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ONTOLOGY REPORT - ANNOTATIONS

Term:lysosomal lumen
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Accession:GO:0043202 term browser browse the term
Definition:The volume enclosed within the lysosomal membrane.
Synonyms:never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
lysosomal lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP2 acid phosphatase 2, lysosomal located_in IEA UniProt GO_REF:0000044 NCBI chr11:47,185,611...47,195,174
Ensembl chr11:47,738,845...47,748,450 		JBrowse link
G CUBN cubilin ISO RGD PMID:15578272 RGD:2317835 NCBI chr10:17,141,464...17,446,867
Ensembl chr10:17,415,551...17,719,129 		JBrowse link
G EPDR1 ependymin related 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 7:38,556,734...38,588,059 JBrowse link
G FASLG Fas ligand located_in IEA UniProt GO_REF:0000044 NCBI chr 1:148,159,826...148,167,785
Ensembl chr 1:151,868,430...151,876,281 		JBrowse link
G GBA1 glucosylceramidase beta 1 located_in ISO (PMID:18022370) BHF-UCL PMID:18022370 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G GPC1 glypican 1 located_in IEA UniProt GO_REF:0000117 NCBI chr2B:127,684,839...127,717,294
Ensembl chr2B:246,511,082...246,523,569 		JBrowse link
G GPC2 glypican 2 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:92,204,355...92,213,750
Ensembl chr 7:105,637,682...105,644,888 		JBrowse link
G GPC3 glypican 3 located_in IEA UniProt GO_REF:0000117 NCBI chr  X:122,677,072...123,131,511
Ensembl chr  X:132,979,612...133,432,441 		JBrowse link
G GPC4 glypican 4 located_in IEA UniProt GO_REF:0000117 NCBI chr  X:122,441,290...122,555,192
Ensembl chr  X:132,746,519...132,860,420 		JBrowse link
G GPC5 glypican 5 located_in IEA UniProt GO_REF:0000117 NCBI chr13:72,588,968...74,051,961
Ensembl chr13:91,755,623...93,205,610 		JBrowse link
G GPC6 glypican 6 located_in IEA UniProt GO_REF:0000117 NCBI chr13:74,408,999...75,588,065
Ensembl chr13:93,874,849...94,739,894 		JBrowse link
G GUSB glucuronidase beta is_active_in ISO (PMID:8200966)
(PMID:23897660) 		MGI PMID:8200966 PMID:23897660 NCBI chr 7:60,087,130...60,109,289
Ensembl chr 7:64,724,841...64,744,909 		JBrowse link
G HGSNAT heparan-alpha-glucosaminide N-acetyltransferase is_active_in ISO (PMID:16960811) MGI PMID:16960811 NCBI chr 8:42,388,406...42,448,466 JBrowse link
G IDS iduronate 2-sulfatase is_active_in ISO (PMID:17876721) MGI PMID:17876721 NCBI chr  X:138,493,117...138,520,017
Ensembl chr  X:148,912,475...148,946,441 		JBrowse link
G IDUA alpha-L-iduronidase is_active_in ISO (PMID:9660052)
(PMID:17101178) 		MGI PMID:9660052 PMID:17101178 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877 		JBrowse link
G LGMN legumain is_active_in IEA Ensembl GO_REF:0000107 NCBI chr14:73,337,607...73,383,462
Ensembl chr14:92,677,608...92,723,051 		JBrowse link
G MAN2B1 mannosidase alpha class 2B member 1 is_active_in ISO (PMID:9305783) MGI PMID:9305783 NCBI chr19:12,208,319...12,228,934
Ensembl chr19:12,954,103...12,974,056 		JBrowse link
G MANBA mannosidase beta is_active_in ISO (PMID:29773673) MGI PMID:29773673 NCBI chr 4:95,055,206...95,184,727
Ensembl chr 4:105,718,124...105,846,251 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase is_active_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G NEU1 neuraminidase 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:31,522,392...31,526,097
Ensembl chr 6:32,409,217...32,412,971 		JBrowse link
G NSG1 neuronal vesicle trafficking associated 1 located_in IEA UniProt GO_REF:0000044 Ensembl chr 4:4,467,234...4,496,088 JBrowse link
G PDGFRB platelet derived growth factor receptor beta located_in IEA UniProt GO_REF:0000044 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530 		JBrowse link
G PLD3 phospholipase D family member 3 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr19:37,396,475...37,426,425
Ensembl chr19:45,910,035...45,939,343 		JBrowse link
G RNASET2 ribonuclease T2 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:164,895,396...164,923,008
Ensembl chr 6:169,872,780...169,899,599 		JBrowse link
G SCARB2 scavenger receptor class B member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:47,992,589...48,047,528
Ensembl chr 4:53,830,488...53,886,059 		JBrowse link
G SGSH N-sulfoglucosamine sulfohydrolase is_active_in IEA Ensembl GO_REF:0000107 NCBI chr17:74,636,854...74,647,958
Ensembl chr17:80,371,790...80,381,703 		JBrowse link
lysosomal matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in ISO PMID:18644871 RGD
MGI		 PMID:9038169 PMID:18644871 RGD:10059368 RGD:10412301 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G LAMP2 lysosomal associated membrane protein 2 located_in ISO PMID:18644871 MGI PMID:18644871 RGD:10412301 NCBI chr  X:109,700,185...109,743,579
Ensembl chr  X:119,886,982...119,929,896 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20330
    cellular anatomical structure 19896
      cytoplasm 11377
        vacuole 598
          vacuolar lumen 32
            lysosomal lumen 28
              acrosomal lumen 0
              endolysosome lumen 0
              lysosomal matrix 2
Path 2
Term Annotations click to browse term
  cellular_component 20330
    cellular anatomical structure 19896
      organelle 14817
        intracellular organelle 14397
          intracellular membrane-bounded organelle 12792
            vacuole 598
              lytic vacuole 501
                lysosome 501
                  lysosomal lumen 28
                    acrosomal lumen 0
                    endolysosome lumen 0
                    lysosomal matrix 2
paths to the root