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ONTOLOGY REPORT - ANNOTATIONS

Term:bile acid signaling pathway
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Accession:GO:0038183 term browser browse the term
Definition:The series of molecular signals initiated by bile acid binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.
Comment:This term is not for direct annotation. Please use a more specific child: 'cell surface bile acid receptor signaling pathway' for GPCRs and 'intracellular bile acid receptor signaling pathway' for nuclear receptors.


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adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO
IEA		 (PMID:12419312), (PMID:12524422)
GO_REF:0000107		 RGD
Ensembl		 PMID:12419312 PMID:12524422 GO_REF:0000107 NCBI chr 9:83,309,895...83,312,397
Ensembl chr 9:75,860,677...75,863,168 		JBrowse link
nuclear receptor-mediated bile acid signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IDA
IEA
ISO		 PMID:10334992
GO_REF:0000107
(PMID:10334992), (PMID:21757002)
(PMID:21757002)		 Ensembl
RGD		 PMID:10334992 PMID:21757002 PMID:10334992 GO_REF:0000107, RGD:15090836 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
G Vdr vitamin D receptor involved_in ISO (PMID:12016314) RGD PMID:12016314 NCBI chr 7:130,864,764...130,916,757
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      signal transduction 7301
        bile acid signaling pathway 3
          adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway 1
          nuclear receptor-mediated bile acid signaling pathway 2
Path 2
Term Annotations click to browse term
  biological_process 20558
    biological regulation 13833
      regulation of biological process 13394
        signaling 7862
          signal transduction 7301
            bile acid signaling pathway 3
              adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway 1
              nuclear receptor-mediated bile acid signaling pathway 2
paths to the root