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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of circadian rhythm
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Accession:GO:0042752 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.


show annotations for term's descendants           Sort by:
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (PMID:24048828) RGD PMID:24048828 NCBI chr14:86,125,119...86,234,459
Ensembl chr14:81,911,099...82,028,969 		JBrowse link
G Atg7 autophagy related 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29937374)		 UniProt
RGD		 PMID:29937374 GO_REF:0000024 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISS
ISO		 GO_REF:0000024
(PMID:30012868)		 UniProt
RGD		 PMID:30012868 GO_REF:0000024 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO
IEA		 (PMID:15917222)
GO_REF:0000107		 RGD
Ensembl		 PMID:15917222 GO_REF:0000107 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO
IEA		 (PMID:23398316)
GO_REF:0000107		 RGD
Ensembl		 PMID:23398316 GO_REF:0000107 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27238018)		 UniProt
Ensembl
RGD		 PMID:27238018 GO_REF:0000024 GO_REF:0000107 NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Clock clock circadian regulator involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:30012868)		 UniProt
Ensembl
RGD		 PMID:30012868 GO_REF:0000024 GO_REF:0000107 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q9R194 (PMID:10217146), (PMID:19833968), (PMID:21236481), (PMID:23575670), (PMID:23616524), (PMID:26431207)		 UniProt
RGD		 PMID:10217146 PMID:19833968 PMID:21236481 PMID:23575670 PMID:23616524 More... GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
UniProtKB:P97784 (PMID:10217146), (PMID:23575670), (PMID:23616524)		 UniProt
Ensembl
RGD		 PMID:10217146 PMID:23575670 PMID:23616524 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:19414593), (PMID:21930935)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:19414593 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614 		JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in ISO
IEA		 (PMID:21930935)
GO_REF:0000107		 RGD
Ensembl		 PMID:21930935 GO_REF:0000107 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26431207)		 UniProt
RGD		 PMID:26431207 GO_REF:0000024 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Drd4 dopamine receptor D4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24048828)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24048828 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:205,825,937...205,829,124
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G ENSRNOG00000069573 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:21,845,052...21,894,772 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO
IEA		 (PMID:16717091)
GO_REF:0000107		 RGD
Ensembl		 PMID:16717091 GO_REF:0000107 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (PMID:17463251)
(PMID:17462724), (PMID:17463252), (PMID:23616524)		 RGD PMID:17462724 PMID:17463251 PMID:17463252 PMID:23616524 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:27238018)		 UniProt
Ensembl
RGD		 PMID:27238018 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:172,447,738...172,609,591
Ensembl chr 2:170,149,694...170,309,941 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:28556462)		 UniProt
RGD		 PMID:28556462 GO_REF:0000024 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26776516)		 UniProt
Ensembl
RGD		 PMID:26776516 GO_REF:0000024 GO_REF:0000107 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:30530698)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:30530698 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24423872)		 UniProt
Ensembl
RGD		 PMID:24423872 GO_REF:0000024 GO_REF:0000107 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19217292)		 UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Kdm2a lysine demethylase 2A involved_in ISO
IEA		 (PMID:26037310)
GO_REF:0000107		 RGD
Ensembl		 PMID:26037310 GO_REF:0000107 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in IMP PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994 		JBrowse link
G Maged1 MAGE family member D1 involved_in ISO
IEA		 (PMID:20300063)
GO_REF:0000107		 RGD
Ensembl		 PMID:20300063 GO_REF:0000107 NCBI chr  X:59,422,715...59,429,381
Ensembl chr  X:59,422,717...59,429,364 		JBrowse link
G Magel2 MAGE family member L2 involved_in ISO
IEA		 (PMID:22208286)
GO_REF:0000107		 RGD
Ensembl		 PMID:22208286 GO_REF:0000107 NCBI chr 1:115,880,142...115,884,684
Ensembl chr 1:115,880,474...115,884,250 		JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22441692)		 UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22441692)		 UniProt
RGD		 PMID:22441692 GO_REF:0000024 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22441692)		 UniProt
Ensembl
RGD		 PMID:22441692 GO_REF:0000024 GO_REF:0000107 NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:29750810)		 UniProt
Ensembl
RGD		 PMID:29750810 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Noct nocturnin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22073225)		 UniProt
Ensembl
RGD		 PMID:22073225 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22966205)		 UniProt
Ensembl
RGD		 PMID:22966205 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:24048828) RGD PMID:24048828 NCBI chr 9:41,463,361...41,642,322
Ensembl chr 9:41,463,830...41,642,320 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IDA
IEA
ISO		 PMID:22425774
GO_REF:0000107
(PMID:19721697), (PMID:20159955), (PMID:29533925)		 Ensembl
RGD		 PMID:19721697 PMID:20159955 PMID:29533925 PMID:22425774 GO_REF:0000107, RGD:8553819 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23221024), (PMID:29533925)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23221024 PMID:29533925 GO_REF:0000024 GO_REF:0000107 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553 		JBrowse link
G Opn4 opsin 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12808468)		 UniProt
RGD		 PMID:12808468 GO_REF:0000024 NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11395012)		 UniProt
RGD		 PMID:11395012 GO_REF:0000024 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11395012), (PMID:19917250)		 UniProt
RGD		 PMID:11395012 PMID:19917250 GO_REF:0000024 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA		 (PMID:22274616)
GO_REF:0000107		 RGD
Ensembl		 PMID:22274616 GO_REF:0000107 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20159955)		 UniProt
Ensembl
RGD		 PMID:20159955 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISS
ISO		 GO_REF:0000024
(PMID:19041764)		 UniProt
RGD		 PMID:19041764 GO_REF:0000024 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISS
ISO		 GO_REF:0000024
(PMID:17476214)		 UniProt
RGD		 PMID:17476214 GO_REF:0000024 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21712997), (PMID:21930935)		 UniProt
Ensembl
RGD		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:21712997), (PMID:21930935)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000033 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21712997), (PMID:21930935)		 UniProt
Ensembl
RGD		 PMID:21712997 PMID:21930935 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19833968)		 UniProt
Ensembl
RGD		 PMID:19833968 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:19833968)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19833968 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543 		JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23185022)		 UniProt
Ensembl
RGD		 PMID:23185022 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:74,748,272...74,777,611
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO
IEA		 (PMID:24158435)
GO_REF:0000107		 RGD
Ensembl		 PMID:24158435 GO_REF:0000107 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:23723244)
GO_REF:0000107		 RGD
Ensembl		 PMID:23723244 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22966205)		 UniProt
Ensembl
RGD		 PMID:22966205 GO_REF:0000024 GO_REF:0000107 NCBI chr15:30,828,617...30,911,315
Ensembl chr15:30,828,626...30,911,202 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23172836)		 UniProt
RGD		 PMID:23172836 GO_REF:0000024 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO
IEA		 (PMID:23172836)
GO_REF:0000107		 RGD
Ensembl		 PMID:23172836 GO_REF:0000107 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17303680)		 UniProt
Ensembl
RGD		 PMID:17303680 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO
IEA		 (PMID:22966205)
GO_REF:0000107		 RGD
Ensembl		 PMID:22966205 GO_REF:0000107 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26392558)		 UniProt
Ensembl
RGD		 PMID:26392558 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:142,913,924...142,931,752
Ensembl chr 2:142,914,003...142,931,950 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA		 (PMID:30782483)
GO_REF:0000107		 RGD
Ensembl		 PMID:30782483 GO_REF:0000107 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in ISO (PMID:26392558) RGD PMID:26392558 NCBI chr 8:97,536,519...97,609,757
Ensembl chr 8:97,536,520...97,609,787 		JBrowse link
G Srrd SRR1 domain containing involved_in ISO (PMID:28802827) RGD PMID:28802827 NCBI chr12:44,294,675...44,300,287
Ensembl chr12:44,294,271...44,300,287 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO
IEA		 (PMID:27123980)
GO_REF:0000107		 RGD
Ensembl		 PMID:27123980 GO_REF:0000107 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Timeless timeless circadian regulator involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23418588)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23418588 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
G Top2a DNA topoisomerase II alpha involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24321095)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24321095 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO (PMID:24728990) RGD PMID:24728990 NCBI chr 1:119,204,244...119,297,097
Ensembl chr 1:110,070,480...110,157,250 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:27123980)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:27123980 GO_REF:0000024 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO
IEA		 (PMID:29626158)
GO_REF:0000107		 RGD
Ensembl		 PMID:29626158 GO_REF:0000107 NCBI chr  X:12,261,633...12,399,780
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 acts_upstream_of_or_within ISO
IEA		 MGI:2159013 (PMID:12451142)
GO_REF:0000107		 RGD
Ensembl		 PMID:12451142 GO_REF:0000107 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 involved_in ISO (PMID:12196552) RGD PMID:12196552 NCBI chr 1:214,996,180...215,012,136
Ensembl chr 1:205,567,220...205,582,356 		JBrowse link
G Clock clock circadian regulator IEP RGD PMID:10095082 RGD:632379 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3838359 (PMID:19217292) RGD PMID:19217292 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 acts_upstream_of_or_within ISO
IEA		 MGI:4421807 (PMID:20080691)
GO_REF:0000107		 RGD
Ensembl		 PMID:20080691 GO_REF:0000107 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977 		JBrowse link
G Sox14 SRY-box transcription factor 14 acts_upstream_of_or_within ISO
IEA		 (PMID:22920256)
GO_REF:0000107		 RGD
Ensembl		 PMID:22920256 GO_REF:0000107 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918 		JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase TAS RGD PMID:8770929 RGD:1298540 NCBI chr10:101,827,072...101,831,805
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO
IEA		 (PMID:26392540)
GO_REF:0000107		 RGD
Ensembl		 PMID:26392540 GO_REF:0000107 NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in ISO (PMID:18411297) RGD PMID:18411297 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23993098)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr16:19,022,171...19,080,880
Ensembl chr16:18,988,250...19,043,381 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:23616524)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
(PMID:23616524)
GO_REF:0000033		 UniProt
Ensembl
RGD
GO_Central		 PMID:23616524 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Fbxl21 F-box and leucine-rich repeat protein 21 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:23452855), (PMID:23452856)		 GO_Central
Ensembl
RGD		 PMID:23452855 PMID:23452856 GO_REF:0000033 GO_REF:0000107 NCBI chr17:8,060,412...8,077,415
Ensembl chr17:8,060,414...8,073,359 		JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in IBA
ISO		 GO_REF:0000033
(PMID:23452855), (PMID:23452856), (PMID:23616524)		 GO_Central
RGD		 PMID:23452855 PMID:23452856 PMID:23616524 GO_REF:0000033 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867 		JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19217292)		 UniProt
RGD		 PMID:19217292 GO_REF:0000024 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24089055)		 UniProt
RGD		 PMID:24089055 GO_REF:0000024 NCBI chr 6:137,999,845...138,038,696
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 acts_upstream_of_or_within ISO
IEA		 MGI:3574037 (PMID:15741322)
GO_REF:0000107		 RGD
Ensembl		 PMID:15741322 GO_REF:0000107 NCBI chr16:18,046,012...18,053,914
Ensembl chr16:18,046,013...18,053,459 		JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:26392540), (PMID:30240620), (PMID:31607531) RGD PMID:26392540 PMID:30240620 PMID:31607531 NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476 		JBrowse link
G Pde6b phosphodiesterase 6B involved_in ISO
IEA		 (PMID:30240620)
GO_REF:0000107		 RGD
Ensembl		 PMID:30240620 GO_REF:0000107 NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450 		JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:15888647)		 UniProt
GO_Central
RGD		 PMID:15888647 GO_REF:0000024 GO_REF:0000033 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431 		JBrowse link
G Per2 period circadian regulator 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Per3 period circadian regulator 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA		 (PMID:22274616)
GO_REF:0000107		 RGD
Ensembl		 PMID:22274616 GO_REF:0000107 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21712997)		 UniProt
Ensembl
RGD		 PMID:21712997 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:21712997)		 UniProt
RGD		 PMID:21712997 GO_REF:0000024 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21712997)		 UniProt
Ensembl
RGD		 PMID:21712997 GO_REF:0000024 GO_REF:0000107 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:17264215) RGD PMID:17264215 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in ISS
ISO		 GO_REF:0000024
(PMID:17264215)		 UniProt
RGD		 PMID:17264215 GO_REF:0000024 NCBI chr 1:202,047,934...202,058,025
Ensembl chr 1:202,047,927...202,058,020 		JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:23993098)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23993098 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991 		JBrowse link
G Tp53 tumor protein p53 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24051492)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24051492 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23213472)		 UniProt
Ensembl
RGD		 PMID:23213472 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331 		JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK-interacting pacemaker involved_in ISO
IEA		 (PMID:17310242)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:17310242 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:106,595,011...106,613,732
Ensembl chr 6:106,595,105...106,613,723 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17310242), (PMID:19605937)		 UniProt
RGD		 PMID:17310242 PMID:19605937 GO_REF:0000024 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19605937)		 UniProt
Ensembl
RGD		 PMID:19605937 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Pasd1 PAS domain containing repressor 1 involved_in ISO
IBA		 (PMID:25936801)
GO_REF:0000033		 RGD
GO_Central		 PMID:25936801 GO_REF:0000033 NCBI chr  X:149,617,933...149,639,214
Ensembl chr  X:149,620,972...149,638,675 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19605937)		 UniProt
RGD		 PMID:19605937 GO_REF:0000024 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:28903391) RGD PMID:28903391 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO
IEA		 (PMID:21680841)
GO_REF:0000107		 RGD
Ensembl		 PMID:21680841 GO_REF:0000107 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO
IEA		 (PMID:21680841)
GO_REF:0000107		 RGD
Ensembl		 PMID:21680841 GO_REF:0000107 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IMP RGD PMID:19066225 RGD:5128864 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adora1 adenosine A1 receptor IMP RGD PMID:19491711 RGD:2317916 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO
IEA		 (PMID:18329818)
GO_REF:0000107		 RGD
Ensembl		 PMID:18329818 GO_REF:0000107 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr13:48,210,922...48,247,826
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Drd1 dopamine receptor D1 IDA RGD PMID:12944496 RGD:1581422 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 IDA RGD PMID:12944496 RGD:1581422 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor IMP RGD PMID:16982424 RGD:10412019 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19605937), (PMID:22653727)
GO_REF:0000107
(PMID:23229515)		 UniProt
RGD
Ensembl		 PMID:19605937 PMID:22653727 PMID:23229515 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 involved_in ISO
IEA		 (PMID:12738229)
GO_REF:0000107
(PMID:19605937)		 RGD
Ensembl		 PMID:12738229 PMID:19605937 GO_REF:0000107 NCBI chr 4:179,699,432...179,747,710
Ensembl chr 4:179,699,502...179,746,949 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO
IEA		 (PMID:18782782)
GO_REF:0000107		 RGD
Ensembl		 PMID:18782782 GO_REF:0000107 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721 		JBrowse link
G Clock clock circadian regulator involved_in ISO
IEA		 (PMID:12738229), (PMID:23229515)
(PMID:22653727)
GO_REF:0000107		 RGD
Ensembl		 PMID:12738229 PMID:22653727 PMID:23229515 GO_REF:0000107 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO
IEA		 (PMID:18782782)
GO_REF:0000107		 RGD
Ensembl		 PMID:18782782 GO_REF:0000107 NCBI chr10:17,232,735...17,330,574
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:31294688)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:31294688 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Mtnr1b melatonin receptor 1B IDA RGD PMID:12643943 RGD:9588678 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:22356123)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22356123 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IDA RGD PMID:18946026 RGD:10448985 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:12930792 RGD:7777105 NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO
IEA		 (PMID:22753030)
GO_REF:0000107		 RGD
Ensembl		 PMID:22753030 GO_REF:0000107 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Rorc RAR-related orphan receptor C involved_in ISO (PMID:22753030) RGD PMID:22753030 NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24043798)		 UniProt
Ensembl
RGD		 PMID:24043798 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:14564007 RGD:734503 NCBI chr 7:654,804...678,769
Ensembl chr 7:654,822...678,738 		JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin IDA RGD PMID:9748091 RGD:1625449 NCBI chr14:17,891,564...17,907,043
Ensembl chr14:17,607,381...17,622,836 		JBrowse link
G Casp1 caspase 1 IMP RGD PMID:16455762 RGD:2315921 NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:2,587,831...2,597,383 		JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:19889861 PMID:20237285 RGD:2325188, RGD:10401262 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor IMP RGD PMID:20237285 RGD:10401262 NCBI chr 4:85,830,345...85,863,127
Ensembl chr 4:84,500,212...84,532,776 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide involved_in ISO
IEA		 (PMID:18329818)
GO_REF:0000107		 RGD
Ensembl		 PMID:18329818 GO_REF:0000107 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:146,865,712...146,869,621 		JBrowse link
G Mtnr1b melatonin receptor 1B IDA
IMP		 RGD PMID:19429170 PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737 		JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:16378653 RGD:1642507 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT|involved_in ISO (PMID:15538933) RGD PMID:15538933 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889 		JBrowse link
G Pmch pro-melanin-concentrating hormone IDA RGD PMID:12964948 RGD:1642489 NCBI chr 7:24,399,404...24,400,720
Ensembl chr 7:22,511,934...22,513,250 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252 		JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386 		JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23716671)		 UniProt
RGD		 PMID:23716671 GO_REF:0000024 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nps neuropeptide S IDA RGD PMID:22300983 RGD:9831203 NCBI chr 1:199,505,772...199,510,915
Ensembl chr 1:190,077,040...190,080,821 		JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:15944374 RGD:2306844 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237 		JBrowse link
G Uts2r urotensin 2 receptor IMP RGD PMID:15944374 RGD:2306844 NCBI chr10:106,438,092...106,439,252
Ensembl chr10:106,438,092...106,439,252 		JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:30792350)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:30792350 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:32,989,215...32,991,794
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:15215293) RGD PMID:15215293 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
G Il18 interleukin 18 involved_in TAS PMID:11506998 UniProt PMID:11506998 RGD:8554500 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Il6 interleukin 6 IMP RGD PMID:12667648 RGD:1358315 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 involved_in ISO
IEA		 (PMID:17925011)
GO_REF:0000107		 RGD
Ensembl		 PMID:17925011 GO_REF:0000107 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:34798058)		 UniProt
RGD		 PMID:34798058 GO_REF:0000024 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:32,989,215...32,991,794
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (PMID:15215293) RGD PMID:15215293 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEP RGD PMID:11038259 RGD:631747 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adrb1 adrenoceptor beta 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25083013)		 UniProt
RGD		 PMID:25083013 GO_REF:0000024 NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:255,771,597...255,807,259 		JBrowse link
G Cort cortistatin IDA RGD PMID:8622767 RGD:727760 NCBI chr 5:159,560,591...159,562,032 JBrowse link
G Csf2 colony stimulating factor 2 IMP RGD PMID:12047622 RGD:10449529 NCBI chr10:38,887,692...38,889,673
Ensembl chr10:38,386,945...38,389,199 		JBrowse link
G Drd3 dopamine receptor D3 IMP RGD PMID:15913875 RGD:1625069 NCBI chr11:70,385,586...70,437,793
Ensembl chr11:56,879,689...56,940,596 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:32893934)		 UniProt
RGD		 PMID:32893934 GO_REF:0000024 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Nmu neuromedin U involved_in IDA PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192 		JBrowse link
G Per3 period circadian regulator 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)		 UniProt
RGD		 PMID:17346965 PMID:19716732 PMID:21957163 PMID:24439663 PMID:24577121 More... GO_REF:0000024 NCBI chr 5:161,460,228...161,495,404
Ensembl chr 5:161,459,533...161,495,607 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 IEP RGD PMID:11145837 RGD:724610 NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001 		JBrowse link
G Ptgds prostaglandin D2 synthase involved_in ISS
IEA
ISO		 PMID:10781097
GO_REF:0000107
(PMID:10781097)		 Ensembl
RGD		 PMID:10781097 PMID:10781097 GO_REF:0000107, RGD:8553735 NCBI chr 3:8,281,899...8,284,833
Ensembl chr 3:8,281,899...8,284,833 		JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cartpt CART prepropeptide IDA RGD PMID:20116848 RGD:597811019 NCBI chr 2:32,989,215...32,991,794
Ensembl chr 2:31,255,098...31,290,713 		JBrowse link
G Hcrtr2 hypocretin receptor 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11282968)		 UniProt
RGD		 PMID:11282968 GO_REF:0000024 NCBI chr 8:76,989,834...77,105,953
Ensembl chr 8:76,989,834...77,105,893 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:10923657 RGD:10043386 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:29750810)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:29750810 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Oprl1 opioid related nociceptin receptor 1 IMP RGD PMID:16310969 RGD:9835023 NCBI chr 3:189,209,495...189,225,406
Ensembl chr 3:168,834,003...168,839,920 		JBrowse link
G Zfhx3 zinc finger homeobox 3 involved_in ISO (PMID:26232227) RGD PMID:26232227 NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    regulation of biological process 13394
      regulation of circadian rhythm 132
        entrainment of circadian clock + 30
        negative regulation of circadian rhythm + 15
        positive regulation of circadian rhythm + 28
        regulation of circadian sleep/wake cycle + 36
        regulation of locomotor rhythm + 4
        temperature compensation of the circadian clock 0
Path 2
Term Annotations click to browse term
  biological_process 20558
    rhythmic process 422
      circadian rhythm 280
        regulation of circadian rhythm 132
          entrainment of circadian clock + 30
          negative regulation of circadian rhythm + 15
          positive regulation of circadian rhythm + 28
          regulation of circadian sleep/wake cycle + 36
          regulation of locomotor rhythm + 4
          temperature compensation of the circadian clock 0
paths to the root