Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of RNA splicing
go back to main search page
Accession:GO:0043484 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.



show annotations for term's descendants           Sort by:
regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff2 ALF transcription elongation factor 2 involved_in ISO
IBA
(PMID:19136466)
GO_REF:0000033
RGD
GO_Central
PMID:19136466 GO_REF:0000033 NCBI chr  X:147,928,130...148,432,484 JBrowse link
G Ahnak AHNAK nucleoprotein involved_in ISS
IBA
GO_REF:0000024
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 1:205,882,225...205,970,934 JBrowse link
G Akap17a A-kinase anchoring protein 17A involved_in ISO
IBA
(PMID:19840947)
GO_REF:0000033
RGD
GO_Central
PMID:19840947 GO_REF:0000033 NCBI chr12:16,310,427...16,315,166 JBrowse link
G Aurkaip1 aurora kinase A interacting protein 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:166,435,177...166,436,888 JBrowse link
G Brdt bromodomain testis associated involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22570411)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22570411 GO_REF:0000024 GO_REF:0000107 NCBI chr14:2,387,372...2,445,857 JBrowse link
G Ccnl1 cyclin L1 involved_in ISO
IEA
(PMID:12501247)
GO_REF:0000107
RGD
Ensembl
PMID:12501247 GO_REF:0000107 NCBI chr 2:152,495,169...152,508,855 JBrowse link
G Ccnl2 cyclin L2 involved_in ISO
IEA
(PMID:18216018)
GO_REF:0000107
RGD
Ensembl
PMID:18216018 GO_REF:0000107 NCBI chr 5:171,698,951...171,711,037 JBrowse link
G Cdk12 cyclin-dependent kinase 12 IDA RGD PMID:16537916 RGD:8553775 NCBI chr10:83,697,174...83,793,676 JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in ISO
ISS
(PMID:16946708)
GO_REF:0000024
RGD
UniProt
PMID:16946708 GO_REF:0000024 NCBI chr 3:97,380,407...97,455,253 JBrowse link
G Clk1 CDC-like kinase 1 involved_in ISO
IBA
(PMID:19168442)
GO_REF:0000033
RGD
GO_Central
PMID:19168442 GO_REF:0000033 NCBI chr 9:67,441,962...67,453,180 JBrowse link
G Clk2 CDC-like kinase 2 involved_in ISO
IBA
(PMID:9637771)
GO_REF:0000033
RGD
GO_Central
PMID:9637771 GO_REF:0000033 NCBI chr 2:176,868,423...176,880,412 JBrowse link
G Clk3 CDC-like kinase 3 involved_in ISO
IBA
IEA
ISS
(PMID:9637771)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:9637771 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:67,048,121...67,063,192 JBrowse link
G Clk4 CDC-like kinase 4 involved_in ISO
IBA
(PMID:19168442)
GO_REF:0000033
RGD
GO_Central
PMID:19168442 GO_REF:0000033 NCBI chr10:36,024,364...36,042,366 JBrowse link
G ENSRNOG00000066755 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Esrp1 epithelial splicing regulatory protein 1 involved_in ISO
IBA
ISS
(PMID:19285943)
(PMID:29107558)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:19285943 PMID:29107558 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:24,427,611...24,482,157 JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:19285943)
UniProt
GO_Central
Ensembl
RGD
PMID:19285943 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:34,034,559...34,041,726 JBrowse link
G Fam50a family with sequence similarity 50, member A involved_in ISO (PMID:32703943) RGD PMID:32703943 NCBI chr  X:157,246,533...157,253,650 JBrowse link
G Fastk Fas-activated serine/threonine kinase involved_in ISO (PMID:17135269), (PMID:17592127) RGD PMID:17135269 PMID:17592127 NCBI chr 4:11,624,697...11,628,769 JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:153,883,945...153,915,524 JBrowse link
G Fus Fus RNA binding protein involved_in ISO (PMID:25453086), (PMID:27731383) RGD PMID:25453086 PMID:27731383 NCBI chr 1:182,576,479...182,590,417 JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:19,412,944...19,429,364 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:28985503) RGD PMID:28985503 NCBI chr 7:136,253,633...136,260,085 JBrowse link
G Hnrnpf heterogeneous nuclear ribonucleoprotein F involved_in ISO
IBA
ISS
(PMID:20526337), (PMID:9111328)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:9111328 PMID:20526337 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:152,755,668...152,776,867 JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 involved_in ISO
IBA
IEA
ISS
(PMID:16946708)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:16946708 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:34,692,868...34,702,849 JBrowse link
G Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:97,780,890...97,786,846 JBrowse link
G Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:25,616,400...25,625,814 JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:93,226,373...93,239,084 JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:14,969,953...15,000,574 JBrowse link
G Ildr1 immunoglobulin-like domain containing receptor 1 involved_in ISO (PMID:28785060) RGD PMID:28785060 NCBI chr11:77,591,146...77,624,268 JBrowse link
G Ildr2 immunoglobulin-like domain containing receptor 2 involved_in ISO (PMID:28785060) RGD PMID:28785060 NCBI chr13:81,051,723...81,113,590 JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (PMID:36537190) RGD PMID:36537190 NCBI chr 5:142,051,844...142,089,175 JBrowse link
G LOC120099267 polypyrimidine tract-binding protein 1-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:16,599,145...16,600,911 JBrowse link
G LOC120102832 RNA-binding protein 12B-A-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:25,590,500...25,597,273 JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in ISO
IBA
IEA
(PMID:15257297), (PMID:16946708)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15257297 PMID:16946708 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:144,639,819...144,814,395 JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in ISO
IBA
(PMID:15257297), (PMID:16946708)
GO_REF:0000033
RGD
GO_Central
PMID:15257297 PMID:16946708 GO_REF:0000033 NCBI chr15:97,385,278...97,542,924 JBrowse link
G Mbnl3 muscleblind-like splicing regulator 3 involved_in ISO
IBA
(PMID:15257297)
GO_REF:0000033
RGD
GO_Central
PMID:15257297 GO_REF:0000033 NCBI chr  X:135,526,256...135,621,499 JBrowse link
G Mettl4 methyltransferase 4, N6-adenosine involved_in ISO (PMID:31913360) RGD PMID:31913360 NCBI chr 9:111,440,976...111,523,871 JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO
IEA
(PMID:10672515)
GO_REF:0000107
RGD
Ensembl
PMID:10672515 GO_REF:0000107 NCBI chr 1:106,021,161...106,023,871 JBrowse link
G Pqbp1 polyglutamine binding protein 1 acts_upstream_of_or_within ISO (PMID:23512658) RGD PMID:23512658 NCBI chr  X:14,603,516...14,608,091 JBrowse link
G Prx periaxin involved_in ISO
IBA
(PMID:21940993)
GO_REF:0000033
RGD
GO_Central
PMID:21940993 GO_REF:0000033 NCBI chr 1:91,912,669...91,934,754 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,842,574...9,852,332 JBrowse link
G Ptbp1-ps3 polypyrimidine tract binding protein 1, pseudogene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:105,696,627...105,698,961 JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:207,812,659...207,874,019 JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:74,313,367...74,399,439 JBrowse link
G Rbm12b RNA binding motif protein 12B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:25,597,405...25,610,324 JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
IBA
PMID:22466703
GO_REF:0000033
GO_Central PMID:22466703 GO_REF:0000033, RGD:7241566 NCBI chr 1:262,671,311...262,912,551 JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO
IBA
(PMID:19285943)
GO_REF:0000033
RGD
GO_Central
PMID:19285943 GO_REF:0000033 NCBI chr 3:161,801,577...161,814,381 JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (PMID:23604122) RGD PMID:23604122 NCBI chr20:10,122,825...10,148,404 JBrowse link
G Scamp3 secretory carrier membrane protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:176,880,873...176,886,750 JBrowse link
G Smptb polypyrimidine tract-binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:16,609,016...16,610,898 JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 involved_in ISO
ISS
(PMID:2467746)
GO_REF:0000024
RGD
UniProt
PMID:2467746 GO_REF:0000024 NCBI chr 1:104,992,518...105,012,851 JBrowse link
G Son SON DNA and RNA binding protein involved_in ISO (PMID:27545680) RGD PMID:27545680 NCBI chr11:44,336,818...44,409,127 JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in IBA
ISO
GO_REF:0000033
(PMID:19737518)
GO_Central
RGD
PMID:19737518 GO_REF:0000033 NCBI chr12:39,998,975...40,158,897 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:28785060) RGD PMID:28785060 NCBI chr10:73,335,519...73,342,549 JBrowse link
G Tra2b transformer 2 beta involved_in ISO
ISS
(PMID:10749975)
(PMID:28785060)
GO_REF:0000024
RGD
UniProt
PMID:10749975 PMID:28785060 GO_REF:0000024 NCBI chr11:78,788,880...78,807,252 JBrowse link
G Zc3h10 zinc finger CCCH type containing 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:973,415...977,742 JBrowse link
G Zfp326 zinc finger protein 326 involved_in ISO (PMID:22446626) RGD PMID:22446626 NCBI chr14:3,941,210...3,980,419 JBrowse link
G Zfp638 zinc finger protein 638 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,913,528...118,032,644 JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:32,072,121...32,117,004 JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr17:70,720,397...70,747,285 JBrowse link
G C1qbp complement C1q binding protein involved_in ISO
ISS
IEA
IBA
(PMID:10022843)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
RGD
UniProt
Ensembl
GO_Central
PMID:10022843 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:56,198,534...56,203,185 JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr18:16,786,578...17,065,045 JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:21470964)
Ensembl
RGD
PMID:21470964 GO_REF:0000107 NCBI chr11:47,360,824...47,479,033 JBrowse link
G ENSRNOG00000066561 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000070131 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr 4:81,867,354...81,875,886 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr17:6,269,302...6,280,429 JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:93,226,373...93,239,084 JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16376875)
GO_REF:0000107
RGD
Ensembl
PMID:16376875 GO_REF:0000107 NCBI chr10:17,741,512...17,751,626 JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:23636947)
GO_Central
RGD
PMID:23636947 GO_REF:0000033 NCBI chr 8:107,092,688...107,103,276 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:15009664)
(PMID:17679093)
(PMID:23636947)
GO_REF:0000024
RGD
UniProt
PMID:15009664 PMID:17679093 PMID:23636947 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332 JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 5:74,313,367...74,399,439 JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571 JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO
IDA
PMID:35394688
(PMID:27630136), (PMID:29895960), (PMID:33110103)
(PMID:24960161), (PMID:34732726)
PMID:25573899
PMID:23307558
RGD PMID:24960161 PMID:27630136 PMID:29895960 PMID:33110103 PMID:34732726 More... RGD:152025505, RGD:152025519, RGD:152025504, RGD:152025509 NCBI chr 1:262,671,311...262,912,551 JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:85,898,618...85,908,569 JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:46,312,176...46,315,802 JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS
(PMID:12665594)
GO_REF:0000024
RGD
UniProt
PMID:12665594 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858 JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:31,943,228...31,947,534 JBrowse link
G Sfswap splicing factor SWAP involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:27,109,607...27,179,941 JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:148,088,759...148,102,964 JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:144,060,981...144,090,798 JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:151,589,546...151,594,869 JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:20,564,035...20,571,205 JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in ISO
ISS
(PMID:15009664)
GO_REF:0000024
RGD
UniProt
PMID:15009664 GO_REF:0000024 NCBI chr12:41,278,225...41,284,502 JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:77,789,752...77,807,307 JBrowse link
negative regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 IMP RGD PMID:19116344 RGD:2313309 NCBI chr 1:92,004,705...92,061,420 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (PMID:18335065) RGD PMID:18335065 NCBI chr 7:9,842,574...9,852,332 JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 involved_in IMP
IEA
ISO
GO_REF:0000107
(PMID:18335065)
Ensembl
RGD
PMID:18335065 PMID:18534753 GO_REF:0000107, RGD:10045970 NCBI chr 2:207,812,659...207,874,019 JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 involved_in ISO
IEA
(PMID:18335065)
GO_REF:0000107
RGD
Ensembl
PMID:18335065 GO_REF:0000107 NCBI chr 5:74,313,367...74,399,439 JBrowse link
G Rps13 ribosomal protein S13 involved_in ISO
IEA
(PMID:17881366)
GO_REF:0000107
RGD
Ensembl
PMID:17881366 GO_REF:0000107 NCBI chr 1:170,572,925...170,575,355 JBrowse link
G Rps26 ribosomal protein S26 involved_in ISO (PMID:15716004) RGD PMID:15716004 NCBI chr 7:1,057,332...1,058,882 JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:19328063) RGD PMID:19328063 NCBI chr 7:130,527,313...130,542,567 JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr10:85,747,064...85,749,447 JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr 5:164,278,414...164,302,067 JBrowse link
G Upf1 UPF1, RNA helicase and ATPase acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:19,076,594...19,097,365 JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:75,757,442...75,768,478 JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr  X:116,335,308...116,353,332 JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 2:182,116,034...182,130,163 JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr18:16,786,578...17,065,045 JBrowse link
G Cirbp cold inducible RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:10,184,515...10,189,623 JBrowse link
G Dazap1 DAZ associated protein 1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 7:9,423,673...9,448,116 JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr10:105,047,567...105,057,561 JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535 JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:186,319,110...186,326,771 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:23636947)
Ensembl
RGD
PMID:23636947 GO_REF:0000107 NCBI chr 8:50,080,514...50,084,376 JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:196,315,112...196,320,880 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:65,211,632...65,244,532 JBrowse link
G Ncl nucleolin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:94,447,559...94,456,083 JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO
ISS
(PMID:28221134)
GO_REF:0000024
RGD
UniProt
PMID:28221134 GO_REF:0000024 NCBI chr 1:156,494,423...156,591,415 JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr15:81,269,413...81,308,734 JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO UniProtKB:Q8IWL8 (PMID:16186110) RGD PMID:16186110 NCBI chr13:73,528,746...73,539,295 JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18480465)
Ensembl
RGD
PMID:18480465 GO_REF:0000107 NCBI chr 1:216,966,104...216,977,549 JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:14,348,909...14,352,387 JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:140,342,544...140,352,121 JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA
IBA
PMID:19282290
GO_REF:0000033
GO_Central PMID:19282290 GO_REF:0000033, RGD:2316827 NCBI chr19:46,312,176...46,315,802 JBrowse link
G Rbmxl1b Rbmx like 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:43,956,275...43,957,957 JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:415,160...425,460 JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 7:1,409,360...1,415,407 JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:104,992,518...105,012,851 JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) RGD PMID:12840015 NCBI chr 6:112,826,374...112,850,459 JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20123736)
UniProt
RGD
PMID:20123736 GO_REF:0000024 NCBI chr 5:143,729,821...143,772,105 JBrowse link
G Tra2a transformer 2 alpha involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:22194695)
GO_Central
RGD
PMID:22194695 GO_REF:0000033 NCBI chr 4:79,551,699...79,570,621 JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
IBA
GO_REF:0000024
(PMID:15009664)
GO_REF:0000107
GO_REF:0000033
MGI:2176173|MGI:4450919 (PMID:22194695)
UniProt
RGD
Ensembl
GO_Central
PMID:15009664 PMID:22194695 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252 JBrowse link
G Tra2b-ps3 transformer 2 beta, pseudogene 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,634,622...109,636,026 JBrowse link
G Zfp64 zinc finger protein 64 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 3:157,666,819...157,695,774 JBrowse link
positive regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO
IBA
IEA
IMP
(PMID:28377597)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:28377597 PMID:28377597 GO_REF:0000033 GO_REF:0000107, RGD:13464257 NCBI chr11:47,360,824...47,479,033 JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO (PMID:11779464), (PMID:19622636)
(PMID:25164867)
RGD PMID:11779464 PMID:19622636 PMID:25164867 NCBI chr10:91,826,663...91,920,976 JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:19523114)
UniProt
GO_Central
RGD
PMID:19523114 GO_REF:0000024 GO_REF:0000033 NCBI chr17:934,931...957,604 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:22684629 RGD:10002775 NCBI chr17:6,269,302...6,280,429 JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like involved_in ISO (PMID:18669861) RGD PMID:18669861 NCBI chr 6:14,969,953...15,000,574 JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO (PMID:20625543) RGD PMID:20625543 NCBI chr20:3,875,411...3,877,866 JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO (PMID:20625543) RGD PMID:20625543 NCBI chr20:3,859,756...3,863,800 JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 IMP RGD PMID:11118435 RGD:632715 NCBI chr 7:100,837,707...100,995,644 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO
IEA
ISS
(PMID:20348923)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20348923 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660 JBrowse link
G Polr2a RNA polymerase II subunit A involved_in ISO (PMID:21536736) RGD PMID:21536736 NCBI chr10:54,951,162...54,977,179 JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:22466703) RGD PMID:22466703 NCBI chr 1:262,671,311...262,912,551 JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO
ISS
(PMID:22246180)
GO_REF:0000024
RGD
UniProt
PMID:22246180 GO_REF:0000024 NCBI chr18:56,283,807...56,294,615 JBrowse link
G Setx senataxin involved_in ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:32,825,771...32,878,740 JBrowse link
G Slc38a2 solute carrier family 38, member 2 involved_in ISO UniProtKB:P17861 (PMID:22215663) RGD PMID:22215663 NCBI chr 7:129,730,450...129,742,619 JBrowse link
G Smn1 survival of motor neuron 1, telomeric acts_upstream_of_or_within ISO (PMID:22037760) RGD PMID:22037760 NCBI chr 2:31,490,018...31,501,065 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IMP RGD PMID:16308321 RGD:11038784 NCBI chr10:73,335,519...73,342,549 JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IMP RGD PMID:9199345 RGD:11039429 NCBI chr 6:100,605,165...100,610,192 JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:21536736) RGD PMID:21536736 NCBI chr 1:77,789,752...77,807,307 JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:11283611) RGD PMID:11283611 NCBI chr 8:46,564,898...46,574,719 JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arb2a ARB2 cotranscriptional regulator A involved_in ISO (PMID:29311329) RGD PMID:29311329 NCBI chr 2:7,553,873...8,018,183 JBrowse link
G Arglu1 arginine and glutamate rich 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:30698747)
UniProt
RGD
PMID:30698747 GO_REF:0000024 NCBI chr16:87,455,097...87,479,148 JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:32109384)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:32109384 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:97,380,407...97,455,253 JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:70,904,462...71,729,072 JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO
IBA
(PMID:11158314)
GO_REF:0000033
RGD
GO_Central
PMID:11158314 GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163 JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in
acts_upstream_of_or_within
ISO (PMID:11158314)
(PMID:19720736)
RGD PMID:11158314 PMID:19720736 NCBI chr18:16,786,578...17,065,045 JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in ISO
IBA
(PMID:11158314)
GO_REF:0000033
RGD
GO_Central
PMID:11158314 GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322 JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in ISO
IBA
(PMID:14761971)
GO_REF:0000033
RGD
GO_Central
PMID:14761971 GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060 JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:23022728) RGD PMID:23022728 NCBI chr 7:111,091,127...111,109,353 JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:21343338), (PMID:23022728)
(PMID:23022728)
RGD PMID:21343338 PMID:23022728 NCBI chr10:91,723,508...91,732,210 JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IDA PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr11:47,360,824...47,479,033 JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:105,047,567...105,057,561 JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,945...153,915,524 JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO
ISS
(PMID:18653529)
GO_REF:0000024
RGD
UniProt
PMID:18653529 GO_REF:0000024 NCBI chr  X:147,240,239...147,278,057 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO
IEA
(PMID:25689357)
GO_REF:0000107
RGD
Ensembl
PMID:25689357 GO_REF:0000107 NCBI chr 7:136,253,633...136,260,085 JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in ISO
IEA
ISS
(PMID:25623890)
(PMID:22523384)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22523384 PMID:25623890 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:93,226,373...93,239,084 JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
GO_REF:0000107
(PMID:22325991)
Ensembl
RGD
PMID:22325991 GO_REF:0000107 NCBI chr13:92,609,791...92,618,580 JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
IBA
IDA
ISO
GO_REF:0000024
GO_REF:0000033
PMID:15345239
(PMID:24514149)
UniProt
GO_Central
RGD
PMID:24514149 PMID:15345239 GO_REF:0000024 GO_REF:0000033, RGD:1358238 NCBI chr 5:142,051,844...142,089,175 JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:34,447,023...34,953,684 JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IDA
IBA
PMID:15345239
GO_REF:0000033
GO_Central PMID:15345239 GO_REF:0000033, RGD:1358238 NCBI chr 7:100,837,707...100,995,644 JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22203037)
UniProt
Ensembl
RGD
PMID:22203037 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:122,639,268...122,646,650 JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in IMP PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 2:144,639,819...144,814,395 JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:31283468
(PMID:19720736)
RGD PMID:19720736 PMID:31283468 RGD:243049249 NCBI chr15:97,385,278...97,542,924 JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
ISS
ISO
PMID:9525963
(PMID:9525963)
RGD PMID:9525963 PMID:9525963 RGD:8553451 NCBI chr 1:106,021,161...106,023,871 JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:14615540), (PMID:17065982), (PMID:27223325)
GO_REF:0000033
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:14615540 PMID:17065982 PMID:27223325 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:69,506,983...69,632,437 JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO
IBA
(PMID:32197073)
(PMID:14615540), (PMID:16041372), (PMID:17065982), (PMID:27223325)
GO_REF:0000033
RGD
GO_Central
PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073 GO_REF:0000033 NCBI chr 1:87,700,328...87,741,755 JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:21296756)
UniProt
Ensembl
InterPro
RGD
PMID:21296756 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr10:61,880,807...61,914,471 JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO
ISS
(PMID:16260624), (PMID:21518792)
GO_REF:0000024
RGD
UniProt
PMID:16260624 PMID:21518792 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332 JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 7:109,663,490...109,674,443 JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:23300487)
GO_Central
RGD
PMID:23300487 GO_REF:0000033 NCBI chr10:8,152,198...10,248,120 JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
IMP
GO_REF:0000002
(PMID:17101796), (PMID:17715393)
MGI:1926224|MGI:4838182 (PMID:22357600)
GO_REF:0000033
PMID:37548402
Cacna1c
Fxr1, Mef2a, Mtmr3
Atp2b1, Mef2a
Mcl1
GO_REF:0000107
InterPro
RGD
GO_Central
Ensembl
PMID:17101796 PMID:17715393 PMID:22357600 PMID:37548402 PMID:28993448 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:401901235, RGD:329848961, RGD:329845874, RGD:329845873, RGD:329845872 NCBI chr 7:108,810,627...109,054,420 JBrowse link
G Rbfox3 RNA binding fox-1 homolog 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,720,355...104,157,277 JBrowse link
G Rbm11 RNA binding motif protein 11 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:21984414)
GO_REF:0000033
RGD
GO_Central
PMID:21984414 GO_REF:0000033 NCBI chr11:14,234,851...14,244,092 JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO
IBA
(PMID:26575292)
(PMID:25468569)
GO_REF:0000033
RGD
GO_Central
PMID:25468569 PMID:26575292 GO_REF:0000033 NCBI chr 2:197,634,174...197,642,697 JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO
IBA
(PMID:16129689)
GO_REF:0000033
RGD
GO_Central
PMID:16129689 GO_REF:0000033 NCBI chr 8:107,543,613...107,546,678 JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
IDA
PMID:33805770
PMID:27289039
UniProt PMID:33805770 PMID:27289039 RGD:152995553, RGD:152995577 NCBI chr 1:262,671,311...262,912,551 JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
IDA
(PMID:26844700), (PMID:26990106), (PMID:29104163)
(PMID:25313962)
GO_REF:0000033
PMID:27289039
RGD
GO_Central
PMID:25313962 PMID:26844700 PMID:26990106 PMID:29104163 PMID:27289039 GO_REF:0000033, RGD:152995577 NCBI chr17:18,275,681...18,288,231 JBrowse link
G Rbm25 RNA binding motif protein 25 involved_in ISO
IBA
(PMID:18663000)
GO_REF:0000033
RGD
GO_Central
PMID:18663000 GO_REF:0000033 NCBI chr 6:108,993,119...109,050,159 JBrowse link
G Rbm25l1 RNA binding motif protein 25-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,267,026...10,270,510 JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within
ISO (PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792)
MGI:5467987|MGI:5467988 (PMID:23129807)
RGD PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 More... NCBI chr 1:211,507,845...211,516,907 JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:31358901) RGD PMID:31358901 NCBI chr14:42,407,226...42,545,304 JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO
IEA
ISS
(PMID:18840686), (PMID:18951082)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18840686 PMID:18951082 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,298,866...117,328,107 JBrowse link
G Rbm7 RNA binding motif protein 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:48,831,894...48,838,399 JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO
GO_REF:0000024
(PMID:22203037)
UniProt
RGD
PMID:22203037 GO_REF:0000024 NCBI chr 2:186,854,018...186,856,802 JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in ISO
IEA
(PMID:12165565), (PMID:12761049)
GO_REF:0000107
RGD
Ensembl
PMID:12165565 PMID:12761049 GO_REF:0000107 NCBI chr  X:140,342,544...140,352,121 JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:46,312,176...46,315,802 JBrowse link
G Rbpms RNA binding protein, mRNA processing factor involved_in IMP PMID:37548402 UniProt PMID:37548402 RGD:401901235 NCBI chr16:58,239,370...58,395,424 JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 involved_in IDA PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 8:66,153,169...66,184,278 JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:21884984)
UniProt
RGD
PMID:21884984 GO_REF:0000024 NCBI chr14:30,859,109...30,879,828 JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS
(PMID:22203037)
GO_REF:0000024
RGD
UniProt
PMID:22203037 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858 JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:20966198), (PMID:22203037) RGD PMID:20966198 PMID:22203037 NCBI chr15:31,943,228...31,947,534 JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:55,856,691...55,875,262 JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within
ISO (PMID:29961578)
(PMID:25727884)
MGI:1856676 (PMID:23055939)
RGD PMID:23055939 PMID:25727884 PMID:29961578 NCBI chr12:39,998,975...40,158,897 JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509 JBrowse link
G Srsf19 serine and arginine rich splicing factor 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,695,314...45,741,153 JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:21470964)
GO_REF:0000033
RGD
GO_Central
PMID:21470964 GO_REF:0000033 NCBI chr10:102,052,158...102,055,365 JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:23132731)
(PMID:24440982)
UniProt
RGD
PMID:23132731 PMID:24440982 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869 JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS
(PMID:20932480)
GO_REF:0000024
RGD
UniProt
PMID:20932480 GO_REF:0000024 NCBI chr 5:143,729,821...143,772,105 JBrowse link
G Thumpd2 THUMP domain containing 2 involved_in ISO (PMID:37283053) RGD PMID:37283053 NCBI chr 6:13,924,742...13,976,657 JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:14966131), (PMID:17580305)
(PMID:10938105), (PMID:11514562)
RGD PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305 NCBI chr 4:118,852,765...118,883,252 JBrowse link
G Tra2b transformer 2 beta involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12165565), (PMID:12761049), (PMID:25689357)
UniProt
Ensembl
RGD
PMID:12165565 PMID:12761049 PMID:25689357 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252 JBrowse link
G Wtap WT1 associated protein involved_in ISO
IBA
(PMID:24407421)
GO_REF:0000033
RGD
GO_Central
PMID:24407421 GO_REF:0000033 NCBI chr 1:47,665,965...47,691,067 JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(PMID:29799838)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:29799838 GO_REF:0000033 GO_REF:0000107 NCBI chr14:21,185,438...21,215,934 JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
ISS
IEA
(PMID:24514149)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:24514149 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243 JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,269,302...6,280,429 JBrowse link
G Hnrnpk-ps1 heterogeneous nuclear ribonucleoprotein K, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:91,756,628...91,758,358 JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in ISO
IEA
ISS
(PMID:19574390)
(PMID:21300889)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19574390 PMID:21300889 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,041,131...102,047,182 JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (PMID:22196734) RGD PMID:22196734 NCBI chr 5:142,051,844...142,089,175 JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in ISO (PMID:22196734) RGD PMID:22196734 NCBI chr 9:34,447,023...34,953,684 JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IEA
ISO
GO_REF:0000117
(PMID:22196734)
UniProt
RGD
PMID:22196734 GO_REF:0000117 NCBI chr 7:100,837,707...100,995,644 JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO
ISS
(PMID:32017898)
(PMID:32017896)
GO_REF:0000024
RGD
UniProt
PMID:32017896 PMID:32017898 GO_REF:0000024 NCBI chr 2:215,997,641...216,012,833 JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:58,668,326...58,670,222 JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in
NOT|involved_in
ISO (PMID:28525753)
(PMID:29262316)
RGD PMID:28525753 PMID:29262316 NCBI chr10:59,640,915...59,697,291 JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:33378678), (PMID:33397958), (PMID:36627242)
(PMID:29021242)
GO_REF:0000033
(PMID:27029405), (PMID:31331967)
(PMID:34428287)
GO_REF:0000107
UniProt
RGD
GO_Central
Ensembl
PMID:27029405 PMID:29021242 PMID:31331967 PMID:33378678 PMID:33397958 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:50,387,716...50,501,568 JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935)
(PMID:33188278)
RGD PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 PMID:33188278 NCBI chr 1:262,671,311...262,912,551 JBrowse link
G Rbm39 RNA binding motif protein 39 involved_in ISO (PMID:15694343), (PMID:28302793), (PMID:28437394) RGD PMID:15694343 PMID:28302793 PMID:28437394 NCBI chr 3:144,662,998...144,696,222 JBrowse link
G Sf1 splicing factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:213,090,256...213,112,688 JBrowse link
G Son SON DNA and RNA binding protein involved_in ISO
IBA
(PMID:21504830)
GO_REF:0000033
RGD
GO_Central
PMID:21504830 GO_REF:0000033 NCBI chr11:44,336,818...44,409,127 JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,559,515...147,591,895 JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:26876937) RGD PMID:26876937 NCBI chr 5:148,088,759...148,102,964 JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:26876937), (PMID:32440474) RGD PMID:26876937 PMID:32440474 NCBI chr20:7,093,529...7,103,517 JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:11106748), (PMID:7488725) RGD PMID:7488725 PMID:11106748 NCBI chr 4:118,852,765...118,883,252 JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS
(PMID:26876937), (PMID:28984244)
GO_REF:0000024
RGD
UniProt
PMID:26876937 PMID:28984244 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    regulation of biological process 13375
      regulation of cellular process 13013
        regulation of metabolic process 6834
          regulation of primary metabolic process 5693
            regulation of RNA splicing 178
              negative regulation of RNA splicing + 32
              positive regulation of RNA splicing + 52
              regulation of mRNA splicing, via spliceosome + 119
Path 2
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      metabolic process 12157
        primary metabolic process 10741
          nucleobase-containing compound metabolic process 5945
            nucleobase-containing compound biosynthetic process 4857
              nucleic acid biosynthetic process 4579
                RNA biosynthetic process 4463
                  RNA processing 996
                    RNA splicing 457
                      regulation of RNA splicing 178
                        negative regulation of RNA splicing + 32
                        positive regulation of RNA splicing + 52
                        regulation of mRNA splicing, via spliceosome + 119
paths to the root