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ONTOLOGY REPORT - ANNOTATIONS

Term:modified amino acid catabolic process
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Accession:GO:0042219 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of compounds derived from amino acids, organic acids containing one or more amino substituents.
Synonyms:exact_synonym: amino acid derivative catabolic process;   cellular amino acid derivative breakdown;   cellular amino acid derivative catabolic process;   cellular amino acid derivative catabolism;   cellular amino acid derivative degradation;   cellular modified amino acid breakdown;   cellular modified amino acid catabolic process;   cellular modified amino acid catabolism;   cellular modified amino acid degradation;   modified amino acid catabolism


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modified amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggact gamma-glutamylamine cyclotransferase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000104
(PMID:20110353)		 UniProt
Ensembl
RGD		 PMID:20110353 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr15:106,375,924...106,406,649
Ensembl chr15:99,968,282...99,993,455 		JBrowse link
G Ggact-ps3 gamma-glutamylamine cyclotransferase, pseudogene 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:47,343,248...47,355,132
Ensembl chr 5:47,354,774...47,355,154
Ensembl chr 5:47,354,774...47,355,154 		JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect ISO
IEA		 (PMID:19933275), (PMID:21238436)
GO_REF:0000107		 RGD
Ensembl		 PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chr 8:9,731,592...9,748,934
Ensembl chr 8:1,452,282...1,463,966 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in ISO
IEA
IMP
IDA		 (PMID:19933275)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000104
(PMID:31624291)
GO_REF:0000117
PMID:10585460
PMID:1848231		 RGD
Ensembl
InterPro
UniProt		 PMID:19933275 PMID:31624291 PMID:10585460 PMID:1848231 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117, RGD:150521656, RGD:632027 NCBI chr 4:124,617,182...124,663,674
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO
IEA		 (PMID:21238436)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000002
GO_REF:0000104
(PMID:33168096)		 RGD
Ensembl
UniProt
InterPro		 PMID:21238436 PMID:33168096 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:22,141,872...22,193,403
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO
IEA		 (PMID:21998747)
GO_REF:0000107		 RGD
Ensembl		 PMID:21998747 GO_REF:0000107 NCBI chr 1:250,806,430...250,833,544
Ensembl chr 1:240,857,126...240,884,568 		JBrowse link
amino-acid betaine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:26,594,852...26,614,429
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:26,647,540...26,722,496
Ensembl chr 2:24,912,578...24,987,528 		JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain involved_in ISO (PMID:9861014) RGD PMID:9861014 NCBI chr 9:75,783,689...75,822,077
Ensembl chr 9:68,333,980...68,372,220 		JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:98,609,410...98,681,901
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:52,362,384...52,382,647
Ensembl chr 5:47,566,072...47,586,212 		JBrowse link
glutathione catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chac1 ChaC glutathione-specific gamma-glutamylcyclotransferase 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:126,796,131...126,799,352
Ensembl chr 3:106,342,302...106,345,526 		JBrowse link
G Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr14:108,921,669...108,929,215
Ensembl chr14:104,720,758...104,728,301 		JBrowse link
G Dpep1 dipeptidase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:9560193)		 UniProt
Ensembl
RGD		 PMID:9560193 GO_REF:0000024 GO_REF:0000107 NCBI chr19:68,118,270...68,143,781
Ensembl chr19:51,219,660...51,235,257 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:17924658), (PMID:21447318)		 UniProt
GO_Central
InterPro
RGD		 PMID:17924658 PMID:21447318 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in ISO
IEA
IBA
ISS		 (PMID:1676842), (PMID:21447318)
GO_REF:0000002
GO_REF:0000033
GO_REF:0000024		 RGD
InterPro
GO_Central
UniProt		 PMID:1676842 PMID:21447318 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr20:13,042,694...13,070,960
Ensembl chr20:13,043,257...13,071,450 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:164,438,240...164,464,059
Ensembl chr 3:143,978,082...144,001,492 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in IDA PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:59,336,283...59,377,926 		JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within		 ISO
IBA
ISS		 (PMID:30643283)
MGI:5487621 (PMID:23297193)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23297193 PMID:30643283 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:160,119,724...160,179,959
Ensembl chr 3:139,659,317...139,719,564 		JBrowse link
G Abhd12b abhydrolase domain containing 12B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:94,404,594...94,432,395
Ensembl chr 6:88,668,642...88,696,458 		JBrowse link
G Abhd16a abhydrolase domain containing 16A, phospholipase involved_in IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:25580854)
GO_REF:0000033
GO_REF:0000024		 Ensembl
RGD
GO_Central
UniProt		 PMID:25580854 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:3,723,756...3,738,617
Ensembl chr20:3,719,091...3,733,927 		JBrowse link
G Abhd16b abhydrolase domain containing 16B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:168,594,677...168,596,574
Ensembl chr 3:168,594,609...168,619,762 		JBrowse link
prenylcysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11078725), (PMID:12186880)
GO_REF:0000107
GO_REF:0000002
MGI:2449567 (PMID:12151402)
GO_REF:0000104		 RGD
Ensembl
InterPro
UniProt		 PMID:11078725 PMID:12151402 PMID:12186880 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:120,389,545...120,400,382
Ensembl chr 4:118,830,638...118,842,951 		JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr18:57,420,971...57,431,632
Ensembl chr18:55,150,650...55,161,327 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within IDA
ISO		 (PMID:12023972) RGD PMID:12023972 PMID:11741948 RGD:730275 NCBI chr 3:164,029,338...164,044,562
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:30,908,621...30,973,409
Ensembl chr 3:10,510,553...10,573,874 		JBrowse link
thyroid hormone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dio1 iodothyronine deiodinase 1 involved_in IEA
IDA
ISO
ISS		 GO_REF:0000107
PMID:8187873
(PMID:15192045)
(PMID:12586771), (PMID:32718224)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12586771 PMID:15192045 PMID:32718224 PMID:8187873 GO_REF:0000024 GO_REF:0000107, RGD:598092474 NCBI chr 5:127,303,089...127,319,784
Ensembl chr 5:122,074,279...122,090,970 		JBrowse link
G Dio2 iodothyronine deiodinase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2182450 (PMID:11731615)
(PMID:15192045)
(PMID:10403186), (PMID:11108274), (PMID:12586771)
GO_REF:0000107		 RGD
Ensembl		 PMID:10403186 PMID:11108274 PMID:11731615 PMID:12586771 PMID:15192045 GO_REF:0000107 NCBI chr 6:115,396,308...115,410,594
Ensembl chr 6:109,665,523...109,679,809 		JBrowse link
G Dio3 iodothyronine deiodinase 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:20203194)
(PMID:15192045)
(PMID:12746313)
GO_REF:0000107
MGI:2664293 (PMID:16410833), (PMID:20203194), (PMID:25002520)		 RGD
Ensembl		 PMID:12746313 PMID:15192045 PMID:16410833 PMID:20203194 PMID:25002520 GO_REF:0000107 NCBI chr 6:135,107,072...135,108,933
Ensembl chr 6:129,285,749...129,286,660 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        catabolic process 2956
          modified amino acid catabolic process 29
            4-hydroxyproline catabolic process 1
            N(omega),N(omega)-dimethyl-L-arginine catabolic process 1
            N(omega)-methyl-L-arginine catabolic process 0
            S-adenosylhomocysteine catabolic process 1
            amino-acid betaine catabolic process + 3
            folic acid-containing compound catabolic process + 5
            glutathione catabolic process 6
            hydroxylysine catabolic process 0
            lincomycin catabolic process 0
            modified histidine catabolic process + 0
            ochratoxin A catabolic process 0
            pantothenate catabolic process 0
            phosphagen catabolic process + 0
            phosphatidylserine catabolic process 4
            prenylcysteine catabolic process 2
            sarcosine catabolic process 1
            thyroid hormone catabolic process 3
paths to the root