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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of circadian rhythm
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Accession:GO:0042752 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.


show annotations for term's descendants           Sort by:
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (PMID:24048828) RGD PMID:24048828 NCBI chr14:86,125,119...86,234,459
Ensembl chr14:86,124,850...86,261,075 		JBrowse link
G Atg7 autophagy related 7 involved_in ISS
ISO 		GO_REF:0000024
(PMID:29937374) 		UniProt
RGD		 PMID:29937374 GO_REF:0000024 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISS
ISO 		GO_REF:0000024
(PMID:30012868) 		UniProt
RGD		 PMID:30012868 GO_REF:0000024 NCBI chr 4:143,174,450...143,180,150
Ensembl chr 4:143,174,048...143,180,783 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO
IEA 		(PMID:15917222)
GO_REF:0000107 		RGD
Ensembl		 PMID:15917222 GO_REF:0000107 NCBI chr 1:254,159,085...254,324,819
Ensembl chr 1:254,159,124...254,328,357 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:23398316) 		Ensembl
RGD		 PMID:23398316 GO_REF:0000107 NCBI chr15:51,622,519...51,637,911
Ensembl chr15:51,622,464...51,637,774 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:27238018) 		UniProt
Ensembl
RGD		 PMID:27238018 GO_REF:0000024 GO_REF:0000107 NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,265,289...19,280,455 		JBrowse link
G Clock clock circadian regulator involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:30012868)
GO_REF:0000117
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:30012868 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:32,262,750...32,346,872 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO 		GO_REF:0000024
UniProtKB:Q9R194 (PMID:10217146), (PMID:19833968), (PMID:21236481), (PMID:23575670), (PMID:23616524), (PMID:26431207) 		UniProt
RGD		 PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... GO_REF:0000024 NCBI chr 7:20,417,526...20,481,791
Ensembl chr 7:20,417,107...20,481,822 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
UniProtKB:P97784 (PMID:10217146), (PMID:23575670), (PMID:23616524)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:10217146 PMID:23575670 PMID:23616524 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:98,830,479...98,860,437
Ensembl chr 3:98,830,483...98,860,447 		JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:19414593), (PMID:21930935)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:19414593 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr10:106,713,497...106,754,953
Ensembl chr10:106,694,279...106,754,953 		JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in IEA
ISO 		GO_REF:0000107
(PMID:21930935) 		Ensembl
RGD		 PMID:21930935 GO_REF:0000107 NCBI chr 7:112,863,726...112,887,338
Ensembl chr 7:112,863,731...112,884,101 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:26431207) 		UniProt
RGD		 PMID:26431207 GO_REF:0000024 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:216,677,810...216,703,596 		JBrowse link
G Drd4 dopamine receptor D4 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24048828)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24048828 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:205,825,937...205,829,124
Ensembl chr 1:205,826,049...205,830,458 		JBrowse link
G ENSRNOG00000069573 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO
IEA 		(PMID:16717091)
GO_REF:0000107 		RGD
Ensembl		 PMID:16717091 GO_REF:0000107 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:77,624,223...77,687,183 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (PMID:17463251)
(PMID:17462724), (PMID:17463252), (PMID:23616524) 		RGD PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 NCBI chr15:86,321,504...86,341,387
Ensembl chr15:86,321,504...86,341,387 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:27238018)
GO_REF:0000117
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:27238018 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:172,447,738...172,609,591 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO 		GO_REF:0000024
(PMID:28556462) 		UniProt
RGD		 PMID:28556462 GO_REF:0000024 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:26776516)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:26776516 GO_REF:0000024 GO_REF:0000107 NCBI chr18:30,021,847...30,041,061
Ensembl chr18:30,021,941...30,041,025 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:30530698)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:30530698 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:172,606,220...172,667,758 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24423872) 		UniProt
Ensembl
RGD		 PMID:24423872 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,919,739...9,938,066 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19217292) 		UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:47,457,554...47,472,961 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO
IEA 		(PMID:26037310)
GO_REF:0000107 		RGD
Ensembl		 PMID:26037310 GO_REF:0000107 NCBI chr 1:211,041,859...211,125,749
Ensembl chr 1:211,041,885...211,084,479 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in IMP PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 7:71,352,612...71,358,680
Ensembl chr 7:71,350,573...71,358,948 		JBrowse link
G Maged1 MAGE family member D1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:20300063) 		Ensembl
RGD		 PMID:20300063 GO_REF:0000107 NCBI chr  X:63,416,464...63,423,167
Ensembl chr  X:63,416,466...63,423,112 		JBrowse link
G Magel2 MAGE family member L2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:22208286) 		Ensembl
RGD		 PMID:22208286 GO_REF:0000107 NCBI chr 1:125,292,033...125,296,575
Ensembl chr 1:125,292,033...125,296,575 		JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO 		GO_REF:0000024
(PMID:22441692) 		UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr14:6,802,247...7,094,103
Ensembl chr14:6,802,295...7,094,100 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISS
ISO 		GO_REF:0000024
(PMID:22441692) 		UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:22441692)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22441692 GO_REF:0000024 GO_REF:0000107 NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,670,756...34,712,228 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:29750810)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:29750810 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435 		JBrowse link
G Noct nocturnin involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:22073225)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22073225 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:137,422,074...137,442,282
Ensembl chr 2:137,422,074...137,442,282 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:22966205)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22966205 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:70,594,116...70,611,976
Ensembl chr  X:70,593,888...70,611,979 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in IEA
ISO 		GO_REF:0000117
(PMID:24048828) 		UniProt
RGD		 PMID:24048828 GO_REF:0000117 NCBI chr 9:48,959,225...49,138,036
Ensembl chr 9:48,959,148...49,138,037 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IDA
ISO
IEA 		PMID:22425774
(PMID:19721697), (PMID:20159955), (PMID:29533925)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:19721697 PMID:20159955 PMID:29533925 PMID:22425774 GO_REF:0000107 GO_REF:0000117, RGD:8553819 NCBI chr10:84,224,599...84,231,812
Ensembl chr10:84,224,540...84,231,812 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23221024), (PMID:29533925)
GO_REF:0000117
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23221024 PMID:29533925 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr15:9,955,034...9,981,329
Ensembl chr15:9,954,906...9,981,330 		JBrowse link
G Opn4 opsin 4 involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:12808468)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:12808468 GO_REF:0000024 GO_REF:0000033 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,926,902...9,949,928 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:11395012) 		UniProt
RGD		 PMID:11395012 GO_REF:0000024 NCBI chr10:54,299,002...54,313,804
Ensembl chr10:54,302,641...54,314,211 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:11395012), (PMID:19917250) 		UniProt
RGD		 PMID:11395012 PMID:19917250 GO_REF:0000024 NCBI chr 9:99,454,828...99,497,069
Ensembl chr 9:99,454,830...99,496,993 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA
ISO 		GO_REF:0000107
(PMID:22274616) 		Ensembl
RGD		 PMID:22274616 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:67,523,164...67,576,083 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:20159955)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:20159955 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISS
ISO 		GO_REF:0000024
(PMID:19041764) 		UniProt
RGD		 PMID:19041764 GO_REF:0000024 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:150,095,787...150,221,104 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO 		GO_REF:0000024
(PMID:17476214) 		UniProt
RGD		 PMID:17476214 GO_REF:0000024 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:63,273,189...63,729,213 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO
IBA
IEA 		GO_REF:0000024
(PMID:21712997), (PMID:21930935)
GO_REF:0000033
GO_REF:0000107 		UniProt
RGD
GO_Central
Ensembl		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:210,914,567...210,918,193 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:21712997), (PMID:21930935)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:29,681,099...29,712,835
Ensembl chr 6:29,681,100...29,712,924 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
IBA
IEA 		GO_REF:0000024
(PMID:21712997), (PMID:21930935)
GO_REF:0000033
GO_REF:0000107 		UniProt
RGD
GO_Central
Ensembl		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr12:40,043,822...40,061,301
Ensembl chr12:40,043,822...40,061,341 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19833968)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:19833968 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:55,967,351...56,003,450 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:19833968)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:19833968 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:125,036,945...125,109,010
Ensembl chr 5:125,042,179...125,108,324 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23185022)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23185022 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:74,748,272...74,777,611
Ensembl chr 1:74,748,272...74,774,814 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA
ISO 		GO_REF:0000107
(PMID:24158435) 		Ensembl
RGD		 PMID:24158435 GO_REF:0000107 NCBI chr11:98,544,952...98,762,499
Ensembl chr11:98,544,954...98,762,108 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA 		(PMID:23723244)
GO_REF:0000107 		RGD
Ensembl		 PMID:23723244 GO_REF:0000107 NCBI chr13:104,196,615...104,251,007
Ensembl chr13:104,200,378...104,250,975 		JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:22966205)
GO_REF:0000117
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:22966205 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr15:34,941,445...35,027,460
Ensembl chr15:34,967,477...35,026,828 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:23172836) 		UniProt
RGD		 PMID:23172836 GO_REF:0000024 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:45,407,965...45,502,771 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:23172836) RGD PMID:23172836 NCBI chr 8:78,182,710...78,915,730
Ensembl chr 8:78,182,620...78,915,730 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17303680)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17303680 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:225,790,216...225,970,973
Ensembl chr 1:225,790,216...225,970,973 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in IEA
ISO 		GO_REF:0000107
(PMID:22966205)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:22966205 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:144,621,678...144,637,930
Ensembl chr 5:144,622,476...144,637,926 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:26392558)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:26392558 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:145,063,847...145,081,675
Ensembl chr 2:145,063,857...145,081,873 		JBrowse link
G Sirt6 sirtuin 6 involved_in IEA
ISO 		GO_REF:0000107
(PMID:30782483) 		Ensembl
RGD		 PMID:30782483 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,732,974...8,738,542 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) RGD PMID:26392558 NCBI chr 8:106,416,039...106,489,271
Ensembl chr 8:106,416,040...106,489,271 		JBrowse link
G Srrd SRR1 domain containing involved_in ISO (PMID:28802827) RGD PMID:28802827 NCBI chr12:49,955,081...49,960,693
Ensembl chr12:49,954,882...49,963,366 		JBrowse link
G Tardbp TAR DNA binding protein involved_in IEA
ISO 		GO_REF:0000107
(PMID:27123980) 		Ensembl
RGD		 PMID:27123980 GO_REF:0000107 NCBI chr 5:164,330,452...164,348,435
Ensembl chr 5:164,334,924...164,345,204 		JBrowse link
G Timeless timeless circadian regulator involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23418588)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23418588 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:1,239,450...1,263,337 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24321095)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24321095 GO_REF:0000024 GO_REF:0000107 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:84,441,954...84,473,366 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO
IEA 		(PMID:24728990)
GO_REF:0000117 		RGD
UniProt		 PMID:24728990 GO_REF:0000117 NCBI chr 1:119,204,244...119,297,097
Ensembl chr 1:119,206,148...119,297,097 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:27123980)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:27123980 GO_REF:0000024 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:7,367,604...7,432,013 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO
IEA 		(PMID:29626158)
GO_REF:0000107 		RGD
Ensembl		 PMID:29626158 GO_REF:0000107 NCBI chr  X:12,261,633...12,399,780
Ensembl chr  X:12,261,633...12,369,491 		JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2159013 (PMID:12451142) RGD PMID:12451142 NCBI chr20:25,529,528...25,529,977
Ensembl chr20:25,528,906...25,530,368 		JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:214,996,180...215,012,136
Ensembl chr 1:214,995,872...215,020,602 		JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10095082 RGD:632379 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:32,262,750...32,346,872 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3838359 (PMID:19217292) RGD PMID:19217292 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:47,457,554...47,472,961 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:4421807 (PMID:20080691) 		Ensembl
RGD		 PMID:20080691 GO_REF:0000107 NCBI chr13:22,823,132...23,045,619
Ensembl chr13:22,823,132...23,045,619 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
(PMID:22920256) 		Ensembl
RGD		 PMID:22920256 GO_REF:0000107 NCBI chr 8:109,301,290...109,303,226
Ensembl chr 8:109,301,290...109,303,226 		JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:102,323,647...102,330,639
Ensembl chr10:102,326,135...102,330,635 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (PMID:26392540) RGD PMID:26392540 NCBI chr20:25,529,528...25,529,977
Ensembl chr20:25,528,906...25,530,368 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISO (PMID:18411297) RGD PMID:18411297 NCBI chr 4:143,174,450...143,180,150
Ensembl chr 4:143,174,048...143,180,783 		JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23993098)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr16:19,022,171...19,080,880
Ensembl chr16:19,022,005...19,080,880 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:23616524)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:20,417,526...20,481,791
Ensembl chr 7:20,417,107...20,481,822 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA
IBA 		GO_REF:0000024
(PMID:23616524)
GO_REF:0000107
GO_REF:0000033 		UniProt
RGD
Ensembl
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:98,830,479...98,860,437
Ensembl chr 3:98,830,483...98,860,447 		JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 involved_in IBA
ISO
IEA 		GO_REF:0000033
(PMID:23452855), (PMID:23452856)
GO_REF:0000117
GO_REF:0000107 		GO_Central
RGD
UniProt
Ensembl		 PMID:23452855 PMID:23452856 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr17:8,063,731...8,082,920
Ensembl chr17:8,066,565...8,078,644 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in IBA
ISO
IEA 		GO_REF:0000033
(PMID:23452855), (PMID:23452856), (PMID:23616524)
GO_REF:0000117 		GO_Central
RGD
UniProt		 PMID:23452855 PMID:23452856 PMID:23616524 GO_REF:0000033 GO_REF:0000117 NCBI chr15:86,321,504...86,341,387
Ensembl chr15:86,321,504...86,341,387 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19217292) 		UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:47,469,162...47,470,995
Ensembl chr 6:47,457,554...47,472,961 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:24089055) 		UniProt
RGD		 PMID:24089055 GO_REF:0000024 NCBI chr 6:137,999,845...138,038,696
Ensembl chr 6:137,999,915...138,038,696 		JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 acts_upstream_of_or_within IEA
ISO 		GO_REF:0000107
MGI:3574037 (PMID:15741322) 		Ensembl
RGD		 PMID:15741322 GO_REF:0000107 NCBI chr16:18,080,003...18,087,449
Ensembl chr16:18,080,003...18,087,449 		JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (PMID:26320947) RGD PMID:26320947 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,926,902...9,949,928 		JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:26392540), (PMID:30240620), (PMID:31607531) RGD PMID:26392540 PMID:30240620 PMID:31607531 NCBI chr 9:25,865,610...25,913,315
Ensembl chr 9:25,865,610...25,913,315 		JBrowse link
G Pde6b phosphodiesterase 6B involved_in IEA
ISO 		GO_REF:0000107
(PMID:30240620) 		Ensembl
RGD		 PMID:30240620 GO_REF:0000107 NCBI chr14:1,468,302...1,511,435
Ensembl chr14:1,468,302...1,511,435 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO
IBA 		GO_REF:0000024
(PMID:15888647)
GO_REF:0000033 		UniProt
RGD
GO_Central		 PMID:15888647 GO_REF:0000024 GO_REF:0000033 NCBI chr10:54,299,002...54,313,804
Ensembl chr10:54,302,641...54,314,211 		JBrowse link
G Per2 period circadian regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:99,454,828...99,497,069
Ensembl chr 9:99,454,830...99,496,993 		JBrowse link
G Per3 period circadian regulator 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:166,740,914...166,778,243
Ensembl chr 5:166,743,050...166,777,999 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA
ISO 		GO_REF:0000107
(PMID:22274616) 		Ensembl
RGD		 PMID:22274616 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:67,523,164...67,576,083 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21712997)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21712997 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:210,914,567...210,918,193 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO 		GO_REF:0000024
(PMID:21712997) 		UniProt
RGD		 PMID:21712997 GO_REF:0000024 NCBI chr 6:29,681,099...29,712,835
Ensembl chr 6:29,681,100...29,712,924 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21712997)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21712997 GO_REF:0000024 GO_REF:0000107 NCBI chr12:40,043,822...40,061,301
Ensembl chr12:40,043,822...40,061,341 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in IEA GO_REF:0000107
GO_REF:0000117 		Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:211,476,298...211,535,077
Ensembl chr 1:211,523,972...211,535,065 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:17264215) RGD PMID:17264215 NCBI chr 1:211,507,845...211,516,907
Ensembl chr 1:211,506,343...211,516,891 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17264215)
GO_REF:0000117 		UniProt
RGD		 PMID:17264215 GO_REF:0000024 GO_REF:0000117 NCBI chr 1:211,477,337...211,487,428 JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23993098)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,947,104...9,958,729
Ensembl chr20:9,947,105...9,958,698 		JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:24051492)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:24051492 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23213472)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23213472 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:53,308,264...53,336,800
Ensembl chr 8:53,308,303...53,336,794 		JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK-interacting pacemaker involved_in IEA
ISO 		GO_REF:0000002
(PMID:17310242)
GO_REF:0000107 		InterPro
RGD
Ensembl		 PMID:17310242 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:112,325,980...112,344,692
Ensembl chr 6:112,325,671...112,344,692 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:17310242), (PMID:19605937) 		UniProt
RGD		 PMID:17310242 PMID:19605937 GO_REF:0000024 NCBI chr 7:20,417,526...20,481,791
Ensembl chr 7:20,417,107...20,481,822 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19605937)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:19605937 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:98,830,479...98,860,437
Ensembl chr 3:98,830,483...98,860,447 		JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO
IBA 		(PMID:25936801)
GO_REF:0000033 		RGD
GO_Central		 PMID:25936801 GO_REF:0000033 NCBI chr  X:154,662,718...154,684,001
Ensembl chr  X:154,662,727...154,683,998 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:19605937) 		UniProt
RGD		 PMID:19605937 GO_REF:0000024 NCBI chr 9:99,454,828...99,497,069
Ensembl chr 9:99,454,830...99,496,993 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO
IEA 		(PMID:28903391)
GO_REF:0000117 		RGD
UniProt		 PMID:28903391 GO_REF:0000117 NCBI chr15:51,841,104...51,907,729
Ensembl chr15:51,841,405...51,907,819 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in IEA
ISO 		GO_REF:0000107
(PMID:21680841) 		Ensembl
RGD		 PMID:21680841 GO_REF:0000107 NCBI chr 5:144,621,678...144,637,930
Ensembl chr 5:144,622,476...144,637,926 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in IEA
ISO 		GO_REF:0000107
(PMID:21680841) 		Ensembl
RGD		 PMID:21680841 GO_REF:0000107 NCBI chr 8:66,377,471...66,432,150
Ensembl chr 8:66,381,657...66,434,542 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP RGD PMID:19066225 RGD:5128864 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:172,818,176...172,842,293 		JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:19491711 RGD:2317916 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:48,213,273...48,247,190 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO
IEA 		(PMID:18329818)
GO_REF:0000107 		RGD
Ensembl		 PMID:18329818 GO_REF:0000107 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:148,421,315...148,425,969 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:48,213,273...48,247,190 		JBrowse link
G Drd1 dopamine receptor D1 IDA RGD PMID:12944496 RGD:1581422 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,545,111...10,567,166 		JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:12944496 RGD:1581422 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:249,264,985...249,409,846 		JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor IMP RGD PMID:16982424 RGD:10412019 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:121,474,099...121,591,215 		JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:19605937), (PMID:22653727)
GO_REF:0000107
(PMID:23229515) 		UniProt
RGD
Ensembl		 PMID:19605937 PMID:22653727 PMID:23229515 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,766,222...176,864,741
Ensembl chr 1:176,829,305...176,864,739 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in ISO
IEA 		(PMID:12738229)
(PMID:19605937)
GO_REF:0000107 		RGD
Ensembl		 PMID:12738229 PMID:19605937 GO_REF:0000107 NCBI chr 4:181,429,097...181,478,384
Ensembl chr 4:181,430,159...181,478,382 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA
ISO 		GO_REF:0000107
(PMID:18782782)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:18782782 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:254,159,085...254,324,819
Ensembl chr 1:254,159,124...254,328,357 		JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA 		(PMID:12738229), (PMID:23229515)
(PMID:22653727)
GO_REF:0000107 		RGD
Ensembl		 PMID:12738229 PMID:22653727 PMID:23229515 GO_REF:0000107 NCBI chr14:32,262,747...32,346,872
Ensembl chr14:32,262,750...32,346,872 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18782782)
GO_REF:0000117 		Ensembl
RGD
UniProt		 PMID:18782782 GO_REF:0000107 GO_REF:0000117 NCBI chr10:17,737,181...17,834,834
Ensembl chr10:17,720,444...17,834,834 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:31294688)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:31294688 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:212,325,090...212,332,587 		JBrowse link
G Mtnr1b melatonin receptor 1B IDA RGD PMID:12643943 RGD:9588678 NCBI chr 8:20,919,593...20,934,109
Ensembl chr 8:20,919,593...20,934,109 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:22356123)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:22356123 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:79,731,677...79,735,952
Ensembl chr 6:79,731,677...79,736,441 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IDA RGD PMID:18946026 RGD:10448985 NCBI chr10:84,224,599...84,231,812
Ensembl chr10:84,224,540...84,231,812 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:12930792 RGD:7777105 NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:237,823,053...239,103,005 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:22753030) RGD PMID:22753030 NCBI chr 8:78,182,710...78,915,730
Ensembl chr 8:78,182,620...78,915,730 		JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (PMID:22753030) RGD PMID:22753030 NCBI chr 2:184,698,779...184,723,942
Ensembl chr 2:184,698,818...184,724,566 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24043798) 		UniProt
Ensembl
RGD		 PMID:24043798 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:143,729,821...143,772,105
Ensembl chr 5:143,730,596...143,771,983 		JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:14564007 RGD:734503 NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:1,239,450...1,263,337 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin IDA RGD PMID:9748091 RGD:1625449 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,891,582...17,911,865 		JBrowse link
G Casp1 caspase 1 IMP RGD PMID:16455762 RGD:2315921 NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:10,746,333...10,882,275 		JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:19889861 PMID:20237285 RGD:2325188, RGD:10401262 NCBI chr 3:166,412,763...166,432,519
Ensembl chr 3:166,412,764...166,431,880 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor IMP RGD PMID:20237285 RGD:10401262 NCBI chr 4:85,830,345...85,863,127
Ensembl chr 4:85,830,486...85,863,127 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO
IEA 		(PMID:18329818)
GO_REF:0000107 		RGD
Ensembl		 PMID:18329818 GO_REF:0000107 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:148,421,315...148,425,969 		JBrowse link
G Mtnr1b melatonin receptor 1B IDA
IMP 		RGD PMID:19429170 PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 8:20,919,593...20,934,109
Ensembl chr 8:20,919,593...20,934,109 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:16378653 RGD:1642507 NCBI chr 2:170,200,027...170,210,286
Ensembl chr 2:170,200,027...170,210,448 		JBrowse link
G Ptgdr prostaglandin D2 receptor IMP RGD PMID:17093043 RGD:628359286 NCBI chr15:19,790,499...19,797,873
Ensembl chr15:19,790,499...19,797,873 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:249,264,985...249,409,846 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:56,062,890...56,074,135 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) RGD PMID:15538933 NCBI chr 3:166,412,763...166,432,519
Ensembl chr 3:166,412,764...166,431,880 		JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:12964948 RGD:1642489 NCBI chr 7:24,399,404...24,400,720
Ensembl chr 7:24,399,404...24,400,720 		JBrowse link
G Ptgdr prostaglandin D2 receptor IMP RGD PMID:17093043 RGD:628359286 NCBI chr15:19,790,499...19,797,873
Ensembl chr15:19,790,499...19,797,873 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:166,725,471...166,739,063
Ensembl chr 5:166,733,671...166,739,059 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,936,398...106,937,558
Ensembl chr10:106,932,325...106,938,056 		JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr20:13,315,270...13,332,802
Ensembl chr20:13,315,270...13,332,802 		JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (PMID:26320947) RGD PMID:26320947 NCBI chr16:9,926,638...9,935,810
Ensembl chr16:9,926,902...9,949,928 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:23716671) 		UniProt
RGD		 PMID:23716671 GO_REF:0000024 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984 		JBrowse link
G Nps neuropeptide S IDA RGD PMID:22300983 RGD:9831203 NCBI chr 1:199,505,772...199,510,915
Ensembl chr 1:199,506,899...199,510,680 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:166,725,471...166,739,063
Ensembl chr 5:166,733,671...166,739,059 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,936,398...106,937,558
Ensembl chr10:106,932,325...106,938,056 		JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS 		GO_REF:0000107
(PMID:30792350)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:30792350 GO_REF:0000024 GO_REF:0000107 NCBI chr10:84,224,599...84,231,812
Ensembl chr10:84,224,540...84,231,812 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:32,989,215...32,991,794
Ensembl chr 2:32,989,215...32,999,712 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:15215293) RGD PMID:15215293 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:177,479,091...177,491,326 		JBrowse link
G Il18 interleukin 18 involved_in TAS PMID:11506998 UniProt PMID:11506998 RGD:8554500 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286 		JBrowse link
G Il6 interleukin 6 IMP RGD PMID:12667648 RGD:1358315 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17925011) 		Ensembl
RGD		 PMID:17925011 GO_REF:0000107 NCBI chr 2:197,392,746...197,406,606
Ensembl chr 2:197,392,698...197,407,519 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:34798058) 		UniProt
RGD		 PMID:34798058 GO_REF:0000024 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:94,839,433...94,871,567 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:32,989,215...32,991,794
Ensembl chr 2:32,989,215...32,999,712 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:15215293) RGD PMID:15215293 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:177,479,091...177,491,326 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in IEP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:11038259 GO_REF:0000033, RGD:631747 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:172,818,176...172,842,293 		JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:25083013) 		UniProt
RGD		 PMID:25083013 GO_REF:0000024 NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:265,766,079...265,849,237 		JBrowse link
G Cort cortistatin IDA RGD PMID:8622767 RGD:727760 NCBI chr 5:164,843,682...164,845,796 JBrowse link
G Csf2 colony stimulating factor 2 IMP RGD PMID:12047622 RGD:10449529 NCBI chr10:38,887,692...38,889,673
Ensembl chr10:38,887,692...38,890,031 		JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:15913875 RGD:1625069 NCBI chr11:70,385,586...70,437,793
Ensembl chr11:70,385,586...70,446,760 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:32893934) 		UniProt
RGD		 PMID:32893934 GO_REF:0000024 NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:118,811,980...118,867,027 		JBrowse link
G Nmu neuromedin U involved_in IDA PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr14:32,198,789...32,226,397
Ensembl chr14:32,198,943...32,226,632 		JBrowse link
G Per3 period circadian regulator 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630) 		UniProt
RGD		 PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... GO_REF:0000024 NCBI chr 5:166,740,914...166,778,243
Ensembl chr 5:166,743,050...166,777,999 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEP RGD PMID:11145837 RGD:724610 NCBI chr 1:87,659,863...87,665,048
Ensembl chr 1:87,651,271...87,665,048 		JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISS
ISO
IEA 		PMID:10781097
(PMID:10781097)
GO_REF:0000107 		RGD
Ensembl		 PMID:10781097 PMID:10781097 GO_REF:0000107, RGD:8553735 NCBI chr 3:28,680,044...28,682,978
Ensembl chr 3:28,680,044...28,682,978 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:32,989,215...32,991,794
Ensembl chr 2:32,989,215...32,999,712 		JBrowse link
G Hcrtr2 hypocretin receptor 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:12797957)
(PMID:11282968) 		UniProt
RGD		 PMID:11282968 PMID:12797957 GO_REF:0000024 NCBI chr 8:85,870,279...85,986,405
Ensembl chr 8:85,870,279...85,986,405 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:249,264,985...249,409,846 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:56,062,890...56,074,135 		JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:29750810)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:29750810 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:164,167,928...164,277,435 		JBrowse link
G Oprl1 opioid related nociceptin receptor 1 IMP RGD PMID:16310969 RGD:9835023 NCBI chr 3:189,209,495...189,225,406
Ensembl chr 3:189,212,175...189,217,426 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) RGD PMID:26232227 NCBI chr19:52,789,146...53,795,664
Ensembl chr19:53,551,488...53,795,664 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    regulation of biological process 12936
      regulation of circadian rhythm 133
        entrainment of circadian clock + 31
        negative regulation of circadian rhythm + 15
        positive regulation of circadian rhythm + 30
        regulation of circadian sleep/wake cycle + 38
        regulation of locomotor rhythm + 4
        temperature compensation of the circadian clock 0
Path 2
Term Annotations click to browse term
  biological_process 19315
    rhythmic process 430
      circadian rhythm 283
        regulation of circadian rhythm 133
          entrainment of circadian clock + 31
          negative regulation of circadian rhythm + 15
          positive regulation of circadian rhythm + 30
          regulation of circadian sleep/wake cycle + 38
          regulation of locomotor rhythm + 4
          temperature compensation of the circadian clock 0
paths to the root