ONTOLOGY REPORT - ANNOTATIONS
Term: biogenic amine biosynthetic process
Accession: GO:0042401
browse the term
Definition: The chemical reactions and pathways occurring at the level of individual cells resulting in the formation of any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.
Synonyms: exact_synonym: biogenic amine anabolism; biogenic amine biosynthesis; biogenic amine formation; biogenic amine synthesis; cellular biogenic amine biosynthetic process
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Crhr2
corticotropin releasing hormone receptor 2
ISO
RGD
PMID:17194738
RGD:5131263
NCBI chrNW_004624739:114,383...161,010
Ensembl chrNW_004624739:114,342...161,044
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Dbh
dopamine beta-hydroxylase
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624760:2,016,066...2,030,240
Ensembl chrNW_004624760:2,015,474...2,029,939
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Ddc
dopa decarboxylase
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624740:3,674,727...3,732,058
Ensembl chrNW_004624740:3,674,609...3,732,676
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Hdc
histidine decarboxylase
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624731:9,835,585...9,856,743
Ensembl chrNW_004624731:9,835,596...9,856,743
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Pnmt
phenylethanolamine N-methyltransferase
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624795:3,408,559...3,410,669
Ensembl chrNW_004624795:3,408,627...3,410,304
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Th
tyrosine hydroxylase
involved_in
ISO IEA
RGD UniProt InterPro
PMID:20025246
GO_REF:0000002 GO_REF:0000043 RGD:4139888
NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
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Agtr1
angiotensin II receptor type 1
ISO
RGD
PMID:20097214
RGD:6903884
NCBI chrNW_004624730:25,964,848...26,006,468
Ensembl chrNW_004624730:25,964,811...26,006,463
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Agtr2
angiotensin II receptor type 2
ISO
RGD
PMID:20097214
RGD:6903884
NCBI chrNW_004624967:327,627...332,000
Ensembl chrNW_004624967:329,284...330,372
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Chrna7
cholinergic receptor nicotinic alpha 7 subunit
ISO
RGD
PMID:12438507
RGD:704388
NCBI chrNW_004624768:908,907...1,024,953
Ensembl chrNW_004624768:909,099...1,024,902
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Dao
D-amino acid oxidase
involved_in
ISO
(PMID:17303072) (PMID:17042912)
UniProt
PMID:17042912 PMID:17303072
NCBI chrNW_004624747:12,094,658...12,117,000
Ensembl chrNW_004624747:12,105,133...12,116,604
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Ddc
dopa decarboxylase
involved_in
ISO IEA
RGD Ensembl
PMID:12703659
GO_REF:0000107 RGD:4139893
NCBI chrNW_004624740:3,674,727...3,732,058
Ensembl chrNW_004624740:3,674,609...3,732,676
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Gch1
GTP cyclohydrolase 1
involved_in
ISO
(PMID:16338639)
UniProt
PMID:16338639
NCBI chrNW_004624731:14,459,164...14,502,485
Ensembl chrNW_004624731:14,459,303...14,500,429
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Gpr37
G protein-coupled receptor 37
acts_upstream_of_or_within
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624783:11,291,601...11,319,467
Ensembl chrNW_004624783:11,291,497...11,320,952
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Nr4a2
nuclear receptor subfamily 4 group A member 2
acts_upstream_of_or_within
ISO
(PMID:16782508), (PMID:9608532)
MGI
PMID:9608532 PMID:16782508
NCBI chrNW_004624732:9,572,160...9,589,624
Ensembl chrNW_004624732:9,581,779...9,589,942
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Slc6a3
solute carrier family 6 member 3
acts_upstream_of_or_within
ISO
(PMID:9520487)
MGI
PMID:9520487
NCBI chrNW_004624751:694,165...720,287
Ensembl chrNW_004624751:694,099...719,465
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Snca
synuclein alpha
acts_upstream_of_or_within
ISO
(PMID:10707987)
MGI
PMID:10707987
NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320
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Tgfb2
transforming growth factor beta 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624835:2,363,059...2,436,536
Ensembl chrNW_004624835:2,363,139...2,437,643
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Th
tyrosine hydroxylase
involved_in
IEA
UniProt
GO_REF:0000041
NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
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Th
tyrosine hydroxylase
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:7592982), (PMID:7715703) (PMID:9520487)
RGD TreeGrafter MGI
PMID:2427363 PMID:7592982 PMID:7715703 PMID:9520487 PMID:19584816
GO_REF:0000118 RGD:1580046 RGD:5130972
NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
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Pnmt
phenylethanolamine N-methyltransferase
ISO
RGD
PMID:7914070
RGD:4139902
NCBI chrNW_004624795:3,408,559...3,410,669
Ensembl chrNW_004624795:3,408,627...3,410,304
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Th
tyrosine hydroxylase
involved_in
ISO
(PMID:12457228)
BHF-UCL
PMID:12457228
NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
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Hdc
histidine decarboxylase
involved_in acts_upstream_of_or_within
IEA
TreeGrafter Ensembl
GO_REF:0000107 GO_REF:0000118
NCBI chrNW_004624731:9,835,585...9,856,743
Ensembl chrNW_004624731:9,835,596...9,856,743
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Prg3
proteoglycan 3, pro eosinophil major basic protein 2
involved_in
ISO
(PMID:10318872)
UniProt
PMID:10318872
NCBI chrNW_004624864:3,220,811...3,225,556
Ensembl chrNW_004624864:3,220,811...3,225,554
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Nt5dc2
5'-nucleotidase domain containing 2
involved_in
ISO
PMID:31279527
UniProt
PMID:31279527
RGD:408345212
NCBI chrNW_004624822:4,675,430...4,684,074
Ensembl chrNW_004624822:4,675,430...4,685,553
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Atp7a
ATPase copper transporting alpha
acts_upstream_of_or_within
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624836:2,804,349...3,058,125
Ensembl chrNW_004624836:2,808,681...2,993,452
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Dbh
dopamine beta-hydroxylase
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:10051631), (PMID:9603211)
RGD TreeGrafter MGI UniProt
PMID:9603211 PMID:10051631 PMID:10573542
GO_REF:0000041 GO_REF:0000118 RGD:1625403
NCBI chrNW_004624760:2,016,066...2,030,240
Ensembl chrNW_004624760:2,015,474...2,029,939
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Epas1
endothelial PAS domain protein 1
ISO
RGD
PMID:19457096
RGD:5128877
NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054
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Gata3
GATA binding protein 3
acts_upstream_of_or_within
IEA
Ensembl
GO_REF:0000107
NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392
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Hand2
heart and neural crest derivatives expressed 2
acts_upstream_of_positive_effect
ISO
(PMID:19008477)
BHF-UCL
PMID:19008477
NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343
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Insm1
INSM transcriptional repressor 1
involved_in
ISO
(PMID:18094025)
UniProt
PMID:18094025
NCBI chrNW_004624741:20,862,835...20,866,176
Ensembl chrNW_004624741:20,863,088...20,864,584
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Kl
klotho
ISO
RGD
PMID:20086041
RGD:10403068
NCBI chrNW_004624915:95,155...110,834
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LOC101701601
putative DBH-like monooxygenase protein 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624821:9,598,949...9,603,373
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LOC101711916
putative DBH-like monooxygenase protein 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624765:22,256,119...22,264,715
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Moxd1
monooxygenase DBH like 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624753:6,379,583...6,471,020
Ensembl chrNW_004624753:6,377,330...6,471,085
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Th
tyrosine hydroxylase
involved_in
ISO
(PMID:12457228)
BHF-UCL
PMID:12457228
NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154
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Dbh
dopamine beta-hydroxylase
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624760:2,016,066...2,030,240
Ensembl chrNW_004624760:2,015,474...2,029,939
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LOC101701601
putative DBH-like monooxygenase protein 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624821:9,598,949...9,603,373
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LOC101711916
putative DBH-like monooxygenase protein 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624765:22,256,119...22,264,715
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Moxd1
monooxygenase DBH like 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624753:6,379,583...6,471,020
Ensembl chrNW_004624753:6,377,330...6,471,085
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Amd1
adenosylmethionine decarboxylase 1
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624916:1,837,258...1,855,450
Ensembl chrNW_004624916:1,837,242...1,854,883
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Azin1
antizyme inhibitor 1
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624763:19,643,980...19,667,125
Ensembl chrNW_004624763:19,643,980...19,667,125
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Azin2
antizyme inhibitor 2
involved_in
IEA
InterPro UniProt
GO_REF:0000002 GO_REF:0000043
NCBI chrNW_004624764:16,145,696...16,177,588
Ensembl chrNW_004624764:16,145,308...16,175,000
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LOC101700675
S-adenosylmethionine decarboxylase proenzyme 1-like
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624905:46,356...53,446
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LOC101705036
antizyme inhibitor 2-like
involved_in
IEA
InterPro
GO_REF:0000002
NCBI chrNW_004624764:14,797,768...14,806,415
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LOC101707712
S-adenosylmethionine decarboxylase proenzyme 1
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624761:3,529,362...3,530,491
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LOC101711473
S-adenosylmethionine decarboxylase proenzyme 1
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624792:2,483,727...2,485,169
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LOC101713051
S-adenosylmethionine decarboxylase proenzyme-like
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624743:17,283,384...17,285,140
G
LOC101713365
S-adenosylmethionine decarboxylase proenzyme-like
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624913:1,986,750...1,987,931
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LOC101718865
spermine synthase
involved_in
IEA
UniProt
GO_REF:0000043 GO_REF:0000104
NCBI chrNW_004624805:6,647,484...6,648,581
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Oaz1
ornithine decarboxylase antizyme 1
involved_in
IEA
UniProt
GO_REF:0000043
NCBI chrNW_004624828:6,617,342...6,620,466
Ensembl chrNW_004624828:6,617,727...6,620,402
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Odc1
ornithine decarboxylase 1
involved_in
IEA
InterPro UniProt
GO_REF:0000002 GO_REF:0000043
NCBI chrNW_004624865:4,851,565...4,858,868
Ensembl chrNW_004624865:4,851,878...4,860,558
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Sat1
spermidine/spermine N1-acetyltransferase 1
involved_in
ISO
(PMID:15283699)
UniProt
PMID:15283699
NCBI chrNW_004624897:176,414...179,322
Ensembl chrNW_004624897:176,278...181,912
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Sat2
spermidine/spermine N1-acetyltransferase family member 2
NOT|involved_in
ISO
(PMID:15283699)
UniProt
PMID:15283699
NCBI chrNW_004624786:10,232,078...10,233,602
Ensembl chrNW_004624786:10,227,937...10,233,723
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Sms
spermine synthase
involved_in
IEA
UniProt
GO_REF:0000043 GO_REF:0000104
NCBI chrNW_004624829:6,883,018...6,931,646
Ensembl chrNW_004624829:6,883,027...6,931,389
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Srm
spermidine synthase
involved_in
IEA
UniProt
GO_REF:0000043 GO_REF:0000104
NCBI chrNW_004624818:1,725,614...1,729,374
Ensembl chrNW_004624818:1,725,480...1,732,186
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Epas1
endothelial PAS domain protein 1
ISO
RGD
PMID:19457096
RGD:5128877
NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054
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Park7
Parkinsonism associated deglycase
involved_in
ISO
(PMID:19703902)
ParkinsonsUK-UCL
PMID:19703902
NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042
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Vps35
VPS35 retromer complex component
involved_in
ISO
(PMID:26203154)
ParkinsonsUK-UCL
PMID:26203154
NCBI chrNW_004624914:160,483...188,534
Ensembl chrNW_004624914:160,483...188,490
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Paox
polyamine oxidase
involved_in
ISO
(PMID:16354669)
UniProt
PMID:16354669
NCBI chrNW_004624737:13,312,728...13,324,559
Ensembl chrNW_004624737:13,312,201...13,324,559
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Odc1
ornithine decarboxylase 1
ISO
RGD
PMID:1415709 PMID:10430362
RGD:1578320 RGD:7242912
NCBI chrNW_004624865:4,851,565...4,858,868
Ensembl chrNW_004624865:4,851,878...4,860,558
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Paox
polyamine oxidase
involved_in
ISO
(PMID:16354669)
UniProt
PMID:16354669
NCBI chrNW_004624737:13,312,728...13,324,559
Ensembl chrNW_004624737:13,312,201...13,324,559
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Agmat
agmatinase (putative)
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624764:1,839,667...1,853,344
Ensembl chrNW_004624764:1,843,227...1,853,350
G
Azin1
antizyme inhibitor 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624763:19,643,980...19,667,125
Ensembl chrNW_004624763:19,643,980...19,667,125
G
Azin2
antizyme inhibitor 2
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624764:16,145,696...16,177,588
Ensembl chrNW_004624764:16,145,308...16,175,000
G
LOC101705036
antizyme inhibitor 2-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624764:14,797,768...14,806,415
G
Odc1
ornithine decarboxylase 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624865:4,851,565...4,858,868
Ensembl chrNW_004624865:4,851,878...4,860,558
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Aldh2
aldehyde dehydrogenase 2 family member
involved_in
ISO
(PMID:26711020)
UniProt
PMID:26711020
NCBI chrNW_004624747:20,407,190...20,438,605
Ensembl chrNW_004624747:20,403,717...20,438,690
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Amd1
adenosylmethionine decarboxylase 1
involved_in
ISO IEA
RGD TreeGrafter UniProt InterPro
PMID:1415709 PMID:10430362 PMID:10712236
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 RGD:1578320 RGD:7242911 RGD:7242912
NCBI chrNW_004624916:1,837,258...1,855,450
Ensembl chrNW_004624916:1,837,242...1,854,883
G
LOC101700675
S-adenosylmethionine decarboxylase proenzyme 1-like
involved_in
IEA
InterPro UniProt TreeGrafter
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118
NCBI chrNW_004624905:46,356...53,446
G
LOC101707712
S-adenosylmethionine decarboxylase proenzyme 1
involved_in
IEA
InterPro UniProt TreeGrafter
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118
NCBI chrNW_004624761:3,529,362...3,530,491
G
LOC101711473
S-adenosylmethionine decarboxylase proenzyme 1
involved_in
IEA
TreeGrafter InterPro UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118
NCBI chrNW_004624792:2,483,727...2,485,169
G
LOC101713051
S-adenosylmethionine decarboxylase proenzyme-like
involved_in
IEA
TreeGrafter UniProt InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118
NCBI chrNW_004624743:17,283,384...17,285,140
G
LOC101713365
S-adenosylmethionine decarboxylase proenzyme-like
involved_in
IEA
UniProt InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000043 GO_REF:0000118
NCBI chrNW_004624913:1,986,750...1,987,931
G
Srm
spermidine synthase
involved_in
ISO IEA
RGD TreeGrafter Ensembl
PMID:8494549 PMID:12843627 PMID:16931179
GO_REF:0000107 GO_REF:0000118 RGD:1359042 RGD:7242920 RGD:7242928
NCBI chrNW_004624818:1,725,614...1,729,374
Ensembl chrNW_004624818:1,725,480...1,732,186
G
Amd1
adenosylmethionine decarboxylase 1
involved_in
ISO IEA
RGD TreeGrafter InterPro
PMID:1415709 PMID:10430362 PMID:10712236
GO_REF:0000002 GO_REF:0000118 RGD:1578320 RGD:7242911 RGD:7242912
NCBI chrNW_004624916:1,837,258...1,855,450
Ensembl chrNW_004624916:1,837,242...1,854,883
G
LOC101700675
S-adenosylmethionine decarboxylase proenzyme 1-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624905:46,356...53,446
G
LOC101707712
S-adenosylmethionine decarboxylase proenzyme 1
involved_in
IEA
TreeGrafter InterPro
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624761:3,529,362...3,530,491
G
LOC101711473
S-adenosylmethionine decarboxylase proenzyme 1
involved_in
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624792:2,483,727...2,485,169
G
LOC101713051
S-adenosylmethionine decarboxylase proenzyme-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624743:17,283,384...17,285,140
G
LOC101713365
S-adenosylmethionine decarboxylase proenzyme-like
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chrNW_004624913:1,986,750...1,987,931
G
LOC101718865
spermine synthase
involved_in
IEA
InterPro TreeGrafter
GO_REF:0000002 GO_REF:0000118
NCBI chrNW_004624805:6,647,484...6,648,581
G
Sms
spermine synthase
involved_in
ISO IEA
RGD TreeGrafter InterPro
PMID:8494549
GO_REF:0000002 GO_REF:0000118 RGD:7242928
NCBI chrNW_004624829:6,883,018...6,931,646
Ensembl chrNW_004624829:6,883,027...6,931,389
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all