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ONTOLOGY REPORT - ANNOTATIONS


Term:selenocysteine insertion sequence binding
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Accession:GO:0035368 term browser browse the term
Definition:Binding to a selenocysteine insertion sequence (SECIS), a regulatory sequence within mRNA which directs incorporation of a selenocysteine at a stop codon (UGA) during translation.
Synonyms:exact_synonym: SECIS binding



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selenocysteine insertion sequence binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific enables ISO (PMID:22992746) RGD PMID:22992746 NCBI chr 4:120,719,616...120,915,779
Ensembl chr 4:120,707,133...120,915,779
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IDA RGD PMID:21685449 RGD:10044260 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Ncl nucleolin IDA RGD PMID:20385601 RGD:5133727 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Rpl30 ribosomal protein L30 IDA RGD PMID:15821744 RGD:11038818 NCBI chr 7:65,648,266...65,651,401
Ensembl chr 7:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
JBrowse link
G Secisbp2 SECIS binding protein 2 enables IDA
IEA
ISO
IBA
GO_REF:0000107
PMID:10464275
(PMID:35709277)
(PMID:22992746)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:22992746 PMID:35709277 PMID:15821744 PMID:10464275 GO_REF:0000033 GO_REF:0000107, RGD:11038818, RGD:401966875 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523
JBrowse link
G Secisbp2l SECIS binding protein 2-like enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:112,989,613...113,036,060
Ensembl chr 3:112,991,908...113,035,884
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  molecular_function 20623
    binding 17712
      organic cyclic compound binding 6133
        nucleic acid binding 3842
          RNA binding 1569
            mRNA binding 587
              selenocysteine insertion sequence binding 6
paths to the root