ONTOLOGY REPORT - ANNOTATIONS
Term: extracellular structure organization
Accession: GO:0043062
browse the term
Definition: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
Synonyms: exact_synonym: extracellular structure organisation; extracellular structure organization and biogenesis
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Lamb1
laminin subunit beta 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
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Lamb2
laminin subunit beta 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
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Lamb3
laminin subunit beta 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
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Ntn4
netrin 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
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Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3620600|MGI:3620601|MGI:3620603 (PMID:16467571)
Ensembl RGD
PMID:16467571
GO_REF:0000107
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
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Pxdn
peroxidasin
involved_in acts_upstream_of
ISO
(PMID:25708780), (PMID:27697841), (PMID:32571911) (PMID:22842973), (PMID:25708780), (PMID:32571911) (PMID:32543734)
RGD
PMID:22842973 PMID:25708780 PMID:27697841 PMID:32543734 PMID:32571911
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
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Ramp2
receptor activity modifying protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:18097473)
UniProt RGD
PMID:18097473
GO_REF:0000024
NCBI chr10:86,187,366...86,190,692
Ensembl chr10:86,188,812...86,231,829
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Cma1
chymase 1
involved_in
ISO
(PMID:27068509)
RGD
PMID:27068509
NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
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Ctss
cathepsin S
involved_in
ISO IEA
(PMID:22952693) GO_REF:0000107
RGD Ensembl
PMID:22952693
GO_REF:0000107
NCBI chr 2:183,086,437...183,114,483
Ensembl chr 2:183,086,437...183,114,483
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Hpn
hepsin
involved_in
ISO IEA ISS
(PMID:16908524) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:16908524
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
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Cav1
caveolin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180364 (PMID:11884617)
Ensembl RGD
PMID:11884617
GO_REF:0000107
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
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Cav2
caveolin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180372 (PMID:11884617)
Ensembl RGD
PMID:11884617
GO_REF:0000107
NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
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Col3a1
collagen type III alpha 1 chain
involved_in
ISO
(PMID:22235340)
RGD
PMID:22235340
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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Col4a1
collagen type IV alpha 1 chain
involved_in
ISO
(PMID:18160688), (PMID:19949034), (PMID:23065703)
RGD
PMID:18160688 PMID:19949034 PMID:23065703
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
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Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:25158062)
RGD
PMID:25158062
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Dag1
dystroglycan 1
acts_upstream_of_or_within
ISO
MGI:1934902 (PMID:23217742)
RGD
PMID:23217742
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:26024086)
RGD
PMID:26024086
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Fermt1
FERM domain containing kindlin 1
involved_in
ISO
(PMID:24681597)
RGD
PMID:24681597
NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
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Fkrp
fukutin related protein
acts_upstream_of_or_within
ISO
MGI:4835411 (PMID:28039900)
RGD
PMID:28039900
NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
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Fktn
fukutin
acts_upstream_of_or_within
ISO
(PMID:29360985)
RGD
PMID:29360985
NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409
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Flrt2
fibronectin leucine rich transmembrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:21350012)
UniProt RGD
PMID:21350012
GO_REF:0000024
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
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Fshr
follicle stimulating hormone receptor
acts_upstream_of_or_within
ISO
MGI:2384087 (PMID:9811848)
RGD
PMID:9811848
NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
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Gas2
growth arrest-specific 2
acts_upstream_of_or_within
ISO
MGI:6187669 (PMID:27734842)
RGD
PMID:27734842
NCBI chr 1:101,452,361...101,582,619
Ensembl chr 1:101,482,591...101,582,619
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Hmcn1
hemicentin 1
involved_in
ISO
(PMID:34504132)
RGD
PMID:34504132
NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
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Itgb1
integrin subunit beta 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:24681597)
Ensembl RGD
PMID:24681597
GO_REF:0000107
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
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Large1
LARGE xylosyl- and glucuronyltransferase 1
acts_upstream_of_or_within
ISO
MGI:1856965 (PMID:12140558), (PMID:21970971)
RGD
PMID:12140558 PMID:21970971
NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930
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Mmp11
matrix metallopeptidase 11
acts_upstream_of_or_within
ISO
MGI:2387934 (PMID:18622425)
RGD
PMID:18622425
NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
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Pmp22
peripheral myelin protein 22
acts_upstream_of_or_within
ISO
MGI:3614822 (PMID:16436605)
RGD
PMID:16436605
NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
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Pomgnt1
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3623521 (PMID:21970971)
Ensembl RGD
PMID:21970971
GO_REF:0000107
NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149
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Pomt2
protein-O-mannosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:5302103 (PMID:21970971)
RGD
PMID:21970971
NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849
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Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:5645931 (PMID:33144400)
Ensembl RGD
PMID:33144400
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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Pxdn
peroxidasin
involved_in
ISO
(PMID:24895407), (PMID:28424209)
RGD
PMID:24895407 PMID:28424209
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
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Ric8a
RIC8 guanine nucleotide exchange factor A
acts_upstream_of_or_within
ISO
MGI:3608888 (PMID:21069829)
RGD
PMID:21069829
NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467
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Spint2
serine peptidase inhibitor, Kunitz type, 2
acts_upstream_of_or_within
ISO
MGI:2156187 (PMID:19592578)
RGD
PMID:19592578
NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616
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Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:2183192 (PMID:16186342)
RGD
PMID:16186342
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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Ctsg
cathepsin G
involved_in
ISO IEA ISS
(PMID:32995850) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:32995850
GO_REF:0000024 GO_REF:0000107
NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
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Acan
aggrecan
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856465 (PMID:3070812)
Ensembl RGD
PMID:3070812
GO_REF:0000107
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
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Adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12
involved_in
ISO
MGI:1347346|MGI:2146046 (PMID:29618652)
RGD
PMID:29618652
NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
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Adamts14
ADAM metallopeptidase with thrombospondin type 1 motif, 14
acts_upstream_of_or_within
ISO
(PMID:11741898)
RGD
PMID:11741898
NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
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Adamts19
ADAM metallopeptidase with thrombospondin type 1 motif, 19
involved_in
IEA ISO
GO_REF:0000107 (PMID:31844321)
Ensembl RGD
PMID:31844321
GO_REF:0000107
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
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Adamts2
ADAM metallopeptidase with thrombospondin type 1 motif, 2
acts_upstream_of_or_within
ISO
MGI:2388161 (PMID:16556917)
RGD
PMID:16556917
NCBI chr10:34,920,992...35,126,465
Ensembl chr10:34,921,049...35,123,821
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Adamts7
ADAM metallopeptidase with thrombospondin type 1 motif, 7
involved_in
ISO
MGI:1347346|MGI:2146046 (PMID:29618652)
RGD
PMID:29618652
NCBI chr 8:90,704,727...90,744,333
Ensembl chr 8:90,704,727...90,744,328
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Antxr2
ANTXR cell adhesion molecule 2
acts_upstream_of_or_within
ISO
MGI:1919164 (PMID:28604699)
RGD
PMID:28604699
NCBI chr14:11,541,718...11,682,110
Ensembl chr14:11,541,772...11,682,094
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Anxa2
annexin A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3028929 (PMID:14702107)
Ensembl RGD
PMID:14702107
GO_REF:0000107
NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
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Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856097|MGI:1856101|MGI:1856102|MGI:3588774 (PMID:16338116), (PMID:20889), (PMID:4808708), (PMID:8096378), (PMID:8895222)
RGD
PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
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Col11a1
collagen type XI alpha 1 chain
acts_upstream_of_or_within
TAS ISO
MGI:1856399|MGI:88457 (PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283)
RGD
PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 PMID:17683922 PMID:21467034 PMID:12962540 More...
RGD:1300046
NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
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Col11a2
collagen type XI alpha 2 chain
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:9188673) MGI:2154689 (PMID:10581026), (PMID:11668593) GO_REF:0000033
RGD GO_Central
PMID:9188673 PMID:10581026 PMID:11668593
GO_REF:0000033
NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985
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Col14a1
collagen type XIV alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:3846440 (PMID:22906538)
RGD
PMID:22906538
NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214
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Col18a1
collagen type XVIII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
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Col1a1
collagen type I alpha 1 chain
involved_in
ISO
(PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391)
RGD
PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
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Col1a2
collagen type I alpha 2 chain
involved_in
ISO IEA
(PMID:17211858), (PMID:18375391) GO_REF:0000107
RGD Ensembl
PMID:17211858 PMID:18375391
GO_REF:0000107
NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
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Col27a1
collagen type XXVII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174
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Col28a1
collagen type XXVIII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220
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Col2a1
collagen type II alpha 1 chain
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:1429602) MGI:1857275|MGI:2152978 (PMID:11171689), (PMID:3070812), (PMID:7276808), (PMID:7590256), (PMID:8989518), (PMID:9022054), (PMID:9832566), (PMID:9915573) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 PMID:9022054 PMID:9832566 PMID:9915573 PMID:11171689 More...
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
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Col3a1
collagen type III alpha 1 chain
involved_in acts_upstream_of_or_within
ISO
(PMID:7546986), (PMID:9036918) MGI:1857431 (PMID:9050868) MGI:1857431|MGI:1860700 (PMID:20587693), (PMID:24820199), (PMID:29551664), (PMID:31655293)
RGD
PMID:7546986 PMID:9036918 PMID:9050868 PMID:20587693 PMID:24820199 PMID:29551664 PMID:31655293 More...
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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Col5a1
collagen type V alpha 1 chain
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:3664598|MGI:88446 (PMID:15383546), (PMID:16492673), (PMID:17029294), (PMID:21467034) GO_REF:0000033 (PMID:11278977), (PMID:15095409), (PMID:9683580)
Ensembl RGD GO_Central
PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16492673 PMID:17029294 PMID:21467034 More...
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
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Col5a2
collagen type V alpha 2 chain
involved_in
ISO
(PMID:9425231) (PMID:15199158)
RGD
PMID:9425231 PMID:15199158
NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154
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Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356|MGI:88459 (PMID:25158062), (PMID:28604699)
RGD
PMID:25158062 PMID:28604699
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Comp
cartilage oligomeric matrix protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180787|MGI:5550566 (PMID:19808781), (PMID:24312420), (PMID:26746240)
Ensembl RGD
PMID:19808781 PMID:24312420 PMID:26746240
GO_REF:0000107
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
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Crtap
cartilage associated protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:114,047,929...114,067,636
Ensembl chr 8:114,047,933...114,067,631
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Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:23979599) GO_REF:0000024
Ensembl RGD UniProt
PMID:23979599
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
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Ddr2
discoidin domain receptor tyrosine kinase 2
involved_in
ISO
(PMID:19900459)
RGD
PMID:19900459
NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
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Dpt
dermatopontin
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2387341 (PMID:12230512), (PMID:16877395)
GO_Central RGD
PMID:12230512 PMID:16877395
GO_REF:0000033
NCBI chr13:77,123,224...77,151,646
Ensembl chr13:77,123,115...77,151,639
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Ero1a
endoplasmic reticulum oxidoreductase 1 alpha
acts_upstream_of_or_within
ISO
(PMID:28106121)
RGD
PMID:28106121
NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:19850926)
RGD
PMID:19850926
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Fkbp10
FKBP prolyl isomerase 10
acts_upstream_of_or_within
ISO
MGI:5432211 (PMID:24777781), (PMID:28206698)
RGD
PMID:24777781 PMID:28206698
NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
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Fmod
fibromodulin
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr13:45,493,517...45,504,134
Ensembl chr13:45,493,517...45,504,133
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Foxc1
forkhead box C1
acts_upstream_of_or_within
ISO
MGI:1856705 (PMID:10767326)
RGD
PMID:10767326
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
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Foxc2
forkhead box C2
acts_upstream_of_or_within
ISO
MGI:1857865 (PMID:10767326)
RGD
PMID:10767326
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
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Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:15539560)
RGD
PMID:15539560
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
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Lmx1b
LIM homeobox transcription factor 1 beta
acts_upstream_of_or_within
ISO
MGI:2158463 (PMID:10660670)
RGD
PMID:10660670
NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
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Lox
lysyl oxidase
acts_upstream_of_or_within involved_in
IDA ISO IBA IMP
(PMID:26700732) GO_REF:0000033
RGD GO_Central
PMID:26700732 PMID:16804742 PMID:16432278
GO_REF:0000033, RGD:1600668 , RGD:1600669
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
G
Loxl1
lysyl oxidase-like 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356
G
Loxl2
lysyl oxidase-like 2
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (PMID:21835952)
UniProt GO_Central Ensembl RGD
PMID:21835952
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
G
Loxl3
lysyl oxidase-like 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
G
Loxl4
lysyl oxidase-like 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:241,396,183...241,416,385
Ensembl chr 1:241,397,983...241,416,322
G
Mia3
MIA SH3 domain ER export factor 3
acts_upstream_of_or_within
ISO
MGI:5007248 (PMID:21606205)
RGD
PMID:21606205
NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
G
Mkx
mohawk homeobox
acts_upstream_of_or_within
ISO
MGI:5287572 (PMID:20696843)
RGD
PMID:20696843
NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
G
Mmp11
matrix metallopeptidase 11
acts_upstream_of_or_within
ISO
MGI:2387934 (PMID:18622425)
RGD
PMID:18622425
NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1857444 (PMID:10383727) GO_REF:0000107
HGNC-UCL RGD Ensembl
PMID:10383727
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Optc
opticin
involved_in
IBA ISO
GO_REF:0000033 (PMID:29323130)
GO_Central RGD
PMID:29323130
GO_REF:0000033
NCBI chr13:45,353,954...45,368,254
Ensembl chr13:45,355,148...45,365,237
G
P3h1
prolyl 3-hydroxylase 1
acts_upstream_of_or_within
ISO
MGI:4830452 (PMID:20363744)
RGD
PMID:20363744
NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659
G
P3h4
prolyl 3-hydroxylase family member 4
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:27119146) GO_REF:0000033 GO_REF:0000107
UniProt RGD GO_Central Ensembl
PMID:27119146
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:85,338,158...85,345,108
Ensembl chr10:85,338,161...85,345,093
G
P4ha1
prolyl 4-hydroxylase subunit alpha 1
acts_upstream_of_or_within involved_in
ISO IBA
MGI:3706369 (PMID:17135260) GO_REF:0000033
RGD GO_Central
PMID:17135260
GO_REF:0000033
NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786
G
P4ha3
prolyl 4-hydroxylase subunit alpha 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:154,628,723...154,663,779
Ensembl chr 1:154,628,736...154,663,775
G
Plod1
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:158,340,674...158,367,581
Ensembl chr 5:158,340,490...158,367,620
G
Plod2
procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255
G
Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
involved_in acts_upstream_of_or_within
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 MGI:3620600|MGI:3620603 (PMID:16467571)
Ensembl GO_Central RGD
PMID:16467571
GO_REF:0000033 GO_REF:0000107
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
G
Pxdn
peroxidasin
involved_in
ISO
(PMID:22842973)
RGD
PMID:22842973
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
G
Scx
scleraxis bHLH transcription factor
involved_in
ISO
(PMID:18802027)
RGD
PMID:18802027
NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
G
Selenon
selenoprotein N
acts_upstream_of_or_within
ISO
(PMID:28106121)
RGD
PMID:28106121
NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059
G
Serpinf2
serpin family F member 2
involved_in
ISO
(PMID:17958745)
RGD
PMID:17958745
NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
G
Serpinh1
serpin family H member 1
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 MGI:2176070|MGI:2385994|MGI:5505265 (PMID:10995453), (PMID:22492985)
GO_Central Ensembl RGD
PMID:10995453 PMID:22492985
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:153,643,500...153,650,853
Ensembl chr 1:153,643,510...153,650,801
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of_or_within
ISO
MGI:3664776 (PMID:19079247)
RGD
PMID:19079247
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:16891397)
AgBase RGD
PMID:16891397
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2388050 (PMID:15993878)
Ensembl RGD
PMID:15993878
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tnxb
tenascin XB
acts_upstream_of_or_within
ISO
MGI:2181283|MGI:3053791 (PMID:11925569), (PMID:15194424)
RGD
PMID:11925569 PMID:15194424
G
Vipas39
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3699244|MGI:5816979 (PMID:27435297)
Ensembl RGD
PMID:27435297
GO_REF:0000107
NCBI chr 6:106,888,284...106,913,139
Ensembl chr 6:106,888,284...106,913,117
G
Vps33b
VPS33B, late endosome and lysosome associated
acts_upstream_of_or_within
ISO
MGI:3699244|MGI:5770088 (PMID:27435297)
RGD
PMID:27435297
NCBI chr 1:134,223,967...134,247,232
Ensembl chr 1:134,223,949...134,246,970
G
Zfp469
zinc finger protein 469
acts_upstream_of_or_within
ISO
MGI:6765940 (PMID:34368841)
RGD
PMID:34368841
NCBI chr19:50,282,337...50,324,010
G
Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856097|MGI:3588774 (PMID:16338116), (PMID:20889), (PMID:3385878), (PMID:937819)
RGD
PMID:20889 PMID:937819 PMID:3385878 PMID:16338116
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
G
Col3a1
collagen type III alpha 1 chain
involved_in
ISO
MGI:1860700 (PMID:24820199)
RGD
PMID:24820199
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
G
Efemp2
EGF containing fibulin extracellular matrix protein 2
involved_in acts_upstream_of_or_within
ISO
(PMID:18973305), (PMID:27339457) (PMID:16478991), (PMID:20019329), (PMID:26178373), (PMID:26711913), (PMID:28508064) MGI:4410301 (PMID:19855011)
RGD
PMID:16478991 PMID:18973305 PMID:19855011 PMID:20019329 PMID:26178373 PMID:26711913 PMID:27339457 PMID:28508064 More...
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
G
Eln
elastin
TAS
RGD
PMID:10090127
RGD:731206
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
G
Emilin1
elastin microfibril interfacer 1
involved_in
ISO
(PMID:25056700)
RGD
PMID:25056700
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
G
Fbln5
fibulin 5
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:11805834), (PMID:11805835) GO_REF:0000033 GO_REF:0000107 (PMID:17035250)
UniProt RGD GO_Central Ensembl
PMID:11805834 PMID:11805835 PMID:17035250
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
G
Lox
lysyl oxidase
acts_upstream_of_or_within
IMP ISO
MGI:3610732 (PMID:12417550), (PMID:16192629), (PMID:23413430)
RGD
PMID:12417550 PMID:16192629 PMID:23413430 PMID:16432278
RGD:1600669
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
G
Ltbp4
latent transforming growth factor beta binding protein 4
involved_in
ISO
(PMID:25713297)
RGD
PMID:25713297
NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
G
Mfap4
microfibril associated protein 4
involved_in
ISO
(PMID:22355679)
RGD
PMID:22355679
NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
G
Myh11
myosin heavy chain 11
involved_in
ISO IEA
(PMID:16444274) GO_REF:0000107
RGD Ensembl
PMID:16444274
GO_REF:0000107
NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
G
Thsd4
thrombospondin type 1 domain containing 4
acts_upstream_of_or_within
ISO
(PMID:19940141)
RGD
PMID:19940141
NCBI chr 8:60,384,636...60,984,419
Ensembl chr 8:60,386,875...61,024,995
G
Tnxb
tenascin XB
involved_in
ISO
(PMID:15102077)
RGD
PMID:15102077
G
Col1a2
collagen type I alpha 2 chain
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856327 (PMID:22910579)
Ensembl RGD
PMID:22910579
GO_REF:0000107
NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:19114551)
RGD
PMID:19114551
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Eln
elastin
involved_in
IEA ISO
GO_REF:0000107 (PMID:20576933)
Ensembl RGD
PMID:20576933
GO_REF:0000107
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
G
Fkbp10
FKBP prolyl isomerase 10
acts_upstream_of_or_within
ISO
(PMID:28774593)
RGD
PMID:28774593
NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
G
Gas6
growth arrest specific 6
involved_in
IEP
PMID:18374201
UniProt
PMID:18374201
RGD:8554638
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
G
Gpm6b
glycoprotein m6b
involved_in
ISO ISS
(PMID:21638316) GO_REF:0000024
RGD UniProt
PMID:21638316
GO_REF:0000024
NCBI chr X:28,057,788...28,204,409
Ensembl chr X:28,059,450...28,204,211
G
Hapln2
hyaluronan and proteoglycan link protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4437572 (PMID:20181608)
Ensembl RGD
PMID:20181608
GO_REF:0000107
NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
G
Has1
hyaluronan synthase 1
involved_in
IBA ISO
GO_REF:0000033 (PMID:10455188)
GO_Central RGD
PMID:10455188
GO_REF:0000033
NCBI chr 1:58,693,411...58,705,653
Ensembl chr 1:58,693,411...58,705,397
G
Has2
hyaluronan synthase 2
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:10455188) GO_REF:0000033
UniProt RGD GO_Central
PMID:10455188
GO_REF:0000024 GO_REF:0000033
NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
G
Has3
hyaluronan synthase 3
involved_in
IBA ISO
GO_REF:0000033 (PMID:10455188)
GO_Central RGD
PMID:10455188
GO_REF:0000033
NCBI chr19:34,768,421...34,782,170
Ensembl chr19:34,771,982...34,782,592
G
Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:4356107 (PMID:19706528)
Ensembl RGD
PMID:19706528
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
G
Qsox1
quiescin sulfhydryl oxidase 1
involved_in
ISO
(PMID:23867277)
RGD
PMID:23867277
NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
G
Smpd3
sphingomyelin phosphodiesterase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856877 (PMID:22910579)
Ensembl RGD
PMID:22910579
GO_REF:0000107
NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
G
Sox9
SRY-box transcription factor 9
acts_upstream_of
ISO
MGI:2176205|MGI:2385468 (PMID:20881014)
RGD
PMID:20881014
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:19734317)
UniProt RGD
PMID:19734317
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Ccn2
cellular communication network factor 2
IMP
positive regulation
RGD
PMID:18613219
RGD:2314619
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
G
Creb3l1
cAMP responsive element binding protein 3-like 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:19767743)
UniProt RGD
PMID:19767743
GO_REF:0000024
NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
G
Eng
endoglin
IMP
RGD
PMID:15539634
RGD:1601032
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Tmem38b
transmembrane protein 38B
acts_upstream_of_or_within
ISO
MGI:1921416 (PMID:27188440)
RGD
PMID:27188440
NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
G
Zfp469
zinc finger protein 469
acts_upstream_of_or_within
ISO
MGI:6765940 (PMID:34368841)
RGD
PMID:34368841
NCBI chr19:50,282,337...50,324,010
G
Adamts15
ADAM metallopeptidase with thrombospondin type 1 motif, 15
involved_in
ISO
(PMID:23233679)
RGD
PMID:23233679
NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
G
Adamts5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
involved_in
ISO
(PMID:23233679)
RGD
PMID:23233679
NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
G
Capg
capping actin protein, gelsolin like
NOT|involved_in
ISO
(PMID:24236012)
RGD
PMID:24236012
NCBI chr 4:104,594,743...104,611,856
Ensembl chr 4:104,594,753...104,611,856
G
Cma1
chymase 1
involved_in
ISO
(PMID:27068509)
RGD
PMID:27068509
NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233
G
Eng
endoglin
involved_in
ISO
(PMID:18223685)
RGD
PMID:18223685
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Exoc8
exocyst complex component 8
involved_in
ISO
(PMID:24344185)
RGD
PMID:24344185
NCBI chr19:52,855,010...52,857,499
Ensembl chr19:52,852,578...52,857,491
G
Flot1
flotillin 1
involved_in
ISO
(PMID:21119006)
RGD
PMID:21119006
NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
G
Gsn
gelsolin
NOT|involved_in
ISO
(PMID:24236012)
RGD
PMID:24236012
NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
G
Kif9
kinesin family member 9
involved_in
ISO
(PMID:21119006)
RGD
PMID:21119006
NCBI chr 8:110,459,467...110,504,492
Ensembl chr 8:110,459,383...110,505,252
G
Klk4
kallikrein-related peptidase 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:4355346 (PMID:22243248)
GO_Central RGD
PMID:22243248
GO_REF:0000033
NCBI chr 1:94,344,195...94,349,425
Ensembl chr 1:94,344,195...94,349,424
G
Klk5
kallikrein related-peptidase 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:94,296,574...94,304,768
Ensembl chr 1:94,296,168...94,304,666
G
Lamc1
laminin subunit gamma 1
involved_in
ISO
(PMID:15159456)
RGD
PMID:15159456
NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
G
Lcp1
lymphocyte cytosolic protein 1
involved_in
ISO
(PMID:24236012)
RGD
PMID:24236012
NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
G
Mmp13
matrix metallopeptidase 13
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:17987127) (PMID:8576151), (PMID:9065415) GO_REF:0000024
Ensembl RGD UniProt
PMID:8576151 PMID:9065415 PMID:17987127
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
G
Mmp20
matrix metallopeptidase 20
acts_upstream_of_or_within
ISO
MGI:2447874 (PMID:22243248)
RGD
PMID:22243248
NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
G
Noxo1
NADPH oxidase organizer 1
involved_in
ISO
(PMID:19755710)
RGD
PMID:19755710
NCBI chr10:13,723,253...13,726,008
Ensembl chr10:13,721,473...13,726,061
G
Pbxip1
PBX homeobox interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3665440|MGI:6363079 (PMID:30659184)
Ensembl RGD
PMID:30659184
GO_REF:0000107
NCBI chr 2:174,856,339...174,868,922
Ensembl chr 2:174,856,397...174,868,919
G
Plg
plasminogen
involved_in
ISO
(PMID:14699093)
RGD
PMID:14699093
NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
G
Sh3pxd2b
SH3 and PX domains 2B
involved_in
ISO
(PMID:19755710)
RGD
PMID:19755710
NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
G
Tpsab1
tryptase alpha/beta 1
involved_in
ISO
(PMID:27068509)
RGD
PMID:27068509
NCBI chr10:14,360,396...14,362,811
Ensembl chr10:14,360,396...14,362,811
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Washc1
WASH complex subunit 1
involved_in
ISO
(PMID:24344185)
RGD
PMID:24344185
NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
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Wdr72
WD repeat domain 72
acts_upstream_of_or_within
ISO
MGI:5913851 (PMID:26247047)
RGD
PMID:26247047
NCBI chr 8:74,838,338...75,020,938
Ensembl chr 8:74,838,318...75,018,229
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Abi3bp
ABI family member 3 binding protein
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
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Adamts1
ADAM metallopeptidase with thrombospondin type 1 motif, 1
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
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Adamts10
ADAM metallopeptidase with thrombospondin type 1 motif, 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620
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Adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
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Adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
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Adamts14
ADAM metallopeptidase with thrombospondin type 1 motif, 14
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
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Adamts15
ADAM metallopeptidase with thrombospondin type 1 motif, 15
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
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Adamts16
ADAM metallopeptidase with thrombospondin type 1 motif, 16
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:32,430,436...32,562,481
Ensembl chr 1:32,430,436...32,560,494
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Adamts17
ADAM metallopeptidase with thrombospondin type 1 motif, 17
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:120,445,800...120,768,204
Ensembl chr 1:120,445,749...120,768,202
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Adamts18
ADAM metallopeptidase with thrombospondin type 1 motif, 18
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
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Adamts2
ADAM metallopeptidase with thrombospondin type 1 motif, 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:34,920,992...35,126,465
Ensembl chr10:34,921,049...35,123,821
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Adamts20
ADAM metallopeptidase with thrombospondin type 1 motif, 20
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18454205)
GO_Central RGD
PMID:18454205
GO_REF:0000033
NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777
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Adamts3
ADAM metallopeptidase with thrombospondin type 1, motif 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:18,231,128...18,437,771
Ensembl chr14:18,231,165...18,435,556
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Adamts4
ADAM metallopeptidase with thrombospondin type 1 motif, 4
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr13:83,670,556...83,680,045
Ensembl chr13:83,670,183...83,680,065
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Adamts5
ADAM metallopeptidase with thrombospondin type 1 motif, 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
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Adamts6
ADAM metallopeptidase with thrombospondin type 1 motif, 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
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Adamts7
ADAM metallopeptidase with thrombospondin type 1 motif, 7
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 8:90,704,727...90,744,333
Ensembl chr 8:90,704,727...90,744,328
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Adamts8
ADAM metallopeptidase with thrombospondin type 1 motif, 8
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:29,349,078...29,368,413
Ensembl chr 8:29,349,114...29,368,404
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Adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9
involved_in
IBA ISO
GO_REF:0000033 (PMID:20096780)
GO_Central RGD
PMID:20096780
GO_REF:0000033
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
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Adamtsl1
ADAMTS-like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:99,964,406...100,919,786
Ensembl chr 5:99,964,486...100,918,384
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Adamtsl2
ADAMTS-like 2
acts_upstream_of_or_within
ISO
(PMID:25762570)
RGD
PMID:25762570
NCBI chr 3:10,397,774...10,434,557
Ensembl chr 3:10,404,626...10,434,554
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Adamtsl3
ADAMTS-like 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:136,288,793...136,596,986
Ensembl chr 1:136,288,793...136,596,986
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Adamtsl4
ADAMTS-like 4
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848
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Adamtsl5
ADAMTS-like 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:9,362,623...9,371,248
Ensembl chr 7:9,363,237...9,370,285
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Agt
angiotensinogen
acts_upstream_of_or_within
ISO
MGI:2136636 (PMID:9734405)
RGD
PMID:9734405
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
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Apbb1
amyloid beta precursor protein binding family B member 1
acts_upstream_of_or_within
ISO
MGI:108405 (PMID:16407979)
RGD
PMID:16407979
NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
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Apbb2
amyloid beta precursor protein binding family B member 2
acts_upstream_of_or_within
ISO
MGI:107765 (PMID:16407979)
RGD
PMID:16407979
NCBI chr14:41,557,918...41,878,622
Ensembl chr14:41,557,972...41,877,495
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Aplp1
amyloid beta precursor like protein 1
acts_upstream_of_or_within
ISO
MGI:88047|MGI:88059 (PMID:15385965)
RGD
PMID:15385965
NCBI chr 1:85,696,880...85,707,215
Ensembl chr 1:85,696,882...85,707,155
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Aplp2
amyloid beta precursor like protein 2
acts_upstream_of_or_within
ISO
MGI:88046|MGI:88059 (PMID:15385965)
RGD
PMID:15385965
NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855
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App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:88046|MGI:88047 (PMID:15385965) GO_REF:0000107
UniProt RGD Ensembl
PMID:15385965
GO_REF:0000024 GO_REF:0000107
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
ISO
MGI:1856097 (PMID:1115218)
RGD
PMID:1115218
NCBI chr X:71,094,144...71,201,550
Ensembl chr X:71,094,202...71,198,354
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Atxn1l
ataxin 1 like
acts_upstream_of_or_within
ISO
MGI:5301616 (PMID:22014525)
RGD
PMID:22014525
NCBI chr19:37,700,341...37,711,529
Ensembl chr19:37,700,106...37,711,538
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B4galt1
beta-1,4-galactosyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2178779 (PMID:11900463)
Ensembl RGD
PMID:11900463
GO_REF:0000107
NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
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Bcl3
BCL3, transcription coactivator
acts_upstream_of_or_within
ISO
MGI:2158443 (PMID:10586052)
RGD
PMID:10586052
NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
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C20h6orf15
similar to human chromosome 6 open reading frame 15
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr20:3,172,330...3,173,886
Ensembl chr20:3,172,330...3,173,886
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Ccdc80
coiled-coil domain containing 80
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
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Ccn1
cellular communication network factor 1
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
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Col10a1
collagen type X alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
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Col11a1
collagen type XI alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
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Col13a1
collagen type XIII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
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Col15a1
collagen type XV alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591
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Col16a1
collagen type XVI alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
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Col17a1
collagen type XVII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:246,530,589...246,577,559
Ensembl chr 1:246,531,367...246,577,632
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Col18a1
collagen type XVIII alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2179134 (PMID:15254016)
RGD
PMID:15254016
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
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Col19a1
collagen type XIX alpha 1 chain
acts_upstream_of_or_within involved_in
ISO IBA
MGI:3053870 (PMID:15302855) GO_REF:0000033
RGD GO_Central
PMID:15302855
GO_REF:0000033
NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106
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Col1a1
collagen type I alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
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Col1a2
collagen type I alpha 2 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
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Col22a1
collagen type XXII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462
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Col23a1
collagen type XXIII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:35,549,090...35,839,152
Ensembl chr10:35,549,113...35,836,314
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Col24a1
collagen type XXIV alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441
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Col27a1
collagen type XXVII alpha 1 chain
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5315593 (PMID:22206015)
Ensembl RGD
PMID:22206015
GO_REF:0000107
NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174
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Col3a1
collagen type III alpha 1 chain
involved_in
ISO IBA
MGI:1857431|MGI:1860700 (PMID:25330296), (PMID:31655293) GO_REF:0000033
RGD GO_Central
PMID:25330296 PMID:31655293
GO_REF:0000033
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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Col4a1
collagen type IV alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
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Col4a2
collagen type IV alpha 2 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
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Col4a3
collagen type IV alpha 3 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895
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Col4a5
collagen type IV alpha 5 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:105,118,762...105,322,699
Ensembl chr X:105,118,820...105,322,692
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Col4a6
collagen type IV alpha 6 chain
acts_upstream_of_or_within involved_in
ISO IBA
(PMID:10965041) GO_REF:0000033
RGD GO_Central
PMID:10965041
GO_REF:0000033
NCBI chr X:104,766,463...105,117,499
Ensembl chr X:104,766,957...105,117,500
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Col5a2
collagen type V alpha 2 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154
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Col5a3
collagen type V alpha 3 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853
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Col6a1
collagen type VI alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
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Col6a4
collagen, type VI, alpha 4
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:106,617,169...106,733,493
Ensembl chr 8:106,617,050...106,733,263
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Col7a1
collagen type VII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:109,604,877...109,637,249
Ensembl chr 8:109,604,861...109,637,252
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Col8a1
collagen type VIII alpha 1 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
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Col8a2
collagen type VIII alpha 2 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850
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Col9a2
collagen type IX alpha 2 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677
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Col9a3
collagen type IX alpha 3 chain
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465
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Colq
collagen like tail subunit of asymmetric acetylcholinesterase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
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Crispld2
cysteine-rich secretory protein LCCL domain containing 2
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr19:48,053,153...48,111,485
Ensembl chr19:48,053,287...48,110,465
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Csgalnact1
chondroitin sulfate N-acetylgalactosaminyltransferase 1
acts_upstream_of_or_within
ISO
MGI:4947395 (PMID:21148564)
RGD
PMID:21148564
NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319
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Dmp1
dentin matrix acidic phosphoprotein 1
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000002 (PMID:18757743) GO_REF:0000033 GO_REF:0000107
InterPro RGD GO_Central Ensembl
PMID:18757743
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
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Dnajb6
DnaJ heat shock protein family (Hsp40) member B6
acts_upstream_of_or_within
ISO
MGI:2151092 (PMID:21972064)
RGD
PMID:21972064
NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659
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Ecm2
extracellular matrix protein 2
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516
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Egfl6
EGF-like-domain, multiple 6
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr X:27,884,087...27,942,044
Ensembl chr X:27,884,125...27,942,044
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Egflam
EGF-like, fibronectin type III and laminin G domains
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18757743)
Ensembl RGD
PMID:18757743
GO_REF:0000107
NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
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Elf3
E74 like ETS transcription factor 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2662485 (PMID:11984530)
Ensembl RGD
PMID:11984530
GO_REF:0000107
NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
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Eln
elastin
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
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Emilin1
elastin microfibril interfacer 1
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
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Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
acts_upstream_of_or_within
ISO
MGI:2183949 (PMID:9651581)
RGD
PMID:9651581
NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
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Ero1a
endoplasmic reticulum oxidoreductase 1 alpha
acts_upstream_of_or_within
ISO
MGI:1859815|MGI:1914725 (PMID:22981861)
RGD
PMID:22981861
NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
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Ero1b
endoplasmic reticulum oxidoreductase 1 beta
acts_upstream_of_or_within
ISO
MGI:1354385|MGI:1859815 (PMID:22981861)
RGD
PMID:22981861
NCBI chr17:85,861,086...86,003,244
Ensembl chr17:85,929,618...86,003,398
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Fbln1
fibulin 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
G
Fbln5
fibulin 5
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
G
Fkrp
fukutin related protein
acts_upstream_of_or_within
ISO
(PMID:31296900)
RGD
PMID:31296900
NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
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Fn1
fibronectin 1
IMP
RGD
PMID:12388756
RGD:1358623
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
G
Foxf1
forkhead box F1
acts_upstream_of_or_within
ISO
MGI:1347479 (PMID:16439479)
RGD
PMID:16439479
NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
G
Foxf2
forkhead box F2
acts_upstream_of_or_within
ISO
MGI:1347470|MGI:2667134 (PMID:16439479)
RGD
PMID:16439479
NCBI chr17:32,835,730...32,842,547
Ensembl chr17:32,836,777...32,842,176
G
Gfap
glial fibrillary acidic protein
acts_upstream_of_or_within
ISO
MGI:2183221 (PMID:11487638)
RGD
PMID:11487638
NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
G
Gfod2
Gfo/Idh/MocA-like oxidoreductase domain containing 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr19:33,599,689...33,647,060
Ensembl chr19:33,604,187...33,647,004
G
Hpse2
heparanase 2 (inactive)
acts_upstream_of_or_within
ISO
MGI:4308701 (PMID:25510506)
RGD
PMID:25510506
NCBI chr 1:241,582,904...242,284,348
Ensembl chr 1:241,583,187...242,246,118
G
Hsd17b12
hydroxysteroid (17-beta) dehydrogenase 12
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
G
Hspg2
heparan sulfate proteoglycan 2
acts_upstream_of_or_within
ISO
MGI:1934892 (PMID:10579729)
RGD
PMID:10579729
NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
G
Ibsp
integrin-binding sialoprotein
involved_in acts_upstream_of_or_within
ISS IEA ISO IBA
GO_REF:0000024 GO_REF:0000107 (PMID:18757743) GO_REF:0000033
UniProt Ensembl RGD GO_Central
PMID:18757743
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693
G
Idua
alpha-L-iduronidase
acts_upstream_of_or_within
ISO
MGI:2176236 (PMID:25410057)
RGD
PMID:25410057
NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
G
Impg1
interphotoreceptor matrix proteoglycan 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:6693683 (PMID:32265257)
Ensembl RGD
PMID:32265257
GO_REF:0000107
NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722
G
Impg2
interphotoreceptor matrix proteoglycan 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:6693686 (PMID:32265257)
Ensembl RGD
PMID:32265257
GO_REF:0000107
NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382
G
Itga8
integrin subunit alpha 8
acts_upstream_of_or_within
ISO
MGI:2181699 (PMID:10742111)
RGD
PMID:10742111
NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510
G
Itih1
inter-alpha trypsin inhibitor, heavy chain 1
acts_upstream_of_or_within
ISO
(PMID:17675295)
RGD
PMID:17675295
NCBI chr16:6,122,246...6,136,363
Ensembl chr16:6,122,248...6,136,363
G
Kazald1
Kazal-type serine peptidase inhibitor domain 1
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 1:243,939,596...243,943,060
Ensembl chr 1:243,939,647...243,943,059
G
Lgals3
galectin 3
acts_upstream_of_or_within
ISO
MGI:97011 (PMID:15800063)
RGD
PMID:15800063
NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
G
Mansc4
MANSC domain containing 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:179,991,845...180,000,716
Ensembl chr 4:179,991,860...180,001,038
G
Matn3
matrilin 3
involved_in
ISO
(PMID:10660556)
RGD
PMID:10660556
NCBI chr 6:31,748,517...31,768,564
Ensembl chr 6:31,748,474...31,768,101
G
Mia
MIA SH3 domain containing
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2159701 (PMID:11839810)
GO_Central RGD
PMID:11839810
GO_REF:0000033
NCBI chr 1:82,473,677...82,476,378
Ensembl chr 1:82,473,678...82,475,370
G
Mmp1
matrix metallopeptidase 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
G
Mmp10
matrix metallopeptidase 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,689,840...4,697,748
Ensembl chr 8:4,689,840...4,697,748
G
Mmp11
matrix metallopeptidase 11
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2387934 (PMID:18622425)
GO_Central RGD
PMID:18622425
GO_REF:0000033
NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
G
Mmp12
matrix metallopeptidase 12
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
G
Mmp13
matrix metallopeptidase 13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
G
Mmp14
matrix metallopeptidase 14
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
G
Mmp15
matrix metallopeptidase 15
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:9,663,449...9,684,943
Ensembl chr19:9,663,449...9,684,943
G
Mmp16
matrix metallopeptidase 16
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388
G
Mmp17
matrix metallopeptidase 17
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr12:27,074,398...27,099,317
Ensembl chr12:27,074,409...27,099,316
G
Mmp19
matrix metallopeptidase 19
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
G
Mmp1b
matrix metallopeptidase 1b (interstitial collagenase)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,598,326...4,606,965
Ensembl chr 8:4,598,391...4,606,965
G
Mmp2
matrix metallopeptidase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
G
Mmp20
matrix metallopeptidase 20
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
G
Mmp21
matrix metallopeptidase 21
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
G
Mmp23
matrix metallopeptidase 23
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:166,239,643...166,242,734
Ensembl chr 5:166,239,644...166,242,433
G
Mmp24
matrix metallopeptidase 24
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572
G
Mmp27
matrix metallopeptidase 27
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,745,887...4,755,806
Ensembl chr 8:4,745,883...4,755,806
G
Mmp28
matrix metallopeptidase 28
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:68,241,138...68,264,866
Ensembl chr10:68,241,138...68,264,866
G
Mmp3
matrix metallopeptidase 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
G
Mmp7
matrix metallopeptidase 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
G
Mmp8
matrix metallopeptidase 8
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:4,724,009...4,733,864
Ensembl chr 8:4,724,029...4,733,520
G
Mmp9
matrix metallopeptidase 9
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:1932294|MGI:96778 (PMID:15800063) GO_REF:0000033
Ensembl RGD GO_Central
PMID:15800063
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
G
Mpzl3
myelin protein zero-like 3
acts_upstream_of_or_within
ISO
MGI:1857012 (PMID:15482472)
RGD
PMID:15482472
NCBI chr 8:45,360,475...45,380,662
Ensembl chr 8:45,349,054...45,380,662
G
Myf5
myogenic factor 5
acts_upstream_of_or_within
ISO
MGI:1857973 (PMID:16554364)
RGD
PMID:16554364
NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
G
Ndnf
neuron-derived neurotrophic factor
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr 4:94,944,392...94,981,871
Ensembl chr 4:94,944,360...94,981,873
G
Nepn
nephrocan
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr20:31,786,607...31,799,458
Ensembl chr20:31,783,526...31,799,446
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857478 (PMID:16835260)
HGNC-UCL RGD
PMID:16835260
GO_REF:0000024
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Nfkb2
nuclear factor kappa B subunit 2
acts_upstream_of_or_within
ISO
MGI:2179705 (PMID:10586052)
RGD
PMID:10586052
NCBI chr 1:245,164,586...245,173,225
Ensembl chr 1:245,165,950...245,173,213
G
Nid1
nidogen 1
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr17:86,085,133...86,158,272
Ensembl chr17:86,085,077...86,158,267
G
Nox1
NADPH oxidase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3616995 (PMID:16386251)
Ensembl RGD
PMID:16386251
GO_REF:0000107
NCBI chr X:97,279,058...97,332,291
Ensembl chr X:97,279,056...97,302,236
G
Nphp3
nephrocystin 3
acts_upstream_of_or_within
ISO
MGI:1856987 (PMID:7539536)
RGD
PMID:7539536
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
G
Npnt
nephronectin
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176560 (PMID:16424942)
RGD
PMID:16424942
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Olfml2a
olfactomedin-like 2A
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 3:22,688,590...22,717,917
Ensembl chr 3:22,688,598...22,717,909
G
Olfml2b
olfactomedin-like 2B
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr13:82,869,414...82,906,607
Ensembl chr13:82,869,433...82,906,607
G
Otol1
otolin 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023
G
Papln
papilin, proteoglycan-like sulfated glycoprotein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:103,398,166...103,432,199
Ensembl chr 6:103,398,838...103,432,206
G
Pdgfra
platelet derived growth factor receptor alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926728 (PMID:15543606)
Ensembl RGD
PMID:15543606
GO_REF:0000107
NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
G
Pomt1
protein-O-mannosyltransferase 1
acts_upstream_of_or_within
ISO
MGI:3497739 (PMID:15383666)
RGD
PMID:15383666
NCBI chr 3:15,520,717...15,538,579
Ensembl chr 3:15,520,481...15,538,581
G
Postn
periostin
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:16314533)
GO_Central RGD
PMID:16314533
GO_REF:0000033
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
G
Prdx4
peroxiredoxin 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1354385|MGI:1914725 (PMID:22981861)
Ensembl RGD
PMID:22981861
GO_REF:0000107
NCBI chr X:40,026,762...40,044,066
Ensembl chr X:40,026,651...40,044,066
G
Ptk2
protein tyrosine kinase 2
acts_upstream_of_or_within
ISO
MGI:2684666 (PMID:14642275)
RGD
PMID:14642275
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Ptx3
pentraxin 3
acts_upstream_of_or_within
ISO
(PMID:17675295)
RGD
PMID:17675295
NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
G
Pxdn
peroxidasin
involved_in
ISO
(PMID:19590037)
RGD
PMID:19590037
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
G
Reck
reversion-inducing-cysteine-rich protein with kazal motifs
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3623517 (PMID:11747814)
GO_Central RGD
PMID:11747814
GO_REF:0000033
NCBI chr 5:58,102,961...58,169,516
Ensembl chr 5:58,102,981...58,169,502
G
Rxfp1
relaxin family peptide receptor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3054831 (PMID:15256493)
Ensembl RGD
PMID:15256493
GO_REF:0000107
NCBI chr 2:164,772,270...164,893,484
Ensembl chr 2:164,774,799...164,893,412
G
Scara3
scavenger receptor class A, member 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894
G
Serac1
serine active site containing 1
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727
G
Serpinb5
serpin family B member 5
acts_upstream_of_or_within
ISO
MGI:3040188 (PMID:18593913)
RGD
PMID:18593913
NCBI chr13:22,985,557...23,005,756
Ensembl chr13:22,985,557...23,005,756
G
Slc39a8
solute carrier family 39 member 8
acts_upstream_of
ISO ISS
(PMID:29337306) GO_REF:0000024
RGD UniProt
PMID:29337306
GO_REF:0000024
NCBI chr 2:224,171,787...224,319,326
Ensembl chr 2:224,256,654...224,319,129
G
Smarca4
SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4
acts_upstream_of_or_within
ISO
MGI:2450311|MGI:3605892 (PMID:18267097)
RGD
PMID:18267097
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
G
Smoc1
SPARC related modular calcium binding 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
G
Smoc2
SPARC related modular calcium binding 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385468|MGI:2450311 (PMID:17350610), (PMID:24191021)
RGD
PMID:17350610 PMID:24191021
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Spint1
serine peptidase inhibitor, Kunitz type 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3709554 (PMID:17174946)
GO_Central RGD
PMID:17174946
GO_REF:0000033
NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
G
Spock2
SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr20:28,037,334...28,064,272
Ensembl chr20:28,033,475...28,064,272
G
Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within
ISO
MGI:1888389 (PMID:11784073), (PMID:15528466)
RGD
PMID:11784073 PMID:15528466
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbi
transforming growth factor, beta induced
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
G
Tnf
tumor necrosis factor
acts_upstream_of_or_within
ISO
(PMID:15381731)
RGD
PMID:15381731
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf11b
TNF receptor superfamily member 11B
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
G
Tnr
tenascin R
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154583 (PMID:10341229), (PMID:11077416), (PMID:16870730)
Ensembl RGD
PMID:10341229 PMID:11077416 PMID:16870730
GO_REF:0000107
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Tnxb
tenascin XB
acts_upstream_of_or_within
ISO
MGI:3053791 (PMID:15242785)
RGD
PMID:15242785
G
Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:2450311 (PMID:16537898)
RGD
PMID:16537898
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
G
Vit
vitrin
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:18757743)
GO_Central RGD
PMID:18757743
GO_REF:0000033
NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665
G
Vtn
vitronectin
acts_upstream_of_or_within
ISO
(PMID:18757743)
RGD
PMID:18757743
NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
G
Vwa1
von Willebrand factor A domain containing 1
acts_upstream_of_or_within
ISO
MGI:3809230 (PMID:18757743), (PMID:19279005)
RGD
PMID:18757743 PMID:19279005
NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
G
Wdr72
WD repeat domain 72
acts_upstream_of_or_within
ISO
(PMID:35181734)
RGD
PMID:35181734
NCBI chr 8:74,838,338...75,020,938
Ensembl chr 8:74,838,318...75,018,229
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:17943183)
RGD
PMID:17943183
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Dspp
dentin sialophosphoprotein
acts_upstream_of_or_within
ISO
MGI:2653208 (PMID:23900597)
RGD
PMID:23900597
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
G
Pbxip1
PBX homeobox interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3665440|MGI:6363079 (PMID:30659184)
Ensembl RGD
PMID:30659184
GO_REF:0000107
NCBI chr 2:174,856,339...174,868,922
Ensembl chr 2:174,856,397...174,868,919
G
Zfp469
zinc finger protein 469
acts_upstream_of_or_within
ISO
MGI:6765940 (PMID:34368841)
RGD
PMID:34368841
NCBI chr19:50,282,337...50,324,010
G
Col4a3
collagen type IV alpha 3 chain
involved_in
ISO
(PMID:12631063)
RGD
PMID:12631063
NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895
G
Col4a4
collagen type IV alpha 4 chain
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:17942953), (PMID:19675380) MGI:1857960 (PMID:10534397) GO_REF:0000033
RGD GO_Central
PMID:10534397 PMID:17942953 PMID:19675380
GO_REF:0000033
NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
G
Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:18480751)
RGD
PMID:18480751
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
G
Mpv17
mitochondrial inner membrane protein MPV17
involved_in
ISO
(PMID:16041630)
RGD
PMID:16041630
NCBI chr 6:25,221,668...25,236,241
Ensembl chr 6:25,222,896...25,236,244
G
Myo1e
myosin IE
involved_in
ISS ISO
GO_REF:0000024 (PMID:19005011)
UniProt RGD
PMID:19005011
GO_REF:0000024
NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
G
Nid1
nidogen 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2682959 (PMID:14566019)
Ensembl RGD
PMID:14566019
GO_REF:0000107
NCBI chr17:86,085,133...86,158,272
Ensembl chr17:86,085,077...86,158,267
G
Nphs1
NPHS1 adhesion molecule, nephrin
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
G
Sulf1
sulfatase 1
involved_in
IEA ISO IBA
GO_REF:0000107 UniProtKB:Q8CFG0 (PMID:21719793) GO_REF:0000033
Ensembl RGD GO_Central
PMID:21719793
GO_REF:0000033 GO_REF:0000107
NCBI chr 5:6,362,894...6,526,174
Ensembl chr 5:6,362,911...6,525,584
G
Sulf2
sulfatase 2
involved_in
IBA ISO
GO_REF:0000033 UniProtKB:Q8K007 (PMID:21719793)
GO_Central RGD
PMID:21719793
GO_REF:0000033
NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415
G
Wt1
WT1 transcription factor
involved_in
ISO IEA ISS
(PMID:19205749) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:19205749
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
G
Tex14
testis expressed 14, intercellular bridge forming factor
involved_in
ISS ISO IBA IEA
GO_REF:0000024 (PMID:16549803) GO_REF:0000033 GO_REF:0000002 GO_REF:0000107
UniProt RGD GO_Central InterPro Ensembl
PMID:16549803
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr10:72,231,766...72,356,938
Ensembl chr10:72,231,801...72,355,805
G
Lamb2
laminin subunit beta 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2138070 (PMID:16886065), (PMID:7670489)
Ensembl RGD
PMID:7670489 PMID:16886065
GO_REF:0000107
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
G
Chadl
chondroadherin-like
involved_in
ISO
(PMID:25451920)
RGD
PMID:25451920
NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
G
Emilin1
elastin microfibril interfacer 1
involved_in
ISO
(PMID:25056700)
RGD
PMID:25056700
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
G
Antxr1
ANTXR cell adhesion molecule 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5754386 (PMID:25572963)
Ensembl RGD
PMID:25572963
GO_REF:0000107
NCBI chr 4:119,590,770...119,778,232
Ensembl chr 4:119,590,771...119,778,232
G
Mir145
microRNA 145
acts_upstream_of involved_in
ISO
UniProtKB:P01137 (PMID:25323858) (PMID:25704091)
RGD
PMID:25323858 PMID:25704091
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
G
Mir18a
microRNA 18a
involved_in
ISO
(PMID:28131417)
RGD
PMID:28131417
NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
G
Mir19a
microRNA 19a
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Mir27b
microRNA 27b
acts_upstream_of
ISO
(PMID:28095798)
RGD
PMID:28095798
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Mir9-3
microRNA 9-3
acts_upstream_of
ISO
(PMID:26315535)
RGD
PMID:26315535
NCBI chr 1:133,440,049...133,440,138
G
Mir98
microRNA 98
acts_upstream_of
ISO
(PMID:28251559)
RGD
PMID:28251559
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
G
Pparg
peroxisome proliferator-activated receptor gamma
involved_in
ISO
(PMID:25704091)
RGD
PMID:25704091
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:30729664)
RGD
PMID:30729664
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
G
Adtrp
androgen-dependent TFPI-regulating protein
involved_in
ISO
(PMID:28341552)
RGD
PMID:28341552
NCBI chr17:22,907,758...22,993,834
Ensembl chr17:22,930,740...22,993,826
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:26491108)
RGD
PMID:26491108
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tnfrsf1a
TNF receptor superfamily member 1A
involved_in
ISO
UniProtKB:P25119 (PMID:26491108)
RGD
PMID:26491108
NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO
UniProtKB:P25118 (PMID:26491108)
RGD
PMID:26491108
NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
G
Cst3
cystatin C
involved_in
ISO
(PMID:10545518)
RGD
PMID:10545518
NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
G
Dpp4
dipeptidylpeptidase 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:16651416)
UniProt RGD
PMID:16651416
GO_REF:0000024
NCBI chr 3:46,962,233...47,043,870
Ensembl chr 3:46,962,243...47,043,901
G
Fap
fibroblast activation protein, alpha
involved_in
ISO
(PMID:16651416)
RGD
PMID:16651416
NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545
G
Mir98
microRNA 98
involved_in
ISO
(PMID:26587789)
RGD
PMID:26587789
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
G
Fap
fibroblast activation protein, alpha
involved_in
ISO
(PMID:10455171)
RGD
PMID:10455171
NCBI chr 3:47,138,823...47,207,671
Ensembl chr 3:47,138,813...47,225,545
G
Prickle1
prickle planar cell polarity protein 1
involved_in
IEA ISO
GO_REF:0000107 MGI:5645931 (PMID:33144400)
Ensembl RGD
PMID:33144400
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
G
Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
UniProtKB:Q86SQ0|UniProtKB:Q86UU1 (PMID:23940118)
RGD
PMID:23940118
NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
G
Dag1
dystroglycan 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Phldb1
pleckstrin homology-like domain, family B, member 1
involved_in
ISO IEA
UniProtKB:Q7Z460|UniProtKB:Q86SQ0 (PMID:23940118) GO_REF:0000107
RGD Ensembl
PMID:23940118
GO_REF:0000107
NCBI chr 8:45,003,543...45,051,541
Ensembl chr 8:45,003,538...45,051,522
G
Phldb2
pleckstrin homology-like domain, family B, member 2
involved_in
ISO
UniProtKB:Q7Z460|UniProtKB:Q86UU1 (PMID:23940118)
RGD
PMID:23940118
NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
G
Colgalt1
collagen beta(1-O)galactosyltransferase 1
involved_in
ISO
(PMID:27402836)
RGD
PMID:27402836
NCBI chr16:18,319,796...18,332,106
Ensembl chr16:18,319,795...18,332,106
G
Efemp2
EGF containing fibulin extracellular matrix protein 2
involved_in
ISO
(PMID:26178373), (PMID:26220971), (PMID:26711913)
RGD
PMID:26178373 PMID:26220971 PMID:26711913
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
G
Rb1
RB transcriptional corepressor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:29304157)
Ensembl RGD
PMID:29304157
GO_REF:0000107
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
G
Tnxb
tenascin XB
involved_in
ISO
(PMID:17033827)
RGD
PMID:17033827
G
Agt
angiotensinogen
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:30729664)
Ensembl RGD
PMID:30729664
GO_REF:0000107
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Emilin1
elastin microfibril interfacer 1
involved_in
ISO
(PMID:25056700)
RGD
PMID:25056700
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
G
Mad2l2
mitotic arrest deficient 2 like 2
IMP
RGD
PMID:27488450
RGD:152995505
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mir27b
microRNA 27b
acts_upstream_of
ISO
(PMID:30729664)
RGD
PMID:30729664
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:21307346)
RGD
PMID:21307346
NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
G
Smad3
SMAD family member 3
involved_in acts_upstream_of
ISO
(PMID:21307346) (PMID:30729664)
RGD
PMID:21307346 PMID:30729664
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:26747772)
Ensembl RGD
PMID:26747772
GO_REF:0000107
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2176205|MGI:2385468 (PMID:20881014)
RGD
PMID:20881014
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of
ISO
(PMID:24279830)
RGD
PMID:24279830
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfbr1
transforming growth factor, beta receptor 1
acts_upstream_of involved_in
ISO IEA
(PMID:28251559) GO_REF:0000107
RGD Ensembl
PMID:28251559
GO_REF:0000107
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Agt
angiotensinogen
IDA
RGD
PMID:21419085
RGD:5129171
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Cpb2
carboxypeptidase B2
IMP
RGD
PMID:23369837
RGD:7243115
NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
G
Ier3ip1
immediate early response 3 interacting protein 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr18:70,474,978...70,486,062
Ensembl chr18:70,474,926...70,526,470
G
Ier3ip1-ps1
immediate early response 3 interacting protein 1, pseudogene 1
involved_in
ISO
(PMID:33122427)
RGD
PMID:33122427
NCBI chr 4:132,342,131...132,342,625
Ensembl chr 4:132,332,180...132,342,316
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:19158077)
RGD
PMID:19158077
NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
G
Carmil2
capping protein regulator and myosin 1 linker 2
involved_in
ISO
(PMID:26466680), (PMID:26578515)
RGD
PMID:26466680 PMID:26578515
NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
G
Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
(PMID:24859005)
RGD
PMID:24859005
NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:24859005)
RGD
PMID:24859005
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
G
Ddr2
discoidin domain receptor tyrosine kinase 2
involved_in
ISO
(PMID:11723120)
RGD
PMID:11723120
NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
G
Fscn1
fascin actin-bundling protein 1
involved_in
ISO IEA ISS
(PMID:20137952) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20137952
GO_REF:0000024 GO_REF:0000107
NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
G
Il6
interleukin 6
involved_in
ISO
(PMID:26587789)
RGD
PMID:26587789
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Meltf
melanotransferrin
involved_in
ISO
(PMID:16713448)
RGD
PMID:16713448
NCBI chr11:68,884,446...68,906,300
Ensembl chr11:68,884,446...68,906,300
G
Pdpn
podoplanin
involved_in
ISS ISO
GO_REF:0000024 (PMID:25486435)
UniProt RGD
PMID:25486435
GO_REF:0000024
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(PMID:21984612)
RGD
PMID:21984612
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
IMP
RGD
PMID:19846571
RGD:8693597
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Cflar
CASP8 and FADD-like apoptosis regulator
IMP
RGD
PMID:24691542
RGD:11341715
NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
G
Cyp2j4
cytochrome P450, family 2, subfamily j, polypeptide 4
IMP
RGD
PMID:29656108
RGD:150520032
NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
G
Rb1
RB transcriptional corepressor 1
involved_in
ISO
(PMID:29304157)
RGD
PMID:29304157
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
G
Aebp1
AE binding protein 1
involved_in
ISO IEA ISS
(PMID:29606302) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:29606302
GO_REF:0000024 GO_REF:0000107
NCBI chr14:80,738,800...80,748,878
Ensembl chr14:80,738,892...80,748,877
G
Col6a1
collagen type VI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:2153356 (PMID:20951202)
RGD
PMID:20951202
NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597
G
Efemp2
EGF containing fibulin extracellular matrix protein 2
involved_in
ISO
(PMID:26690653)
RGD
PMID:26690653
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
G
Agt
angiotensinogen
involved_in
ISO
UniProtKB:P00797 (PMID:17416596)
RGD
PMID:17416596
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Has2
hyaluronan synthase 2
IMP
RGD
PMID:27094859
RGD:12910548
NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:21311046)
RGD
PMID:21311046
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tie1
tyrosine kinase with immunoglobulin-like and EGF-like domains 1
acts_upstream_of
ISO
(PMID:31319059)
RGD
PMID:31319059
NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
G
Ric1
RIC1 homolog, RAB6A GEF complex partner 1
involved_in
ISO
(PMID:31932796)
RGD
PMID:31932796
NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863
G
Ddr1
discoidin domain receptor tyrosine kinase 1
involved_in
ISO IEA ISS
(PMID:12065315) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:12065315
GO_REF:0000024 GO_REF:0000107
NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
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Ets1
ETS proto-oncogene 1, transcription factor
IMP
RGD
PMID:16738537
RGD:2313717
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
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Fgfr4
fibroblast growth factor receptor 4
involved_in
ISO IEA ISS
(PMID:20876804) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20876804
GO_REF:0000024 GO_REF:0000107
NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:87860 (PMID:20980600)
RGD
PMID:20980600
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:87859 (PMID:20980600)
RGD
PMID:20980600
NCBI chr13:68,673,702...68,770,846
Ensembl chr13:68,673,722...68,839,742
G
Angptl7
angiopoietin like 7
involved_in
ISO
(PMID:21199193)
RGD
PMID:21199193
NCBI chr 5:158,932,096...158,937,281
Ensembl chr 5:158,932,794...158,937,324
G
Axin2
axin 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:28069701)
Ensembl RGD
PMID:28069701
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Itgb3
integrin subunit beta 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2175913 (PMID:22984613)
Ensembl RGD
PMID:22984613
GO_REF:0000107
NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
G
Lemd3
LEM domain containing 3
acts_upstream_of_or_within
ISO
MGI:3703328 (PMID:16943282)
RGD
PMID:16943282
NCBI chr 7:56,415,053...56,499,047
Ensembl chr 7:56,305,448...56,502,474
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Mir21
microRNA 21
acts_upstream_of
ISO
(PMID:18591254)
RGD
PMID:18591254
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Prdm5
PR/SET domain 5
involved_in
ISO
(PMID:21664999)
RGD
PMID:21664999
NCBI chr 4:95,075,736...95,237,921
Ensembl chr 4:95,075,768...95,238,301
G
Reck
reversion-inducing-cysteine-rich protein with kazal motifs
involved_in
ISO
(PMID:18591254)
RGD
PMID:18591254
NCBI chr 5:58,102,961...58,169,516
Ensembl chr 5:58,102,981...58,169,502
G
Slc2a10
solute carrier family 2 member 10
acts_upstream_of_or_within
ISO
(PMID:26376865)
RGD
PMID:26376865
NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
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Tcf15
transcription factor 15
acts_upstream_of_or_within
ISO
MGI:1929775 (PMID:24038871)
RGD
PMID:24038871
NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
G
Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within
ISO
MGI:1888389 (PMID:21780244)
RGD
PMID:21780244
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Zfp469
zinc finger protein 469
involved_in
ISO
(PMID:21664999)
RGD
PMID:21664999
NCBI chr19:50,282,337...50,324,010
G
Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:1934258 (PMID:17881493)
RGD
PMID:17881493
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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