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ONTOLOGY REPORT - ANNOTATIONS


Term:melanosome
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Accession:GO:0042470 term browser browse the term
Definition:A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
Synonyms:xref: Wikipedia:Melanosome
 only_in_taxon: NCBITaxon:33208 ! Metazoa
 never_in_taxon: NCBITaxon:4895 ! Schizosaccharomyces;   NCBITaxon:6237 ! Caenorhabditis


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melanosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD27 ankyrin repeat domain 27 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,645,474...27,724,829
Ensembl chr 6:27,644,597...27,724,819
JBrowse link
G ANXA6 annexin A6 located_in IEA UniProt GO_REF:0000044 NCBI chr23:53,657,377...53,714,828
Ensembl chr23:53,657,718...53,714,850
JBrowse link
G APOE apolipoprotein E located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,377,154...38,381,219
Ensembl chr 6:38,376,887...38,381,438
JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 located_in IEA UniProt GO_REF:0000044 NCBI chr16:63,754,523...63,818,537
Ensembl chr16:63,753,521...63,816,551
JBrowse link
G ATP6V1B2 ATPase H+ transporting V1 subunit B2 located_in IEA UniProt GO_REF:0000044 NCBI chr 8:18,264,210...18,289,951
Ensembl chr 8:18,264,329...18,293,444
JBrowse link
G CALU calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr21:97,338,875...97,370,947
Ensembl chr21:97,338,913...97,373,156
JBrowse link
G CD63 CD63 molecule located_in IEA UniProt GO_REF:0000044 NCBI chr11:51,673,402...51,677,075
Ensembl chr11:51,672,740...51,676,301
JBrowse link
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr16:64,288,583...64,296,940
Ensembl chr16:64,289,828...64,296,922
JBrowse link
G DCT dopachrome tautomerase located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 3:73,246,161...73,315,574
Ensembl chr 3:73,274,621...73,313,905
JBrowse link
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 located_in IEA UniProt GO_REF:0000044 NCBI chr 2:303,195...310,618
Ensembl chr 2:307,988...310,475
JBrowse link
G ERP29 endoplasmic reticulum protein 29 located_in IEA UniProt GO_REF:0000044 NCBI chr11:107,244,359...107,255,293
Ensembl chr11:107,244,335...107,256,499
JBrowse link
G GCHFR GTP cyclohydrolase I feedback regulator located_in IEA Ensembl GO_REF:0000107 NCBI chr26:42,238,875...42,243,230
Ensembl chr26:42,239,390...42,243,117
JBrowse link
G GPR143 G protein-coupled receptor 143 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:8,178,818...8,223,291
Ensembl chr  X:8,179,154...8,222,603
JBrowse link
G HPS4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr19:9,356,868...9,387,847
Ensembl chr19:9,356,145...9,386,254
JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr17:27,914,261...27,921,666
Ensembl chr17:27,911,013...27,921,251
JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr11:99,119,268...99,139,988
Ensembl chr11:99,119,224...99,139,722
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 located_in IEA UniProt GO_REF:0000044 NCBI chr12:12,920,705...12,925,888
Ensembl chr12:12,920,710...12,927,431
JBrowse link
G ITGB1 integrin subunit beta 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 9:32,201,030...32,258,247
Ensembl chr 9:32,202,204...32,258,154
JBrowse link
G ITGB3 integrin subunit beta 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:59,372,171...59,431,434
Ensembl chr16:59,374,889...59,410,857
JBrowse link
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,295,758...91,319,881
Ensembl chr 3:91,295,681...91,321,333
JBrowse link
G LOC103242158 cystinosin located_in IEA Ensembl GO_REF:0000107 NCBI chr16:3,138,716...3,164,512
Ensembl chr16:3,138,734...3,164,625
JBrowse link
G MFSD12 major facilitator superfamily domain containing 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:3,307,855...3,322,966
Ensembl chr 6:3,304,960...3,322,896
JBrowse link
G MLANA melan-A located_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:73,595,693...73,613,403
Ensembl chr12:73,595,168...73,613,193
JBrowse link
G MLPH melanophilin located_in ISO (PMID:11887186), (PMID:14730011), (PMID:16137617), (PMID:16247022) MGI PMID:11887186 PMID:14730011 PMID:16137617 PMID:16247022 NCBI chr10:123,489,777...123,562,037
Ensembl chr10:123,491,702...123,562,906
JBrowse link
G MMP14 matrix metallopeptidase 14 located_in IEA UniProt GO_REF:0000044 NCBI chr29:23,201,425...23,212,408
Ensembl chr29:23,201,112...23,212,679
JBrowse link
G MREG melanoregulin located_in IEA Ensembl
InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:101,791,816...101,864,958
Ensembl chr10:101,789,059...101,864,172
JBrowse link
G MYO5A myosin VA located_in ISO (PMID:11980908)
(PMID:11886590), (PMID:11887186), (PMID:9133672)
UniProt
MGI
PMID:9133672 PMID:11886590 PMID:11887186 PMID:11980908 NCBI chr26:30,865,947...31,085,184 JBrowse link
G MYO5A myosin VA located_in IEA Ensembl GO_REF:0000107 Ensembl chr26:30,867,704...31,045,978 JBrowse link
G MYO7A myosin VIIA located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:68,334,781...68,423,215
Ensembl chr 1:68,350,598...68,425,625
JBrowse link
G MYRIP myosin VIIA and Rab interacting protein located_in ISO (PMID:11964381) UniProt PMID:11964381 NCBI chr22:1,369,820...1,765,121
Ensembl chr22:1,370,001...1,765,311
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta located_in IEA UniProt GO_REF:0000044 NCBI chr16:73,718,743...73,733,488
Ensembl chr16:73,718,656...73,733,892
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 located_in IEA UniProt GO_REF:0000044 NCBI chr26:39,273,982...39,300,170
Ensembl chr26:39,272,997...39,349,966
JBrowse link
G PDIA4 protein disulfide isomerase family A member 4 located_in IEA UniProt GO_REF:0000044 NCBI chr21:117,574,932...117,601,896
Ensembl chr21:117,574,427...117,601,960
JBrowse link
G PMEL premelanosome protein located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr11:51,892,131...51,905,073
Ensembl chr11:51,887,730...51,904,324
JBrowse link
G PPIB peptidylprolyl isomerase B located_in IEA UniProt GO_REF:0000044 NCBI chr26:19,380,496...19,399,596 JBrowse link
G RAB17 RAB17, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr10:123,579,771...123,603,355
Ensembl chr10:123,580,621...123,594,374
JBrowse link
G RAB1A RAB1A, member RAS oncogene family located_in ISO (PMID:22854043) UniProt PMID:22854043 NCBI chr14:41,890,055...41,932,180 JBrowse link
G RAB27A RAB27A, member RAS oncogene family located_in ISO
IEA
MMO:0000686 RGD
Ensembl
PMID:17043139 GO_REF:0000107 RGD:152025192 NCBI chr26:28,140,972...28,227,847
Ensembl chr26:28,197,464...28,227,963
JBrowse link
G RAB27B RAB27B, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr18:24,809,497...24,975,765
Ensembl chr18:24,814,626...24,875,818
JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr13:25,265,831...25,281,106 JBrowse link
G RAB38 RAB38, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:79,256,996...79,316,967
Ensembl chr 1:79,256,835...79,316,789
JBrowse link
G RAB9A RAB9A, member RAS oncogene family located_in ISO (PMID:26620560) UniProt PMID:26620560 NCBI chr  X:12,181,447...12,202,778
Ensembl chr  X:12,201,049...12,201,651
JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein located_in IEA UniProt GO_REF:0000044 NCBI chr20:13,602,852...13,624,483
Ensembl chr20:13,602,870...13,622,650
JBrowse link
G SGSM2 small G protein signaling modulator 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,970,412...2,012,417
Ensembl chr16:1,970,456...2,014,384
JBrowse link
G STX3 syntaxin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,866,853...13,916,803
Ensembl chr 1:13,874,526...13,916,997
JBrowse link
G SYTL1 synaptotagmin like 1 located_in ISO (PMID:11773082) UniProt PMID:11773082 NCBI chr20:105,434,824...105,446,639
Ensembl chr20:105,434,117...105,446,543
JBrowse link
G SYTL2 synaptotagmin like 2 located_in ISO (PMID:11773082) UniProt PMID:11773082 NCBI chr 1:76,937,076...77,061,895 JBrowse link
G TFRC transferrin receptor located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr15:91,102,153...91,134,994
Ensembl chr15:91,102,817...91,135,584
JBrowse link
G TMEM33 transmembrane protein 33 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:8,402,481...8,423,306
Ensembl chr27:8,404,044...8,423,314
JBrowse link
G TYR tyrosinase located_in ISO (PMID:22275436), (PMID:26620560), (PMID:9918801) UniProt PMID:9918801 PMID:22275436 PMID:26620560 NCBI chr 1:80,330,051...80,444,646 JBrowse link
G TYR tyrosinase located_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:80,332,469...80,381,547 JBrowse link
G TYRP1 tyrosinase related protein 1 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr12:66,841,867...66,861,730
Ensembl chr12:66,842,926...66,859,842
JBrowse link
melanosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB6 ATP binding cassette subfamily B member 6 (LAN blood group) located_in IEA UniProt
Ensembl
GO_REF:0000044 GO_REF:0000107 NCBI chr10:105,113,729...105,122,948
Ensembl chr10:105,112,797...105,122,358
JBrowse link
G ATP7A ATPase copper transporting alpha located_in ISO (PMID:18650808) UniProt PMID:18650808 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709
JBrowse link
G BACE2 beta-secretase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:85,079,404...85,194,908
Ensembl chr 2:85,079,812...85,187,944
JBrowse link
G CANX calnexin located_in IEA UniProt GO_REF:0000044 NCBI chr23:81,422,701...81,454,683
Ensembl chr23:81,422,693...81,482,332
JBrowse link
G DCT dopachrome tautomerase located_in IEA UniProt GO_REF:0000044 NCBI chr 3:73,246,161...73,315,574
Ensembl chr 3:73,274,621...73,313,905
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 located_in IEA UniProt GO_REF:0000044 NCBI chr17:56,500,523...56,650,925
Ensembl chr17:56,500,574...56,651,491
JBrowse link
G GPR143 G protein-coupled receptor 143 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr  X:8,178,818...8,223,291
Ensembl chr  X:8,179,154...8,222,603
JBrowse link
G MREG melanoregulin located_in IEA Ensembl GO_REF:0000107 NCBI chr10:101,791,816...101,864,958
Ensembl chr10:101,789,059...101,864,172
JBrowse link
G OCA2 OCA2 melanosomal transmembrane protein located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr26:54,022,346...54,429,991
Ensembl chr26:54,039,197...54,352,774
JBrowse link
G PMEL premelanosome protein located_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,892,131...51,905,073
Ensembl chr11:51,887,730...51,904,324
JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in ISO (PMID:23084991) UniProt PMID:23084991 NCBI chr13:25,265,831...25,281,106 JBrowse link
G RAB38 RAB38, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:79,256,996...79,316,967
Ensembl chr 1:79,256,835...79,316,789
JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr22:52,231,481...52,309,276
Ensembl chr22:52,230,835...52,309,306
JBrowse link
G SLC45A2 solute carrier family 45 member 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:33,178,614...33,219,664
Ensembl chr 4:33,179,349...33,219,028
JBrowse link
G TH tyrosine hydroxylase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,969,194...1,977,263
Ensembl chr 1:1,966,460...1,977,218
JBrowse link
G TPCN2 two pore segment channel 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:5,491,476...5,529,015
Ensembl chr 1:5,490,910...5,528,718
JBrowse link
G TYR tyrosinase located_in IEA UniProt GO_REF:0000044 NCBI chr 1:80,330,051...80,444,646 JBrowse link
G TYR tyrosinase located_in IEA UniProt GO_REF:0000044 Ensembl chr 1:80,332,469...80,381,547 JBrowse link
G TYRP1 tyrosinase related protein 1 located_in IEA UniProt
Ensembl
GO_REF:0000044 GO_REF:0000107 NCBI chr12:66,841,867...66,861,730
Ensembl chr12:66,842,926...66,859,842
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20992
    cellular anatomical structure 20608
      cytoplasm 11691
        cytoplasmic vesicle 1871
          pigment granule 62
            melanosome 62
              melanosome lumen 0
              melanosome membrane 19
Path 2
Term Annotations click to browse term
  cellular_component 20992
    cellular anatomical structure 20608
      organelle 15460
        membrane-bounded organelle 13924
          vesicle 2064
            intracellular vesicle 1879
              cytoplasmic vesicle 1871
                pigment granule 62
                  melanosome 62
                    melanosome lumen 0
                    melanosome membrane 19
paths to the root