ONTOLOGY REPORT - ANNOTATIONS
Term: lipoprotein catabolic process
Accession: GO:0042159
browse the term
Definition: The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.
Synonyms: exact_synonym: lipoprotein breakdown; lipoprotein catabolism; lipoprotein degradation
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Apob
apolipoprotein B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:107202 (PMID:15863839)
Ensembl RGD
PMID:15863839
GO_REF:0000107
NCBI chr 6:36,563,704...36,603,300
Ensembl chr 6:30,844,368...30,892,497
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Apoc2
apolipoprotein C2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:88,457,397...88,462,365
Ensembl chr 1:79,329,428...79,334,476
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Apoe
apolipoprotein E
acts_upstream_of_or_within
ISO
MGI:1857303 (PMID:17720994)
RGD
PMID:17720994
NCBI chr 1:88,481,889...88,485,816
Ensembl chr 1:79,353,916...79,357,932
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Atm
ATM serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:88057 (PMID:15863839)
RGD
PMID:15863839
NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437
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Ctsd
cathepsin D
involved_in
ISO IEA
(PMID:16997486) GO_REF:0000107
RGD Ensembl
PMID:16997486
GO_REF:0000107
NCBI chr 1:206,956,945...206,968,821
Ensembl chr 1:197,527,467...197,539,488
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Ldlr
low density lipoprotein receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857212 (PMID:15741654), (PMID:15805190), (PMID:9788969)
Ensembl RGD
PMID:9788969 PMID:15741654 PMID:15805190
GO_REF:0000107
NCBI chr 8:28,546,191...28,569,075
Ensembl chr 8:20,270,041...20,294,580
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Lipa
lipase A, lysosomal acid type
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:6364606 (PMID:33357458)
Ensembl RGD
PMID:33357458
GO_REF:0000107
NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633
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Notum
NOTUM, palmitoleoyl-protein carboxylesterase
involved_in
ISO
(PMID:25731175)
RGD
PMID:25731175
NCBI chr10:105,933,245...105,940,327
Ensembl chr10:105,933,249...105,940,315
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Abhd10
abhydrolase domain containing 10, depalmitoylase
involved_in
ISS ISO
GO_REF:0000024 (PMID:31740833)
UniProt RGD
PMID:31740833
GO_REF:0000024
NCBI chr11:55,081,273...55,095,044
Ensembl chr11:55,081,049...55,107,866
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Abhd12
abhydrolase domain containing 12, lysophospholipase
involved_in
ISO
(PMID:27307232)
RGD
PMID:27307232
NCBI chr 3:160,119,724...160,179,959
Ensembl chr 3:139,659,317...139,719,564
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Abhd13
abhydrolase domain containing 13
involved_in
ISO
(PMID:27307232)
RGD
PMID:27307232
NCBI chr16:79,501,879...79,516,712
Ensembl chr16:79,501,727...79,516,748
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Abhd17a
abhydrolase domain containing 17A, depalmitoylase
involved_in
IDA ISO
PMID:27307232 UniProtKB:Q5VST6|UniProtKB:Q6PCB6 (PMID:26701913)
RGD
PMID:26701913 PMID:27307232
RGD:13441201
NCBI chr 7:9,775,016...9,781,447
Ensembl chr 7:9,124,332...9,130,762
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Abhd17b
abhydrolase domain containing 17B, depalmitoylase
involved_in
ISO
UniProtKB:Q6PCB6|UniProtKB:Q96GS6 (PMID:26701913) (PMID:27307232), (PMID:28521134)
RGD
PMID:26701913 PMID:27307232 PMID:28521134
NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
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Abhd17c
abhydrolase domain containing 17C, depalmitoylase
involved_in
ISO
UniProtKB:Q5VST6|UniProtKB:Q96GS6 (PMID:26701913) (PMID:27307232)
RGD
PMID:26701913 PMID:27307232
NCBI chr 1:138,084,632...138,125,595
Ensembl chr 1:138,084,634...138,125,595
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Lypla1
lysophospholipase 1
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:27307232) (PMID:19439193), (PMID:27481942) (PMID:22399288) GO_REF:0000024
RGD UniProt
PMID:19439193 PMID:22399288 PMID:27307232 PMID:27481942
GO_REF:0000024
NCBI chr 5:19,477,408...19,506,568
Ensembl chr 5:14,679,606...14,708,746
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Lypla2
lysophospholipase 2
involved_in
ISO ISS
(PMID:27307232) (PMID:28826475) GO_REF:0000024
RGD UniProt
PMID:27307232 PMID:28826475
GO_REF:0000024
NCBI chr 5:153,481,973...153,486,692
Ensembl chr 5:148,198,439...148,203,092
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Lyplal1
lysophospholipase-like 1
acts_upstream_of_or_within
ISO
(PMID:22399288)
RGD
PMID:22399288
NCBI chr13:100,158,060...100,189,339
Ensembl chr13:97,626,451...97,657,867
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Ppt1
palmitoyl-protein thioesterase 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2176390 (PMID:11717424), (PMID:16242638) (PMID:10658183), (PMID:10737604) PMID:8895569
UniProt RGD
PMID:10658183 PMID:10737604 PMID:11717424 PMID:16242638 PMID:8895569
GO_REF:0000024, RGD:8553248
NCBI chr 5:140,406,318...140,427,201
Ensembl chr 5:135,121,163...135,142,048
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