 NCBI chrNW_004624822:5,535,086...5,561,867
Ensembl chrNW_004624822:5,536,421...5,561,781
JBrowse link
G Akr1d1 aldo-keto reductase family 1 member D1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:7508385) MGI
Ensembl
InterPro
PMID:7508385 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624765:18,406,859...18,474,905
Ensembl chrNW_004624765:18,406,758...18,475,918
JBrowse link
G Amacr alpha-methylacyl-CoA racemase ISO RGD PMID:11964182 RGD:704372 NCBI chrNW_004624759:20,495,697...20,506,343
Ensembl chrNW_004624759:20,495,980...20,510,582
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO (PMID:22912762) MGI PMID:22912762 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:11279518) MGI PMID:11279518 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724
JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:12917011) UniProt PMID:12917011 NCBI chrNW_004624909:681,731...684,130
Ensembl chrNW_004624909:681,731...684,237
JBrowse link
G LOC101700018 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:6,199,807...6,258,273
Ensembl chrNW_004624823:6,200,047...6,258,001
JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869
JBrowse link
G LOC101717854 24-hydroxycholesterol 7-alpha-hydroxylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:13,980,180...14,033,591
Ensembl chrNW_004624754:13,980,354...14,034,098
JBrowse link
G LOC101721563 25-hydroxycholesterol 7-alpha-hydroxylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:26,791,829...26,999,584
Ensembl chrNW_004624744:26,792,890...26,991,425
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chrNW_004624744:14,227,430...14,245,082
Ensembl chrNW_004624744:14,240,570...14,245,183
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chrNW_004624731:9,862,948...9,896,064
Ensembl chrNW_004624731:9,862,731...9,896,661
JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chrNW_004624832:84,456...92,706
Ensembl chrNW_004624832:84,552...92,556
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:15382124 RGD:1600081 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:14,074,701...14,166,075
Ensembl chrNW_004624752:14,106,884...14,164,064
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624832:5,132,667...5,147,099
Ensembl chrNW_004624832:5,134,590...5,147,290
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101700018 sterol 26-hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:6,199,807...6,258,273
Ensembl chrNW_004624823:6,200,047...6,258,001
JBrowse link
G LOC101700851 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:15972816)
(PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
UniProt
BHF-UCL
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... NCBI chrNW_004624802:10,176,865...10,181,725
Ensembl chrNW_004624802:10,176,919...10,181,657
JBrowse link
G LOC101724787 vitamin D 25-hydroxylase involved_in ISO (PMID:15465040), (PMID:18511070) UniProt PMID:15465040 PMID:18511070 NCBI chrNW_004624766:6,667,662...6,678,045
Ensembl chrNW_004624766:6,667,234...6,677,992
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20097752), (PMID:24891507) MGI
InterPro
TreeGrafter
PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624767:19,097,963...19,108,078
Ensembl chrNW_004624767:19,097,944...19,107,665
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8647961) Ensembl
MGI
PMID:8647961 GO_REF:0000107 NCBI chrNW_004624784:12,249,283...12,251,215
Ensembl chrNW_004624784:12,249,283...12,251,136
JBrowse link
G Cftr CF transmembrane conductance regulator acts_upstream_of_or_within ISO (PMID:17085523) MGI PMID:17085523 NCBI chrNW_004624827:1,704,733...1,893,579 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in
ISO (PMID:11519011)
(PMID:14684813), (PMID:16321981), (PMID:16513830)
MGI
UniProt
PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 NCBI chrNW_004624862:4,995,836...5,022,395
Ensembl chrNW_004624862:4,995,720...5,020,850
JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in IEA
ISO
UniProt
TreeGrafter
RGD
PMID:9831636 PMID:10329655 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2316918 RGD:632010 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834
JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in IEA
ISO
TreeGrafter
RGD
PMID:11171067 GO_REF:0000118 RGD:628445 NCBI chrNW_004624893:340,843...346,560
Ensembl chrNW_004624893:341,129...347,717
JBrowse link
G Fdft1 farnesyl-diphosphate farnesyltransferase 1 involved_in IEA
ISO
TreeGrafter
RGD
PMID:16440058 GO_REF:0000118 RGD:1626611 NCBI chrNW_004624758:25,340,142...25,363,669
Ensembl chrNW_004624758:25,340,074...25,366,299
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) BHF-UCL PMID:12027950 NCBI chrNW_004624946:989,376...1,001,787
Ensembl chrNW_004624946:986,107...1,001,955
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15845870), (PMID:7798939), (PMID:8647961) UniProt
MGI
PMID:7798939 PMID:8647961 PMID:15845870 GO_REF:0000043 NCBI chrNW_004624951:681,559...711,476
Ensembl chrNW_004624951:682,178...711,474
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:11,826,793...11,847,111
Ensembl chrNW_004624759:11,826,876...11,847,111
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624772:15,432,612...15,464,343
Ensembl chrNW_004624772:15,432,198...15,467,797
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12829805) MGI
TreeGrafter
PMID:12829805 GO_REF:0000118 NCBI chrNW_004624826:1,260,133...1,287,565
Ensembl chrNW_004624826:1,260,223...1,283,741
JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624775:9,806,482...9,879,265 JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16955138) MGI
TreeGrafter
PMID:16955138 GO_REF:0000118 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16955138) MGI
TreeGrafter
PMID:16955138 GO_REF:0000118 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181
JBrowse link
G Lbr lamin B receptor involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624835:6,469,677...6,489,790 JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:25147230), (PMID:29599133) MGI PMID:25147230 PMID:29599133 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514
JBrowse link
G LOC101701184 insulin-induced gene 1 protein-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:10,635,098...10,635,822 JBrowse link
G LOC101702441 isopentenyl-diphosphate delta-isomerase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624775:9,900,047...9,907,786 JBrowse link
G LOC101710989 isopentenyl-diphosphate Delta-isomerase 1-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624788:10,772,413...10,773,165 JBrowse link
G LOC101718541 NADH-cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624752:6,182,156...6,198,395
Ensembl chrNW_004624752:6,182,129...6,198,400
JBrowse link
G Lss lanosterol synthase involved_in IEA
ISO
TreeGrafter
RGD
PMID:1429550 PMID:16440058 GO_REF:0000118 RGD:1626611 RGD:2316919 NCBI chrNW_004624745:31,301,648...31,325,283
Ensembl chrNW_004624745:31,306,807...31,325,199
JBrowse link
G Mvd mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624746:905,919...911,591
Ensembl chrNW_004624746:905,757...911,591
JBrowse link
G Mvk mevalonate kinase involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624747:10,837,743...10,858,758
Ensembl chrNW_004624747:10,834,306...10,857,595
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chrNW_004624740:7,590,041...7,609,574
Ensembl chrNW_004624740:7,590,046...7,609,420
JBrowse link
G Pmvk phosphomevalonate kinase involved_in IEA TreeGrafter
Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624885:2,544,136...2,552,591
Ensembl chrNW_004624885:2,543,862...2,553,237
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of ISO (PMID:9329978) MGI PMID:9329978 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465
JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in IEA UniProt
Ensembl
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:21,287,398...21,291,619
Ensembl chrNW_004624767:21,285,395...21,292,922
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101724157 lanosterol 14-alpha demethylase ISO RGD PMID:7581240 RGD:2316902 NCBI chrNW_004624809:1,080,427...1,110,802
Ensembl chrNW_004624809:1,080,656...1,100,254
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) UniProt PMID:11519011 NCBI chrNW_004624862:4,995,836...5,022,395
Ensembl chrNW_004624862:4,995,720...5,020,850
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr7 7-dehydrocholesterol reductase involved_in ISO (PMID:38297129), (PMID:38297130) UniProt PMID:38297129 PMID:38297130 NCBI chrNW_004624767:16,118,157...16,132,225
Ensembl chrNW_004624767:16,118,052...16,132,834
JBrowse link
G Sc5d sterol-C5-desaturase involved_in ISO (PMID:10786622)
PMID:4019441
RGD
UniProt
PMID:4019441 PMID:7961720 PMID:10786622 RGD:2316911 RGD:405866208 NCBI chrNW_004624880:3,874,337...3,896,721 JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chrNW_004624737:6,921,619...6,970,113
Ensembl chrNW_004624737:6,921,222...6,970,488
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA
RGD
TreeGrafter
PMID:7053379 GO_REF:0000118 RGD:10755426 NCBI chrNW_004624738:9,318,213...9,340,765
Ensembl chrNW_004624738:9,318,232...9,340,925
JBrowse link
G Otc ornithine transcarbamylase involved_in ISO
IEA
RGD
Ensembl
TreeGrafter
PMID:9472964 GO_REF:0000107 GO_REF:0000118 RGD:4144071 NCBI chrNW_004624762:17,038,223...17,104,853
Ensembl chrNW_004624762:17,038,223...17,104,965
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004624913:1,926,405...1,952,426
Ensembl chrNW_004624913:1,891,156...1,949,633
JBrowse link
G LOC101700701 cytochrome P450 11B1, mitochondrial NOT|involved_in ISO (PMID:9703385)
(PMID:19342457)
BHF-UCL
UniProt
PMID:9703385 PMID:19342457 NCBI chrNW_004624735:13,701,382...13,708,750 JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15028668) MGI
TreeGrafter
Ensembl
UniProt
RGD
PMID:15028668 PMID:15533043 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:1359081 NCBI chrNW_004624828:7,294,380...7,297,787
Ensembl chrNW_004624828:7,294,327...7,297,303
JBrowse link
G Gatm glycine amidinotransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9218780) MGI
UniProt
Ensembl
TreeGrafter
PMID:9218780 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624731:13,941,084...13,954,910
Ensembl chrNW_004624731:13,941,049...13,955,461
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chrNW_004624734:8,545,707...8,549,846
Ensembl chrNW_004624734:8,548,356...8,549,414
JBrowse link
G LOC101701770 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:28973536) MGI PMID:28973536 NCBI chrNW_004624786:13,038,384...13,053,250
Ensembl chrNW_004624786:13,036,426...13,053,210
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:12,917,244...12,937,858
Ensembl chrNW_004624760:12,915,206...12,937,824
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:1419907) TreeGrafter
MGI
Ensembl
PMID:1419907 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728
JBrowse link
G Sphk1 sphingosine kinase 1 ISO RGD PMID:18723875 RGD:2311353 NCBI chrNW_004624801:6,253,219...6,257,128 JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15030387) UniProt
MGI
PMID:15030387 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624745:27,676,430...27,687,573
Ensembl chrNW_004624745:27,673,748...27,688,462
JBrowse link
G Cth cystathionine gamma-lyase involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624742:25,619,261...25,642,477
Ensembl chrNW_004624742:25,619,277...25,642,875
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:12468440) UniProt PMID:12468440 NCBI chrNW_004624747:10,030,034...10,048,554 JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624745:27,676,430...27,687,573
Ensembl chrNW_004624745:27,673,748...27,688,462
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004624745:27,676,430...27,687,573
Ensembl chrNW_004624745:27,673,748...27,688,462
JBrowse link
G Cth cystathionine gamma-lyase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:25,619,261...25,642,477
Ensembl chrNW_004624742:25,619,277...25,642,875
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237) MGI
TreeGrafter
PMID:10557334 PMID:11054547 PMID:12021263 PMID:15710237 GO_REF:0000118 NCBI chrNW_004624786:4,969,742...4,988,874
Ensembl chrNW_004624786:4,977,574...4,988,945
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) UniProt PMID:10781601 NCBI chrNW_004624740:30,499,718...30,519,745
Ensembl chrNW_004624740:30,499,724...30,519,740
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) MGI PMID:11470797 NCBI chrNW_004624804:7,769,254...7,771,368
Ensembl chrNW_004624804:7,769,478...7,770,602
JBrowse link
G Dse dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624856:1,990,967...2,100,162
Ensembl chrNW_004624856:2,012,459...2,054,703
JBrowse link
G Ust uronyl 2-sulfotransferase involved_in ISO (PMID:10187838) UniProt PMID:10187838 NCBI chrNW_004624785:9,061,753...9,388,794
Ensembl chrNW_004624785:9,064,270...9,388,407
JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chrNW_004624835:6,161,930...6,181,016
Ensembl chrNW_004624835:6,162,111...6,168,714
JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:10,443,712...10,476,240
Ensembl chrNW_004624764:10,443,644...10,476,240
JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO (PMID:38821050) UniProt PMID:38821050 NCBI chrNW_004624834:929,478...1,053,851
Ensembl chrNW_004624834:927,152...1,053,855
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25066056) MGI
TreeGrafter
InterPro
PMID:25066056 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624798:12,132,570...12,154,252
Ensembl chrNW_004624798:12,130,569...12,154,314
JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624761:14,087,772...14,104,348
Ensembl chrNW_004624761:14,089,900...14,104,408
JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:3,146,000...3,236,473
Ensembl chrNW_004624742:3,142,570...3,236,728
JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in ISO
IEA
RGD
TreeGrafter
InterPro
UniProt
PMID:11735100 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 RGD:2317316 NCBI chrNW_004624871:4,103,014...4,364,690
Ensembl chrNW_004624871:4,105,067...4,412,325
JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17210641) TreeGrafter
UniProt
InterPro
MGI
Ensembl
PMID:17210641 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624747:12,287,817...12,426,340
Ensembl chrNW_004624747:12,307,541...12,424,897
JBrowse link
G Acly ATP citrate lyase involved_in ISO
IEA
RGD
TreeGrafter
PMID:11735100 GO_REF:0000118 RGD:2317316 NCBI chrNW_004624795:1,872,413...1,910,495
Ensembl chrNW_004624795:1,872,454...1,911,004
JBrowse link
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21846720) UniProt PMID:21846720 NCBI chrNW_004624746:627,089...655,922
Ensembl chrNW_004624746:628,010...655,950
JBrowse link
G Acsl3 acyl-CoA synthetase long chain family member 3 ISO RGD PMID:8663269 RGD:70280 NCBI chrNW_004624823:2,323,939...2,387,213
Ensembl chrNW_004624823:2,324,345...2,381,420
JBrowse link
G Acsm1 acyl-CoA synthetase medium chain family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11470804) TreeGrafter
MGI
PMID:11470804 GO_REF:0000118 NCBI chrNW_004624782:3,804,627...3,846,949
Ensembl chrNW_004624782:3,809,421...3,849,777
JBrowse link
G Acsm3 acyl-CoA synthetase medium chain family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11470804) Ensembl
TreeGrafter
MGI
PMID:11470804 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624782:6,930,461...6,958,867
Ensembl chrNW_004624782:6,930,505...6,959,069
JBrowse link
G Acsm4 acyl-CoA synthetase medium chain family member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:6,862,210...6,885,556
Ensembl chrNW_004624782:6,862,648...6,885,450
JBrowse link
G Acsm5 acyl-CoA synthetase medium chain family member 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:3,708,941...3,729,359
Ensembl chrNW_004624782:3,709,020...3,731,601
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964
JBrowse link
G Cbr4 carbonyl reductase 4 involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624769:564,148...603,402
Ensembl chrNW_004624769:581,800...604,075
JBrowse link
G Degs1 delta 4-desaturase, sphingolipid 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624835:5,880,855...5,889,295
Ensembl chrNW_004624835:5,880,301...5,889,294
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624892:2,679,872...2,684,499
Ensembl chrNW_004624892:2,675,421...2,684,622
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624756:14,934,048...14,995,801
Ensembl chrNW_004624756:14,978,195...14,992,938
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624831:1,646,319...1,649,435
Ensembl chrNW_004624831:1,646,240...1,649,740
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624819:6,572,263...6,601,991
Ensembl chrNW_004624819:6,572,161...6,602,072
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624850:523,059...598,135
Ensembl chrNW_004624850:522,018...597,469
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624815:9,154,070...9,247,251
Ensembl chrNW_004624815:9,190,454...9,247,746
JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624746:12,125,709...12,186,254
Ensembl chrNW_004624746:12,125,506...12,186,671
JBrowse link
G Fads1 fatty acid desaturase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624926:594,421...607,654
Ensembl chrNW_004624926:598,922...606,611
JBrowse link
G Fads2 fatty acid desaturase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624926:529,456...548,800
Ensembl chrNW_004624926:528,791...548,854
JBrowse link
G Fads3 fatty acid desaturase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624926:516,138...527,944
Ensembl chrNW_004624926:515,613...528,715
JBrowse link
G Fads6 fatty acid desaturase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624801:4,725,730...4,750,937
Ensembl chrNW_004624801:4,725,929...4,741,749
JBrowse link
G Fasn fatty acid synthase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22331133) TreeGrafter
MGI
UniProt
InterPro
RGD
PMID:15715522 PMID:22331133 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2317317 NCBI chrNW_004624801:10,910,022...10,926,505
Ensembl chrNW_004624801:10,909,647...10,927,547
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624796:10,295,957...10,315,222
Ensembl chrNW_004624796:10,295,993...10,313,108
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624912:1,814,906...1,916,584
Ensembl chrNW_004624912:1,814,906...1,917,009
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624781:7,007,155...7,043,165
Ensembl chrNW_004624781:7,007,155...7,043,244
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624736:25,005,040...25,028,163
Ensembl chrNW_004624736:25,005,329...25,025,611
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:10852923) MGI PMID:10852923 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724
JBrowse link
G Hsd17b8 hydroxysteroid 17-beta dehydrogenase 8 involved_in IEA UniProt
TreeGrafter
GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624754:23,600,706...23,602,786
Ensembl chrNW_004624754:23,600,706...23,602,751
JBrowse link
G Lipc lipase C, hepatic type involved_in ISO (PMID:182536) BHF-UCL PMID:182536 NCBI chrNW_004624781:13,342,469...13,468,120
Ensembl chrNW_004624781:13,342,357...13,455,055
JBrowse link
G LOC101699817 fatty acid desaturase 2-like protein FADS2P1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624864:3,634,267...3,666,107 JBrowse link
G LOC101712192 acyl-coenzyme A synthetase ACSM2A, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:3,736,644...3,767,028
Ensembl chrNW_004624782:3,736,246...3,769,174
JBrowse link
G LOC101715076 acyl-CoA desaturase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004624831:72,047...86,753 JBrowse link
G LOC101720934 acyl-CoA desaturase 1-like involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004624737:12,197,277...12,212,105 JBrowse link
G LOC110345709 hydroxyacyl-thioester dehydratase type 2, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:5,386,696...5,387,322 JBrowse link
G Lpl lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:15,652,553...15,680,107
Ensembl chrNW_004624758:15,651,992...15,680,762
JBrowse link
G Mcat malonyl-CoA-acyl carrier protein transacylase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624752:5,828,037...5,836,896
Ensembl chrNW_004624752:5,827,956...5,836,400
JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624764:12,954,673...12,989,711
Ensembl chrNW_004624764:12,954,115...12,989,755
JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624746:3,604,773...3,619,790
Ensembl chrNW_004624746:3,604,773...3,619,775
JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624782:8,739,614...8,748,968
Ensembl chrNW_004624782:8,740,125...8,749,473
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in IEA TreeGrafter
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004624788:3,701,751...3,721,743
Ensembl chrNW_004624788:3,714,360...3,718,678
JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624823:9,017,336...9,067,196
Ensembl chrNW_004624823:9,017,410...9,066,734
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624747:13,322,095...13,329,928
Ensembl chrNW_004624747:13,322,675...13,329,926
JBrowse link
G Pla2g2c phospholipase A2 group IIC involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:5,257,955...5,269,744 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:14,143,439...14,174,971
Ensembl chrNW_004624759:14,142,956...14,171,718
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624862:3,443,720...3,496,078
Ensembl chrNW_004624862:3,450,078...3,496,142
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:13,923,315...13,935,397
Ensembl chrNW_004624747:13,922,685...13,935,912
JBrowse link
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624772:16,110,805...16,127,221
Ensembl chrNW_004624772:16,110,294...16,127,119
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624816:3,182,708...3,185,602 JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624800:4,969,010...5,207,941
Ensembl chrNW_004624800:4,968,866...5,207,501
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624823:6,184,970...6,196,535
Ensembl chrNW_004624823:6,184,801...6,192,654
JBrowse link
G Scd5 stearoyl-CoA desaturase 5 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004624757:8,133,260...8,302,168
Ensembl chrNW_004624757:8,132,895...8,302,551
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624901:1,643,465...1,668,544
Ensembl chrNW_004624901:1,643,520...1,668,550
JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:26108493) UniProt PMID:26108493 NCBI chrNW_004624946:421,113...439,961
Ensembl chrNW_004624946:421,132...440,075
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 acts_upstream_of_or_within ISO (PMID:11567032) MGI PMID:11567032 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624796:10,295,957...10,315,222
Ensembl chrNW_004624796:10,295,993...10,313,108
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:1,814,906...1,916,584
Ensembl chrNW_004624912:1,814,906...1,917,009
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:7,007,155...7,043,165
Ensembl chrNW_004624781:7,007,155...7,043,244
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:25,005,040...25,028,163
Ensembl chrNW_004624736:25,005,329...25,025,611
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in ISO (PMID:12482854) UniProt PMID:12482854 NCBI chrNW_004624901:1,643,465...1,668,544
Ensembl chrNW_004624901:1,643,520...1,668,550
JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624892:2,679,872...2,684,499
Ensembl chrNW_004624892:2,675,421...2,684,622
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:14,934,048...14,995,801
Ensembl chrNW_004624756:14,978,195...14,992,938
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624831:1,646,319...1,649,435
Ensembl chrNW_004624831:1,646,240...1,649,740
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624819:6,572,263...6,601,991
Ensembl chrNW_004624819:6,572,161...6,602,072
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624850:523,059...598,135
Ensembl chrNW_004624850:522,018...597,469
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624815:9,154,070...9,247,251
Ensembl chrNW_004624815:9,190,454...9,247,746
JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:2,679,872...2,684,499
Ensembl chrNW_004624892:2,675,421...2,684,622
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624756:14,934,048...14,995,801
Ensembl chrNW_004624756:14,978,195...14,992,938
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624831:1,646,319...1,649,435
Ensembl chrNW_004624831:1,646,240...1,649,740
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter
Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624819:6,572,263...6,601,991
Ensembl chrNW_004624819:6,572,161...6,602,072
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA UniProt
TreeGrafter
GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624850:523,059...598,135
Ensembl chrNW_004624850:522,018...597,469
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624815:9,154,070...9,247,251
Ensembl chrNW_004624815:9,190,454...9,247,746
JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA InterPro
Ensembl
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624892:2,679,872...2,684,499
Ensembl chrNW_004624892:2,675,421...2,684,622
JBrowse link
G Elovl2 ELOVL fatty acid elongase 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624756:14,934,048...14,995,801
Ensembl chrNW_004624756:14,978,195...14,992,938
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624831:1,646,319...1,649,435
Ensembl chrNW_004624831:1,646,240...1,649,740
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA TreeGrafter
Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624819:6,572,263...6,601,991
Ensembl chrNW_004624819:6,572,161...6,602,072
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624850:523,059...598,135
Ensembl chrNW_004624850:522,018...597,469
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA UniProt
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA UniProt
TreeGrafter
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624815:9,154,070...9,247,251
Ensembl chrNW_004624815:9,190,454...9,247,746
JBrowse link
G Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 involved_in ISO (PMID:25003994) UniProt PMID:25003994 NCBI chrNW_004624767:4,163,452...4,315,827
Ensembl chrNW_004624767:4,160,053...4,316,370
JBrowse link
formaldehyde biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm3a lysine demethylase 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:16,784,538...16,829,784
Ensembl chrNW_004624749:16,784,538...16,829,365
JBrowse link
fructose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101720124 aldose reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:1,945,173...1,958,073
Ensembl chrNW_004624783:1,945,073...1,958,155
JBrowse link
G Sord sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:14,159,439...14,185,960
Ensembl chrNW_004624731:14,156,522...14,185,989
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:19540876 RGD:9588538 NCBI chrNW_004624824:6,112,644...6,202,936
Ensembl chrNW_004624824:6,141,213...6,202,936
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 involved_in ISO (PMID:26430123) UniProt PMID:26430123 NCBI chrNW_004624811:505,297...563,795
Ensembl chrNW_004624811:505,101...563,855
JBrowse link
G Gad1 glutamate decarboxylase 1 involved_in ISO
IEA
RGD
TreeGrafter
PMID:17712632 GO_REF:0000118 RGD:6480258 NCBI chrNW_004624787:8,308,759...8,345,929
Ensembl chrNW_004624787:8,308,759...8,347,686
JBrowse link
G Gad2 glutamate decarboxylase 2 involved_in IEA
ISO
TreeGrafter
RGD
PMID:22108820 GO_REF:0000118 RGD:401900601 NCBI chrNW_004624796:2,700,443...2,771,757
Ensembl chrNW_004624796:2,703,614...2,771,555
JBrowse link
G LOC101716322 glutamate decarboxylase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:6,001,195...6,104,931 JBrowse link
G Slc1a3 solute carrier family 1 member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15305132) MGI
Ensembl
PMID:15305132 GO_REF:0000107 NCBI chrNW_004624759:18,325,272...18,400,447
Ensembl chrNW_004624759:18,325,147...18,400,431
JBrowse link
G Slc38a1 solute carrier family 38 member 1 involved_in ISO (PMID:32668809) UniProt PMID:32668809 NCBI chrNW_004624816:5,988,625...6,025,987
Ensembl chrNW_004624816:5,989,601...6,025,987
JBrowse link
gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoc aldolase, fructose-bisphosphate C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:1,158,270...1,162,801
Ensembl chrNW_004624786:1,158,248...1,162,916
JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (PMID:11916968) MGI PMID:11916968 NCBI chrNW_004624771:18,009,111...18,060,796
Ensembl chrNW_004624771:18,050,039...18,060,802
JBrowse link
G Atf4 activating transcription factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11916968) Ensembl
MGI
PMID:11916968 GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032
JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of ISO (PMID:22275362) MGI PMID:22275362 NCBI chrNW_004624818:8,347,292...8,352,160
Ensembl chrNW_004624818:8,348,758...8,352,150
JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 involved_in ISO (PMID:16148943) UniProt PMID:16148943 NCBI chrNW_004624885:3,265,079...3,276,594
Ensembl chrNW_004624885:3,264,983...3,277,459
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:20852621) UniProt PMID:20852621 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:30679508) MGI PMID:30679508 NCBI chrNW_004624818:3,223,384...3,235,128
Ensembl chrNW_004624818:3,223,308...3,238,419
JBrowse link
G Eno2 enolase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chrNW_004624860:3,553,936...3,561,343
Ensembl chrNW_004624860:3,553,947...3,564,294
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in IEA
ISO
TreeGrafter
UniProt
RGD
PMID:4353083 PMID:11440903 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302851 RGD:2302970 NCBI chrNW_004624753:16,019,546...16,048,096
Ensembl chrNW_004624753:16,016,022...16,048,104
JBrowse link
G Fbp2 fructose-bisphosphatase 2 involved_in IEA
ISO
TreeGrafter
UniProt
RGD
PMID:4353083 PMID:11440903 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302851 RGD:2302970 NCBI chrNW_004624753:15,981,008...16,010,389
Ensembl chrNW_004624753:15,980,116...16,010,489
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 involved_in IEA
ISO
Ensembl
UniProt
TreeGrafter
RGD
PMID:4303362 PMID:4353083 PMID:11440903 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chrNW_004624795:1,331,592...1,339,575
Ensembl chrNW_004624795:1,331,601...1,339,580
JBrowse link
G G6pc2 glucose-6-phosphatase catalytic subunit 2 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624787:6,635,361...6,643,107
Ensembl chrNW_004624787:6,635,385...6,641,937
JBrowse link
G G6pc3 glucose-6-phosphatase catalytic subunit 3 involved_in ISO
IEA
RGD
TreeGrafter
UniProt
PMID:4303362 PMID:4353083 PMID:11440903 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chrNW_004624795:838,786...843,465
Ensembl chrNW_004624795:838,681...842,883
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:28258188) RGD
MGI
PMID:15720133 PMID:28258188 RGD:13792662 RGD:2302795 NCBI chrNW_004624860:3,257,805...3,261,736
Ensembl chrNW_004624860:3,257,853...3,261,735
JBrowse link
G Gcg glucagon acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624732:3,361,897...3,370,020
Ensembl chrNW_004624732:3,362,234...3,370,536
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:17545671) MGI PMID:17545671 NCBI chrNW_004624737:11,114,818...11,153,209
Ensembl chrNW_004624737:11,115,066...11,153,211
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12093800) MGI PMID:12093800 NCBI chrNW_004624816:2,203,731...2,211,006
Ensembl chrNW_004624816:2,203,731...2,210,509
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:12093800) MGI PMID:12093800 NCBI chrNW_004624732:9,298,156...9,447,883 JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624794:8,826,281...8,851,614
Ensembl chrNW_004624794:8,823,449...8,851,625
JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 ISO RGD PMID:25865565 RGD:11342811 NCBI chrNW_004624914:460,240...501,087
Ensembl chrNW_004624914:459,701...501,765
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624795:1,782,367...1,787,408
Ensembl chrNW_004624795:1,782,366...1,788,951
JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of
IEA
ISO
(PMID:24051374) Ensembl
MGI
PMID:24051374 GO_REF:0000107 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049
JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in ISO (PMID:12581790) MGI PMID:12581790 NCBI chrNW_004624740:14,837,699...14,850,126
Ensembl chrNW_004624740:14,837,023...14,850,988
JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA
RGD
UniProt
InterPro
TreeGrafter
PMID:4353083 PMID:6049928 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302851 RGD:2302971 NCBI chrNW_004624767:19,481,158...19,601,036
Ensembl chrNW_004624767:19,480,522...19,614,051
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11916968) TreeGrafter
UniProt
MGI
InterPro
RGD
PMID:4303362 PMID:4353083 PMID:6049928 PMID:11440903 PMID:11916968 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302850 RGD:2302851 RGD:2302970 RGD:2302971 NCBI chrNW_004624741:23,985,257...23,990,354
Ensembl chrNW_004624741:23,985,675...23,989,790
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA
ISO
TreeGrafter
InterPro
UniProt
RGD
PMID:4353083 PMID:6049928 PMID:11440903 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 RGD:2302851 RGD:2302970 RGD:2302971 NCBI chrNW_004624820:8,426,456...8,436,484
Ensembl chrNW_004624820:8,426,606...8,436,284
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:22504074) UniProt PMID:22504074 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:24958256) MGI PMID:24958256 NCBI chrNW_004624737:9,088,545...9,096,350
Ensembl chrNW_004624737:9,088,539...9,096,348
JBrowse link
G Pgam2 phosphoglycerate mutase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chrNW_004624740:7,947,738...7,949,900
Ensembl chrNW_004624740:7,947,742...7,950,956
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IEA
ISO
TreeGrafter
RGD
PMID:3091090 PMID:15720133 GO_REF:0000118 RGD:2302795 RGD:2302860 NCBI chrNW_004624836:2,657,320...2,676,124
Ensembl chrNW_004624836:2,653,474...2,676,766
JBrowse link
G Pgk2 phosphoglycerate kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624799:14,621,413...14,623,050
Ensembl chrNW_004624799:14,621,673...14,622,926
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of
involved_in
ISO
IEA
(PMID:15232616) MGI
Ensembl
PMID:15232616 GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (PMID:15716268)
(PMID:16753578), (PMID:23142079)
RGD
UniProt
PMID:15716268 PMID:16753578 PMID:21212096 PMID:23142079 RGD:9585757 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
G Ppp4r3a protein phosphatase 4 regulatory subunit 3A acts_upstream_of ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004624734:11,160,253...11,197,264
Ensembl chrNW_004624734:11,160,356...11,197,817
JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B acts_upstream_of ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004624833:5,936,196...6,009,565 JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (PMID:18466349)
(PMID:16034410)
BHF-UCL PMID:16034410 PMID:18466349 NCBI chrNW_004624737:4,795,054...4,800,830
Ensembl chrNW_004624737:4,791,628...4,800,989
JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of
IEA
ISO
(PMID:22837305) Ensembl
MGI
PMID:22837305 GO_REF:0000107 NCBI chrNW_004624734:7,191,049...7,204,386
Ensembl chrNW_004624734:7,191,010...7,206,020
JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in ISO (PMID:35507647) MGI PMID:35507647 NCBI chrNW_004624786:8,795,077...8,797,871
Ensembl chrNW_004624786:8,795,083...8,797,882
JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:14701727) MGI PMID:14701727 NCBI chrNW_004624813:2,851,620...3,019,593
Ensembl chrNW_004624813:2,852,585...2,998,651
JBrowse link
G Slc37a4 solute carrier family 37 member 4 involved_in ISO (PMID:28973635) MGI PMID:28973635 NCBI chrNW_004624784:14,415,385...14,421,953
Ensembl chrNW_004624784:14,415,395...14,421,944
JBrowse link
G Slc39a14 solute carrier family 39 member 14 acts_upstream_of ISO (PMID:21445361) UniProt PMID:21445361 NCBI chrNW_004624758:17,911,889...17,954,870
Ensembl chrNW_004624758:17,912,827...17,953,294
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624860:3,533,226...3,536,786
Ensembl chrNW_004624860:3,533,320...3,539,755
JBrowse link
G Wdr5 WD repeat domain 5 acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624760:2,275,660...2,291,796
Ensembl chrNW_004624760:2,274,813...2,292,379
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624854:5,106,419...5,202,445
Ensembl chrNW_004624854:5,108,566...5,202,240
JBrowse link
G Gls2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:11,545,196...11,559,851
Ensembl chrNW_004624802:11,545,142...11,561,942
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chrNW_004624841:133,267...171,324 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004624787:9,187,450...9,319,684
Ensembl chrNW_004624787:9,184,514...9,320,060
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase involved_in ISO
IEA
RGD
InterPro
TreeGrafter
PMID:28323 PMID:4403443 GO_REF:0000002 GO_REF:0000118 RGD:2301547 RGD:2301548 NCBI chrNW_004624771:2,608,779...2,618,130 JBrowse link
G Lgsn lengsin, lens protein with glutamine synthetase domain involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624753:21,645,389...21,694,557
Ensembl chrNW_004624753:21,650,655...21,679,764
JBrowse link
G LOC101696542 glutamine synthetase involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624732:4,017,545...4,018,777 JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in
ISO (PMID:17545671) MGI
UniProt
PMID:17545671 RGD:8553472 NCBI chrNW_004624737:11,114,818...11,153,209
Ensembl chrNW_004624737:11,115,066...11,153,211
JBrowse link
G Lep leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO (PMID:26755581) UniProt PMID:26755581 RGD:10679995 NCBI chrNW_004624913:45,439...48,259
Ensembl chrNW_004624913:45,499...49,060
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11792850) TreeGrafter
MGI
PMID:11792850 GO_REF:0000118 NCBI chrNW_004624741:23,985,257...23,990,354
Ensembl chrNW_004624741:23,985,675...23,989,790
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:8,426,456...8,436,484
Ensembl chrNW_004624820:8,426,606...8,436,284
JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101703542 probable low-specificity L-threonine aldolase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:7,747,659...7,753,305 JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chrNW_004624849:3,108,875...3,146,669
Ensembl chrNW_004624849:3,114,876...3,146,248
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chrNW_004624802:10,713,276...10,718,391
Ensembl chrNW_004624802:10,713,276...10,719,253
JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 involved_in IEA
ISO
in the presence of tetrahydrofolate TreeGrafter
InterPro
RGD
PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chrNW_004624849:3,108,875...3,146,669
Ensembl chrNW_004624849:3,114,876...3,146,248
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in ISO
IEA
in the presence of tetrahydrofolate RGD
InterPro
TreeGrafter
PMID:3110140 GO_REF:0000002 GO_REF:0000118 RGD:2300383 NCBI chrNW_004624802:10,713,276...10,718,391
Ensembl chrNW_004624802:10,713,276...10,719,253
JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO
IEA
RGD
TreeGrafter
PMID:12383475 GO_REF:0000118 RGD:1599457 NCBI chrNW_004624847:5,066,356...5,073,538
Ensembl chrNW_004624847:5,067,201...5,077,525
JBrowse link
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:19,858,255...19,909,516
Ensembl chrNW_004624759:19,858,148...19,938,229
JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042
JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chrNW_004624786:9,542,966...9,555,235
Ensembl chrNW_004624786:9,542,970...9,555,214
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chrNW_004624786:10,647,450...10,659,301
Ensembl chrNW_004624786:10,647,175...10,659,337
JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in ISO PMID:23382512
(PMID:17045234)
(PMID:22832496)
(PMID:12881489), (PMID:17045234)
UniProt PMID:12881489 PMID:17045234 PMID:22832496 PMID:23382512 RGD:8554649 NCBI chrNW_004624786:10,666,255...10,689,204
Ensembl chrNW_004624786:10,666,423...10,688,376
JBrowse link
hexose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst15 carbohydrate sulfotransferase 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:22,985,166...23,067,409
Ensembl chrNW_004624737:22,985,178...23,067,738
JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in ISO (PMID:10934207) CAFA PMID:10934207 NCBI chrNW_004624730:22,944,710...23,034,200
Ensembl chrNW_004624730:22,944,184...23,034,231
JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in ISO (PMID:16447251) UniProt PMID:16447251 NCBI chrNW_004624740:16,074,027...16,082,139
Ensembl chrNW_004624740:16,074,141...16,082,223
JBrowse link
hypochlorous acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpo myeloperoxidase acts_upstream_of_or_within ISO (PMID:10085024) MGI PMID:10085024 NCBI chrNW_004624871:121,026...131,433
Ensembl chrNW_004624871:121,026...131,323
JBrowse link
icosanoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101696405 cytochrome P450 4A4-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624906:2,783,788...2,795,480 JBrowse link
G LOC101699948 cytochrome P450 4A6-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624906:2,697,363...2,712,697 JBrowse link
G LOC101700306 cytochrome P450 4A10-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624906:2,729,241...2,735,501 JBrowse link
G Pla2g4a phospholipase A2 group IVA acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17293613) MGI
Ensembl
PMID:17293613 GO_REF:0000107 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286
JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:8663040)
(PMID:10720488)
(PMID:7731963), (PMID:9272950)
(PMID:1618849), (PMID:2015347), (PMID:7592575), (PMID:8663040), (PMID:8894685), (PMID:9272950)
(PMID:8894685)
MGI
TreeGrafter
PMID:1618849 PMID:2015347 PMID:7592575 PMID:7731963 PMID:8663040 More... GO_REF:0000118 NCBI chrNW_004624790:9,809,550...9,829,199
Ensembl chrNW_004624790:9,809,492...9,829,883
JBrowse link
G Ada2 adenosine deaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:10,023,330...10,052,600 JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004624760:7,684,098...7,693,051
Ensembl chrNW_004624760:7,684,109...7,693,405
JBrowse link
G Mapda N6-Methyl-AMP deaminase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:10,438,845...10,463,086
Ensembl chrNW_004624804:10,445,758...10,462,648
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624744:9,817,723...9,839,186
Ensembl chrNW_004624744:9,817,004...9,839,760
JBrowse link
G Impa2 inositol monophosphatase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624770:19,526,796...19,549,113
Ensembl chrNW_004624770:19,526,446...19,548,386
JBrowse link
G Isyna1 inositol-3-phosphate synthase 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004624908:1,658,512...1,661,507
Ensembl chrNW_004624908:1,658,512...1,661,640
JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k1 inositol hexakisphosphate kinase 1 involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624730:3,648,461...3,704,664
Ensembl chrNW_004624730:3,648,461...3,704,646
JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624730:2,697,098...2,734,198
Ensembl chrNW_004624730:2,697,098...2,734,636
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11502751) MGI
InterPro
TreeGrafter
PMID:11502751 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624754:23,191,793...23,212,581
Ensembl chrNW_004624754:23,195,787...23,207,754
JBrowse link
G Ipmk inositol polyphosphate multikinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15939867) InterPro
TreeGrafter
MGI
PMID:15939867 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624791:5,325,413...5,387,912 JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624868:3,722,713...3,781,639
Ensembl chrNW_004624868:3,722,800...3,779,747
JBrowse link
G Itpka inositol-trisphosphate 3-kinase A involved_in IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624804:8,655,762...8,664,599
Ensembl chrNW_004624804:8,655,777...8,664,600
JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624807:658,334...741,018
Ensembl chrNW_004624807:658,231...741,195
JBrowse link
G Itpkc inositol-trisphosphate 3-kinase C involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624925:645,528...663,768
Ensembl chrNW_004624925:645,385...662,580
JBrowse link
G Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:10,633,142...10,680,089
Ensembl chrNW_004624804:10,633,142...10,680,084
JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:21,236,965...21,322,791
Ensembl chrNW_004624743:21,236,980...21,322,064
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004624919:1,766,533...1,800,130
Ensembl chrNW_004624919:1,766,149...1,803,097
JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:9013981) MGI PMID:9013981 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004624789:3,589,863...3,605,655
Ensembl chrNW_004624789:3,592,214...3,605,537
JBrowse link
G Ptafr platelet activating factor receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9013981) Ensembl
MGI
PMID:9013981 GO_REF:0000107 NCBI chrNW_004624764:11,996,454...12,025,751
Ensembl chrNW_004624764:11,998,657...11,999,685
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004624859:106,405...252,870
Ensembl chrNW_004624859:107,258...252,756
JBrowse link
ketone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coq5 coenzyme Q5, methyltransferase involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624747:13,145,380...13,165,169
Ensembl chrNW_004624747:13,145,343...13,168,246
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:30530497) UniProt PMID:30530497 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Ubiad1 UbiA prenyltransferase domain containing 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624818:1,555,751...1,565,281
Ensembl chrNW_004624818:1,554,084...1,565,383
JBrowse link
ketone body biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in ISO
IEA
RGD
TreeGrafter
Ensembl
PMID:2573547 GO_REF:0000107 GO_REF:0000118 RGD:1599519 NCBI chrNW_004624764:8,349,288...8,363,178
Ensembl chrNW_004624764:8,348,724...8,363,220
JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624850:2,914,913...3,104,836
Ensembl chrNW_004624850:2,914,913...3,104,723
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO (PMID:23751782) RGD
UniProt
PMID:12399220 PMID:23751782 RGD:2326121 NCBI chrNW_004624772:15,432,612...15,464,343
Ensembl chrNW_004624772:15,432,198...15,467,797
JBrowse link
G Slc27a5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO (PMID:16618416) MGI PMID:16618416 NCBI chrNW_004624832:84,456...92,706
Ensembl chrNW_004624832:84,552...92,556
JBrowse link
kynurenic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19234212) Ensembl
MGI
PMID:19234212 GO_REF:0000107 NCBI chrNW_004624780:3,684,941...3,697,506
Ensembl chrNW_004624780:3,685,069...3,697,474
JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:15829251 RGD:13513901 NCBI chrNW_004624771:11,900,020...11,942,943
Ensembl chrNW_004624771:11,899,624...11,942,806
JBrowse link
L-arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in IEA Ensembl
UniProt
GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004624740:8,414,664...8,423,797
Ensembl chrNW_004624740:8,414,733...8,423,777
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IEA
ISO
TreeGrafter
UniProt
InterPro
Ensembl
RGD
PMID:12470967 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:631755 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732
JBrowse link
G Nags N-acetylglutamate synthase involved_in IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624795:875,463...879,283
Ensembl chrNW_004624795:875,750...879,256
JBrowse link
L-ascorbic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISO (PMID:20410296)
(PMID:15769935)
PMID:22820017
UniProt
MGI
PMID:15769935 PMID:20410296 PMID:22820017 RGD:13825440 NCBI chrNW_004624906:1,463,201...1,474,001
Ensembl chrNW_004624906:1,462,693...1,474,214
JBrowse link
G Gsto1 glutathione S-transferase omega 1 ISO RGD PMID:9786866 RGD:70644 NCBI chrNW_004624831:3,342,539...3,351,766
Ensembl chrNW_004624831:3,342,584...3,352,467
JBrowse link
G LOC101717756 L-gulonolactone oxidase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624758:22,402,567...22,423,927 JBrowse link
G LOC101720124 aldose reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:1,945,173...1,958,073
Ensembl chrNW_004624783:1,945,073...1,958,155
JBrowse link
G Rgn regucalcin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624887:3,881,624...3,900,144
Ensembl chrNW_004624887:3,883,213...3,899,277
JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624813:4,642,420...4,661,362
Ensembl chrNW_004624813:4,641,372...4,661,778
JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:16489927 RGD:13504861 NCBI chrNW_004624737:11,114,818...11,153,209
Ensembl chrNW_004624737:11,115,066...11,153,211
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:16489927 RGD:13504861 NCBI chrNW_004624746:27,557,994...27,586,257
Ensembl chrNW_004624746:27,558,005...27,586,257
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 ISO RGD PMID:11733007 RGD:1582175 NCBI chrNW_004624832:5,132,667...5,147,099
Ensembl chrNW_004624832:5,134,590...5,147,290
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004624737:6,921,619...6,970,113
Ensembl chrNW_004624737:6,921,222...6,970,488
JBrowse link
G Noxred1 NADP dependent oxidoreductase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:24,465,061...24,514,874
Ensembl chrNW_004624734:24,468,506...24,514,680
JBrowse link
G Oat ornithine aminotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004624737:22,657,158...22,679,213
Ensembl chrNW_004624737:22,664,129...22,678,535
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004624801:10,777,407...10,781,572
Ensembl chrNW_004624801:10,776,747...10,781,614
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 involved_in IEA TreeGrafter
UniProt
GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004624807:37,742...63,887
Ensembl chrNW_004624807:31,830...63,985
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004624735:13,136,287...13,142,051 JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phgdh phosphoglycerate dehydrogenase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624772:15,473,609...15,514,392
Ensembl chrNW_004624772:15,473,221...15,514,637
JBrowse link
G Psat1 phosphoserine aminotransferase 1 involved_in IEA InterPro
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624811:5,727,912...5,751,921
Ensembl chrNW_004624811:5,727,685...5,751,607
JBrowse link
G Psph phosphoserine phosphatase involved_in IEA TreeGrafter
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624740:8,212,051...8,233,358
Ensembl chrNW_004624740:8,213,574...8,226,224
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:10457370 RGD:2300380 NCBI chrNW_004624802:10,713,276...10,718,391
Ensembl chrNW_004624802:10,713,276...10,719,253
JBrowse link
lactate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatd1 glutamine amidotransferase class 1 domain containing 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624766:21,751,221...21,761,727
Ensembl chrNW_004624766:21,751,234...21,757,630
JBrowse link
G Ins insulin involved_in ISO (PMID:8069456) AgBase PMID:8069456 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22523093) ParkinsonsUK-UCL PMID:22523093 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:23977055) UniProt PMID:23977055 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405
JBrowse link
lactate biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:17708681) MGI PMID:17708681 NCBI chrNW_004624755:24,602,955...24,729,584
Ensembl chrNW_004624755:24,603,490...24,729,333
JBrowse link
G LOC101715932 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (PMID:18367675) MGI PMID:18367675 NCBI chrNW_004624766:9,882,494...9,943,079
Ensembl chrNW_004624766:9,886,618...9,921,535
JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:24282679)
(PMID:31642348)
(PMID:31664810)
UniProt PMID:24282679 PMID:31642348 PMID:31664810 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522
JBrowse link
leukotriene biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase acts_upstream_of_or_within
involved_in
ISO (PMID:19075240)
(PMID:7809134)
(PMID:21233389), (PMID:24893149)
MGI
UniProt
PMID:7809134 PMID:19075240 PMID:21233389 PMID:24893149 NCBI chrNW_004624966:168,244...220,430
Ensembl chrNW_004624966:168,250...220,522
JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9091580)
(PMID:19075240)
UniProt
TreeGrafter
MGI
Ensembl
RGD
PMID:2300173 PMID:9091580 PMID:19075240 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:2313889 RGD:69749 NCBI chrNW_004624776:7,475,269...7,646,805
Ensembl chrNW_004624776:7,475,200...7,506,283
JBrowse link
G Camp cathelicidin antimicrobial peptide ISO RGD PMID:24990383 RGD:442380204 NCBI chrNW_004624730:73,429,893...73,431,104 JBrowse link
G Fcer1a Fc fragment of IgE receptor Ia acts_upstream_of_or_within ISO (PMID:9000133) MGI PMID:9000133 NCBI chrNW_004624794:2,003,031...2,008,930
Ensembl chrNW_004624794:2,002,928...2,008,940
JBrowse link
G Lta4h leukotriene A4 hydrolase involved_in IEA TreeGrafter
UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624750:11,274,506...11,314,683
Ensembl chrNW_004624750:11,274,664...11,314,581
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in ISO
IEA
RGD
TreeGrafter
UniProt
PMID:14637132 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 RGD:2302289 NCBI chrNW_004624733:42,668,963...42,673,385
Ensembl chrNW_004624733:42,670,632...42,672,846
JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in IEA TreeGrafter
Ensembl
UniProt
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624777:19,902,013...19,924,272
Ensembl chrNW_004624777:19,901,862...19,927,011
JBrowse link
G Mgst3 microsomal glutathione S-transferase 3 involved_in ISO (PMID:9278457) BHF-UCL PMID:9278457 NCBI chrNW_004624826:3,969,838...3,987,159
Ensembl chrNW_004624826:3,969,929...3,987,159
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:16005851) BHF-UCL PMID:16005851 NCBI chrNW_004624747:13,322,095...13,329,928
Ensembl chrNW_004624747:13,322,675...13,329,926
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286
JBrowse link
G Pla2g5 phospholipase A2 group V involved_in ISO
IEA
RGD
Ensembl
PMID:11106649 GO_REF:0000107 RGD:2303037 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232
JBrowse link
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 involved_in ISO (PMID:10318872) UniProt PMID:10318872 NCBI chrNW_004624864:3,220,811...3,225,556
Ensembl chrNW_004624864:3,220,811...3,225,554
JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9000133) Ensembl
MGI
PMID:9000133 GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391
JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911)
(PMID:21447318)
UniProt
BHF-UCL
PMID:14754911 PMID:21447318 NCBI chrNW_004624747:10,030,034...10,048,554 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9774450)
(PMID:12163373)
MGI
Ensembl
PMID:9774450 PMID:12163373 GO_REF:0000107 NCBI chrNW_004624747:10,050,765...10,072,255
Ensembl chrNW_004624747:10,051,553...10,071,983
JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11389890) TreeGrafter
MGI
UniProt
InterPro
PMID:11389890 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624870:4,809,154...4,825,676 JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO (PMID:8250832) UniProt PMID:8250832 NCBI chrNW_004624786:9,542,966...9,555,235
Ensembl chrNW_004624786:9,542,970...9,555,214
JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO (PMID:8250832) UniProt PMID:8250832 NCBI chrNW_004624786:9,542,966...9,555,235
Ensembl chrNW_004624786:9,542,970...9,555,214
JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 ISO RGD PMID:11381125 RGD:68727 NCBI chrNW_004624894:2,618,000...2,661,174
Ensembl chrNW_004624894:2,617,711...2,661,174
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:12,906,908...13,059,033
Ensembl chrNW_004624791:12,907,485...13,059,005
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO (PMID:20937905) UniProt PMID:20937905 NCBI chrNW_004624838:4,469,321...4,593,919
Ensembl chrNW_004624838:4,468,192...4,593,556
JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) MGI PMID:10601301 NCBI chrNW_004624926:594,421...607,654
Ensembl chrNW_004624926:598,922...606,611
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624733:42,668,963...42,673,385
Ensembl chrNW_004624733:42,670,632...42,672,846
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chrNW_004624731:8,114,557...8,280,586
Ensembl chrNW_004624731:8,113,715...8,280,823
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chrNW_004624954:135,065...150,911
Ensembl chrNW_004624954:133,105...150,953
JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chrNW_004624785:15,738,231...15,845,051
Ensembl chrNW_004624785:15,739,187...15,845,024
JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:9,223,949...9,229,336
Ensembl chrNW_004624738:9,223,807...9,233,737
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:16,283,369...16,404,476
Ensembl chrNW_004624768:16,297,464...16,402,624
JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:10,073,462...10,126,062
Ensembl chrNW_004624770:10,073,444...10,113,235
JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004624818:5,048,410...5,142,135
Ensembl chrNW_004624818:5,065,995...5,142,558
JBrowse link
G Olah oleoyl-ACP hydrolase involved_in ISO PMID:8446599
(PMID:26663084)
UniProt PMID:8446599 PMID:26663084 RGD:13524614 NCBI chrNW_004624805:476,106...494,612
Ensembl chrNW_004624805:476,612...495,158
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) HGNC-UCL PMID:15668256 NCBI chrNW_004624788:3,701,751...3,721,743
Ensembl chrNW_004624788:3,714,360...3,718,678
JBrowse link
menaquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubiad1 UbiA prenyltransferase domain containing 1 involved_in IEA UniProt
TreeGrafter
GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624818:1,555,751...1,565,281
Ensembl chrNW_004624818:1,554,084...1,565,383
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine--homocysteine S-methyltransferase ISO RGD PMID:15845641 RGD:1359026 NCBI chrNW_004624869:3,618,895...3,639,621
Ensembl chrNW_004624869:3,617,948...3,642,860
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:11730351 PMID:15845641 RGD:1359026 RGD:1601423 NCBI chrNW_004624775:13,791,690...13,903,888
Ensembl chrNW_004624775:13,792,043...13,896,559
JBrowse link
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101715076 acyl-CoA desaturase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624831:72,047...86,753 JBrowse link
G LOC101720934 acyl-CoA desaturase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:12,197,277...12,212,105 JBrowse link
G Scd5 stearoyl-CoA desaturase 5 acts_upstream_of_or_within ISO (PMID:16443825) MGI PMID:16443825 NCBI chrNW_004624757:8,133,260...8,302,168
Ensembl chrNW_004624757:8,132,895...8,302,551
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in ISO (PMID:11929971)
(PMID:14707127), (PMID:31121216)
(PMID:17549255)
MGI
FlyBase
UniProt
PMID:11929971 PMID:14707127 PMID:17549255 PMID:31121216 NCBI chrNW_004624868:4,362,144...4,417,604
Ensembl chrNW_004624868:4,361,752...4,417,604
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624939:41,154...47,608
Ensembl chrNW_004624939:41,567...51,634
JBrowse link
G Nans N-acetylneuraminate synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:2,771,301...2,795,813
Ensembl chrNW_004624825:2,771,057...2,795,815
JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004624850:3,324,553...3,481,439
Ensembl chrNW_004624850:3,322,782...3,481,512
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004624766:4,042,307...4,085,613
Ensembl chrNW_004624766:4,041,816...4,085,209
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within
ISO (PMID:12815072)
(PMID:23747249)
UniProt
MGI
PMID:12815072 PMID:23747249 NCBI chrNW_004624767:17,434,501...17,439,351
Ensembl chrNW_004624767:17,432,358...17,438,173
JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO (PMID:23747249) MGI PMID:23747249 NCBI chrNW_004624796:8,383,901...9,074,860
Ensembl chrNW_004624796:8,384,081...9,074,878
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:16488887) BHF-UCL PMID:16488887 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338
JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) BHF-UCL PMID:15947108 NCBI chrNW_004624742:5,260,651...5,271,908
Ensembl chrNW_004624742:5,261,537...5,270,695
JBrowse link
G LOC101700851 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chrNW_004624802:10,176,865...10,181,725
Ensembl chrNW_004624802:10,176,919...10,181,657
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:15243130) BHF-UCL PMID:15243130 NCBI chrNW_004624830:5,334,273...5,430,887
Ensembl chrNW_004624830:5,333,616...5,408,723
JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:1917954) BHF-UCL
RGD
PMID:1917954 PMID:9225228 RGD:10059686 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Chlsn cholesin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,552,102...26,671,059
Ensembl chrNW_004624740:26,549,264...26,662,409
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004624737:11,977,397...12,018,437
Ensembl chrNW_004624737:11,977,397...12,018,438
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004624780:5,844,473...5,861,493
Ensembl chrNW_004624780:5,843,141...5,862,039
JBrowse link
G Insig1 insulin induced gene 1 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004624807:7,201,924...7,292,010
Ensembl chrNW_004624807:7,201,777...7,250,386
JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004624741:7,706,205...7,717,677
Ensembl chrNW_004624741:7,706,236...7,719,484
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004624850:3,324,553...3,481,439
Ensembl chrNW_004624850:3,322,782...3,481,512
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004624766:4,042,307...4,085,613
Ensembl chrNW_004624766:4,041,816...4,085,209
JBrowse link
G Rest RE1 silencing transcription factor involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chrNW_004624765:6,018,534...6,050,736 JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chrNW_004624786:9,838,102...9,843,506
Ensembl chrNW_004624786:9,838,227...9,843,332
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004624907:1,758,671...1,760,611
Ensembl chrNW_004624907:1,758,696...1,760,611
JBrowse link
G Apoc3 apolipoprotein C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:12,244,565...12,246,790
Ensembl chrNW_004624784:12,244,646...12,246,790
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:16326698) UniProt PMID:16326698 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964
JBrowse link
G Dcaf5 DDB1 and CUL4 associated factor 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:31,911,080...32,031,634 JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004624737:11,977,397...12,018,437
Ensembl chrNW_004624737:11,977,397...12,018,438
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004624780:5,844,473...5,861,493
Ensembl chrNW_004624780:5,843,141...5,862,039
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO (PMID:16100574) MGI PMID:16100574 NCBI chrNW_004624800:2,533,010...2,543,754
Ensembl chrNW_004624800:2,534,967...2,543,075
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16100574) MGI PMID:16100574 NCBI chrNW_004624732:27,089,776...27,110,170
Ensembl chrNW_004624732:27,087,674...27,104,181
JBrowse link
G Klhl25 kelch like family member 25 involved_in ISO (PMID:27664236) UniProt PMID:27664236 NCBI chrNW_004624768:13,112,589...13,134,855
Ensembl chrNW_004624768:13,110,912...13,121,206
JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869
JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in ISO (PMID:16794074) BHF-UCL PMID:16794074 NCBI chrNW_004624741:1,486,223...1,494,005
Ensembl chrNW_004624741:1,484,863...1,494,829
JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:23932781) UniProt PMID:23932781 NCBI chrNW_004624764:4,223,784...4,358,923
Ensembl chrNW_004624764:4,223,784...4,358,885
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:17767906) MGI
Ensembl
TreeGrafter
PMID:17767906 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624764:11,151,890...11,214,716
Ensembl chrNW_004624764:11,167,206...11,214,844
JBrowse link
negative regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11479628) Ensembl
MGI
PMID:11479628 GO_REF:0000107 NCBI chrNW_004624730:69,941,963...69,959,266
Ensembl chrNW_004624730:69,941,001...69,957,012
JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22275362) MGI
TreeGrafter
PMID:22275362 GO_REF:0000118 NCBI chrNW_004624818:8,347,292...8,352,160
Ensembl chrNW_004624818:8,348,758...8,352,150
JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in
acts_upstream_of_or_within
ISO (PMID:20952387) UniProt
MGI
PMID:20952387 NCBI chrNW_004624759:20,456,055...20,480,670
Ensembl chrNW_004624759:20,455,905...20,481,668
JBrowse link
G Clk2 CDC like kinase 2 involved_in ISO (PMID:20074525) UniProt PMID:20074525 NCBI chrNW_004624885:2,285,116...2,295,959
Ensembl chrNW_004624885:2,284,953...2,296,735
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:28790135), (PMID:29937374) UniProt PMID:28790135 PMID:29937374 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Erfe erythroferrone involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,313,214...3,319,050 JBrowse link
G Gck glucokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:7,844,496...7,885,900
Ensembl chrNW_004624740:7,852,390...7,886,758
JBrowse link
G Gid4 GID complex subunit 4 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624849:3,385,312...3,408,842
Ensembl chrNW_004624849:3,386,101...3,408,924
JBrowse link
G Il6 interleukin 6 ISO In liver RGD PMID:16308834 RGD:2306940 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318
JBrowse link
G Ins insulin involved_in ISO (PMID:8069456) AgBase PMID:8069456 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035
JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:16753578), (PMID:23142079) UniProt PMID:16753578 PMID:23142079 NCBI chrNW_004624795:1,782,367...1,787,408
Ensembl chrNW_004624795:1,782,366...1,788,951
JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24051374) Ensembl
MGI
PMID:24051374 GO_REF:0000107 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049
JBrowse link
G Mst1 macrophage stimulating 1 involved_in ISO (PMID:19720831) UniProt PMID:19720831 NCBI chrNW_004624730:3,612,467...3,617,257
Ensembl chrNW_004624730:3,610,241...3,617,530
JBrowse link
G Mtcl2 microtubule crosslinking factor 2 involved_in ISO (PMID:20813965) UniProt PMID:20813965 NCBI chrNW_004624842:2,669,123...2,734,006
Ensembl chrNW_004624842:2,669,456...2,727,144
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO (PMID:26755581) UniProt PMID:26755581 RGD:10679995 NCBI chrNW_004624913:45,439...48,259
Ensembl chrNW_004624913:45,499...49,060
JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22837305) Ensembl
MGI
PMID:22837305 GO_REF:0000107 NCBI chrNW_004624734:7,191,049...7,204,386
Ensembl chrNW_004624734:7,191,010...7,206,020
JBrowse link
G Sik1 salt inducible kinase 1 involved_in ISO (PMID:16148943) UniProt PMID:16148943 NCBI chrNW_004624745:27,529,037...27,539,253
Ensembl chrNW_004624745:27,528,929...27,539,552
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23142079), (PMID:25009184) UniProt PMID:23142079 PMID:25009184 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO RGD PMID:21901280 RGD:152995490 NCBI chrNW_004624737:33,341,574...33,526,814
Ensembl chrNW_004624737:33,341,029...33,526,928
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:28655758) UniProt PMID:28655758 NCBI chrNW_004624824:6,277,111...6,338,051
Ensembl chrNW_004624824:6,276,354...6,338,227
JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chrNW_004624908:1,658,512...1,661,507
Ensembl chrNW_004624908:1,658,512...1,661,640
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:4,939,683...4,967,327
Ensembl chrNW_004624762:4,939,599...4,967,371
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004624791:11,334,146...12,656,480
Ensembl chrNW_004624791:11,338,510...12,654,812
JBrowse link
negative regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prl prolactin involved_in ISO (PMID:24530842) AgBase PMID:24530842 NCBI chrNW_004624756:4,585,542...4,593,285 JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:3863495) UniProt PMID:3863495 NCBI chrNW_004624751:27,543,768...27,760,536
Ensembl chrNW_004624751:27,543,702...27,759,271
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20042607) UniProt PMID:20042607 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624732:34,232,890...34,294,195
Ensembl chrNW_004624732:34,232,908...34,292,898
JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prmt3 protein arginine methyltransferase 3 involved_in ISO (PMID:33495566) UniProt PMID:33495566 NCBI chrNW_004624766:11,669,732...11,797,133
Ensembl chrNW_004624766:11,670,108...11,795,272
JBrowse link
negative regulation of testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkkl1 dickkopf like acrosomal protein 1 involved_in ISO (PMID:18818293) UniProt PMID:18818293 NCBI chrNW_004624832:4,816,383...4,820,082
Ensembl chrNW_004624832:4,816,277...4,819,740
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:12949260) UniProt PMID:12949260 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392
JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:19502595) BHF-UCL PMID:19502595 NCBI chrNW_004624790:5,509,541...5,515,240
Ensembl chrNW_004624790:5,509,311...5,515,266
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:18485278), (PMID:19502595) BHF-UCL PMID:18485278 PMID:19502595 NCBI chrNW_004624735:6,594,564...6,598,288
Ensembl chrNW_004624735:6,594,695...6,598,757
JBrowse link
nucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in ISO (PMID:33833118) UniProt PMID:33833118 NCBI chrNW_004624769:13,649,603...13,674,578
Ensembl chrNW_004624769:13,649,016...13,674,590
JBrowse link
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (PMID:33833118) UniProt PMID:33833118 NCBI chrNW_004624754:16,333,021...16,334,882
Ensembl chrNW_004624754:16,333,054...16,334,882
JBrowse link
G Qng1 Q-nucleotide N-glycosylase 1 involved_in ISO (PMID:36610787) UniProt PMID:36610787 NCBI chrNW_004624809:7,508,683...7,525,983
Ensembl chrNW_004624809:7,506,605...7,525,788
JBrowse link
octopamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:2,016,066...2,030,240
Ensembl chrNW_004624760:2,015,474...2,029,939
JBrowse link
G LOC101701601 putative DBH-like monooxygenase protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624821:9,598,949...9,603,373 JBrowse link
G LOC101711916 putative DBH-like monooxygenase protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:22,256,119...22,264,715 JBrowse link
G Moxd1 monooxygenase DBH like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:6,379,583...6,471,020
Ensembl chrNW_004624753:6,377,330...6,471,085
JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chrNW_004624737:6,921,619...6,970,113
Ensembl chrNW_004624737:6,921,222...6,970,488
JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004624818:5,048,410...5,142,135
Ensembl chrNW_004624818:5,065,995...5,142,558
JBrowse link
pentose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase involved_in
acts_upstream_of_or_within
ISO (PMID:5643703)
(PMID:14757696), (PMID:15998684), (PMID:1953691)
(PMID:7439685), (PMID:8491670), (PMID:9330624), (PMID:9539108), (PMID:9627357)
BHF-UCL
MGI
PMID:1953691 PMID:5643703 PMID:7439685 PMID:8491670 PMID:9330624 More... NCBI chrNW_004624946:989,376...1,001,787
Ensembl chrNW_004624946:986,107...1,001,955
JBrowse link
G Pgd phosphogluconate dehydrogenase acts_upstream_of_or_within ISO (PMID:8491670) MGI PMID:8491670 NCBI chrNW_004624818:2,261,658...2,274,878
Ensembl chrNW_004624818:2,261,940...2,274,723
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624863:37,148...96,550
Ensembl chrNW_004624863:37,148...95,211
JBrowse link
G LOC106007497 alkaline ceramidase 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624817:70...116,261 JBrowse link
polyprenol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:10,443,712...10,476,240
Ensembl chrNW_004624764:10,443,644...10,476,240
JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:16527843) UniProt PMID:16527843 NCBI chrNW_004624756:17,742,822...17,894,931
Ensembl chrNW_004624756:17,743,834...17,894,753
JBrowse link
G Dab2 DAB adaptor protein 2 ISO RGD PMID:17303656 RGD:7243836 NCBI chrNW_004624759:15,459,436...15,520,225
Ensembl chrNW_004624759:15,459,288...15,520,924
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392
JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497
JBrowse link
G Star steroidogenic acute regulatory protein involved_in ISO (PMID:18403318) BHF-UCL PMID:18403318 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030
JBrowse link
G Stard4 StAR related lipid transfer domain containing 4 involved_in ISO (PMID:18403318) BHF-UCL PMID:18403318 NCBI chrNW_004624743:29,278,327...29,298,050
Ensembl chrNW_004624743:29,282,558...29,293,854
JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chrNW_004624745:28,137,140...28,188,670
Ensembl chrNW_004624745:28,104,744...28,188,704
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chrNW_004624784:14,529,957...14,545,125
Ensembl chrNW_004624784:14,529,976...14,545,246
JBrowse link
G Fdps farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chrNW_004624885:942,998...949,529
Ensembl chrNW_004624885:943,571...949,528
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISO (PMID:19229075) BHF-UCL PMID:19229075 NCBI chrNW_004624774:1,779,168...1,867,321
Ensembl chrNW_004624774:1,779,170...1,867,300
JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004624739:28,995,173...29,074,354
Ensembl chrNW_004624739:28,995,179...29,073,813
JBrowse link
G LOC101701685 cholesterol 7-alpha-monooxygenase involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004624744:33,563,564...33,619,851
Ensembl chrNW_004624744:33,612,901...33,619,869
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004624747:1,296,062...1,389,674
Ensembl chrNW_004624747:1,296,221...1,389,757
JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624829:6,795,563...6,839,416
Ensembl chrNW_004624829:6,795,528...6,834,604
JBrowse link
G Npy1r neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chrNW_004624758:13,542,467...13,545,106
Ensembl chrNW_004624758:13,536,493...13,545,599
JBrowse link
G Paqr3 progestin and adipoQ receptor family member 3 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004624757:12,140,041...12,303,568
Ensembl chrNW_004624757:12,138,681...12,159,661
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) UniProt PMID:33942715 NCBI chrNW_004624785:15,738,231...15,845,051
Ensembl chrNW_004624785:15,739,187...15,845,024
JBrowse link
G Scap SREBF chaperone involved_in ISO (PMID:32322062) UniProt PMID:32322062 NCBI chrNW_004624730:73,926,978...73,975,337
Ensembl chrNW_004624730:73,927,010...73,975,337
JBrowse link
G Scp2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chrNW_004624859:106,405...252,870
Ensembl chrNW_004624859:107,258...252,756
JBrowse link
G Sec14l2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chrNW_004624747:6,719,549...6,742,794
Ensembl chrNW_004624747:6,719,498...6,742,794
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:8833906), (PMID:9062341)
(PMID:9329978)
(PMID:16046411)
(PMID:12177166)
(PMID:12177166), (PMID:32322062)
UniProt
MGI
PMID:8833906 PMID:9062341 PMID:9329978 PMID:12177166 PMID:16046411 More... NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:12177166)
(PMID:33942715), (PMID:34021134)
(PMID:12177166), (PMID:32322062), (PMID:38503280)
UniProt PMID:12177166 PMID:32322062 PMID:33942715 PMID:34021134 PMID:38503280 NCBI chrNW_004624752:6,815,075...6,871,674
Ensembl chrNW_004624752:6,816,468...6,871,567
JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004624764:6,913,027...6,934,650
Ensembl chrNW_004624764:6,921,811...6,933,392
JBrowse link
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:11606482) MGI PMID:11606482 NCBI chrNW_004624775:18,846,222...18,856,093
Ensembl chrNW_004624775:18,849,118...18,855,577
JBrowse link
G Apoa4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:12,237,329...12,240,013
Ensembl chrNW_004624784:12,233,593...12,239,763
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:12,213,205...12,216,039
Ensembl chrNW_004624784:12,213,744...12,216,026
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:10727238) BHF-UCL PMID:10727238 NCBI chrNW_004624907:1,765,467...1,769,786
Ensembl chrNW_004624907:1,765,481...1,769,781
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISO (PMID:23749231) BHF-UCL PMID:23749231 NCBI chrNW_004624850:523,059...598,135
Ensembl chrNW_004624850:522,018...597,469
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:16800817 RGD:1624995 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649
JBrowse link
G Ins insulin involved_in ISO (PMID:14677856) CACAO PMID:14677856 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:23932781) UniProt PMID:23932781 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 involved_in ISO (PMID:23749231) BHF-UCL PMID:23749231 NCBI chrNW_004624771:17,389,141...17,451,881
Ensembl chrNW_004624771:17,387,248...17,451,466
JBrowse link
G Mid1ip1 MID1 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:16,678,350...16,680,691
Ensembl chrNW_004624762:16,678,273...16,680,729
JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (PMID:15118080) BHF-UCL PMID:15118080 NCBI chrNW_004624740:14,150,425...14,187,687
Ensembl chrNW_004624740:14,168,238...14,187,264
JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 involved_in ISO (PMID:17186944) BHF-UCL PMID:17186944 NCBI chrNW_004624832:4,136,052...4,141,648
Ensembl chrNW_004624832:4,132,904...4,140,896
JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:17186944) BHF-UCL PMID:17186944 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795
JBrowse link
G Rgn regucalcin ISO RGD PMID:16817230 RGD:9590221 NCBI chrNW_004624887:3,881,624...3,900,144
Ensembl chrNW_004624887:3,883,213...3,899,277
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:23932781) UniProt PMID:23932781 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276
JBrowse link
G Slc45a3 solute carrier family 45 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:5,564,530...5,583,638
Ensembl chrNW_004624807:5,564,545...5,583,816
JBrowse link
positive regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpp19 cAMP regulated phosphoprotein 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:8,081,940...8,103,429
Ensembl chrNW_004624731:8,081,894...8,103,429
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:29937374) DisProt PMID:29937374 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:28790135) UniProt PMID:28790135 NCBI chrNW_004624926:871,003...893,902
Ensembl chrNW_004624926:871,000...897,777
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:17526931 RGD:10400884 NCBI chrNW_004624817:1,386,876...1,418,129
Ensembl chrNW_004624817:1,386,764...1,418,300
JBrowse link
G Foxo1 forkhead box O1 involved_in
acts_upstream_of_or_within
ISO (PMID:17024043), (PMID:25009184)
(PMID:12783775)
UniProt
MGI
PMID:12783775 PMID:17024043 PMID:25009184 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992
JBrowse link
G Gcg glucagon acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624732:3,361,897...3,370,020
Ensembl chrNW_004624732:3,362,234...3,370,536
JBrowse link
G Gpt glutamic--pyruvic transaminase ISO RGD PMID:25865565 RGD:11342811 NCBI chrNW_004624735:12,355,476...12,359,910
Ensembl chrNW_004624735:12,355,476...12,360,028
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:16893891 PMID:24177414 RGD:10445837 RGD:1624992 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624795:1,782,367...1,787,408
Ensembl chrNW_004624795:1,782,366...1,788,951
JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624821:5,387,212...5,489,013 JBrowse link
G Nnmt nicotinamide N-methyltransferase involved_in ISO (PMID:26168293) UniProt PMID:26168293 NCBI chrNW_004624784:9,765,582...9,783,004
Ensembl chrNW_004624784:9,765,582...9,783,004
JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:34270714 RGD:401831046 NCBI chrNW_004624785:4,147,079...4,195,712
Ensembl chrNW_004624785:4,032,689...4,196,186
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15232616) Ensembl
MGI
PMID:15232616 GO_REF:0000107 NCBI chrNW_004624752:3,646,499...3,702,553
Ensembl chrNW_004624752:3,650,922...3,701,672
JBrowse link
G Ppp4r3a protein phosphatase 4 regulatory subunit 3A acts_upstream_of_or_within ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004624734:11,160,253...11,197,264
Ensembl chrNW_004624734:11,160,356...11,197,817
JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B acts_upstream_of_or_within ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004624833:5,936,196...6,009,565 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:23292513) MGI PMID:23292513 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744
JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:20484139) UniProt PMID:20484139 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:26168293)
(PMID:15692560), (PMID:23142079), (PMID:30193097)
RGD
UniProt
PMID:15692560 PMID:21212096 PMID:23142079 PMID:26168293 PMID:30193097 RGD:9585757 NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:28655758) UniProt PMID:28655758 NCBI chrNW_004624801:10,753,480...10,760,601
Ensembl chrNW_004624801:10,753,333...10,764,122
JBrowse link
G Stk11 serine/threonine kinase 11 ISO RGD PMID:17083919 RGD:2291956 NCBI chrNW_004624828:7,444,339...7,466,926
Ensembl chrNW_004624828:7,445,069...7,467,298
JBrowse link
G Supt20h SPT20 homolog, SAGA complex component acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624776:185,196...223,316
Ensembl chrNW_004624776:185,095...223,325
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:23260145) MGI PMID:23260145 NCBI chrNW_004624737:33,341,574...33,526,814
Ensembl chrNW_004624737:33,341,029...33,526,928
JBrowse link
G Wdr5 WD repeat domain 5 acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004624760:2,275,660...2,291,796
Ensembl chrNW_004624760:2,274,813...2,292,379
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8396727 PMID:8943280 RGD:2315982 RGD:631732 NCBI chrNW_004624783:271,179...323,785
Ensembl chrNW_004624783:279,745...323,772
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) ARUK-UCL PMID:9322919 NCBI chrNW_004624807:5,237,036...5,247,383
Ensembl chrNW_004624807:5,237,036...5,241,845
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004624794:447,572...472,700
Ensembl chrNW_004624794:447,584...472,778
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chrNW_004624855:2,968,111...3,008,728
Ensembl chrNW_004624855:2,969,444...2,970,421
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004624741:28,504,814...28,543,592
Ensembl chrNW_004624741:28,505,037...28,544,122
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004624764:11,996,454...12,025,751
Ensembl chrNW_004624764:11,998,657...11,999,685
JBrowse link
G Pth parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,489,857...5,492,777
Ensembl chrNW_004624766:5,489,800...5,492,871
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004624730:74,371,614...74,392,344
Ensembl chrNW_004624730:74,371,294...74,390,262
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,627,560...26,632,483
Ensembl chrNW_004624740:26,627,473...26,632,027
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in ISO (PMID:10493819) BHF-UCL PMID:10493819 NCBI chrNW_004624738:29,902,364...29,967,384
Ensembl chrNW_004624738:29,903,571...29,966,915
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004624752:11,327,881...11,414,037
Ensembl chrNW_004624752:11,327,877...11,413,669
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004624730:30,470,894...30,478,269
Ensembl chrNW_004624730:30,471,610...30,476,941
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) ARUK-UCL PMID:8670200 NCBI chrNW_004624817:3,648,829...3,672,051
Ensembl chrNW_004624817:3,648,829...3,671,852
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004624773:20,108,383...20,130,630
Ensembl chrNW_004624773:20,108,004...20,130,630
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004624789:3,589,863...3,605,655
Ensembl chrNW_004624789:3,592,214...3,605,537
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase acts_upstream_of ISO (PMID:16731528) ParkinsonsUK-UCL PMID:16731528 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042
JBrowse link
positive regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:20133449 RGD:10059648 NCBI chrNW_004624755:7,826,219...8,460,746
Ensembl chrNW_004624755:8,375,596...8,465,297
JBrowse link
positive regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO RGD PMID:8260938 RGD:2306959 NCBI chrNW_004624811:765,338...782,203
Ensembl chrNW_004624811:764,940...782,198
JBrowse link
G Avp arginine vasopressin ISO RGD PMID:17254553 RGD:2300349 NCBI chrNW_004624741:4,208,305...4,210,097
Ensembl chrNW_004624741:4,208,329...4,210,071
JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:17254553 RGD:2300349 NCBI chrNW_004624802:4,893,172...4,900,177
Ensembl chrNW_004624802:4,894,235...4,900,276
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24569872) ARUK-UCL PMID:24569872 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514
JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:9786861 RGD:2304243 NCBI chrNW_004624733:42,998,948...43,048,392
Ensembl chrNW_004624733:42,999,339...43,048,285
JBrowse link
G Pla2g3 phospholipase A2 group III involved_in ISO (PMID:23624557) UniProt PMID:23624557 NCBI chrNW_004624747:7,602,848...7,607,872
Ensembl chrNW_004624747:7,603,277...7,607,753
JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:16203828 RGD:1642461 NCBI chrNW_004624814:6,597,248...6,744,294
Ensembl chrNW_004624814:6,597,005...6,744,286
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:24287039) AgBase PMID:24287039 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728
JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004624744:17,838,047...17,868,423
Ensembl chrNW_004624744:17,837,609...17,868,431
JBrowse link
positive regulation of ubiquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pptc7 protein phosphatase targeting COQ7 involved_in ISO (PMID:30267671) UniProt PMID:30267671 NCBI chrNW_004624747:21,320,525...21,358,830
Ensembl chrNW_004624747:21,320,617...21,358,904
JBrowse link
positive regulation of unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18854420) UniProt PMID:18854420 NCBI chrNW_004624946:421,113...439,961
Ensembl chrNW_004624946:421,132...440,075
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:854,297...912,498
Ensembl chrNW_004624778:847,879...909,727
JBrowse link
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:1690216) BHF-UCL PMID:1690216 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531
JBrowse link
progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:1703300) UniProt PMID:1703300 NCBI chrNW_004624859:106,405...252,870
Ensembl chrNW_004624859:107,258...252,756
JBrowse link
G Stard3 StAR related lipid transfer domain containing 3 acts_upstream_of_or_within ISO (PMID:14963026) MGI PMID:14963026 NCBI chrNW_004624795:3,414,431...3,431,994
Ensembl chrNW_004624795:3,413,935...3,422,657
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624737:6,921,619...6,970,113
Ensembl chrNW_004624737:6,921,222...6,970,488
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624801:10,777,407...10,781,572
Ensembl chrNW_004624801:10,776,747...10,781,614
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624807:37,742...63,887
Ensembl chrNW_004624807:31,830...63,985
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624735:13,136,287...13,142,051 JBrowse link
propionate biosynthetic process term browser