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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule biosynthetic process
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Accession:GO:0044283 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule biosynthesis


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'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine--homocysteine S-methyltransferase involved_in ISO (PMID:10529246) UniProt PMID:10529246 NCBI chrNW_004955425:21,992,219...22,009,389
Ensembl chrNW_004955425:21,991,665...22,009,855
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:1881876)
(PMID:23704330)
BHF-UCL PMID:1881876 PMID:23704330 NCBI chrNW_004955466:5,422,141...5,485,773
Ensembl chrNW_004955466:5,420,702...5,485,773
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in ISO (PMID:12937168) BHF-UCL PMID:12937168 NCBI chrNW_004955439:10,432,732...10,621,991
Ensembl chrNW_004955439:10,438,883...10,621,768
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase like 2 involved_in ISO (PMID:17034760) BHF-UCL PMID:17034760 NCBI chrNW_004955424:526,967...543,603
Ensembl chrNW_004955424:526,602...543,603
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chrNW_004955439:1,773,884...1,794,325
Ensembl chrNW_004955439:1,773,861...1,794,328
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO (PMID:11304534) UniProt PMID:11304534 NCBI chrNW_004955449:5,360,486...5,380,279
Ensembl chrNW_004955449:5,359,617...5,380,267
JBrowse link
G LOC102010850 cytochrome P450 1A1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chrNW_004955450:3,183,958...3,189,488
Ensembl chrNW_004955450:3,183,750...3,189,488
JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004955415:31,117,542...31,154,654
Ensembl chrNW_004955415:31,117,303...31,154,654
JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004955422:26,450,899...26,500,336
Ensembl chrNW_004955422:26,451,598...26,500,546
JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5'-nucleotidase ecto acts_upstream_of_or_within ISO (PMID:16547283) RGD
MGI
PMID:16547283 PMID:30269308 RGD:152995394 NCBI chrNW_004955411:12,891,236...12,946,324
Ensembl chrNW_004955411:12,891,236...12,948,406
JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004955442:16,047,965...16,108,862
Ensembl chrNW_004955442:16,045,895...16,108,862
JBrowse link
androst-4-ene-3,17-dione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inhba inhibin subunit beta A acts_upstream_of_or_within ISO (PMID:32954300) MGI PMID:32954300 NCBI chrNW_004955460:2,054,879...2,066,628
Ensembl chrNW_004955460:2,046,588...2,066,609
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:22525402), (PMID:29976570) UniProt PMID:22525402 PMID:29976570 NCBI chrNW_004955455:7,961,296...7,992,235
Ensembl chrNW_004955455:7,961,264...7,995,946
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:25168382) UniProt PMID:25168382 NCBI chrNW_004955423:280,497...359,711
Ensembl chrNW_004955423:280,497...359,711
JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO (PMID:27884763) UniProt PMID:27884763 NCBI chrNW_004955430:1,638,931...1,665,308
Ensembl chrNW_004955430:1,638,431...1,665,141
JBrowse link
G Akr1d1 aldo-keto reductase family 1 member D1 involved_in
acts_upstream_of_or_within
ISO (PMID:7508385) MGI PMID:7508385 NCBI chrNW_004955494:4,799,706...4,856,100
Ensembl chrNW_004955494:4,799,450...4,854,696
JBrowse link
G Amacr alpha-methylacyl-CoA racemase ISO RGD PMID:11964182 RGD:704372 NCBI chrNW_004955426:19,570,179...19,580,920
Ensembl chrNW_004955426:19,570,070...19,580,818
JBrowse link
G Baat bile acid-CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727), (PMID:8034703) UniProt PMID:8034703 PMID:12810727 NCBI chrNW_004955419:24,469,213...24,521,728
Ensembl chrNW_004955419:24,443,172...24,520,467
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO (PMID:22912762) MGI PMID:22912762 NCBI chrNW_004955486:4,941,143...4,955,693
Ensembl chrNW_004955486:4,941,143...4,955,693
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:11279518) MGI PMID:11279518 NCBI chrNW_004955455:10,694,102...10,717,613
Ensembl chrNW_004955455:10,694,102...10,717,613
JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:12917011) UniProt PMID:12917011 NCBI chrNW_004955475:478,690...481,029
Ensembl chrNW_004955475:478,690...481,029
JBrowse link
G LOC102004889 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:11412116), (PMID:9660774) UniProt PMID:9660774 PMID:11412116 NCBI chrNW_004955453:14,601,495...14,647,383
Ensembl chrNW_004955453:14,601,444...14,647,366
JBrowse link
G LOC102006164 24-hydroxycholesterol 7-alpha-hydroxylase involved_in ISO (PMID:10748047) UniProt PMID:10748047 NCBI chrNW_004955437:11,444,780...11,497,268
Ensembl chrNW_004955437:11,444,220...11,497,084
JBrowse link
G LOC102008593 cholesterol 7-alpha-monooxygenase involved_in ISO (PMID:19965590)
PMID:1694852
UniProt PMID:1694852 PMID:19965590 RGD:70534 NCBI chrNW_004955454:17,035,105...17,078,854
Ensembl chrNW_004955454:17,036,204...17,042,756
JBrowse link
G LOC102019604 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase involved_in ISO (PMID:14643796)
(PMID:12393855)
UniProt PMID:12393855 PMID:14643796 NCBI chrNW_004955420:27,988,067...27,990,637 JBrowse link
G LOC102022645 25-hydroxycholesterol 7-alpha-hydroxylase involved_in ISO (PMID:10748047) UniProt PMID:10748047 NCBI chrNW_004955444:14,274,818...14,446,068
Ensembl chrNW_004955444:14,275,345...14,444,426
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chrNW_004955444:3,811,972...3,830,666
Ensembl chrNW_004955444:3,811,973...3,830,666
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chrNW_004955409:4,077,685...4,112,828
Ensembl chrNW_004955409:4,077,149...4,112,828
JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chrNW_004955584:1,112,387...1,121,500
Ensembl chrNW_004955584:1,112,117...1,121,323
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:15382124 RGD:1600081 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102004889 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:15465040) UniProt PMID:15465040 NCBI chrNW_004955453:14,601,495...14,647,383
Ensembl chrNW_004955453:14,601,444...14,647,366
JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
(PMID:15972816)
BHF-UCL
UniProt
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 More... NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001
JBrowse link
G LOC102024786 vitamin D 25-hydroxylase involved_in ISO (PMID:15465040), (PMID:18511070) UniProt PMID:15465040 PMID:18511070 NCBI chrNW_004955414:29,929,130...29,948,151
Ensembl chrNW_004955414:29,928,644...29,948,484
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:20097752)
(PMID:20097752), (PMID:24891507)
UniProt
MGI
PMID:20097752 PMID:24891507 NCBI chrNW_004955422:18,051,721...18,061,500
Ensembl chrNW_004955422:18,051,721...18,061,487
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within ISO (PMID:8647961) MGI PMID:8647961 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Cftr CF transmembrane conductance regulator acts_upstream_of_or_within ISO (PMID:17085523) MGI PMID:17085523 NCBI chrNW_004955432:23,179,645...23,328,347
Ensembl chrNW_004955432:23,178,866...23,328,382
JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within
involved_in
ISO (PMID:11519011)
(PMID:14684813)
(PMID:14684813), (PMID:16321981), (PMID:16513830)
MGI
UniProt
PMID:11519011 PMID:14684813 PMID:16321981 PMID:16513830 NCBI chrNW_004955464:4,533,928...4,557,893
Ensembl chrNW_004955464:4,533,928...4,558,133
JBrowse link
G Dhcr7 7-dehydrocholesterol reductase involved_in ISO (PMID:9465114) RGD
UniProt
PMID:9465114 PMID:9831636 PMID:10329655 RGD:2316918 RGD:632010 NCBI chrNW_004955422:15,119,155...15,136,771
Ensembl chrNW_004955422:15,119,173...15,136,771
JBrowse link
G Ebp EBP cholestenol delta-isomerase involved_in ISO (PMID:9894009) RGD
UniProt
PMID:9894009 PMID:11171067 RGD:628445 NCBI chrNW_004955543:92,553...98,370
Ensembl chrNW_004955543:92,122...98,370
JBrowse link
G Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO RGD PMID:16440058 RGD:1626611 NCBI chrNW_004955403:53,068,011...53,081,499
Ensembl chrNW_004955403:53,067,637...53,081,499
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) BHF-UCL PMID:12027950 NCBI chrNW_004955580:1,045,294...1,058,129
Ensembl chrNW_004955580:1,045,294...1,057,083
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
ISO (PMID:23063590)
(PMID:15845870), (PMID:7798939), (PMID:8647961)
CACAO
MGI
PMID:7798939 PMID:8647961 PMID:15845870 PMID:23063590 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745
JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in
acts_upstream_of_or_within
ISO (PMID:12829805) UniProt
MGI
PMID:12829805 NCBI chrNW_004955462:13,555,488...13,574,506
Ensembl chrNW_004955462:13,557,292...13,574,593
JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
ISO (PMID:32322062)
(PMID:16955138)
UniProt
MGI
PMID:16955138 PMID:32322062 NCBI chrNW_004955491:8,333,624...8,344,658
Ensembl chrNW_004955491:8,335,359...8,344,658
JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
ISO (PMID:32322062)
(PMID:16955138)
UniProt
MGI
PMID:16955138 PMID:32322062 NCBI chrNW_004955459:11,571,582...11,596,069
Ensembl chrNW_004955459:11,571,145...11,592,146
JBrowse link
G Lbr lamin B receptor involved_in ISO (PMID:16784888)
(PMID:22140257)
(PMID:18785926)
(PMID:27336722)
UniProt PMID:16784888 PMID:18785926 PMID:22140257 PMID:27336722 NCBI chrNW_004955520:401,733...418,279 JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:25147230), (PMID:29599133) MGI PMID:25147230 PMID:29599133 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142
JBrowse link
G Lss lanosterol synthase involved_in ISO PMID:7568116
(PMID:17186944)
RGD
UniProt
BHF-UCL
PMID:1429550 PMID:7568116 PMID:16440058 PMID:17186944 RGD:1626611 RGD:2316919 RGD:728996 NCBI chrNW_004955407:42,633,658...42,653,399
Ensembl chrNW_004955407:42,633,658...42,653,399
JBrowse link
G Mvk mevalonate kinase involved_in ISO (PMID:1377680) UniProt PMID:1377680 NCBI chrNW_004955455:8,933,250...8,953,883
Ensembl chrNW_004955455:8,930,125...8,953,894
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chrNW_004955456:7,528,452...7,547,714
Ensembl chrNW_004955456:7,528,423...7,547,720
JBrowse link
G Pmvk phosphomevalonate kinase involved_in ISO (PMID:8663599) UniProt PMID:8663599 NCBI chrNW_004955545:1,421,562...1,440,038
Ensembl chrNW_004955545:1,421,562...1,440,038
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 acts_upstream_of ISO (PMID:9329978) MGI PMID:9329978 NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046
JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in ISO (PMID:16784888)
(PMID:18785926)
UniProt PMID:16784888 PMID:18785926 NCBI chrNW_004955422:20,086,994...20,091,707
Ensembl chrNW_004955422:20,086,994...20,091,707
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102027002 lanosterol 14-alpha demethylase ISO RGD PMID:7581240 RGD:2316902 NCBI chrNW_004955432:9,092,923...9,112,615
Ensembl chrNW_004955432:9,092,933...9,112,615
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) UniProt PMID:11519011 NCBI chrNW_004955464:4,533,928...4,557,893
Ensembl chrNW_004955464:4,533,928...4,558,133
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr7 7-dehydrocholesterol reductase involved_in ISO (PMID:38297129), (PMID:38297130) UniProt PMID:38297129 PMID:38297130 NCBI chrNW_004955422:15,119,155...15,136,771
Ensembl chrNW_004955422:15,119,173...15,136,771
JBrowse link
G Sc5d sterol-C5-desaturase involved_in ISO PMID:4019441
(PMID:10786622)
RGD
UniProt
PMID:4019441 PMID:7961720 PMID:10786622 RGD:2316911 RGD:405866208 NCBI chrNW_004955412:22,274,131...22,288,870
Ensembl chrNW_004955412:22,274,250...22,288,870
JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chrNW_004955507:1,892,087...1,946,526
Ensembl chrNW_004955507:1,892,061...1,946,703
JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:7053379 RGD:10755426 NCBI chrNW_004955469:9,203,433...9,227,526
Ensembl chrNW_004955469:9,203,434...9,227,865
JBrowse link
G Otc ornithine transcarbamylase involved_in ISO (PMID:2556444), (PMID:8112735) RGD
BHF-UCL
PMID:2556444 PMID:8112735 PMID:9472964 RGD:4144071 NCBI chrNW_004955601:481,524...543,176
Ensembl chrNW_004955601:481,480...543,176
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004955442:16,047,965...16,108,862
Ensembl chrNW_004955442:16,045,895...16,108,862
JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in
ISO (PMID:15028668)
(PMID:8651275)
RGD
MGI
UniProt
PMID:8651275 PMID:15028668 PMID:15533043 RGD:1359081 NCBI chrNW_004955495:6,536,541...6,539,424
Ensembl chrNW_004955495:6,536,544...6,539,424
JBrowse link
G Gatm glycine amidinotransferase acts_upstream_of_or_within ISO (PMID:9218780) MGI PMID:9218780 NCBI chrNW_004955409:8,068,524...8,084,603
Ensembl chrNW_004955409:8,068,476...8,084,603
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chrNW_004955438:16,500,219...16,505,394
Ensembl chrNW_004955438:16,500,633...16,501,691
JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:28973536) MGI PMID:28973536 NCBI chrNW_004955467:6,519,873...6,535,321
Ensembl chrNW_004955467:6,519,873...6,537,753
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in ISO (PMID:1380156) BHF-UCL PMID:1380156 NCBI chrNW_004955419:5,678,750...5,699,305
Ensembl chrNW_004955419:5,678,694...5,699,305
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:1380156), (PMID:7592599), (PMID:7947975)
(PMID:12925531)
(PMID:1419907)
UniProt
MGI
PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171
JBrowse link
G Sphk1 sphingosine kinase 1 ISO RGD PMID:18723875 RGD:2311353 NCBI chrNW_004955506:5,902,079...5,906,639
Ensembl chrNW_004955506:5,902,345...5,904,988
JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in
acts_upstream_of_or_within
ISO (PMID:24416422)
(PMID:15030387)
BHF-UCL
MGI
PMID:15030387 PMID:24416422 NCBI chrNW_004955407:38,924,355...38,939,790
Ensembl chrNW_004955407:38,924,321...38,939,790
JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO (PMID:10212249) UniProt PMID:10212249 NCBI chrNW_004955423:21,542,587...21,567,935
Ensembl chrNW_004955423:21,542,179...21,567,786
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:12468440) UniProt PMID:12468440 NCBI chrNW_004955455:8,082,578...8,099,523 JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cth cystathionine gamma-lyase involved_in ISO (PMID:19428278) BHF-UCL PMID:19428278 NCBI chrNW_004955423:21,542,587...21,567,935
Ensembl chrNW_004955423:21,542,179...21,567,786
JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within
ISO (PMID:11054547), (PMID:15193426)
(PMID:10557334), (PMID:11054547), (PMID:12021263), (PMID:15710237)
UniProt
MGI
PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 NCBI chrNW_004955481:919,692...940,066
Ensembl chrNW_004955481:871,654...937,770
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) UniProt PMID:10781601 NCBI chrNW_004955460:12,847,440...12,875,614
Ensembl chrNW_004955460:12,847,440...12,875,614
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) MGI PMID:11470797 NCBI chrNW_004955416:7,391,281...7,393,137
Ensembl chrNW_004955416:7,391,282...7,392,355
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) UniProt PMID:16505484 NCBI chrNW_004955526:348,673...393,328
Ensembl chrNW_004955526:348,519...392,507
JBrowse link
G Ust uronyl 2-sulfotransferase involved_in ISO (PMID:10187838) UniProt PMID:10187838 NCBI chrNW_004955439:12,122,935...12,406,368
Ensembl chrNW_004955439:12,125,591...12,406,271
JBrowse link
diol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 ISO RGD PMID:2507189 RGD:11252156 NCBI chrNW_004955520:116,363...142,983
Ensembl chrNW_004955520:116,363...128,665
JBrowse link
dolichol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdds dehydrodolichyl diphosphate synthase subunit involved_in ISO (PMID:28842490) UniProt PMID:28842490 NCBI chrNW_004955452:5,811,053...5,844,992
Ensembl chrNW_004955452:5,811,053...5,845,580
JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO (PMID:38821050) UniProt PMID:38821050 NCBI chrNW_004955499:1,360,636...1,471,141 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within ISO (PMID:25066056) MGI PMID:25066056 NCBI chrNW_004955436:825,387...850,558
Ensembl chrNW_004955436:825,387...850,558
JBrowse link
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO (PMID:38821050) UniProt PMID:38821050 NCBI chrNW_004955447:15,578,661...15,588,218 JBrowse link
fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:25168382) UniProt PMID:25168382 NCBI chrNW_004955423:280,497...359,711
Ensembl chrNW_004955423:280,497...359,711
JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in ISO (PMID:20952656) RGD
UniProt
PMID:11735100 PMID:20952656 RGD:2317316 NCBI chrNW_004955451:679,033...909,892
Ensembl chrNW_004955451:600,254...909,892
JBrowse link
G Acacb acetyl-CoA carboxylase beta acts_upstream_of_or_within ISO (PMID:17210641) MGI PMID:17210641 NCBI chrNW_004955455:10,282,308...10,427,439
Ensembl chrNW_004955455:10,308,192...10,426,076
JBrowse link
G Acly ATP citrate lyase involved_in ISO (PMID:10653665), (PMID:19286649) RGD
UniProt
PMID:10653665 PMID:11735100 PMID:19286649 RGD:2317316 NCBI chrNW_004955451:16,058,916...16,091,831
Ensembl chrNW_004955451:16,058,727...16,092,589
JBrowse link
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21846720) UniProt PMID:21846720 NCBI chrNW_004955541:2,837,487...2,876,220
Ensembl chrNW_004955541:2,837,448...2,876,316
JBrowse link
G Acsl3 acyl-CoA synthetase long chain family member 3 ISO RGD PMID:8663269 RGD:70280 NCBI chrNW_004955453:10,916,423...10,963,986
Ensembl chrNW_004955453:10,913,786...10,947,963
JBrowse link
G Acsm1 acyl-CoA synthetase medium chain family member 1 acts_upstream_of_or_within ISO (PMID:11470804) MGI PMID:11470804 NCBI chrNW_004955442:4,133,817...4,173,932
Ensembl chrNW_004955442:4,133,308...4,174,330
JBrowse link
G Acsm3 acyl-CoA synthetase medium chain family member 3 acts_upstream_of_or_within ISO (PMID:11470804) MGI PMID:11470804 NCBI chrNW_004955493:73,306...95,521
Ensembl chrNW_004955493:72,633...96,348
JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISO (PMID:25203508) UniProt PMID:25203508 NCBI chrNW_004955403:37,201,474...37,226,414
Ensembl chrNW_004955403:37,206,634...37,226,407
JBrowse link
G Fasn fatty acid synthase acts_upstream_of_or_within ISO (PMID:22331133) RGD
MGI
PMID:15715522 PMID:22331133 RGD:2317317 NCBI chrNW_004955506:1,063,002...1,079,939
Ensembl chrNW_004955506:1,063,002...1,079,939
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:10852923) MGI PMID:10852923 NCBI chrNW_004955455:10,694,102...10,717,613
Ensembl chrNW_004955455:10,694,102...10,717,613
JBrowse link
G Hsd17b8 hydroxysteroid 17-beta dehydrogenase 8 involved_in ISO (PMID:25203508) UniProt PMID:25203508 NCBI chrNW_004955437:1,778,276...1,780,397
Ensembl chrNW_004955437:1,778,276...1,780,397
JBrowse link
G Lipc lipase C, hepatic type involved_in ISO (PMID:182536) BHF-UCL PMID:182536 NCBI chrNW_004955450:15,947,869...16,062,449
Ensembl chrNW_004955450:15,948,187...16,048,766
JBrowse link
G Lpl lipoprotein lipase involved_in ISO (PMID:182536) BHF-UCL PMID:182536 NCBI chrNW_004955403:43,646,084...43,672,116
Ensembl chrNW_004955403:43,646,084...43,673,967
JBrowse link
G Mcat malonyl-CoA-acyl carrier protein transacylase involved_in ISO (PMID:12882974) UniProt PMID:12882974 NCBI chrNW_004955413:28,296,507...28,301,669
Ensembl chrNW_004955413:28,296,964...28,301,722
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:1918029) BHF-UCL PMID:1918029 RGD:8553780 NCBI chrNW_004955455:11,308,848...11,316,245
Ensembl chrNW_004955455:11,308,643...11,316,254
JBrowse link
fatty acid elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:26108493) UniProt PMID:26108493 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 acts_upstream_of_or_within ISO (PMID:11567032) MGI PMID:11567032 NCBI chrNW_004955496:179,634...301,908
Ensembl chrNW_004955496:179,977...301,918
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:18554506) UniProt PMID:18554506 NCBI chrNW_004955429:10,394,046...10,406,945
Ensembl chrNW_004955429:10,384,708...10,406,945
JBrowse link
G Hacd2 3-hydroxyacyl-CoA dehydratase 2 involved_in ISO (PMID:18554506) UniProt PMID:18554506 NCBI chrNW_004955427:22,642,509...22,733,170
Ensembl chrNW_004955427:22,642,478...22,734,271
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18554506) UniProt PMID:18554506 NCBI chrNW_004955450:9,923,560...9,947,519
Ensembl chrNW_004955450:9,923,560...9,942,658
JBrowse link
G Hacd4 3-hydroxyacyl-CoA dehydratase 4 involved_in ISO (PMID:18554506) UniProt PMID:18554506 NCBI chrNW_004955434:23,235,928...23,261,288
Ensembl chrNW_004955434:23,235,928...23,261,788
JBrowse link
G Tecr trans-2,3-enoyl-CoA reductase involved_in ISO (PMID:12482854) UniProt PMID:12482854 NCBI chrNW_004955415:33,112,098...33,138,810
Ensembl chrNW_004955415:33,135,646...33,143,145
JBrowse link
fatty acid elongation, monounsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO (PMID:20166112) UniProt PMID:20166112 NCBI chrNW_004955537:2,945,509...2,950,146
Ensembl chrNW_004955537:2,945,509...2,950,146
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO (PMID:20937905)
(PMID:14581464)
UniProt PMID:14581464 PMID:20937905 NCBI chrNW_004955485:8,141,818...8,144,458
Ensembl chrNW_004955485:8,142,081...8,144,286
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISO (PMID:20427700) UniProt PMID:20427700 NCBI chrNW_004955411:2,747,232...2,812,544
Ensembl chrNW_004955411:2,747,232...2,812,544
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO PMID:12005057 UniProt PMID:12005057 RGD:8554529 NCBI chrNW_004955496:179,634...301,908
Ensembl chrNW_004955496:179,977...301,918
JBrowse link
fatty acid elongation, polyunsaturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl2 ELOVL fatty acid elongase 2 involved_in ISO (PMID:12371743), (PMID:20937905)
(PMID:21106902)
UniProt PMID:12371743 PMID:20937905 PMID:21106902 NCBI chrNW_004955465:3,413,923...3,433,558
Ensembl chrNW_004955465:3,413,923...3,430,714
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO (PMID:20937905) UniProt PMID:20937905 NCBI chrNW_004955485:8,141,818...8,144,458
Ensembl chrNW_004955485:8,142,081...8,144,286
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO (PMID:23479632) UniProt PMID:23479632 NCBI chrNW_004955502:7,764,451...7,774,503
Ensembl chrNW_004955502:7,764,359...7,774,572
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISO (PMID:20427700), (PMID:20937905)
PMID:12005057
UniProt PMID:12005057 PMID:20427700 PMID:20937905 RGD:8554529 NCBI chrNW_004955411:2,747,232...2,812,544
Ensembl chrNW_004955411:2,747,232...2,812,544
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in ISO (PMID:20937905) UniProt PMID:20937905 NCBI chrNW_004955446:7,732,291...7,758,842
Ensembl chrNW_004955446:7,700,511...7,758,842
JBrowse link
fatty acid elongation, saturated fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO (PMID:20166112), (PMID:20937905) UniProt PMID:20166112 PMID:20937905 NCBI chrNW_004955537:2,945,509...2,950,146
Ensembl chrNW_004955537:2,945,509...2,950,146
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in ISO (PMID:20937905)
(PMID:14581464)
UniProt PMID:14581464 PMID:20937905 NCBI chrNW_004955485:8,141,818...8,144,458
Ensembl chrNW_004955485:8,142,081...8,144,286
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in ISO (PMID:20937905) UniProt PMID:20937905 NCBI chrNW_004955502:7,764,451...7,774,503
Ensembl chrNW_004955502:7,764,359...7,774,572
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO (PMID:26214738)
PMID:12005057
(PMID:20937905)
UniProt PMID:12005057 PMID:20937905 PMID:26214738 RGD:8554529 NCBI chrNW_004955496:179,634...301,908
Ensembl chrNW_004955496:179,977...301,918
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in ISO (PMID:19826053) UniProt PMID:19826053 NCBI chrNW_004955446:7,732,291...7,758,842
Ensembl chrNW_004955446:7,700,511...7,758,842
JBrowse link
G Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 involved_in ISO (PMID:25003994) UniProt PMID:25003994 NCBI chrNW_004955422:3,721,452...3,864,801
Ensembl chrNW_004955422:3,717,666...3,864,801
JBrowse link
formaldehyde biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm3a lysine demethylase 3A involved_in ISO (PMID:16603237) UniProt PMID:16603237 NCBI chrNW_004955424:1,164,384...1,218,607
Ensembl chrNW_004955424:1,171,827...1,218,607
JBrowse link
fructose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:3365415), (PMID:6870831), (PMID:8487505)
(PMID:18799757)
(PMID:9604875)
UniProt
MGI
PMID:3365415 PMID:6870831 PMID:8487505 PMID:9604875 PMID:18799757 NCBI chrNW_004955409:8,305,819...8,333,733
Ensembl chrNW_004955409:8,303,602...8,333,869
JBrowse link
gamma-aminobutyric acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:19540876 RGD:9588538 NCBI chrNW_004955442:9,422,849...9,516,054
Ensembl chrNW_004955442:9,422,849...9,516,103
JBrowse link
G Gad1 glutamate decarboxylase 1 involved_in ISO (PMID:9177246)
(PMID:17384644)
PMID:1924335
RGD
UniProt
PMID:1924335 PMID:9177246 PMID:17384644 PMID:17712632 RGD:6480258 RGD:728511 NCBI chrNW_004955449:3,964,006...4,001,850
Ensembl chrNW_004955449:3,963,705...4,001,850
JBrowse link
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:22108820 RGD:401900601 NCBI chrNW_004955429:3,092,977...3,170,128
Ensembl chrNW_004955429:3,096,453...3,169,259
JBrowse link
G Slc1a3 solute carrier family 1 member 3 acts_upstream_of_or_within ISO (PMID:15305132) MGI PMID:15305132 NCBI chrNW_004955426:21,371,985...21,450,749
Ensembl chrNW_004955426:21,371,985...21,451,069
JBrowse link
G Slc38a1 solute carrier family 38 member 1 involved_in ISO (PMID:32668809) UniProt PMID:32668809 NCBI chrNW_004955500:5,393,211...5,468,827
Ensembl chrNW_004955500:5,398,358...5,462,042
JBrowse link
gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoc aldolase, fructose-bisphosphate C involved_in ISO (PMID:24958256) MGI PMID:24958256 NCBI chrNW_004955481:4,576,913...4,580,999
Ensembl chrNW_004955481:4,576,913...4,580,999
JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (PMID:11916968) MGI PMID:11916968 NCBI chrNW_004955406:4,875,672...4,889,173
Ensembl chrNW_004955406:4,875,613...4,889,242
JBrowse link
G Atf4 activating transcription factor 4 acts_upstream_of_or_within ISO (PMID:11916968) MGI PMID:11916968 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of ISO (PMID:22275362) MGI PMID:22275362 NCBI chrNW_004955486:9,541,466...9,545,231
Ensembl chrNW_004955486:9,541,367...9,547,097
JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 involved_in ISO (PMID:16148943) UniProt PMID:16148943 NCBI chrNW_004955545:542,916...554,675
Ensembl chrNW_004955545:541,849...554,884
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:20852621) UniProt PMID:20852621 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:30679508) MGI PMID:30679508 NCBI chrNW_004955486:4,275,371...4,287,152
Ensembl chrNW_004955486:4,274,238...4,289,809
JBrowse link
G Eno2 enolase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chrNW_004955413:4,498,625...4,506,769
Ensembl chrNW_004955413:4,498,625...4,506,769
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO (PMID:30150719)
(PMID:19259699), (PMID:20096900)
RGD
MGI
UniProt
PMID:4353083 PMID:11440903 PMID:19259699 PMID:20096900 PMID:30150719 RGD:2302851 RGD:2302970 NCBI chrNW_004955422:21,537,337...21,569,174
Ensembl chrNW_004955422:21,536,667...21,569,433
JBrowse link
G Fbp2 fructose-bisphosphatase 2 ISO RGD PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 NCBI chrNW_004955422:21,508,906...21,530,296
Ensembl chrNW_004955422:21,505,857...21,530,302
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 involved_in ISO (PMID:33359667)
(PMID:8211187)
RGD
MGI
UniProt
PMID:4303362 PMID:4353083 PMID:8211187 PMID:11440903 PMID:33359667 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chrNW_004955451:16,672,512...16,680,001
Ensembl chrNW_004955451:16,672,979...16,680,001
JBrowse link
G G6pc3 glucose-6-phosphatase catalytic subunit 3 involved_in ISO (PMID:15661744) RGD
MGI
PMID:4303362 PMID:4353083 PMID:11440903 PMID:15661744 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chrNW_004955451:17,219,763...17,221,889
Ensembl chrNW_004955451:17,219,551...17,221,689
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:28258188) RGD
MGI
PMID:15720133 PMID:28258188 RGD:13792662 RGD:2302795 NCBI chrNW_004955413:4,162,467...4,166,783
Ensembl chrNW_004955413:4,162,467...4,166,783
JBrowse link
G Gcg glucagon acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955449:11,708,152...11,716,429
Ensembl chrNW_004955449:11,708,152...11,716,429
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:17545671) MGI PMID:17545671 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12093800) MGI PMID:12093800 NCBI chrNW_004955547:676,661...683,906
Ensembl chrNW_004955547:676,342...690,777
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:12093800) MGI PMID:12093800 NCBI chrNW_004955449:16,695,855...16,804,184
Ensembl chrNW_004955449:16,695,435...16,802,908
JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in ISO (PMID:31891762) MGI PMID:31891762 NCBI chrNW_004955468:3,980,999...4,007,553
Ensembl chrNW_004955468:3,980,999...4,008,652
JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 ISO RGD PMID:25865565 RGD:11342811 NCBI chrNW_004955474:8,248,622...8,285,449
Ensembl chrNW_004955474:8,250,759...8,285,227
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
JBrowse link
G Lepr leptin receptor acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in ISO (PMID:12581790) MGI PMID:12581790 NCBI chrNW_004955456:14,819,406...14,833,547
Ensembl chrNW_004955456:14,819,406...14,837,142
JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:10938127)
(PMID:23423574)
(PMID:31006591)
MGI
RGD
PMID:4353083 PMID:10938127 PMID:23423574 PMID:31006591 RGD:2302851 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:29230018), (PMID:34156032)
(PMID:15347677)
(PMID:19643083)
(PMID:11916968)
(PMID:10938127)
(PMID:30193097)
PMID:4186849
(PMID:26971250)
RGD
UniProt
MGI
BHF-UCL
PMID:4186849 PMID:4303362 PMID:4353083 PMID:6049928 PMID:10938127 More... RGD:2302850 RGD:2302851 RGD:2302970 RGD:2302971 RGD:8553288 NCBI chrNW_004955445:1,909,012...1,914,032
Ensembl chrNW_004955445:1,908,946...1,915,002
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in ISO (PMID:23466304) RGD
MGI
PMID:4353083 PMID:6049928 PMID:11440903 PMID:23466304 RGD:2302851 RGD:2302970 RGD:2302971 NCBI chrNW_004955409:36,288,402...36,296,761
Ensembl chrNW_004955409:36,288,568...36,296,828
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:22504074) UniProt PMID:22504074 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:24958256) MGI PMID:24958256 NCBI chrNW_004955507:3,562,513...3,571,400
Ensembl chrNW_004955507:3,562,513...3,571,400
JBrowse link
G Pgam2 phosphoglycerate mutase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chrNW_004955456:7,909,891...7,912,116
Ensembl chrNW_004955456:7,909,891...7,912,116
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:19643083) RGD
MGI
PMID:3091090 PMID:15720133 PMID:19643083 RGD:2302795 RGD:2302860 NCBI chrNW_004955557:1,566,534...1,584,799 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:15232616) MGI PMID:15232616 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (PMID:15716268)
(PMID:16753578), (PMID:23142079)
RGD
UniProt
PMID:15716268 PMID:16753578 PMID:21212096 PMID:23142079 RGD:9585757 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ppp4r3a protein phosphatase 4 regulatory subunit 3A acts_upstream_of ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004955438:13,731,900...13,769,189
Ensembl chrNW_004955438:13,729,949...13,769,189
JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B acts_upstream_of ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004955424:27,461,919...27,520,649 JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (PMID:18466349)
(PMID:16034410)
BHF-UCL PMID:16034410 PMID:18466349 NCBI chrNW_004955507:112,342...120,050
Ensembl chrNW_004955507:108,669...120,584
JBrowse link
G Serpina12 serpin family A member 12 acts_upstream_of ISO (PMID:22837305) MGI PMID:22837305 NCBI chrNW_004955438:17,826,596...17,849,341
Ensembl chrNW_004955438:17,833,919...17,849,393
JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in ISO (PMID:35507647) MGI PMID:35507647 NCBI chrNW_004955467:10,349,378...10,352,649
Ensembl chrNW_004955467:10,349,378...10,355,368
JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:14701727) MGI PMID:14701727 NCBI chrNW_004955432:12,685,253...12,788,307
Ensembl chrNW_004955432:12,684,596...12,826,667
JBrowse link
G Slc37a4 solute carrier family 37 member 4 involved_in ISO (PMID:28973635) MGI PMID:28973635 NCBI chrNW_004955412:20,133,652...20,140,134
Ensembl chrNW_004955412:20,133,652...20,139,542
JBrowse link
G Slc39a14 solute carrier family 39 member 14 acts_upstream_of ISO (PMID:21445361) UniProt PMID:21445361 NCBI chrNW_004955403:45,828,247...45,867,309
Ensembl chrNW_004955403:45,827,942...45,867,309
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in ISO (PMID:31891762) MGI PMID:31891762 NCBI chrNW_004955413:4,467,615...4,471,594
Ensembl chrNW_004955413:4,467,566...4,471,177
JBrowse link
G Wdr5 WD repeat domain 5 acts_upstream_of ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955513:3,198,655...3,213,754
Ensembl chrNW_004955513:3,198,980...3,216,468
JBrowse link
glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in ISO (PMID:16899818), (PMID:22049910)
(PMID:22228304)
UniProt PMID:16899818 PMID:22049910 PMID:22228304 NCBI chrNW_004955403:8,195,241...8,261,402
Ensembl chrNW_004955403:8,195,255...8,261,402
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875) BHF-UCL PMID:11032875 NCBI chrNW_004955510:5,987,811...6,021,001 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004955449:3,093,603...3,182,513
Ensembl chrNW_004955449:3,093,603...3,186,737
JBrowse link
glutamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glul glutamate-ammonia ligase ISO RGD PMID:28323 PMID:4403443 RGD:2301547 RGD:2301548 NCBI chrNW_004955406:21,266,383...21,274,546
Ensembl chrNW_004955406:21,266,383...21,275,309
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
ISO PMID:17545671
(PMID:17545671)
UniProt
MGI
PMID:17545671 RGD:8553472 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Lep leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO (PMID:26755581) UniProt PMID:26755581 RGD:10679995 NCBI chrNW_004955442:15,051,149...15,053,123
Ensembl chrNW_004955442:15,051,183...15,052,289
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
ISO PMID:4186849
(PMID:11792850)
BHF-UCL
MGI
PMID:4186849 PMID:11792850 RGD:8553288 NCBI chrNW_004955445:1,909,012...1,914,032
Ensembl chrNW_004955445:1,908,946...1,915,002
JBrowse link
glycine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chrNW_004955478:10,972,791...11,001,535
Ensembl chrNW_004955478:10,978,139...11,001,202
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO from L-allothreonine in the absence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chrNW_004955458:4,957,614...4,962,691
Ensembl chrNW_004955458:4,957,602...4,962,691
JBrowse link
glycine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shmt1 serine hydroxymethyltransferase 1 ISO in the presence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chrNW_004955478:10,972,791...11,001,535
Ensembl chrNW_004955478:10,978,139...11,001,202
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO in the presence of tetrahydrofolate RGD PMID:3110140 RGD:2300383 NCBI chrNW_004955458:4,957,614...4,962,691
Ensembl chrNW_004955458:4,957,602...4,962,691
JBrowse link
glycine biosynthetic process, by transamination of glyoxylate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:22198249) RGD
UniProt
PMID:12383475 PMID:22198249 RGD:1599457 NCBI chrNW_004955542:710,506...720,564
Ensembl chrNW_004955542:710,005...717,741
JBrowse link
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) BHF-UCL PMID:20018850 NCBI chrNW_004955426:20,102,368...20,142,596
Ensembl chrNW_004955426:20,101,620...20,142,620
JBrowse link
glycolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22523093) ParkinsonsUK-UCL PMID:22523093 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chrNW_004955467:8,876,186...8,887,980
Ensembl chrNW_004955467:8,876,027...8,888,033
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO PMID:23382512 RGD
UniProt
PMID:15123652 PMID:23382512 RGD:5509794 RGD:8554649 NCBI chrNW_004955467:10,032,792...10,039,789 JBrowse link
G Alox15b arachidonate 15-lipoxygenase type B involved_in ISO PMID:23382512 UniProt PMID:23382512 RGD:8554649 NCBI chrNW_004955467:8,896,740...8,906,032
Ensembl chrNW_004955467:8,895,095...8,906,009
JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in ISO (PMID:12881489), (PMID:17045234)
(PMID:17045234)
(PMID:22832496)
PMID:23382512
UniProt PMID:12881489 PMID:17045234 PMID:22832496 PMID:23382512 RGD:8554649 NCBI chrNW_004955467:8,844,805...8,869,230
Ensembl chrNW_004955467:8,844,805...8,869,964
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (PMID:21046276) UniProt PMID:21046276 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428
JBrowse link
hexose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst15 carbohydrate sulfotransferase 15 involved_in ISO (PMID:11572857) UniProt PMID:11572857 NCBI chrNW_004955477:2,065,251...2,147,565
Ensembl chrNW_004955477:2,066,141...2,111,516
JBrowse link
hydroxylysine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 involved_in ISO (PMID:10934207) CAFA PMID:10934207 NCBI chrNW_004955474:11,392,163...11,473,918
Ensembl chrNW_004955474:11,392,163...11,475,508
JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in ISO (PMID:16447251) UniProt PMID:16447251 NCBI chrNW_004955456:16,082,424...16,090,773
Ensembl chrNW_004955456:16,082,437...16,093,389
JBrowse link
hypochlorous acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mpo myeloperoxidase acts_upstream_of_or_within ISO (PMID:10085024) MGI PMID:10085024 NCBI chrNW_004955451:4,743,744...4,753,358
Ensembl chrNW_004955451:4,743,744...4,753,358
JBrowse link
icosanoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g4a phospholipase A2 group IVA acts_upstream_of_or_within ISO (PMID:17293613) MGI PMID:17293613 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in
ISO (PMID:8894685)
(PMID:8672487)
(PMID:8663040)
(PMID:7731963), (PMID:9272950)
(PMID:10720488)
(PMID:1618849), (PMID:2015347), (PMID:7592575), (PMID:8663040), (PMID:8894685), (PMID:9272950)
MGI
UniProt
PMID:1618849 PMID:2015347 PMID:7592575 PMID:7731963 PMID:8663040 More... NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004955419:799,415...807,138
Ensembl chrNW_004955419:799,410...811,029
JBrowse link
inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO (PMID:23902760)
PMID:19188364
PMID:23504145
PMID:885873
PMID:6773943
UniProt PMID:885873 PMID:6773943 PMID:19188364 PMID:23504145 PMID:23902760 RGD:153298936 RGD:153298945 RGD:153298950 RGD:153298956 NCBI chrNW_004955524:3,099,017...3,100,454
Ensembl chrNW_004955524:3,098,995...3,100,454
JBrowse link
inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ip6k2 inositol hexakisphosphate kinase 2 involved_in ISO (PMID:24657168) MGI PMID:24657168 NCBI chrNW_004955532:766,577...794,461
Ensembl chrNW_004955532:766,577...794,409
JBrowse link
G Ip6k3 inositol hexakisphosphate kinase 3 acts_upstream_of_or_within ISO (PMID:11502751) MGI PMID:11502751 NCBI chrNW_004955437:2,128,337...2,150,714
Ensembl chrNW_004955437:2,125,222...2,149,242
JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (PMID:15939867) MGI PMID:15939867 NCBI chrNW_004955425:11,949,849...12,000,610
Ensembl chrNW_004955425:11,945,858...11,985,023
JBrowse link
inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcg1 phospholipase C gamma 1 ISO RGD PMID:16973916 RGD:2299886 NCBI chrNW_004955445:15,787,496...15,823,859
Ensembl chrNW_004955445:15,787,496...15,823,859
JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:9013981) MGI PMID:9013981 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
G Ptafr platelet activating factor receptor acts_upstream_of_or_within ISO (PMID:9013981) MGI PMID:9013981 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:12641450) UniProt PMID:12641450 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
ketone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt6 sirtuin 6 involved_in ISO (PMID:30530497) UniProt PMID:30530497 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
ketone body biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in ISO (PMID:22847177), (PMID:22865860), (PMID:9200711) RGD
UniProt
PMID:2573547 PMID:9200711 PMID:22847177 PMID:22865860 RGD:1599519 NCBI chrNW_004955452:3,720,103...3,734,730
Ensembl chrNW_004955452:3,720,103...3,735,192
JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in ISO (PMID:22847177), (PMID:22865860) UniProt PMID:22847177 PMID:22865860 NCBI chrNW_004955411:760,660...881,415
Ensembl chrNW_004955411:795,145...880,033
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO (PMID:23751782) RGD
UniProt
PMID:12399220 PMID:23751782 RGD:2326121 NCBI chrNW_004955435:22,804,484...22,820,807
Ensembl chrNW_004955435:22,804,484...22,821,482
JBrowse link
G Slc27a5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO (PMID:16618416) MGI PMID:16618416 NCBI chrNW_004955584:1,112,387...1,121,500
Ensembl chrNW_004955584:1,112,117...1,121,323
JBrowse link
kynurenic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (PMID:19234212) MGI PMID:19234212 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829
JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:15829251 RGD:13513901 NCBI chrNW_004955406:10,496,102...10,527,181
Ensembl chrNW_004955406:10,493,379...10,527,201
JBrowse link
L-arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase involved_in ISO (PMID:11747432), (PMID:11747433)
(PMID:22081021)
UniProt PMID:11747432 PMID:11747433 PMID:22081021 NCBI chrNW_004955456:8,409,767...8,419,915
Ensembl chrNW_004955456:8,411,220...8,416,992
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO PMID:19491403
(PMID:18473344), (PMID:27287393), (PMID:8792870)
RGD
UniProt
PMID:8792870 PMID:12470967 PMID:18473344 PMID:19491403 PMID:27287393 RGD:12859071 RGD:631755 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
L-ascorbic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISO PMID:22820017
(PMID:20410296)
(PMID:15769935)
UniProt
MGI
PMID:15769935 PMID:20410296 PMID:22820017 RGD:13825440 NCBI chrNW_004955464:12,715,238...12,729,034
Ensembl chrNW_004955464:12,714,717...12,729,662
JBrowse link
G Rgn regucalcin involved_in ISO (PMID:16585534)
(PMID:23349732)
MGI
UniProt
PMID:16585534 PMID:23349732 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910
JBrowse link
L-glutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:16489927 RGD:13504861 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:16489927 RGD:13504861 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113
JBrowse link
L-leucine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 ISO RGD PMID:11733007 RGD:1582175 NCBI chrNW_004955559:1,785,253...1,796,838
Ensembl chrNW_004955559:1,785,253...1,797,899
JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine--homocysteine S-methyltransferase involved_in ISO (PMID:18230605) BHF-UCL PMID:18230605 NCBI chrNW_004955425:21,992,219...22,009,389
Ensembl chrNW_004955425:21,991,665...22,009,855
JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 involved_in ISO (PMID:15938715) UniProt PMID:15938715 NCBI chrNW_004955487:3,816,428...3,822,663
Ensembl chrNW_004955487:3,816,428...3,822,663
JBrowse link
G Apip APAF1 interacting protein involved_in ISO (PMID:22837397), (PMID:23285211) UniProt PMID:22837397 PMID:23285211 NCBI chrNW_004955422:11,405,721...11,426,700
Ensembl chrNW_004955422:11,405,721...11,429,146
JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in ISO (PMID:15843022) UniProt PMID:15843022 NCBI chrNW_004955433:6,522,663...6,549,352
Ensembl chrNW_004955433:6,522,663...6,549,352
JBrowse link
L-proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in ISO (PMID:23024808), (PMID:28258219) UniProt PMID:23024808 PMID:28258219 NCBI chrNW_004955506:1,231,874...1,236,550
Ensembl chrNW_004955506:1,231,863...1,236,550
JBrowse link
G Pycr3 pyrroline-5-carboxylate reductase 3 involved_in ISO (PMID:23024808), (PMID:36414121) UniProt PMID:23024808 PMID:36414121 NCBI chrNW_004955454:2,305,485...2,311,280
Ensembl chrNW_004955454:2,305,485...2,311,280
JBrowse link
L-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psat1 phosphoserine aminotransferase 1 involved_in ISO (PMID:37627284) UniProt PMID:37627284 NCBI chrNW_004955512:1,132,452...1,155,405
Ensembl chrNW_004955512:1,132,390...1,155,412
JBrowse link
G Psph phosphoserine phosphatase involved_in ISO (PMID:14673469) UniProt PMID:14673469 NCBI chrNW_004955456:8,198,739...8,212,111
Ensembl chrNW_004955456:8,198,739...8,212,025
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:10457370 RGD:2300380 NCBI chrNW_004955458:4,957,614...4,962,691
Ensembl chrNW_004955458:4,957,602...4,962,691
JBrowse link
lactate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins insulin involved_in ISO (PMID:8069456) AgBase PMID:8069456 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:22523093) ParkinsonsUK-UCL PMID:22523093 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (PMID:23977055) UniProt PMID:23977055 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 ISO RGD PMID:16980436 RGD:2304071 NCBI chrNW_004955406:42,573,210...42,601,994
Ensembl chrNW_004955406:42,574,450...42,598,109
JBrowse link
lactate biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:17708681) MGI PMID:17708681 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G LOC102020557 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (PMID:18367675) MGI PMID:18367675 NCBI chrNW_004955414:33,109,535...33,138,756
Ensembl chrNW_004955414:33,110,120...33,138,756
JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISO (PMID:24282679)
(PMID:31642348)
(PMID:31664810)
UniProt PMID:24282679 PMID:31642348 PMID:31664810 NCBI chrNW_004955546:2,495,226...2,550,909
Ensembl chrNW_004955546:2,494,819...2,550,909
JBrowse link
leukotriene biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in
acts_upstream_of_or_within
ISO (PMID:21233389), (PMID:24893149)
(PMID:7809134)
(PMID:19075240)
UniProt
MGI
PMID:7809134 PMID:19075240 PMID:21233389 PMID:24893149 NCBI chrNW_004955546:2,495,226...2,550,909
Ensembl chrNW_004955546:2,494,819...2,550,909
JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein acts_upstream_of_or_within
involved_in
ISO (PMID:19075240)
(PMID:9091580)
(PMID:2300173)
RGD
MGI
UniProt
PMID:2300173 PMID:9091580 PMID:19075240 RGD:2313889 RGD:69749 NCBI chrNW_004955431:15,071,535...15,097,496
Ensembl chrNW_004955431:15,069,089...15,097,580
JBrowse link
G Camp cathelicidin antimicrobial peptide ISO RGD PMID:24990383 RGD:442380204 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Fcer1a Fc fragment of IgE receptor Ia acts_upstream_of_or_within ISO (PMID:9000133) MGI PMID:9000133 NCBI chrNW_004955468:11,094,792...11,101,191
Ensembl chrNW_004955468:11,094,788...11,101,173
JBrowse link
G Lta4h leukotriene A4 hydrolase involved_in ISO (PMID:11675384)
(PMID:15078870), (PMID:9774412)
CAFA
UniProt
PMID:9774412 PMID:11675384 PMID:15078870 NCBI chrNW_004955405:32,345,005...32,377,685
Ensembl chrNW_004955405:32,344,925...32,378,384
JBrowse link
G Ltc4s leukotriene C4 synthase ISO RGD PMID:14637132 RGD:2302289 NCBI chrNW_004955408:788,856...791,505 JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO (PMID:23409838), (PMID:8703034), (PMID:9092565) BHF-UCL PMID:8703034 PMID:9092565 PMID:23409838 NCBI chrNW_004955428:4,006,054...4,049,497
Ensembl chrNW_004955428:4,014,810...4,037,901
JBrowse link
G Mgst3 microsomal glutathione S-transferase 3 involved_in ISO (PMID:9278457) BHF-UCL PMID:9278457 NCBI chrNW_004955462:11,024,678...11,041,851
Ensembl chrNW_004955462:11,024,789...11,031,282
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:16005851) BHF-UCL PMID:16005851 NCBI chrNW_004955455:11,308,848...11,316,245
Ensembl chrNW_004955455:11,308,643...11,316,254
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (PMID:18451993)
(PMID:9403693)
UniProt PMID:9403693 PMID:18451993 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Pla2g5 phospholipase A2 group V involved_in ISO (PMID:20432503) RGD
UniProt
PMID:11106649 PMID:20432503 RGD:2303037 NCBI chrNW_004955452:662,281...721,507
Ensembl chrNW_004955452:710,271...723,142
JBrowse link
G Syk spleen associated tyrosine kinase acts_upstream_of_or_within ISO (PMID:9000133) MGI PMID:9000133 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581
JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:21447318)
(PMID:14754911)
BHF-UCL
UniProt
PMID:14754911 PMID:21447318 NCBI chrNW_004955455:8,082,578...8,099,523 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within
ISO (PMID:1676842), (PMID:21447318)
(PMID:9774450)
(PMID:12163373)
UniProt
MGI
PMID:1676842 PMID:9774450 PMID:12163373 PMID:21447318 NCBI chrNW_004955455:8,101,251...8,125,597
Ensembl chrNW_004955455:8,102,499...8,125,966
JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lias lipoic acid synthetase acts_upstream_of_or_within ISO (PMID:11389890) MGI PMID:11389890 NCBI chrNW_004955443:7,889,274...7,907,560
Ensembl chrNW_004955443:7,889,467...7,907,437
JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in ISO (PMID:15708862) UniProt PMID:15708862 NCBI chrNW_004955467:10,032,792...10,039,789 JBrowse link
G Alox15b arachidonate 15-lipoxygenase type B involved_in ISO (PMID:27145229) UniProt PMID:27145229 NCBI chrNW_004955467:8,896,740...8,906,032
Ensembl chrNW_004955467:8,895,095...8,906,009
JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 ISO RGD PMID:11381125 RGD:68727 NCBI chrNW_004955450:703,874...744,782
Ensembl chrNW_004955450:701,517...745,126
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO (PMID:20937905) UniProt PMID:20937905 NCBI chrNW_004955496:179,634...301,908
Ensembl chrNW_004955496:179,977...301,918
JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) MGI PMID:10601301 NCBI chrNW_004955511:5,908,394...5,915,764
Ensembl chrNW_004955511:5,907,726...5,915,764
JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in ISO (PMID:27791009) UniProt PMID:27791009 NCBI chrNW_004955435:13,064,691...13,069,734
Ensembl chrNW_004955435:13,063,966...13,210,264
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in ISO (PMID:27791009) UniProt PMID:27791009 NCBI chrNW_004955408:788,856...791,505 JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chrNW_004955409:2,409,503...2,530,539
Ensembl chrNW_004955409:2,428,815...2,530,012
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chrNW_004955548:781,522...797,246
Ensembl chrNW_004955548:781,015...797,935
JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727
JBrowse link
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004955486:6,188,102...6,258,230
Ensembl chrNW_004955486:6,188,102...6,259,110
JBrowse link
G Olah oleoyl-ACP hydrolase involved_in ISO (PMID:26663084)
PMID:8446599
UniProt PMID:8446599 PMID:26663084 RGD:13524614 NCBI chrNW_004955429:19,375,366...19,394,068
Ensembl chrNW_004955429:19,376,190...19,394,119
JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) HGNC-UCL PMID:15668256 NCBI chrNW_004955430:17,644,800...17,661,097
Ensembl chrNW_004955430:17,653,438...17,658,171
JBrowse link
menaquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubiad1 UbiA prenyltransferase domain containing 1 involved_in ISO (PMID:23169578) UniProt PMID:23169578 NCBI chrNW_004955486:2,472,035...2,481,975
Ensembl chrNW_004955486:2,472,035...2,481,975
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine--homocysteine S-methyltransferase acts_upstream_of_or_within ISO (PMID:15217352) RGD
MGI
PMID:15217352 PMID:15845641 RGD:1359026 NCBI chrNW_004955425:21,992,219...22,009,389
Ensembl chrNW_004955425:21,991,665...22,009,855
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:25633902) BHF-UCL PMID:25633902 NCBI chrNW_004955466:5,422,141...5,485,773
Ensembl chrNW_004955466:5,420,702...5,485,773
JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of_or_within ISO (PMID:15217352) MGI PMID:15217352 NCBI chrNW_004955486:2,096,379...2,112,240
Ensembl chrNW_004955486:2,096,379...2,112,240
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:23825108)
(PMID:11158293)
RGD
BHF-UCL
MGI
PMID:11158293 PMID:11730351 PMID:15845641 PMID:23825108 RGD:1359026 RGD:1601423 NCBI chrNW_004955492:3,372,915...3,474,173
Ensembl chrNW_004955492:3,376,512...3,474,180
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (PMID:17369066)
(PMID:11466310)
BHF-UCL PMID:11466310 PMID:17369066 NCBI chrNW_004955504:5,412,290...5,435,409
Ensembl chrNW_004955504:5,413,586...5,435,645
JBrowse link
monounsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scd5 stearoyl-CoA desaturase 5 acts_upstream_of_or_within ISO (PMID:16443825) MGI PMID:16443825 NCBI chrNW_004955433:6,700,616...6,819,782
Ensembl chrNW_004955433:6,700,555...6,818,147
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in ISO (PMID:14707127), (PMID:31121216)
(PMID:17549255)
(PMID:11929971)
FlyBase
MGI
UniProt
PMID:11929971 PMID:14707127 PMID:17549255 PMID:31121216 NCBI chrNW_004955472:56,623...92,553
Ensembl chrNW_004955472:45,926...97,082
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in ISO (PMID:16237198) UniProt PMID:16237198 RGD:8554804 NCBI chrNW_004955415:31,453,393...31,460,147
Ensembl chrNW_004955415:31,453,393...31,460,386
JBrowse link
G Nans N-acetylneuraminate synthase involved_in ISO (PMID:31121216) FlyBase PMID:31121216 NCBI chrNW_004955419:27,424,648...27,449,058
Ensembl chrNW_004955419:27,424,674...27,448,952
JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955411:450,674...557,213
Ensembl chrNW_004955411:450,674...558,650
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955414:27,466,636...27,507,186
Ensembl chrNW_004955414:27,456,770...27,508,109
JBrowse link
negative regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf19 fibroblast growth factor 19 involved_in
acts_upstream_of_or_within
ISO (PMID:12815072)
(PMID:23747249)
UniProt
MGI
PMID:12815072 PMID:23747249 NCBI chrNW_004955422:16,415,880...16,419,528
Ensembl chrNW_004955422:16,415,648...16,420,515
JBrowse link
G Malrd1 MAM and LDL receptor class A domain containing 1 acts_upstream_of_or_within ISO (PMID:23747249) MGI PMID:23747249 NCBI chrNW_004955429:8,634,713...9,235,666
Ensembl chrNW_004955429:8,634,944...9,235,688
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:16488887) BHF-UCL PMID:16488887 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:15947108) BHF-UCL PMID:15947108 NCBI chrNW_004955423:2,024,084...2,032,530
Ensembl chrNW_004955423:2,022,417...2,033,149
JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chrNW_004955458:5,472,404...5,477,001
Ensembl chrNW_004955458:5,472,404...5,477,001
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:15243130) BHF-UCL PMID:15243130 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885
JBrowse link
negative regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:1917954) RGD
BHF-UCL
PMID:1917954 PMID:9225228 RGD:10059686 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Chlsn cholesin involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004955460:8,714,109...8,839,162
Ensembl chrNW_004955460:8,712,187...8,839,187
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004955507:6,029,247...6,062,946
Ensembl chrNW_004955507:6,028,324...6,063,689
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004955463:13,445,468...13,460,370
Ensembl chrNW_004955463:13,444,722...13,463,132
JBrowse link
G Insig1 insulin induced gene 1 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004955491:8,333,624...8,344,658
Ensembl chrNW_004955491:8,335,359...8,344,658
JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955411:450,674...557,213
Ensembl chrNW_004955411:450,674...558,650
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955414:27,466,636...27,507,186
Ensembl chrNW_004955414:27,456,770...27,508,109
JBrowse link
negative regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chrNW_004955457:5,266,032...5,300,632
Ensembl chrNW_004955457:5,266,033...5,300,056
JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain involved_in ISO (PMID:15639194) BHF-UCL PMID:15639194 NCBI chrNW_004955467:9,684,070...9,689,454
Ensembl chrNW_004955467:9,684,250...9,689,356
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:15576844) BHF-UCL PMID:15576844 NCBI chrNW_004955555:2,005,962...2,007,239 JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO (PMID:11060345), (PMID:18635818) BHF-UCL PMID:11060345 PMID:18635818 NCBI chrNW_004955412:18,165,667...18,168,015
Ensembl chrNW_004955412:18,165,667...18,168,015
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:16326698) UniProt PMID:16326698 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO PMID:16054098 UniProt PMID:16054098 RGD:11059593 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004955507:6,029,247...6,062,946
Ensembl chrNW_004955507:6,028,324...6,063,689
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) UniProt PMID:24217618 NCBI chrNW_004955463:13,445,468...13,460,370
Ensembl chrNW_004955463:13,444,722...13,463,132
JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO (PMID:16100574) MGI PMID:16100574 NCBI chrNW_004955491:8,333,624...8,344,658
Ensembl chrNW_004955491:8,335,359...8,344,658
JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO (PMID:16100574) MGI PMID:16100574 NCBI chrNW_004955459:11,571,582...11,596,069
Ensembl chrNW_004955459:11,571,145...11,592,146
JBrowse link
G Klhl25 kelch like family member 25 involved_in ISO (PMID:27664236) UniProt PMID:27664236 NCBI chrNW_004955416:18,965,966...18,991,099 JBrowse link
G LOC102008593 cholesterol 7-alpha-monooxygenase involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004955454:17,035,105...17,078,854
Ensembl chrNW_004955454:17,036,204...17,042,756
JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in ISO (PMID:16794074) BHF-UCL PMID:16794074 NCBI chrNW_004955597:259,209...265,896
Ensembl chrNW_004955597:260,790...265,326
JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:23932781) UniProt PMID:23932781 NCBI chrNW_004955527:57,335...185,727
Ensembl chrNW_004955527:57,335...185,727
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 acts_upstream_of_or_within ISO (PMID:17767906) MGI PMID:17767906 NCBI chrNW_004955452:6,519,628...6,581,333
Ensembl chrNW_004955452:6,519,629...6,581,333
JBrowse link
negative regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing acts_upstream_of_or_within ISO (PMID:11479628) MGI PMID:11479628 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of_or_within ISO (PMID:22275362) MGI PMID:22275362 NCBI chrNW_004955486:9,541,466...9,545,231
Ensembl chrNW_004955486:9,541,367...9,547,097
JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in
acts_upstream_of_or_within
ISO (PMID:20952387) UniProt
MGI
PMID:20952387 NCBI chrNW_004955426:19,588,637...19,606,557
Ensembl chrNW_004955426:19,585,460...19,606,557
JBrowse link
G Clk2 CDC like kinase 2 involved_in ISO (PMID:20074525) UniProt PMID:20074525 NCBI chrNW_004955545:1,716,294...1,727,187
Ensembl chrNW_004955545:1,716,294...1,725,185
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:28790135), (PMID:29937374) UniProt PMID:28790135 PMID:29937374 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:30193097) UniProt PMID:30193097 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Gck glucokinase involved_in ISO (PMID:8878425) UniProt PMID:8878425 NCBI chrNW_004955456:7,784,269...7,838,260
Ensembl chrNW_004955456:7,783,760...7,842,129
JBrowse link
G Il6 interleukin 6 ISO In liver RGD PMID:16308834 RGD:2306940 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Ins insulin involved_in ISO (PMID:8069456) AgBase PMID:8069456 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:16753578), (PMID:23142079) UniProt PMID:16753578 PMID:23142079 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
JBrowse link
G Lepr leptin receptor acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
G Mst1 macrophage stimulating 1 involved_in ISO (PMID:19720831) UniProt PMID:19720831 NCBI chrNW_004955532:1,590,685...1,595,655
Ensembl chrNW_004955532:1,590,755...1,595,148
JBrowse link
G Mtcl2 microtubule crosslinking factor 2 involved_in ISO (PMID:20813965) UniProt PMID:20813965 NCBI chrNW_004955422:24,803,116...24,865,427
Ensembl chrNW_004955422:24,803,125...24,862,809
JBrowse link
G Pgp phosphoglycolate phosphatase involved_in ISO PMID:26755581
(PMID:26755581)
UniProt PMID:26755581 RGD:10679995 NCBI chrNW_004955442:15,051,149...15,053,123
Ensembl chrNW_004955442:15,051,183...15,052,289
JBrowse link
G Serpina12 serpin family A member 12 acts_upstream_of_or_within ISO (PMID:22837305) MGI PMID:22837305 NCBI chrNW_004955438:17,826,596...17,849,341
Ensembl chrNW_004955438:17,833,919...17,849,393
JBrowse link
G Sik1 salt inducible kinase 1 involved_in ISO (PMID:16148943) UniProt PMID:16148943 NCBI chrNW_004955407:38,739,062...38,749,293
Ensembl chrNW_004955407:38,739,062...38,749,758
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23142079), (PMID:25009184) UniProt PMID:23142079 PMID:25009184 NCBI chrNW_004955495:4,641,883...4,650,518
Ensembl chrNW_004955495:4,644,023...4,650,083
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO RGD PMID:21901280 RGD:152995490 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:28655758) UniProt PMID:28655758 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393
JBrowse link
negative regulation of inositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isyna1 inositol-3-phosphate synthase 1 involved_in ISO PMID:19188364 UniProt PMID:19188364 RGD:153298950 NCBI chrNW_004955524:3,099,017...3,100,454
Ensembl chrNW_004955524:3,098,995...3,100,454
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin involved_in ISO (PMID:7782310) BHF-UCL PMID:7782310 NCBI chrNW_004955424:16,494,052...16,524,790
Ensembl chrNW_004955424:16,493,960...16,524,998
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:7535379 RGD:7777104 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
negative regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prl prolactin involved_in ISO (PMID:24530842) AgBase PMID:24530842 NCBI chrNW_004955483:4,495,257...4,503,377 JBrowse link
negative regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:3863495) UniProt PMID:3863495 NCBI chrNW_004955404:33,713,903...33,897,622
Ensembl chrNW_004955404:33,714,193...33,897,622
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20042607) UniProt PMID:20042607 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase involved_in ISO (PMID:12140278) UniProt PMID:12140278 NCBI chrNW_004955440:2,348,434...2,412,706
Ensembl chrNW_004955440:2,348,396...2,412,706
JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prmt3 protein arginine methyltransferase 3 involved_in ISO (PMID:33495566) UniProt PMID:33495566 NCBI chrNW_004955476:1,222,579...1,331,582
Ensembl chrNW_004955476:1,223,076...1,331,582
JBrowse link
negative regulation of testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkkl1 dickkopf like acrosomal protein 1 involved_in ISO (PMID:18818293) UniProt PMID:18818293 NCBI chrNW_004955559:1,445,082...1,449,167
Ensembl chrNW_004955559:1,445,149...1,449,004
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:12949260) UniProt PMID:12949260 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:19502595) BHF-UCL PMID:19502595 NCBI chrNW_004955445:8,232,084...8,237,893
Ensembl chrNW_004955445:8,231,924...8,237,996
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:18485278), (PMID:19502595) BHF-UCL PMID:18485278 PMID:19502595 NCBI chrNW_004955454:8,759,860...8,763,603
Ensembl chrNW_004955454:8,758,636...8,764,427
JBrowse link
nucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in ISO (PMID:33833118) UniProt PMID:33833118 NCBI chrNW_004955403:25,825,366...25,849,511
Ensembl chrNW_004955403:25,825,672...25,850,862
JBrowse link
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (PMID:33833118) UniProt PMID:33833118 NCBI chrNW_004955437:9,145,737...9,147,388
Ensembl chrNW_004955437:9,145,737...9,147,387
JBrowse link
G Qng1 Q-nucleotide N-glycosylase 1 involved_in ISO (PMID:36610787) UniProt PMID:36610787 NCBI chrNW_004955432:3,273,161...3,284,261
Ensembl chrNW_004955432:3,273,161...3,288,035
JBrowse link
ornithine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chrNW_004955507:1,892,087...1,946,526
Ensembl chrNW_004955507:1,892,061...1,946,703
JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004955486:6,188,102...6,258,230
Ensembl chrNW_004955486:6,188,102...6,259,110
JBrowse link
pentose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase involved_in
acts_upstream_of_or_within
ISO (PMID:5643703)
(PMID:7439685), (PMID:8491670), (PMID:9330624), (PMID:9539108), (PMID:9627357)
(PMID:14757696), (PMID:15998684), (PMID:1953691)
BHF-UCL
MGI
PMID:1953691 PMID:5643703 PMID:7439685 PMID:8491670 PMID:9330624 More... NCBI chrNW_004955580:1,045,294...1,058,129
Ensembl chrNW_004955580:1,045,294...1,057,083
JBrowse link
G Pgd phosphogluconate dehydrogenase acts_upstream_of_or_within ISO (PMID:8491670) MGI PMID:8491670 NCBI chrNW_004955486:3,344,705...3,356,906
Ensembl chrNW_004955486:3,343,863...3,357,066
JBrowse link
phytosphingosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer3 alkaline ceramidase 3 involved_in ISO (PMID:11356846), (PMID:20068046) UniProt PMID:11356846 PMID:20068046 NCBI chrNW_004955414:14,741,027...14,846,931
Ensembl chrNW_004955414:14,746,529...14,848,151
JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:16527843) UniProt PMID:16527843 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
JBrowse link
G Dab2 DAB adaptor protein 2 ISO RGD PMID:17303656 RGD:7243836 NCBI chrNW_004955426:23,852,752...23,883,030 JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (PMID:18565334), (PMID:19721697) UniProt PMID:18565334 PMID:19721697 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Star steroidogenic acute regulatory protein involved_in ISO (PMID:18403318) BHF-UCL PMID:18403318 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Stard4 StAR related lipid transfer domain containing 4 involved_in ISO (PMID:18403318) BHF-UCL PMID:18403318 NCBI chrNW_004955418:3,637,390...3,652,054
Ensembl chrNW_004955418:3,638,399...3,648,402
JBrowse link
positive regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chrNW_004955407:39,410,262...39,459,383
Ensembl chrNW_004955407:39,410,262...39,459,383
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in ISO (PMID:17916878) BHF-UCL PMID:17916878 NCBI chrNW_004955412:20,256,467...20,270,172
Ensembl chrNW_004955412:20,256,293...20,271,278
JBrowse link
G Fdps farnesyl diphosphate synthase ISO RGD PMID:18637708 RGD:2316295 NCBI chrNW_004955545:1,757,090...1,765,028
Ensembl chrNW_004955545:1,757,418...1,765,028
JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in ISO (PMID:19229075) BHF-UCL PMID:19229075 NCBI chrNW_004955415:11,151,330...11,245,554
Ensembl chrNW_004955415:11,151,266...11,247,344
JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004955410:5,388,184...5,467,022
Ensembl chrNW_004955410:5,388,184...5,467,022
JBrowse link
G LOC102008593 cholesterol 7-alpha-monooxygenase involved_in ISO PMID:23536474 BHF-UCL PMID:23536474 RGD:13792517 NCBI chrNW_004955454:17,035,105...17,078,854
Ensembl chrNW_004955454:17,036,204...17,042,756
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 involved_in ISO (PMID:11163209) UniProt PMID:11163209 NCBI chrNW_004955509:2,185,054...2,222,497
Ensembl chrNW_004955509:2,184,522...2,222,505
JBrowse link
G Npy1r neuropeptide Y receptor Y1 ISO RGD PMID:32976883 RGD:405096663 NCBI chrNW_004955403:41,681,834...41,693,094
Ensembl chrNW_004955403:41,681,728...41,694,020
JBrowse link
G Paqr3 progestin and adipoQ receptor family member 3 involved_in ISO (PMID:26311497) UniProt PMID:26311497 NCBI chrNW_004955433:3,323,426...3,350,358
Ensembl chrNW_004955433:3,321,625...3,350,588
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930
JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (PMID:33942715) UniProt PMID:33942715 NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727
JBrowse link
G Scap SREBF chaperone involved_in ISO (PMID:32322062) UniProt PMID:32322062 NCBI chrNW_004955420:24,813,683...24,869,602
Ensembl chrNW_004955420:24,813,534...24,869,480
JBrowse link
G Scp2 sterol carrier protein 2 ISO RGD PMID:2554812 RGD:9850260 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
G Sec14l2 SEC14 like lipid binding 2 ISO RGD PMID:11226224 RGD:727312 NCBI chrNW_004955455:4,637,062...4,660,064
Ensembl chrNW_004955455:4,636,709...4,660,058
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:12177166), (PMID:32322062)
(PMID:8833906), (PMID:9062341)
(PMID:16046411)
(PMID:9329978)
UniProt
MGI
PMID:8833906 PMID:9062341 PMID:9329978 PMID:12177166 PMID:16046411 More... NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:12177166), (PMID:32322062), (PMID:38503280)
(PMID:33942715), (PMID:34021134)
UniProt PMID:12177166 PMID:32322062 PMID:33942715 PMID:34021134 PMID:38503280 NCBI chrNW_004955413:27,271,717...27,326,655
Ensembl chrNW_004955413:27,271,953...27,326,759
JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (PMID:11606482) MGI PMID:11606482 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO (PMID:2307668) BHF-UCL PMID:2307668 NCBI chrNW_004955412:18,158,095...18,160,636
Ensembl chrNW_004955412:18,155,801...18,160,701
JBrowse link
G Apoa5 apolipoprotein A5 involved_in ISO (PMID:18635818) BHF-UCL PMID:18635818 NCBI chrNW_004955412:18,128,861...18,131,752
Ensembl chrNW_004955412:18,129,603...18,131,115
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:10727238) BHF-UCL PMID:10727238 NCBI chrNW_004955555:2,019,547...2,021,543
Ensembl chrNW_004955555:2,016,217...2,021,830
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in ISO (PMID:23749231) BHF-UCL PMID:23749231 NCBI chrNW_004955411:2,747,232...2,812,544
Ensembl chrNW_004955411:2,747,232...2,812,544
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:16800817 RGD:1624995 NCBI chrNW_004955445:12,925,248...12,962,501
Ensembl chrNW_004955445:12,924,662...12,984,281
JBrowse link
G Ins insulin involved_in ISO (PMID:14677856) CACAO PMID:14677856 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:23932781) UniProt PMID:23932781 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
JBrowse link
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 involved_in ISO (PMID:23749231) BHF-UCL PMID:23749231 NCBI chrNW_004955406:5,441,923...5,506,575
Ensembl chrNW_004955406:5,441,316...5,522,546
JBrowse link
G Mid1ip1 MID1 interacting protein 1 involved_in ISO (PMID:20457939) UniProt PMID:20457939 NCBI chrNW_004955566:287,578...289,803
Ensembl chrNW_004955566:287,578...289,803
JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (PMID:15118080) BHF-UCL PMID:15118080 NCBI chrNW_004955456:14,096,530...14,116,687
Ensembl chrNW_004955456:14,096,531...14,117,269
JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 involved_in ISO (PMID:17186944) BHF-UCL PMID:17186944 NCBI chrNW_004955559:731,630...736,973
Ensembl chrNW_004955559:730,670...737,505
JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:17186944) BHF-UCL PMID:17186944 NCBI chrNW_004955422:940,310...954,170
Ensembl chrNW_004955422:940,310...949,049
JBrowse link
G Rgn regucalcin ISO RGD PMID:16817230 RGD:9590221 NCBI chrNW_004955516:958,416...978,829
Ensembl chrNW_004955516:955,680...978,910
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:23932781) UniProt PMID:23932781 NCBI chrNW_004955468:626,365...644,441
Ensembl chrNW_004955468:626,365...644,441
JBrowse link
G Slc45a3 solute carrier family 45 member 3 involved_in ISO (PMID:22521588) ParkinsonsUK-UCL PMID:22521588 NCBI chrNW_004955406:41,362,077...41,381,981
Ensembl chrNW_004955406:41,360,380...41,382,115
JBrowse link
positive regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpp19 cAMP regulated phosphoprotein 19 involved_in ISO (PMID:9653196) UniProt PMID:9653196 NCBI chrNW_004955409:2,354,988...2,369,846
Ensembl chrNW_004955409:2,354,988...2,369,846
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:29937374) DisProt PMID:29937374 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:28790135) UniProt PMID:28790135 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:17526931 RGD:10400884 NCBI chrNW_004955414:16,059,781...16,089,727
Ensembl chrNW_004955414:16,059,781...16,089,727
JBrowse link
G Foxo1 forkhead box O1 involved_in
acts_upstream_of_or_within
ISO (PMID:17024043), (PMID:25009184)
(PMID:12783775)
UniProt
MGI
PMID:12783775 PMID:17024043 PMID:25009184 NCBI chrNW_004955431:5,797,359...5,890,758 JBrowse link
G Gcg glucagon acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955449:11,708,152...11,716,429
Ensembl chrNW_004955449:11,708,152...11,716,429
JBrowse link
G Gpt glutamic--pyruvic transaminase ISO RGD PMID:25865565 RGD:11342811 NCBI chrNW_004955454:3,127,997...3,132,459
Ensembl chrNW_004955454:3,127,997...3,132,459
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:16893891 PMID:24177414 RGD:10445837 RGD:1624992 NCBI chrNW_004955445:12,925,248...12,962,501
Ensembl chrNW_004955445:12,924,662...12,984,281
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
JBrowse link
G Nnmt nicotinamide N-methyltransferase involved_in ISO (PMID:26168293) UniProt PMID:26168293 NCBI chrNW_004955412:15,892,906...15,916,166 JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:34270714 RGD:401831046 NCBI chrNW_004955439:7,870,563...7,923,817
Ensembl chrNW_004955439:7,757,569...7,923,817
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:15232616) MGI PMID:15232616 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppp4r3a protein phosphatase 4 regulatory subunit 3A acts_upstream_of_or_within ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004955438:13,731,900...13,769,189
Ensembl chrNW_004955438:13,729,949...13,769,189
JBrowse link
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B acts_upstream_of_or_within ISO (PMID:20876121) MGI PMID:20876121 NCBI chrNW_004955424:27,461,919...27,520,649 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO (PMID:23292513) MGI PMID:23292513 NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930
JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (PMID:20484139) UniProt PMID:20484139 NCBI chrNW_004955402:771,410...846,671 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:26168293)
(PMID:15692560), (PMID:23142079), (PMID:30193097)
RGD
UniProt
PMID:15692560 PMID:21212096 PMID:23142079 PMID:26168293 PMID:30193097 RGD:9585757 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:28655758) UniProt PMID:28655758 NCBI chrNW_004955506:1,252,271...1,258,728
Ensembl chrNW_004955506:1,252,274...1,258,728
JBrowse link
G Stk11 serine/threonine kinase 11 ISO RGD PMID:17083919 RGD:2291956 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Supt20h SPT20 homolog, SAGA complex component acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955431:9,013,325...9,050,844
Ensembl chrNW_004955431:9,014,726...9,050,844
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:23260145) MGI PMID:23260145 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Wdr5 WD repeat domain 5 acts_upstream_of_or_within ISO (PMID:24051374) MGI PMID:24051374 NCBI chrNW_004955513:3,198,655...3,213,754
Ensembl chrNW_004955513:3,198,980...3,216,468
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I ISO RGD PMID:8396727 PMID:8943280 RGD:2315982 RGD:631732 NCBI chrNW_004955410:32,176,683...32,229,187
Ensembl chrNW_004955410:32,176,536...32,229,431
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:9322919) ARUK-UCL PMID:9322919 NCBI chrNW_004955406:41,706,088...41,716,173
Ensembl chrNW_004955406:41,705,305...41,716,173
JBrowse link
G Cd244 CD244 molecule involved_in ISO (PMID:8376943) UniProt PMID:8376943 NCBI chrNW_004955468:12,532,937...12,559,859
Ensembl chrNW_004955468:12,534,064...12,559,434
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:1332507 RGD:2316794 NCBI chrNW_004955439:20,956,862...20,957,839
Ensembl chrNW_004955439:20,956,862...20,957,839
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:11861328 RGD:9743897 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
G Ptafr platelet activating factor receptor ISO RGD PMID:8798508 RGD:9999203 NCBI chrNW_004955452:7,309,854...7,345,579
Ensembl chrNW_004955452:7,311,901...7,312,929
JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:11604398) CAFA PMID:11604398 NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in ISO PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chrNW_004955420:25,274,269...25,291,984
Ensembl chrNW_004955420:25,273,431...25,296,471
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:15641770) UniProt PMID:15641770 NCBI chrNW_004955405:854,011...962,741
Ensembl chrNW_004955405:853,946...965,403
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:15705806) UniProt PMID:15705806 NCBI chrNW_004955460:8,790,798...8,794,902
Ensembl chrNW_004955460:8,790,798...8,794,902
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor involved_in ISO (PMID:10493819) BHF-UCL PMID:10493819 NCBI chrNW_004955441:15,205,883...15,263,617
Ensembl chrNW_004955441:15,207,252...15,242,914
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chrNW_004955448:4,366,706...4,372,626
Ensembl chrNW_004955448:4,366,706...4,372,626
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 involved_in ISO (PMID:8670200) ARUK-UCL PMID:8670200 NCBI chrNW_004955414:18,177,406...18,215,428
Ensembl chrNW_004955414:18,177,406...18,215,428
JBrowse link
G Plcd1 phospholipase C delta 1 ISO RGD PMID:16709602 RGD:2300424 NCBI chrNW_004955421:4,856,366...4,880,309
Ensembl chrNW_004955421:4,856,366...4,880,309
JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:11371619) MGI PMID:11371619 NCBI chrNW_004955407:5,996,016...6,011,483
Ensembl chrNW_004955407:5,996,016...6,011,483
JBrowse link
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase acts_upstream_of ISO (PMID:16731528) ParkinsonsUK-UCL PMID:16731528 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885
JBrowse link
positive regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:20133449 RGD:10059648 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
positive regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO RGD PMID:8260938 RGD:2306959 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:17254553 RGD:2300349 NCBI chrNW_004955458:10,245,325...10,253,209
Ensembl chrNW_004955458:10,245,111...10,253,209
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24569872) ARUK-UCL PMID:24569872 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:29384235) ARUK-UCL PMID:29384235 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:9786861 RGD:2304243 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Pla2g3 phospholipase A2 group III involved_in ISO (PMID:23624557) UniProt PMID:23624557 NCBI chrNW_004955455:5,314,520...5,320,151
Ensembl chrNW_004955455:5,315,450...5,320,053
JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:16203828 RGD:1642461 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:24287039) AgBase PMID:24287039 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:21716255) CAFA PMID:21716255 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171
JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004955444:6,878,722...6,909,421
Ensembl chrNW_004955444:6,878,722...6,909,421
JBrowse link
positive regulation of ubiquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pptc7 protein phosphatase targeting COQ7 involved_in ISO (PMID:30267671) UniProt PMID:30267671 NCBI chrNW_004955482:7,445,218...7,484,939
Ensembl chrNW_004955482:7,445,218...7,484,952
JBrowse link
positive regulation of unsaturated fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18854420) UniProt PMID:18854420 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:18854420) UniProt PMID:18854420 NCBI chrNW_004955505:717,800...769,702
Ensembl chrNW_004955505:721,222...798,470
JBrowse link
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in ISO (PMID:9282826) BHF-UCL PMID:9282826 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:1690216) BHF-UCL PMID:1690216 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:1703300) UniProt PMID:1703300 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
G Stard3 StAR related lipid transfer domain containing 3 acts_upstream_of_or_within ISO (PMID:14963026) MGI PMID:14963026 NCBI chrNW_004955451:14,395,088...14,412,041
Ensembl chrNW_004955451:14,394,466...14,413,810
JBrowse link
proline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family member A1 involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chrNW_004955507:1,892,087...1,946,526
Ensembl chrNW_004955507:1,892,061...1,946,703
JBrowse link
G Pycr1 pyrroline-5-carboxylate reductase 1 involved_in ISO (PMID:16730026) UniProt PMID:16730026 NCBI chrNW_004955506:1,231,874...1,236,550
Ensembl chrNW_004955506:1,231,863...1,236,550
JBrowse link
G Pycr2 pyrroline-5-carboxylate reductase 2 involved_in ISO (PMID:23024808) UniProt PMID:23024808 NCBI chrNW_004955489:138,600...143,112
Ensembl chrNW_004955489:138,600...143,112
JBrowse link
propionate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004955415:31,117,542...31,154,654
Ensembl chrNW_004955415:31,117,303...31,154,654
JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004955422:26,450,899...26,500,336
Ensembl chrNW_004955422:26,451,598...26,500,546
JBrowse link
prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd74 CD74 molecule involved_in ISO (PMID:12782713) UniProt PMID:12782713 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Daglb diacylglycerol lipase beta involved_in ISO (PMID:23103940) UniProt PMID:23103940 NCBI chrNW_004955460:13,226,574...13,268,060
Ensembl chrNW_004955460:13,226,693...13,267,449
JBrowse link
G Edn1 endothelin 1 involved_in ISO (PMID:9492062) BHF-UCL PMID:9492062 NCBI chrNW_004955465:2,287,906...2,314,945
Ensembl chrNW_004955465:2,287,798...2,314,753
JBrowse link
G Edn2 endothelin 2 involved_in ISO (PMID:9492062) BHF-UCL PMID:9492062 NCBI chrNW_004955537:1,228,062...1,233,784
Ensembl chrNW_004955537:1,228,070...1,233,797
JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:12782713) UniProt PMID:12782713 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460
JBrowse link
G Pla2g10 phospholipase A2 group X involved_in ISO (PMID:27292189) UniProt PMID:27292189 NCBI chrNW_004955442:4,208,497...4,225,893
Ensembl chrNW_004955442:4,208,575...4,225,834
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (PMID:18451993)
(PMID:9403692), (PMID:9403693)
(PMID:27642067)
UniProt PMID:9403692 PMID:9403693 PMID:18451993 PMID:27642067 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Pla2g4f phospholipase A2 group IVF acts_upstream_of_or_within ISO (PMID:17293613) MGI PMID:17293613 NCBI chrNW_004955416:8,876,560...8,889,764
Ensembl chrNW_004955416:8,873,356...8,889,940
JBrowse link
G Pnpla8 patatin like phospholipase domain containing 8 involved_in ISO (PMID:15695510) UniProt PMID:15695510 NCBI chrNW_004955410:12,715,072...12,753,433
Ensembl chrNW_004955410:12,711,082...12,753,433
JBrowse link
G Prxl2b peroxiredoxin like 2B involved_in ISO (PMID:18006499) UniProt PMID:18006499 NCBI chrNW_004955486:8,663,708...8,666,369
Ensembl chrNW_004955486:8,663,595...8,666,469
JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISO PMID:7836410
(PMID:17715133)
(PMID:20347284), (PMID:20667974)
UniProt PMID:7836410 PMID:17715133 PMID:20347284 PMID:20667974 RGD:8553429 NCBI chrNW_004955513:5,009,530...5,012,781
Ensembl chrNW_004955513:5,009,625...5,012,781
JBrowse link
G Ptges prostaglandin E synthase involved_in ISO (PMID:11795891)
(PMID:25726376)
(PMID:18682561)
RGD
UniProt
AgBase
PMID:11067848 PMID:11795891 PMID:18682561 PMID:25726376 RGD:67929 NCBI chrNW_004955445:10,053,745...10,056,981 JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within
involved_in
ISO (PMID:17438133)
(PMID:10922363)
RGD
MGI
UniProt
PMID:10922363 PMID:17438133 RGD:5688071 NCBI chrNW_004955458:4,203,075...4,209,967
Ensembl chrNW_004955458:4,203,076...4,209,910
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISO (PMID:15115769), (PMID:20122998), (PMID:21296955) UniProt
RGD
PMID:10359560 PMID:10536678 PMID:15115769 PMID:15684702 PMID:16094316 More... RGD:1580695 RGD:401959739 RGD:727270 RGD:8693629 NCBI chrNW_004955445:8,624,228...8,663,385
Ensembl chrNW_004955445:8,623,430...8,677,658
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 acts_upstream_of_or_within ISO (PMID:12093889) RGD
MGI
PMID:12093889 PMID:17673564 RGD:2300259 NCBI chrNW_004955419:5,678,750...5,699,305
Ensembl chrNW_004955419:5,678,694...5,699,305
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:12925531)
(PMID:27642067)
RGD
UniProt
PMID:12925531 PMID:17673564 PMID:27642067 RGD:2300259 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171
JBrowse link
G Tbxas1 thromboxane A synthase 1 involved_in ISO (PMID:11097184) UniProt PMID:11097184 NCBI chrNW_004955494:3,161,032...3,321,974
Ensembl chrNW_004955494:3,160,653...3,334,411
JBrowse link
purine ribonucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO (PMID:14736855) MGI PMID:14736855 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
G Aprt adenine phosphoribosyltransferase acts_upstream_of_or_within ISO (PMID:8485579) MGI PMID:8485579 NCBI chrNW_004955541:2,687,938...2,690,906
Ensembl chrNW_004955541:2,687,938...2,690,906
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:9824441)
(PMID:8485579)
(PMID:10037486), (PMID:12944494), (PMID:8485579), (PMID:8492116)
UniProt
MGI
PMID:8485579 PMID:8492116 PMID:9824441 PMID:10037486 PMID:12944494 NCBI chrNW_004955473:462,940...510,006 JBrowse link
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxk pyridoxal kinase ISO RGD PMID:2988502 RGD:2303018 NCBI chrNW_004955407:41,482,216...41,494,174
Ensembl chrNW_004955407:41,482,216...41,494,177
JBrowse link
G Pnpo pyridoxamine 5'-phosphate oxidase involved_in ISO (PMID:12824491) CAFA PMID:12824491 NCBI chrNW_004955451:13,184,861...13,190,933
Ensembl chrNW_004955451:13,183,826...13,191,707
JBrowse link
pyruvate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ISO RGD PMID:12383475 RGD:1599457 NCBI chrNW_004955542:710,506...720,564
Ensembl chrNW_004955542:710,005...717,741
JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chrNW_004955507:3,687,449...3,711,939
Ensembl chrNW_004955507:3,687,769...3,711,151
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:19635791 RGD:7242950 NCBI chrNW_004955409:36,288,402...36,296,761
Ensembl chrNW_004955409:36,288,568...36,296,828
JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 ISO RGD PMID:16980436 RGD:2304071 NCBI chrNW_004955406:42,573,210...42,601,994
Ensembl chrNW_004955406:42,574,450...42,598,109
JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chrNW_004955545:1,742,432...1,749,632
Ensembl chrNW_004955545:1,739,152...1,749,632
JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:4273555 PMID:10734049 RGD:151708737 RGD:2302790 NCBI chrNW_004955450:4,907,962...4,935,179
Ensembl chrNW_004955450:4,907,788...4,936,199
JBrowse link
G Sds serine dehydratase involved_in ISO (PMID:15689518) UniProt PMID:15689518 NCBI chrNW_004955482:9,646,523...9,653,471
Ensembl chrNW_004955482:9,643,919...9,653,375
JBrowse link
G Srr serine racemase involved_in ISO (PMID:18812225) UniProt PMID:18812225 NCBI chrNW_004955481:919,692...940,066
Ensembl chrNW_004955481:871,654...937,770
JBrowse link
quinolinate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO (PMID:28792876) UniProt PMID:28792876 NCBI chrNW_004955441:10,114,863...10,128,948
Ensembl chrNW_004955441:10,110,380...10,129,015
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:16697652) MGI PMID:16697652 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in ISO (PMID:2419335) UniProt PMID:2419335 NCBI chrNW_004955536:2,944,770...2,955,829
Ensembl chrNW_004955536:2,943,611...2,955,829
JBrowse link
G Kynu kynureninase involved_in ISO (PMID:9291104) UniProt PMID:9291104 NCBI chrNW_004955440:9,420,141...9,536,767
Ensembl chrNW_004955440:9,420,009...9,536,761
JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 involved_in ISO (PMID:29403011) UniProt PMID:29403011 NCBI chrNW_004955420:23,138,558...23,152,462
Ensembl chrNW_004955420:23,138,605...23,152,311
JBrowse link
regulation of arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:19284480) UniProt PMID:19284480 NCBI chrNW_004955493:6,696,520...6,707,849
Ensembl chrNW_004955493:6,696,241...6,707,849
JBrowse link
regulation of bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO (PMID:17623664), (PMID:20683963)
(PMID:10809780)
UniProt PMID:10809780 PMID:17623664 PMID:20683963 NCBI chrNW_004955408:29,370,480...29,383,531
Ensembl chrNW_004955408:29,370,468...29,383,971
JBrowse link
G LOC102008593 cholesterol 7-alpha-monooxygenase involved_in ISO (PMID:19965590)
PMID:1694852
UniProt PMID:1694852 PMID:19965590 RGD:70534 NCBI chrNW_004955454:17,035,105...17,078,854
Ensembl chrNW_004955454:17,036,204...17,042,756
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20375098) UniProt PMID:20375098 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
regulation of cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 NOT|involved_in ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO (PMID:16455790) MGI PMID:16455790 NCBI chrNW_004955469:3,437,422...3,478,408
Ensembl chrNW_004955469:3,436,450...3,478,424
JBrowse link
G Aqp8 aquaporin 8 involved_in ISO (PMID:30579780) UniProt PMID:30579780 NCBI chrNW_004955493:3,550,697...3,558,875
Ensembl chrNW_004955493:3,550,120...3,559,206
JBrowse link
G Dhcr7 7-dehydrocholesterol reductase ISO RGD PMID:10329655 RGD:632010 NCBI chrNW_004955422:15,119,155...15,136,771
Ensembl chrNW_004955422:15,119,173...15,136,771
JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in ISO (PMID:24217618) ComplexPortal PMID:24217618 NCBI chrNW_004955507:6,029,247...6,062,946
Ensembl chrNW_004955507:6,028,324...6,063,689
JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in ISO (PMID:24217618) ComplexPortal PMID:24217618 NCBI chrNW_004955463:13,445,468...13,460,370
Ensembl chrNW_004955463:13,444,722...13,463,132
JBrowse link
G Gpr146 G protein-coupled receptor 146 involved_in ISO (PMID:38503280) UniProt PMID:38503280 NCBI chrNW_004955460:8,747,499...8,762,141
Ensembl chrNW_004955460:8,759,661...8,760,704
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISO (PMID:29395055) UniProt PMID:29395055 NCBI chrNW_004955413:4,571,028...4,605,097
Ensembl chrNW_004955413:4,571,028...4,605,097
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (PMID:14673138) MGI PMID:14673138 NCBI chrNW_004955444:3,811,972...3,830,666
Ensembl chrNW_004955444:3,811,973...3,830,666
JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO (PMID:16054043) MGI PMID:16054043 NCBI chrNW_004955420:24,813,683...24,869,602
Ensembl chrNW_004955420:24,813,534...24,869,480
JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase involved_in ISO (PMID:18628520), (PMID:23132696)
(PMID:16356929)
UniProt PMID:16356929 PMID:18628520 PMID:23132696 NCBI chrNW_004955486:4,088,354...4,115,077
Ensembl chrNW_004955486:4,022,306...4,115,077
JBrowse link
regulation of fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO (PMID:26383020) UniProt PMID:26383020 NCBI chrNW_004956210:226...6,819
Ensembl chrNW_004956210:21...9,816
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO (PMID:21852536)
(PMID:19627255)
UniProt PMID:19627255 PMID:21852536 NCBI chrNW_004955432:12,169,548...12,182,064
Ensembl chrNW_004955432:12,169,435...12,182,409
JBrowse link
G Scap SREBF chaperone acts_upstream_of_or_within ISO (PMID:16054043) MGI PMID:16054043 NCBI chrNW_004955420:24,813,683...24,869,602
Ensembl chrNW_004955420:24,813,534...24,869,480
JBrowse link
regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:18459129) BHF-UCL PMID:18459129 NCBI chrNW_004955423:17,173,648...17,199,189
Ensembl chrNW_004955423:17,172,779...17,199,090
JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (PMID:29937374) DisProt PMID:29937374 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:23767959) ParkinsonsUK-UCL PMID:23767959 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO (PMID:7558035) UniProt PMID:7558035 NCBI chrNW_004955422:21,537,337...21,569,174
Ensembl chrNW_004955422:21,536,667...21,569,433
JBrowse link
G Foxo1 forkhead box O1 acts_upstream_of_or_within ISO (PMID:18497885) MGI PMID:18497885 NCBI chrNW_004955431:5,797,359...5,890,758 JBrowse link
G Gnmt glycine N-methyltransferase acts_upstream_of_or_within ISO (PMID:17937387) MGI PMID:17937387 NCBI chrNW_004955437:8,944,288...8,946,642
Ensembl chrNW_004955437:8,944,047...8,946,642
JBrowse link
G Insr insulin receptor ISO RGD PMID:29896241 RGD:14700925 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (PMID:16513828) MGI PMID:16513828 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Nln neurolysin acts_upstream_of_or_within ISO (PMID:24719317) MGI PMID:24719317 NCBI chrNW_004955446:3,258,278...3,374,337
Ensembl chrNW_004955446:3,256,078...3,374,462
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 acts_upstream_of_or_within ISO (PMID:7628695) MGI PMID:7628695 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:23395176) UniProt PMID:23395176 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO (PMID:22360721) UniProt PMID:22360721 NCBI chrNW_004955451:11,547,660...11,559,266
Ensembl chrNW_004955451:11,547,660...11,559,403
JBrowse link
G Ranbp2 RAN binding protein 2 acts_upstream_of_or_within ISO (PMID:17069463) MGI PMID:17069463 NCBI chrNW_004955470:12,180,426...12,247,737
Ensembl chrNW_004955470:12,180,544...12,249,555
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO (PMID:22958918) MGI PMID:22958918 NCBI chrNW_004955452:7,392,644...7,417,204
Ensembl chrNW_004955452:7,393,007...7,417,304
JBrowse link
G Slc35b4 solute carrier family 35 member B4 acts_upstream_of_or_within ISO (PMID:21507882) MGI PMID:21507882 NCBI chrNW_004955410:33,695,985...33,728,749
Ensembl chrNW_004955410:33,695,499...33,723,694
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:23028378) MGI PMID:23028378 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Znf692 zinc finger protein 692 involved_in ISO (PMID:21910974) UniProt PMID:21910974 NCBI chrNW_004955418:29,910,084...29,915,013
Ensembl chrNW_004955418:29,910,252...29,915,013
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 ISO RGD PMID:20705669 RGD:5509896 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:20705669 RGD:5509896 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:12869647 RGD:596992334 NCBI chrNW_004955528:1,348,616...1,394,798
Ensembl chrNW_004955528:1,348,555...1,394,868
JBrowse link
regulation of ketone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt5 sirtuin 5 involved_in ISO (PMID:24315375) UniProt PMID:24315375 NCBI chrNW_004955465:1,129,217...1,167,604
Ensembl chrNW_004955465:1,129,217...1,167,604
JBrowse link
regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G Egr1 early growth response 1 involved_in ISO (PMID:8703054) UniProt PMID:8703054 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
regulation of prostaglandin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp5 fatty acid binding protein 5 involved_in ISO (PMID:29440395) UniProt PMID:29440395 NCBI chrNW_004955444:325,515...329,248
Ensembl chrNW_004955444:325,515...331,516
JBrowse link
regulation of testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bglap bone gamma-carboxyglutamate protein involved_in ISO (PMID:21333348) UniProt PMID:21333348 NCBI chrNW_004955545:2,381,091...2,382,114
Ensembl chrNW_004955545:2,381,156...2,381,978
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO (PMID:21333348) UniProt PMID:21333348 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Gprc6a G protein-coupled receptor class C group 6 member A involved_in ISO (PMID:21333348) UniProt PMID:21333348 NCBI chrNW_004955436:137,809...159,481
Ensembl chrNW_004955436:137,809...159,481
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:22429315 RGD:7775068 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
regulation of ubiquinone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adck2 aarF domain containing kinase 2 involved_in ISO (PMID:31480808) UniProt PMID:31480808 NCBI chrNW_004955494:2,736,466...2,745,491
Ensembl chrNW_004955494:2,734,987...2,745,491
JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in ISO (PMID:33565183)
(PMID:29240402)
RGD
UniProt
PMID:15950969 PMID:21138835 PMID:29240402 PMID:33565183 RGD:6771322 RGD:6771354 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within
ISO (PMID:14623956)
(PMID:11013254), (PMID:11044606), (PMID:16241904)
(PMID:27759097)
RGD
UniProt
MGI
PMID:11013254 PMID:11044606 PMID:14623956 PMID:15950969 PMID:16241904 More... RGD:6771322 RGD:6771354 NCBI chrNW_004955416:27,823,611...27,858,112
Ensembl chrNW_004955416:27,823,611...27,858,173
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 RGD:6771322 NCBI chrNW_004955545:2,777,523...2,782,567
Ensembl chrNW_004955545:2,777,474...2,782,567
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 RGD:6771322 RGD:6771354 NCBI chrNW_004955449:5,360,486...5,380,279
Ensembl chrNW_004955449:5,359,617...5,380,267
JBrowse link
G Rbp1 retinol binding protein 1 ISO RGD PMID:15950969 RGD:6771322 NCBI chrNW_004955508:6,046,738...6,072,202
Ensembl chrNW_004955508:6,046,316...6,072,288
JBrowse link