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ONTOLOGY REPORT - ANNOTATIONS

Term:amide catabolic process
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Accession:GO:0043605 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.
Synonyms:exact_synonym: cellular amide catabolic process


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amide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in IEA
ISO		 GO_REF:0000107
MGI:1857117 (PMID:10720488), (PMID:16742956), (PMID:8064675)		 Ensembl
RGD		 PMID:8064675 PMID:10720488 PMID:16742956 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Gda guanine deaminase involved_in ISO (PMID:8064675) RGD PMID:8064675 NCBI chr 1:228,333,401...228,408,901
Ensembl chr 1:218,906,815...218,982,416 		JBrowse link
G Nit1 nitrilase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:28373563)		 Ensembl
RGD		 PMID:28373563 GO_REF:0000107 NCBI chr13:86,302,334...86,305,770
Ensembl chr13:83,765,941...83,773,332 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:10681516), (PMID:6301357) RGD PMID:6301357 PMID:10681516 NCBI chr10:101,238,552...101,240,666
Ensembl chr10:100,739,588...100,741,954 		JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (PMID:11690631) RGD PMID:11690631 NCBI chr 6:38,858,182...38,875,610
Ensembl chr 6:33,139,064...33,156,481 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO
IEA		 (PMID:5560407)
GO_REF:0000107		 RGD
Ensembl		 PMID:5560407 GO_REF:0000107 NCBI chr 1:255,712,797...255,838,285
Ensembl chr 1:245,772,277...245,897,913 		JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in ISO
IBA
IEA		 (PMID:27374330)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:27374330 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,790,161...45,812,206
Ensembl chr13:43,237,971...43,259,999 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:235,440,619...235,523,029 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:12,745,388...12,755,034
Ensembl chr12:7,709,312...7,718,923 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:195,905,763...195,909,159 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
MGI:2448161 (PMID:12502743), (PMID:1590774), (PMID:29895374), (PMID:30936145), (PMID:8064675), (PMID:8226898)		 Ensembl
RGD		 PMID:1590774 PMID:8064675 PMID:8226898 PMID:12502743 PMID:29895374 More... GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:21,530,113...21,592,268 		JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:45,179,181...45,214,275
Ensembl chr 6:45,179,187...45,214,223 		JBrowse link
L-histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 7:29,930,966...29,946,199
Ensembl chr 7:28,043,716...28,059,156 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:29,894,495...29,924,744
Ensembl chr 7:28,006,972...28,037,701 		JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:124,402,119...124,433,787
Ensembl chr 4:122,844,926...122,876,591 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IEA
IBA		 (PMID:10642506)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:10642506 GO_REF:0000033 GO_REF:0000107 NCBI chr10:63,267,946...63,281,556
Ensembl chr10:62,769,900...62,782,370 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:34,520,236...34,566,388
Ensembl chr16:29,509,394...29,544,332 		JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:52,572,146...52,628,811
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:110,489,576...110,512,841
Ensembl chr 6:104,758,631...104,783,296 		JBrowse link
L-tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:48,188,286...48,338,996
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7236232 GO_REF:0000033, RGD:2303721 NCBI chr 2:169,567,656...169,585,586
Ensembl chr 2:167,269,579...167,287,511 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        amide metabolic process 482
          amide catabolic process 22
            L-histidine catabolic process to glutamate and formamide 4
            L-lysine catabolic process to acetyl-CoA + 4
            L-threonine catabolic process to acetyl-CoA 0
            L-tryptophan catabolic process to acetyl-CoA 2
            allantoin catabolic process + 1
            atrazine catabolic process to urea 0
            biotin catabolic process 0
            formamide catabolic process 0
            methionine catabolic process to succinyl-CoA 0
            negative regulation of amide catabolic process + 0
            positive regulation of amide catabolic process + 0
            regulation of amide catabolic process + 0
            urea catabolic process + 0
paths to the root