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ONTOLOGY REPORT - ANNOTATIONS

Term:amide catabolic process
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Accession:GO:0043605 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.
Synonyms:exact_synonym: cellular amide catabolic process


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amide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:172,818,176...172,842,293 		JBrowse link
G Nit1 nitrilase 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:28373563) 		Ensembl
RGD		 PMID:28373563 GO_REF:0000107 NCBI chr13:86,302,334...86,305,770
Ensembl chr13:86,298,387...86,305,770 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:255,712,797...255,838,285
Ensembl chr 1:255,713,909...255,838,403 		JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in ISO
IBA
IEA 		(PMID:27374330)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000117 		RGD
GO_Central
Ensembl
UniProt		 PMID:27374330 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr13:45,790,161...45,812,206
Ensembl chr13:45,790,179...45,812,206 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:238,083,686...238,183,370 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:205,335,399...205,338,795 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:27,282,057...27,344,350 		JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:50,907,575...50,942,665
Ensembl chr 6:50,907,580...50,942,614 		JBrowse link
L-histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041
GO_REF:0000002 		UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 7:29,930,966...29,946,199
Ensembl chr 7:29,929,965...29,959,683 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,054,711...12,068,237 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:29,893,855...29,924,744 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:124,402,156...124,434,212 		JBrowse link
L-lysine catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dld dihydrolipoamide dehydrogenase involved_in ISO (PMID:37701333) RGD PMID:37701333 NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:53,619,631...53,652,354 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO (PMID:25214427) RGD PMID:25214427 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:40,168,141...40,175,686 		JBrowse link
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IEA
IBA 		(PMID:10642506)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:10642506 GO_REF:0000033 GO_REF:0000107 NCBI chr10:63,267,946...63,281,556
Ensembl chr10:63,267,972...63,282,273 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:34,520,236...34,566,388
Ensembl chr16:34,520,238...34,566,540 		JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:52,572,147...52,657,600 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:110,489,576...110,512,841
Ensembl chr 6:110,489,392...110,514,357 		JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO (PMID:25214427) RGD PMID:25214427 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:40,168,141...40,175,686 		JBrowse link
L-tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:48,188,182...48,339,014 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:7236232 GO_REF:0000033, RGD:2303721 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:169,567,654...169,585,586 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      metabolic process 11533
        amide metabolic process 487
          amide catabolic process 20
            L-asparagine biosynthetic process from oxaloacetate 0
            L-histidine catabolic process to glutamate and formamide 4
            L-lysine catabolic process to acetyl-CoA + 6
            L-methionine catabolic process to succinyl-CoA 0
            L-threonine catabolic process to acetyl-CoA 0
            L-tryptophan catabolic process to acetyl-CoA 2
            allantoin catabolic process + 1
            atrazine catabolic process to urea 0
            biotin catabolic process 0
            negative regulation of amide catabolic process + 0
            positive regulation of amide catabolic process + 0
            regulation of amide catabolic process + 0
            urea catabolic process + 0
paths to the root