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ONTOLOGY REPORT - ANNOTATIONS


Term:pteridine-containing compound biosynthetic process
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Accession:GO:0042559 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.
Synonyms:exact_synonym: pteridine and derivative biosynthesis;   pteridine and derivative biosynthetic process;   pteridine-containing compound anabolism;   pteridine-containing compound biosynthesis;   pteridine-containing compound formation;   pteridine-containing compound synthesis
 narrow_synonym: pterin biosynthesis;   pterin biosynthetic process



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pteridine-containing compound biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:15721862), (PMID:2463916), (PMID:3753653) RGD PMID:2463916 PMID:3753653 PMID:15721862 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA
(PMID:1881876)
(PMID:23704330)
GO_REF:0000107
RGD
Ensembl
PMID:1881876 PMID:23704330 GO_REF:0000107 NCBI chr 6:100,713,510...100,781,013
Ensembl chr 6:94,977,862...95,045,372
JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like involved_in ISO
IBA
(PMID:12937168)
GO_REF:0000033
RGD
GO_Central
PMID:12937168 GO_REF:0000033 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905
JBrowse link
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07068905.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:817,915...819,124 JBrowse link
G Dhfr dihydrofolate reductase involved_in ISO (PMID:23707606)
(PMID:19666465)
RGD PMID:19666465 PMID:23707606 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO
IBA
IEA
(PMID:17101830), (PMID:19666465), (PMID:7678411), (PMID:9445252)
GO_REF:0000033
GO_REF:0000043
RGD
GO_Central
UniProt
PMID:7678411 PMID:9445252 PMID:17101830 PMID:19666465 GO_REF:0000033 GO_REF:0000043 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698
JBrowse link
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:29,037,545...29,044,322
Ensembl chr20:28,953,864...29,044,292
Ensembl chr20:28,953,864...29,044,292
JBrowse link
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:8,845,161...8,896,343
Ensembl chr17:8,845,084...8,910,539
JBrowse link
G Pts 6-pyruvoyl-tetrahydropterin synthase acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
(PMID:9894812)
GO_REF:0000041
RGD
UniProt
PMID:9894812 PMID:1939130 GO_REF:0000041, RGD:68294 NCBI chr 8:50,870,838...50,877,869
Ensembl chr 8:50,870,841...50,877,869
JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in TAS
IBA
IEA
IMP
IDA
GO_REF:0000033
GO_REF:0000043
PMID:1898002
GO_Central
UniProt
RGD
PMID:3680258 PMID:1898002 PMID:9235988 PMID:660556 GO_REF:0000033 GO_REF:0000043, RGD:729701, RGD:8553309, RGD:5128582, RGD:4139903 NCBI chr14:65,670,251...65,683,853
Ensembl chr14:65,670,131...65,683,854
JBrowse link
G Spr sepiapterin reductase involved_in TAS
IBA
IMP
GO_REF:0000033 GO_Central
RGD
PMID:2201030 PMID:2179471 GO_REF:0000033, RGD:70022, RGD:1600056 NCBI chr 4:117,671,948...117,676,292
Ensembl chr 4:117,671,949...117,675,678
JBrowse link
G Spr-ps1 sepiapterin reductase, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:117,689,458...117,693,286
Ensembl chr 4:117,689,458...117,692,891
JBrowse link
G Txndc15 thioredoxin domain containing 15 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:8,898,074...8,910,538
Ensembl chr17:8,845,084...8,910,539
Ensembl chr 7:8,845,084...8,910,539
JBrowse link
tetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 TAS RGD PMID:14729668 RGD:1547843 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465
JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IDA RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
JBrowse link
G Dhfr dihydrofolate reductase involved_in IDA
ISO
IEA
IBA
(PMID:2303423)
GO_REF:0000041
GO_REF:0000033
RGD
UniProt
GO_Central
PMID:2303423 PMID:11502523 GO_REF:0000033 GO_REF:0000041, RGD:1298877 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698
JBrowse link
tetrahydrofolylpolyglutamate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fpgs folylpolyglutamate synthase involved_in IEA
ISO
IBA
GO_REF:0000041
(PMID:25164808)
(PMID:3619447), (PMID:8408020)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:3619447 PMID:8408020 PMID:25164808 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      metabolic process 12160
        pteridine-containing compound metabolic process 35
          pteridine-containing compound biosynthetic process 15
            folic acid-containing compound biosynthetic process + 7
            methanopterin-containing compound biosynthetic process + 0
            pteridine biosynthetic process 0
            tatiopterin biosynthetic process + 0
            tetrahydrobiopterin biosynthetic process 10
paths to the root