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ONTOLOGY REPORT - ANNOTATIONS

Term:thiamine-containing compound biosynthetic process
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Accession:GO:0042724 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), and related compounds.
Synonyms:exact_synonym: thiamin and derivative biosynthesis;   thiamin and derivative biosynthetic process;   thiamin-containing compound biosynthetic process;   thiamine and derivative biosynthesis;   thiamine and derivative biosynthetic process;   thiamine-containing compound anabolism;   thiamine-containing compound biosynthesis;   thiamine-containing compound formation;   thiamine-containing compound synthesis;   vitamin B1 and derivative biosynthesis;   vitamin B1 and derivative biosynthetic process


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thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc19a2 solute carrier family 19 member 2 involved_in ISO (PMID:8186267) RGD PMID:8186267 NCBI chr13:79,135,118...79,149,316
Ensembl chr13:76,601,900...76,616,172 		JBrowse link
G Slc19a3 solute carrier family 19 member 3 involved_in ISO MGI:4948864 (PMID:28665968), (PMID:8186267) RGD PMID:8186267 PMID:28665968 NCBI chr 9:84,275,722...84,299,368
Ensembl chr 9:84,277,024...84,299,337 		JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in ISO MGI:3691853 (PMID:17035501), (PMID:8186267) RGD PMID:8186267 PMID:17035501 NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447 		JBrowse link
G Thtpa thiamine triphosphatase involved_in IEA
ISO		 GO_REF:0000107
(PMID:18276586)		 Ensembl
RGD		 PMID:18276586 GO_REF:0000107 NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580 		JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in IEA
IBA
ISO		 GO_REF:0000041
GO_REF:0000033
(PMID:11342111), (PMID:38547260)
(PMID:10567383), (PMID:38547260)		 UniProt
GO_Central
RGD		 PMID:10567383 PMID:11342111 PMID:38547260 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        sulfur compound metabolic process 334
          thiamine-containing compound metabolic process 6
            thiamine-containing compound biosynthetic process 5
              thiamine biosynthetic process + 0
              thiamine diphosphate biosynthetic process + 5
Path 2
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      metabolic process 12171
        small molecule metabolic process 1918
          vitamin metabolic process 107
            water-soluble vitamin metabolic process 54
              thiamine-containing compound metabolic process 6
                thiamine-containing compound biosynthetic process 5
                  thiamine biosynthetic process + 0
                  thiamine diphosphate biosynthetic process + 5
paths to the root