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ONTOLOGY REPORT - ANNOTATIONS

Term:cardiocyte differentiation
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Accession:GO:0035051 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual.
Synonyms:exact_synonym: cardiac cell differentiation
 related_synonym: heart cell differentiation


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cardiocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19736317)
GO_REF:0000107
(PMID:15110716)		 RGD
Ensembl		 PMID:15110716 PMID:19736317 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
atrial cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fhl2 four and a half LIM domains 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15509787)		 Ensembl
RGD		 PMID:15509787 GO_REF:0000107 NCBI chr 9:52,881,091...52,954,540
Ensembl chr 9:45,388,981...45,431,192 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:50,852,965...50,857,060
Ensembl chr15:44,443,101...44,447,247 		JBrowse link
atrioventricular bundle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx3 iroquois homeobox 3 involved_in ISO
IEA		 (PMID:26786475)
GO_REF:0000107		 RGD
Ensembl		 PMID:26786475 GO_REF:0000107 NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:3710254 (PMID:18467625)
GO_REF:0000107		 RGD
Ensembl		 PMID:18467625 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15289437)		 Ensembl
RGD		 PMID:15289437 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
atrioventricular node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO
IEA		 (PMID:17998461)
GO_REF:0000107		 RGD
Ensembl		 PMID:17998461 GO_REF:0000107 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Maml1 mastermind-like transcriptional coactivator 1 involved_in ISO
IEA		 (PMID:21266778)
GO_REF:0000107		 RGD
Ensembl		 PMID:21266778 GO_REF:0000107 NCBI chr10:35,089,715...35,124,100
Ensembl chr10:34,588,646...34,623,338 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO
IEA		 MGI:3042511 (PMID:19546853)
GO_REF:0000107		 RGD
Ensembl		 PMID:19546853 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15289437)		 Ensembl
RGD		 PMID:15289437 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
atrioventricular node cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within ISO
IEA		 MGI:6358100 (PMID:29666184)
GO_REF:0000107		 RGD
Ensembl		 PMID:29666184 GO_REF:0000107 NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603 		JBrowse link
atrioventricular node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO
IEA		 MGI:3042511 (PMID:15109497)
GO_REF:0000107		 RGD
Ensembl		 PMID:15109497 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15289437)		 Ensembl
RGD		 PMID:15289437 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
cardiac cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA		 (PMID:23342106)
GO_REF:0000107		 RGD
Ensembl		 PMID:23342106 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
cardiac cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isl1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19571884)
GO_REF:0000107
(PMID:19620969)		 RGD
Ensembl		 PMID:19571884 PMID:19620969 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO
IEA		 (PMID:18593560)
GO_REF:0000107		 RGD
Ensembl		 PMID:18593560 GO_REF:0000107 NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,227,836...3,232,598
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO
IEA		 (PMID:19736317)
GO_REF:0000107		 RGD
Ensembl		 PMID:19736317 GO_REF:0000107 NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO MGI:2154539 (PMID:9004034) RGD PMID:9004034 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Tenm4 teneurin transmembrane protein 4 acts_upstream_of_or_within ISO MGI:3655239 (PMID:17350578) RGD PMID:17350578 NCBI chr 1:157,699,611...160,674,549
Ensembl chr 1:150,780,381...151,259,144 		JBrowse link
cardiac fibroblast cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor type 1B IMP RGD PMID:27477354 RGD:151665478 NCBI chr 7:134,164,987...134,208,389
Ensembl chr 7:132,286,275...132,329,673 		JBrowse link
G Inhba inhibin subunit beta A IDA RGD PMID:27477354 RGD:151665478 NCBI chr17:53,787,159...53,810,942
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 involved_in ISO
IEA		 (PMID:19815520)
GO_REF:0000107		 RGD
Ensembl		 PMID:19815520 GO_REF:0000107 NCBI chr17:62,835,055...62,902,331
Ensembl chr17:58,142,625...58,210,622 		JBrowse link
G Alpk2 alpha-kinase 2 involved_in ISO (PMID:29888752) RGD PMID:29888752 NCBI chr18:58,775,603...58,906,150
Ensembl chr18:58,775,605...58,906,258 		JBrowse link
G Alpk3 alpha-kinase 3 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:4206048 (PMID:21441111)		 GO_Central
Ensembl
RGD		 PMID:21441111 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:144,423,690...144,471,534
Ensembl chr 1:135,014,499...135,062,302 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29374072)		 UniProt
RGD		 PMID:29374072 GO_REF:0000024 NCBI chr 6:128,239,550...128,275,833
Ensembl chr 6:122,474,756...122,510,854 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:17450150) RGD PMID:17450150 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO
IEA		 MGI:2684578 (PMID:19535499)
GO_REF:0000107		 RGD
Ensembl		 PMID:19535499 GO_REF:0000107 NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within ISO
IEA		 (PMID:28846746)
GO_REF:0000107		 RGD
Ensembl		 PMID:28846746 GO_REF:0000107 NCBI chr19:50,431,478...50,481,013
Ensembl chr19:33,529,319...33,571,123 		JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:3587803 (PMID:16079292)		 UniProt
RGD		 PMID:16079292 GO_REF:0000024 NCBI chr11:30,469,778...30,516,990
Ensembl chr11:16,982,860...17,030,046 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3641051 (PMID:18256189) RGD PMID:18256189 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO MGI:3712002 (PMID:17322895) RGD PMID:17322895 NCBI chr20:42,101,815...42,126,486
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U acts_upstream_of_or_within ISO MGI:2182095|MGI:5648110 (PMID:26039991) RGD PMID:26039991 NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO
IEA		 MGI:3510641 (PMID:16111892)
GO_REF:0000107		 RGD
Ensembl		 PMID:16111892 GO_REF:0000107 NCBI chr19:11,609,004...12,057,174
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Lrrc10 leucine-rich repeat-containing 10 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3809940 (PMID:23236519)		 GO_Central
RGD		 PMID:23236519 GO_REF:0000033 NCBI chr 7:54,572,935...54,574,332
Ensembl chr 7:52,686,972...52,688,369 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:3041135 (PMID:23994610) RGD PMID:23994610 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Mir208a microRNA 208a acts_upstream_of_or_within ISO MGI:3709980 (PMID:17379774) RGD PMID:17379774 NCBI chr15:32,395,552...32,395,634 JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO
IEA		 MGI:3850506 (PMID:25139234)
GO_REF:0000107		 RGD
Ensembl		 PMID:25139234 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Myh11 myosin heavy chain 11 involved_in ISO
IEA		 (PMID:16444274)
GO_REF:0000107		 RGD
Ensembl		 PMID:16444274 GO_REF:0000107 NCBI chr10:1,250,554...1,345,681
Ensembl chr10:743,685...838,459 		JBrowse link
G Myh6 myosin heavy chain 6 acts_upstream_of_or_within ISO
IEA		 MGI:2182704|MGI:3652543|MGI:3664197 (PMID:10066683), (PMID:15001446), (PMID:8878443), (PMID:9884344)
GO_REF:0000107		 RGD
Ensembl		 PMID:8878443 PMID:9884344 PMID:10066683 PMID:15001446 GO_REF:0000107 NCBI chr15:32,388,102...32,413,663
Ensembl chr15:28,417,616...28,441,720 		JBrowse link
G Myo18b myosin XVIIIb acts_upstream_of_or_within ISO
IEA		 MGI:3829997 (PMID:18761673)
GO_REF:0000107		 RGD
Ensembl		 PMID:18761673 GO_REF:0000107 NCBI chr12:49,421,062...49,614,127
Ensembl chr12:43,747,010...43,953,695 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO
IEA		 MGI:1934018 (PMID:26147524)
GO_REF:0000107		 RGD
Ensembl		 PMID:26147524 GO_REF:0000107 NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO
IEA		 (PMID:19166829), (PMID:21640717)
GO_REF:0000107		 RGD
Ensembl		 PMID:19166829 PMID:21640717 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Plec plectin involved_in ISO
IEA		 MGI:2181791 (PMID:9389647)
GO_REF:0000107		 RGD
Ensembl		 PMID:9389647 GO_REF:0000107 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:5297388|MGI:5645931 (PMID:25190059), (PMID:26883626)		 Ensembl
RGD		 PMID:25190059 PMID:26883626 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Sgcb sarcoglycan, beta acts_upstream_of_or_within ISO MGI:2153048 (PMID:10678176) RGD PMID:10678176 NCBI chr14:34,917,663...34,932,661
Ensembl chr14:34,563,608...34,578,583 		JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2180193 (PMID:23695275) RGD PMID:23695275 NCBI chr10:31,847,713...32,829,554
Ensembl chr10:31,280,511...31,724,840 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within
involved_in		 ISO MGI:4849923 (PMID:21302256)
(PMID:10967099)		 RGD PMID:10967099 PMID:21302256 NCBI chr 6:18,975,498...19,299,704
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Speg striated muscle enriched protein kinase acts_upstream_of_or_within ISO MGI:4830540 (PMID:19118250) RGD PMID:19118250 NCBI chr 9:84,314,387...84,371,816
Ensembl chr 9:76,865,754...76,923,144 		JBrowse link
G Tcap titin-cap involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:83,878,006...83,879,174
Ensembl chr10:83,381,719...83,382,887 		JBrowse link
G Ttn titin involved_in ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931047 (PMID:10229225) RGD PMID:10229225 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Xirp1 xin actin-binding repeat containing 1 acts_upstream_of_or_within ISO MGI:3521795 (PMID:17766470) RGD PMID:17766470 NCBI chr 8:119,744,778...119,757,547
Ensembl chr 8:119,747,419...119,757,349 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO
IEA		 MGI:2180033 (PMID:11923874)
GO_REF:0000107		 RGD
Ensembl		 PMID:11923874 GO_REF:0000107 NCBI chr 5:139,912,395...139,945,532
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain acts_upstream_of_or_within ISO
IEA		 MGI:3692446 (PMID:16121256)
GO_REF:0000107		 RGD
Ensembl		 PMID:16121256 GO_REF:0000107 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Akap13 A-kinase anchoring protein 13 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20139090)		 UniProt
RGD		 PMID:20139090 GO_REF:0000024 NCBI chr 1:138,722,445...139,029,401
Ensembl chr 1:129,314,402...129,619,646 		JBrowse link
G Alpk3 alpha-kinase 3 involved_in ISO
IEA		 (PMID:11418590)
GO_REF:0000107		 RGD
Ensembl		 PMID:11418590 GO_REF:0000107 NCBI chr 1:144,423,690...144,471,534
Ensembl chr 1:135,014,499...135,062,302 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:24335282) RGD PMID:24335282 NCBI chr 5:151,192,014...151,269,291
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISO
ISS		 (PMID:32179481)
GO_REF:0000024		 RGD
UniProt		 PMID:32179481 GO_REF:0000024 NCBI chr 6:128,239,550...128,275,833
Ensembl chr 6:122,474,756...122,510,854 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P21275 (PMID:21145505)
(PMID:21311046)		 Ensembl
RGD		 PMID:21145505 PMID:21311046 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P21274 (PMID:21145505)		 Ensembl
RGD		 PMID:21145505 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G C16h10orf71 similar to human chromosome 10 open reading frame 71 acts_upstream_of_or_within ISO (PMID:38950288) RGD PMID:38950288 NCBI chr16:7,916,901...7,968,280
Ensembl chr16:7,910,433...7,961,958 		JBrowse link
G Cacybp calcyclin binding protein IDA mRNA:increased expression:heart RGD PMID:16440310 RGD:2326117 NCBI chr13:74,970,917...74,981,298
Ensembl chr13:72,437,490...72,450,177 		JBrowse link
G Calr calreticulin IEP RGD PMID:9011638 RGD:2326218 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Cby1 chibby 1, beta catenin antagonist involved_in ISS
ISO		 GO_REF:0000024
(PMID:17261658)		 UniProt
RGD		 PMID:17261658 GO_REF:0000024 NCBI chr 7:113,097,220...113,103,831 JBrowse link
G Cripto cripto, EGF-CFC family member acts_upstream_of_or_within ISO MGI:1857518 (PMID:9876177) RGD PMID:9876177 NCBI chr 8:119,803,182...119,808,714
Ensembl chr 8:110,925,024...110,930,308 		JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within ISO
IEA		 (PMID:28846746)
GO_REF:0000107		 RGD
Ensembl		 PMID:28846746 GO_REF:0000107 NCBI chr19:50,431,478...50,481,013
Ensembl chr19:33,529,319...33,571,123 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of_or_within ISO MGI:3056542|MGI:4829787 (PMID:15342473), (PMID:20713518) RGD PMID:15342473 PMID:20713518 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within IEP
ISO		 MGI:102541|MGI:107516|MGI:3793424|MGI:99458 (PMID:18400219), (PMID:20691899) RGD PMID:18400219 PMID:20691899 PMID:20486789 RGD:5131636 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO MGI:3793425|MGI:95664 (PMID:18400219) RGD PMID:18400219 NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO
IEA		 (PMID:37852253)
GO_REF:0000107		 RGD
Ensembl		 PMID:37852253 GO_REF:0000107 NCBI chr18:1,665,468...1,902,291
Ensembl chr18:1,392,725...1,628,067 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:18545679) RGD PMID:18545679 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 IEP RGD PMID:22021094 RGD:7495752 NCBI chr 1:205,540,649...205,541,758
Ensembl chr 1:196,111,043...196,112,203 		JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO
IEA		 (PMID:19654211)
GO_REF:0000107		 RGD
Ensembl		 PMID:19654211 GO_REF:0000107 NCBI chr10:63,930,629...63,936,174
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1859153 (PMID:19654211) RGD PMID:19654211 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO MGI:2154539 (PMID:9004034) RGD PMID:9004034 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Kdm6b lysine demethylase 6B involved_in ISO
IEA		 (PMID:23856522)
GO_REF:0000107		 RGD
Ensembl		 PMID:23856522 GO_REF:0000107 NCBI chr10:54,619,520...54,641,014
Ensembl chr10:54,121,848...54,130,794 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:102541|MGI:95664|MGI:97350 (PMID:19035347), (PMID:20691899) RGD PMID:19035347 PMID:20691899 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO
IEA		 (PMID:18297060)
GO_REF:0000107		 RGD
Ensembl		 PMID:18297060 GO_REF:0000107 NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11439182)
(PMID:14645532)		 GO_Central
RGD		 PMID:11439182 PMID:14645532 GO_REF:0000033 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEP
IEA
ISO		 GO_REF:0000107
(PMID:9857019)
MGI:1857618|MGI:3655239|MGI:99458 (PMID:10021345), (PMID:17234970), (PMID:19035347)		 Ensembl
RGD		 PMID:9857019 PMID:10021345 PMID:17234970 PMID:19035347 PMID:20486789 GO_REF:0000107, RGD:5131636 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nox4 NADPH oxidase 4 acts_upstream_of_or_within ISO
IEA		 (PMID:16775014)
GO_REF:0000107		 RGD
Ensembl		 PMID:16775014 GO_REF:0000107 NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:17336907) RGD PMID:17336907 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2136268|MGI:2445428 (PMID:12397115), (PMID:17234970) RGD PMID:12397115 PMID:17234970 NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:20140255)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20140255 GO_REF:0000024 GO_REF:0000107 NCBI chr20:9,947,104...9,958,729
Ensembl chr20:9,947,396...9,958,991 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO
IEA		 (PMID:29555651)
GO_REF:0000107		 RGD
Ensembl		 PMID:29555651 GO_REF:0000107 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 acts_upstream_of_or_within ISO
IEA		 (PMID:19011045)
GO_REF:0000107		 RGD
Ensembl		 PMID:19011045 GO_REF:0000107 NCBI chr 5:150,859,412...150,913,525
Ensembl chr 5:145,576,334...145,629,624 		JBrowse link
G Sox6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:14530442) RGD PMID:14530442 NCBI chr 1:179,157,678...179,769,243
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 IEP RGD PMID:25339194 RGD:13209018 NCBI chr 1:43,917,640...44,388,802
Ensembl chr 1:41,512,030...41,983,322 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:2655214 (PMID:17234970)
GO_REF:0000107		 RGD
Ensembl		 PMID:17234970 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:95664|MGI:99458 (PMID:20691899)
GO_REF:0000107
(PMID:11431700)		 RGD
Ensembl		 PMID:11431700 PMID:20691899 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Timm44 translocase of inner mitochondrial membrane 44 IEP RGD PMID:12388124 RGD:13463596 NCBI chr12:7,410,424...7,428,179
Ensembl chr12:2,612,581...2,629,351 		JBrowse link
G Tsc1 TSC complex subunit 1 acts_upstream_of_or_within ISO
IEA		 MGI:2183146 (PMID:11438694)
GO_REF:0000107		 RGD
Ensembl		 PMID:11438694 GO_REF:0000107 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:11,979,729...12,015,674 		JBrowse link
cardiac muscle cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:19506109)
GO_REF:0000107		 RGD
Ensembl		 PMID:19506109 GO_REF:0000107 NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (PMID:22711842) RGD PMID:22711842 NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO
IEA		 MGI:3710254 (PMID:18467625)
GO_REF:0000107		 RGD
Ensembl		 PMID:18467625 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:20559569)
GO_REF:0000107
MGI:2143322 (PMID:21554246)		 RGD
Ensembl		 PMID:20559569 PMID:21554246 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:21654746) RGD PMID:21654746 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
cardiac muscle cell myoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:18545679) RGD PMID:18545679 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Isl1 ISL LIM homeobox 1 acts_upstream_of_or_within ISO
IEA		 (PMID:19620969)
GO_REF:0000107		 RGD
Ensembl		 PMID:19620969 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO MGI:2154539 (PMID:9004034) RGD PMID:9004034 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Myocd myocardin involved_in ISO (PMID:15907818) RGD PMID:15907818 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:20007915)
GO_REF:0000107		 RGD
Ensembl		 PMID:20007915 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO
IEA		 (PMID:17336907)
GO_REF:0000107		 RGD
Ensembl		 PMID:17336907 GO_REF:0000107 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Rbm10 RNA binding motif protein 10 IEP RGD PMID:24178303 RGD:151667450 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (PMID:21311046) RGD PMID:21311046 NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:21199191)		 UniProt
RGD		 PMID:21199191 GO_REF:0000024 NCBI chr14:31,213,415...31,233,451
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Srf serum response factor involved_in ISO
IEA		 UniProtKB:Q9JM73 (PMID:19783823)
GO_REF:0000107
UniProtKB:P11831 (PMID:19783823)		 RGD
Ensembl		 PMID:19783823 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO
IEA		 (PMID:15459098)
GO_REF:0000107		 RGD
Ensembl		 PMID:15459098 GO_REF:0000107 NCBI chr10:71,177,082...71,186,275
Ensembl chr10:70,679,518...70,688,529 		JBrowse link
G Tbxt T-box transcription factor T involved_in ISO
IEA		 (PMID:21632880)
GO_REF:0000107		 RGD
Ensembl		 PMID:21632880 GO_REF:0000107 NCBI chr 1:54,845,674...54,859,340
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
cardiac muscle thin filament assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neb nebulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:57,022,822...57,220,752
Ensembl chr 3:36,613,716...36,811,574 		JBrowse link
G Nebl nebulette involved_in ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:11822876), (PMID:18823973)		 UniProt
Ensembl
GO_Central
RGD		 PMID:11822876 PMID:18823973 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:85,022,953...85,374,848
Ensembl chr17:80,118,543...80,466,210 		JBrowse link
G Nrap nebulin-related anchoring protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:265,355,324...265,433,229
Ensembl chr 1:255,350,113...255,427,693 		JBrowse link
cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 acts_upstream_of_or_within ISO
IEA		 MGI:2180072 (PMID:9114002)
GO_REF:0000107		 RGD
Ensembl		 PMID:9114002 GO_REF:0000107 NCBI chr 3:121,266,291...121,271,827
Ensembl chr 3:100,811,987...100,817,523 		JBrowse link
G Adprhl1 ADP-ribosylhydrolase like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr16:82,985,355...83,017,240
Ensembl chr16:76,283,103...76,354,440 		JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12507422)		 Ensembl
RGD		 PMID:12507422 GO_REF:0000107 NCBI chr 1:107,664,338...107,682,916
Ensembl chr 1:98,528,068...98,546,653 		JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5440613 (PMID:23213483)		 GO_Central
RGD		 PMID:23213483 GO_REF:0000033 NCBI chr18:16,267,830...16,700,508
Ensembl chr18:15,993,324...16,425,796 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO
IEA		 MGI:2386445 (PMID:9356462)
GO_REF:0000107		 RGD
Ensembl		 PMID:9356462 GO_REF:0000107 NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Myl2 myosin light chain 2 acts_upstream_of_or_within ISO MGI:2385922 (PMID:9422794) RGD PMID:9422794 NCBI chr12:40,114,964...40,126,236
Ensembl chr12:34,454,218...34,468,983 		JBrowse link
G Mylk3 myosin light chain kinase 3 involved_in IMP
IBA		 PMID:17885681
GO_REF:0000033		 GO_Central PMID:17885681 GO_REF:0000033, RGD:8554371 NCBI chr19:37,858,298...37,916,805
Ensembl chr19:21,691,929...21,742,954 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA
ISO
ISS		 GO_REF:0000107
UniProtKB:P05622 (PMID:11239463)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11239463 GO_REF:0000024 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:P26618 (PMID:11239463)		 UniProt
RGD		 PMID:11239463 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO
IEA		 MGI:3522206|MGI:3522214 (PMID:15569937)
GO_REF:0000107		 RGD
Ensembl		 PMID:15569937 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Tcap titin-cap involved_in ISO
IBA		 (PMID:9817758)
GO_REF:0000033		 RGD
GO_Central		 PMID:9817758 GO_REF:0000033 NCBI chr10:83,878,006...83,879,174
Ensembl chr10:83,381,719...83,382,887 		JBrowse link
G Ttn titin involved_in
acts_upstream_of_or_within		 ISO (PMID:11846417), (PMID:9817758)
MGI:3654306 (PMID:16702235)		 RGD PMID:9817758 PMID:11846417 PMID:16702235 NCBI chr 3:82,059,648...82,332,130
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
cardiac neural crest cell development involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2179740 (PMID:11694877) RGD PMID:11694877 NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO
IEA		 MGI:1346859 (PMID:18952847)
GO_REF:0000107		 RGD
Ensembl		 PMID:18952847 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (PMID:18952847) RGD PMID:18952847 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
cardiac neural crest cell development involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:21098571) RGD PMID:21098571 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in ISO
IEA		 (PMID:19008477)
GO_REF:0000107		 RGD
Ensembl		 PMID:19008477 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO
IEA		 (PMID:19609448)
GO_REF:0000107		 RGD
Ensembl		 PMID:19609448 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19509466)		 Ensembl
RGD		 PMID:19509466 GO_REF:0000107 NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (PMID:18539270) RGD PMID:18539270 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
cardiac neural crest cell differentiation involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:38951500) RGD PMID:38951500 NCBI chr19:67,848,836...68,007,491
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:19705442) RGD PMID:19705442 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (PMID:31219639) RGD PMID:31219639 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Edn1 endothelin 1 involved_in ISO
IEA		 (PMID:31219639)
GO_REF:0000107		 RGD
Ensembl		 PMID:31219639 GO_REF:0000107 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO		 GO_REF:0000107
MGI:1857473|MGI:2687362 (PMID:31219639)		 Ensembl
RGD		 PMID:31219639 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO
IEA		 (PMID:17286298)
GO_REF:0000107		 RGD
Ensembl		 PMID:17286298 GO_REF:0000107 NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO
IEA		 MGI:2386570|MGI:3803647 (PMID:20144608)
GO_REF:0000107		 RGD
Ensembl		 PMID:20144608 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Nrp1 neuropilin 1 NOT|involved_in ISO (PMID:26053665) RGD PMID:26053665 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (PMID:12464179) RGD PMID:12464179 NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265 (PMID:18539270) RGD PMID:18539270 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
cardiac neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcam1 vascular cell adhesion molecule 1 IMP RGD PMID:12486170 RGD:628409 NCBI chr 2:206,723,050...206,742,783
Ensembl chr 2:204,038,114...204,057,958 		JBrowse link
cardiac pacemaker cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within ISO
IEA		 MGI:6358100 (PMID:29666184)
GO_REF:0000107		 RGD
Ensembl		 PMID:29666184 GO_REF:0000107 NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:175,508,912...175,515,603 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in ISO
IEA		 (PMID:19166829)
GO_REF:0000107		 RGD
Ensembl		 PMID:19166829 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
cardiac vascular smooth muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO
IEA		 MGI:2447620 (PMID:20619341)
GO_REF:0000107		 RGD
Ensembl		 PMID:20619341 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:21311046)
GO_REF:0000107		 RGD
Ensembl		 PMID:21311046 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:18093989) RGD PMID:18093989 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata6 GATA binding protein 6 involved_in ISO (PMID:11889139), (PMID:12615657) RGD PMID:11889139 PMID:12615657 NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO
IEA		 (PMID:18297060)
GO_REF:0000107		 RGD
Ensembl		 PMID:18297060 GO_REF:0000107 NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO MGI:2676830 (PMID:19816508) RGD PMID:19816508 NCBI chr18:57,371,349...57,371,453
Ensembl chr18:55,101,006...55,101,110 		JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO MGI:2676828 (PMID:19816508) RGD PMID:19816508 NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
G Myocd myocardin involved_in IDA PMID:16151017 BHF-UCL PMID:16151017 RGD:8554320 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO
IEA		 MGI:3522206|MGI:3522214 (PMID:15569937)
GO_REF:0000107		 RGD
Ensembl		 PMID:15569937 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
cardioblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin acts_upstream_of_or_within ISO
IEA		 MGI:3774028 (PMID:21822279)
GO_REF:0000107		 RGD
Ensembl		 PMID:21822279 GO_REF:0000107 NCBI chr 8:127,059,215...127,067,070
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IEA
ISS		 (PMID:15896309)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15896309 GO_REF:0000024 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A acts_upstream_of_or_within ISO MGI:104774 (PMID:12782680) RGD PMID:12782680 NCBI chr15:45,005,648...45,111,416
Ensembl chr15:40,832,534...40,927,500 		JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:104773 (PMID:12782680) RGD PMID:12782680 NCBI chr10:28,756,461...28,874,831
Ensembl chr10:28,255,025...28,312,919 		JBrowse link
G Agt angiotensinogen IDA RGD PMID:21376054 RGD:5129173 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:21173078 RGD:6903878 NCBI chr  X:116,914,320...116,918,504
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Akap13 A-kinase anchoring protein 13 IMP RGD PMID:18951085 RGD:2312638 NCBI chr 1:138,722,445...139,029,401
Ensembl chr 1:129,314,402...129,619,646 		JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 acts_upstream_of_or_within ISO (PMID:29065170) RGD PMID:29065170 NCBI chr15:26,871,842...26,889,421
Ensembl chr15:24,398,419...24,398,922 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:21554860 RGD:6907064 NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Gata4 GATA binding protein 4 IDA RGD PMID:20971938 RGD:5131529 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IDA RGD PMID:27854077 RGD:13792737 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 IMP RGD PMID:9769323 RGD:7495831 NCBI chr10:50,842,348...50,947,063
Ensembl chr10:50,344,915...50,447,993 		JBrowse link
G Meis1 Meis homeobox 1 IMP RGD PMID:26597775 RGD:11554891 NCBI chr14:97,356,949...97,499,646
Ensembl chr14:93,155,419...93,294,265 		JBrowse link
G Myl2 myosin light chain 2 IEP RGD PMID:7657802 RGD:1580138 NCBI chr12:40,114,964...40,126,236
Ensembl chr12:34,454,218...34,468,983 		JBrowse link
G Myocd myocardin IMP RGD PMID:18772130 RGD:5132877 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Nppa natriuretic peptide A IEP RGD PMID:7657802 RGD:1580138 NCBI chr 5:163,712,184...163,713,493
Ensembl chr 5:158,429,042...158,430,351 		JBrowse link
G Nppb natriuretic peptide B IEP RGD PMID:7657802 RGD:1580138 NCBI chr 5:163,699,955...163,701,314
Ensembl chr 5:158,416,866...158,418,168 		JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IGI PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:230,952,248...231,120,275 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:19542178 RGD:7775063 NCBI chr 1:237,818,950...239,052,184
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
G Sorbs2 sorbin and SH3 domain containing 2 involved_in IGI PMID:24743145 BHF-UCL PMID:24743145 RGD:10054083 NCBI chr16:53,167,795...53,481,300
Ensembl chr16:46,435,237...46,626,514 		JBrowse link
endocardial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 involved_in ISO
IEA		 (PMID:20890042)
GO_REF:0000107		 RGD
Ensembl		 PMID:20890042 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO
IEA		 (PMID:17336907)
GO_REF:0000107		 RGD
Ensembl		 PMID:17336907 GO_REF:0000107 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21330551)		 Ensembl
RGD		 PMID:21330551 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO
IEA		 MGI:103559 (PMID:17610846)
GO_REF:0000107		 RGD
Ensembl		 PMID:17610846 GO_REF:0000107 NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within ISO MGI:107543 (PMID:17610846) RGD PMID:17610846 NCBI chr 3:189,163,000...189,164,802
Ensembl chr 3:168,785,490...168,787,290 		JBrowse link
endocardial cushion cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag1 jagged canonical Notch ligand 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19509466)		 Ensembl
RGD		 PMID:19509466 GO_REF:0000107 NCBI chr 3:144,859,453...144,894,883
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:19506109)
GO_REF:0000107		 RGD
Ensembl		 PMID:19506109 GO_REF:0000107 NCBI chr 3:63,387,378...63,506,980
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
epicardium-derived cardiac fibroblast cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:17704211) RGD PMID:17704211 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
epithelial to mesenchymal transition involved in cardiac fibroblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir21 microRNA 21 involved_in ISO (PMID:23441172) RGD PMID:23441172 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G Pdcd4 programmed cell death 4 involved_in IGI PMID:23441172 BHF-UCL PMID:23441172 RGD:10400865 NCBI chr 1:262,912,659...262,949,581
Ensembl chr 1:252,921,392...252,944,275 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 involved_in IGI PMID:23441172 BHF-UCL PMID:23441172 RGD:10400865 NCBI chr 2:122,484,995...122,490,008
Ensembl chr 2:120,556,706...120,566,189 		JBrowse link
His-Purkinje system cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx3 iroquois homeobox 3 involved_in ISO
IEA		 (PMID:26786475)
GO_REF:0000107		 RGD
Ensembl		 PMID:26786475 GO_REF:0000107 NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
negative regulation of cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
IEA
ISS		 (PMID:18545679)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18545679 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Ccnd2 cyclin D2 IDA RGD PMID:27302109 RGD:151660350 NCBI chr 4:161,653,048...161,675,422
Ensembl chr 4:159,962,363...159,989,495 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:20559569) RGD PMID:20559569 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (PMID:18371447) RGD PMID:18371447 NCBI chr 1:64,985,161...64,993,274
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 involved_in ISO
IEA		 UniProtKB:O75084 (PMID:23939491)
GO_REF:0000107		 RGD
Ensembl		 PMID:23939491 GO_REF:0000107 NCBI chr 7:54,597,182...54,678,656
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Fzd7 frizzled class receptor 7 involved_in ISO
IEA		 UniProtKB:Q8WU20 (PMID:23939491)
GO_REF:0000107		 RGD
Ensembl		 PMID:23939491 GO_REF:0000107 NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
G Hdac3 histone deacetylase 3 acts_upstream_of_or_within ISO
IEA		 (PMID:24565863)
GO_REF:0000107		 RGD
Ensembl		 PMID:24565863 GO_REF:0000107 NCBI chr18:30,021,847...30,041,061
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO
IEA		 (PMID:20081117)
GO_REF:0000107		 RGD
Ensembl		 PMID:20081117 GO_REF:0000107 NCBI chr 1:179,157,678...179,769,243
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
negative regulation of cardiac muscle cell myoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA		 (PMID:21199191)
GO_REF:0000107		 RGD
Ensembl		 PMID:21199191 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16151019)		 Ensembl
RGD		 PMID:16151019 GO_REF:0000107 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
negative regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in IDA PMID:16151017 BHF-UCL PMID:16151017 RGD:8554320 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
negative regulation of cardiocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor involved_in ISO (PMID:23069713) RGD PMID:23069713 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
negative regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 IMP RGD PMID:19358331 RGD:2312604 NCBI chr10:74,118,232...74,151,366
Ensembl chr10:73,621,883...73,653,896 		JBrowse link
G Cav3 caveolin 3 IMP RGD PMID:21170593 RGD:6784534 NCBI chr 4:147,137,993...147,153,967
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Ctdp1 CTD phosphatase subunit 1 IMP RGD PMID:22569295 RGD:9686371 NCBI chr18:76,129,243...76,193,404
Ensembl chr18:73,854,282...73,916,457 		JBrowse link
G Foxp1 forkhead box P1 IMP RGD PMID:26333362 RGD:11561912 NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G G6pd glucose-6-phosphate dehydrogenase IMP RGD PMID:24190878 RGD:10449133 NCBI chr  X:157,352,364...157,372,144
Ensembl chr  X:152,201,098...152,220,801 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:20516643) RGD PMID:20516643 NCBI chr 1:89,943,669...89,953,514
Ensembl chr 1:80,815,850...80,825,802 		JBrowse link
G Mir451a microRNA 451a IMP RGD PMID:25209900 RGD:11558015 NCBI chr10:63,459,569...63,459,640
Ensembl chr10:62,961,520...62,961,591 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IMP RGD PMID:22082674 RGD:11533929 NCBI chr 1:161,522,399...161,637,623
Ensembl chr 1:152,111,188...152,226,383 		JBrowse link
G Pi16 peptidase inhibitor 16 acts_upstream_of_or_within ISO (PMID:17909105) RGD PMID:17909105 NCBI chr20:7,377,739...7,387,003
Ensembl chr20:7,376,126...7,385,383 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha IMP RGD PMID:22198280 RGD:5687133 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Rbm10 RNA binding motif protein 10 IMP RGD PMID:30257214 RGD:151667449 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rgs2 regulator of G-protein signaling 2 IMP RGD PMID:16380388 RGD:13524577 NCBI chr13:58,350,063...58,352,666
Ensembl chr13:55,798,829...55,802,385 		JBrowse link
G Rgs4 regulator of G-protein signaling 4 IDA RGD PMID:9918533 RGD:7207376 NCBI chr13:84,469,593...84,475,884
Ensembl chr13:81,936,775...81,943,068 		JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 IMP RGD PMID:25022898 RGD:13464131 NCBI chr11:56,847,837...56,886,302
Ensembl chr11:43,377,216...43,417,202 		JBrowse link
G Yy1 YY1 transcription factor IMP RGD PMID:18632988 RGD:9588273 NCBI chr 6:133,471,615...133,500,875
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zfp418 zinc finger protein 418 acts_upstream_of_or_within ISO (PMID:29065170) RGD PMID:29065170 NCBI chr 1:75,614,531...75,627,367
Ensembl chr 1:66,581,287...66,594,242 		JBrowse link
neural crest cell migration involved in heart formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in ISO
IEA		 (PMID:17286298)
GO_REF:0000107		 RGD
Ensembl		 PMID:17286298 GO_REF:0000107 NCBI chr 1:165,631,462...165,650,430
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
positive regulation of cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin, beta 2 involved_in ISO (PMID:24974728) RGD PMID:24974728 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850 		JBrowse link
G Efnb2 ephrin B2 involved_in ISO
IEA		 (PMID:17336907)
GO_REF:0000107		 RGD
Ensembl		 PMID:17336907 GO_REF:0000107 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:80,783,417...80,824,391 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:24974728) RGD PMID:24974728 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Kat2a lysine acetyltransferase 2A IMP RGD PMID:20835911 RGD:8693751 NCBI chr10:86,132,535...86,140,877
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(PMID:9857019)
(PMID:16680724)		 UniProt
RGD		 PMID:9857019 PMID:16680724 GO_REF:0000024 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:20081117), (PMID:23939491) RGD PMID:20081117 PMID:23939491 NCBI chr18:2,160,327...2,160,413 JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:20081117), (PMID:23939491) RGD PMID:20081117 PMID:23939491 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201 		JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:22982025) RGD PMID:22982025 NCBI chr 1:229,743,461...229,743,570
Ensembl chr 1:220,316,931...220,317,040 		JBrowse link
G Mir499a microRNA 499a involved_in ISO (PMID:20081117) RGD PMID:20081117 NCBI chr 3:144,110,469...144,110,533
Ensembl chr 3:144,110,469...144,110,533 		JBrowse link
G Myocd myocardin involved_in ISO (PMID:18451334) RGD PMID:18451334 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:17336907) RGD PMID:17336907 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
IEA		 (PMID:25163461)
GO_REF:0000107		 RGD
Ensembl		 PMID:25163461 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of ISO
IEA		 (PMID:20559569)
GO_REF:0000107		 RGD
Ensembl		 PMID:20559569 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
positive regulation of cardiac muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
IEA
ISS		 (PMID:20702560)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20702560 GO_REF:0000024 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P23359 (PMID:23863481)		 Ensembl
RGD		 PMID:23863481 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO
IEA		 UniProtKB:P21275 (PMID:23863481)
GO_REF:0000107		 RGD
Ensembl		 PMID:23863481 GO_REF:0000107 NCBI chr 3:182,059,318...182,135,273
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Sema3c semaphorin 3C involved_in ISO
IEA		 (PMID:26053665)
GO_REF:0000107		 RGD
Ensembl		 PMID:26053665 GO_REF:0000107 NCBI chr 4:18,538,452...18,702,453
Ensembl chr 4:17,583,212...17,746,534 		JBrowse link
positive regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO (PMID:23840305) RGD PMID:23840305 NCBI chr12:20,331,073...20,336,527
Ensembl chr12:15,217,442...15,221,889 		JBrowse link
positive regulation of cardioblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx36 DEAH-box helicase 36 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26489465)		 UniProt
Ensembl
RGD		 PMID:26489465 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11889119)		 Ensembl
RGD		 PMID:11889119 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:11431700)		 UniProt
Ensembl
RGD		 PMID:11431700 GO_REF:0000024 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15896309)		 AgBase
Ensembl
RGD		 PMID:15896309 GO_REF:0000024 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
positive regulation of cardiocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:57,381,282...57,597,989
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Mir133a1 microRNA 133a-1 involved_in ISO (PMID:23069713) RGD PMID:23069713 NCBI chr18:2,157,872...2,157,958 JBrowse link
G Mir3582 microRNA 3582 involved_in ISO (PMID:23069713) RGD PMID:23069713 NCBI chr18:2,157,853...2,157,970
Ensembl chr18:1,885,063...1,885,180 		JBrowse link
positive regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18194989 RGD:5129139 NCBI chr 1:265,777,103...265,780,114
Ensembl chr 1:255,771,597...255,807,259 		JBrowse link
G Akap6 A-kinase anchoring protein 6 IMP
IDA		 RGD PMID:21550986 PMID:16306226 RGD:6902940, RGD:2312613 NCBI chr 6:75,919,350...76,359,667
Ensembl chr 6:70,184,175...70,619,738 		JBrowse link
G Ccn4 cellular communication network factor 4 IMP RGD PMID:21376054 RGD:5129173 NCBI chr 7:100,534,578...100,566,287
Ensembl chr 7:98,645,182...98,677,248 		JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:20116367 RGD:10401141 NCBI chr20:3,577,200...3,589,651
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Edn1 endothelin 1 involved_in ISO
IEA		 RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217)
GO_REF:0000107		 RGD
Ensembl		 PMID:24117217 GO_REF:0000107 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:12724418 RGD:2312280 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Fdps farnesyl diphosphate synthase IMP RGD PMID:19716825 RGD:2316294 NCBI chr 2:176,795,192...176,804,816
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G Hamp hepcidin antimicrobial peptide IMP RGD PMID:24424338 RGD:11041632 NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:86,170,901...86,172,891 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217)
GO_REF:0000107		 RGD
Ensembl		 PMID:24117217 GO_REF:0000107 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of ISO UniProtKB:P05019 (PMID:24117217) RGD PMID:24117217 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of ISO UniProtKB:P05019 (PMID:24117217) RGD PMID:24117217 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir19b2 microRNA 19b-2 acts_upstream_of ISO UniProtKB:P05019 (PMID:24117217) RGD PMID:24117217 NCBI chr  X:137,343,058...137,343,153
Ensembl chr  X:132,422,072...132,422,167 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21318349 PMID:21933187 RGD:10040977, RGD:10040978 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IMP RGD PMID:22989630 RGD:7174736 NCBI chr18:31,522,783...31,644,508
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 IMP RGD PMID:23261455 RGD:13514044 NCBI chr15:26,494,722...26,517,893
Ensembl chr15:24,034,106...24,044,338 		JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 IMP RGD PMID:23487407 RGD:8693424 NCBI chr 8:27,465,538...27,477,016
Ensembl chr 8:19,189,373...19,200,785 		JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:25281201 RGD:13514043 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc25a4 solute carrier family 25 member 4 IDA RGD PMID:21325829 RGD:9681466 NCBI chr16:52,805,521...52,809,316
Ensembl chr16:46,072,939...46,076,733 		JBrowse link
G Trip10 thyroid hormone receptor interactor 10 IMP RGD PMID:23915320 RGD:11535145 NCBI chr 9:2,219,695...2,234,771
Ensembl chr 9:2,133,671...2,147,799 		JBrowse link
Purkinje myocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO
IEA		 MGI:1857618 (PMID:17250822)
GO_REF:0000107		 RGD
Ensembl		 PMID:17250822 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
regulation of cardiac cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox17 SRY-box transcription factor 17 involved_in ISO
IEA		 (PMID:17360443)
GO_REF:0000107		 RGD
Ensembl		 PMID:17360443 GO_REF:0000107 NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin NOT|involved_in ISO (PMID:17628518) RGD PMID:17628518 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
regulation of cell growth involved in cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col14a1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO
IEA		 MGI:3846440 (PMID:22906538)
GO_REF:0000107		 RGD
Ensembl		 PMID:22906538 GO_REF:0000107 NCBI chr 7:88,611,827...88,826,939
Ensembl chr 7:86,722,094...86,937,214 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A IMP RGD PMID:21273244 RGD:401940178 NCBI chr11:47,360,824...47,479,033
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
sinoatrial node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isl1 ISL LIM homeobox 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26193633)		 Ensembl
RGD		 PMID:26193633 GO_REF:0000107 NCBI chr 2:49,813,618...49,823,442
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Popdc1 popeye domain cAMP effector 1 acts_upstream_of_or_within ISO MGI:2385915 (PMID:22354168) RGD PMID:22354168 NCBI chr20:50,401,611...50,442,653
Ensembl chr20:48,822,308...48,857,472 		JBrowse link
G Popdc2 popeye domain cAMP effector 2 acts_upstream_of_or_within ISO MGI:3773727 (PMID:22354168) RGD PMID:22354168 NCBI chr11:75,850,068...75,897,094
Ensembl chr11:62,374,759...62,390,756 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21640717)		 Ensembl
RGD		 PMID:21640717 GO_REF:0000107 NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in ISO
IEA		 (PMID:23242162)
GO_REF:0000107		 RGD
Ensembl		 PMID:23242162 GO_REF:0000107 NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:22130515)
GO_REF:0000107
MGI:3710254 (PMID:19096026)		 RGD
Ensembl		 PMID:19096026 PMID:22130515 GO_REF:0000107 NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
sinoatrial node cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO
IEA		 (PMID:18297060)
GO_REF:0000107		 RGD
Ensembl		 PMID:18297060 GO_REF:0000107 NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
sinoatrial node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box transcription factor 18 involved_in ISO
IEA		 (PMID:23242162)
GO_REF:0000107		 RGD
Ensembl		 PMID:23242162 GO_REF:0000107 NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
ventricular cardiac muscle cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO
IEA		 MGI:3050453|MGI:3663625 (PMID:17450150)
GO_REF:0000107		 RGD
Ensembl		 PMID:17450150 GO_REF:0000107 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in IEA
ISO		 GO_REF:0000107
(PMID:16798733)		 Ensembl
RGD		 PMID:16798733 GO_REF:0000107 NCBI chr 4:121,423,936...121,439,094
Ensembl chr 4:119,872,045...119,878,627 		JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr 2:33,646,252...33,655,225
Ensembl chr 2:31,912,193...31,921,172 		JBrowse link
G Cdk1 cyclin-dependent kinase 1 IEP RGD PMID:15253691 RGD:2301353 NCBI chr20:19,265,252...19,280,456
Ensembl chr20:19,266,248...19,281,408 		JBrowse link
G Fhl2 four and a half LIM domains 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15509787)		 Ensembl
RGD		 PMID:15509787 GO_REF:0000107 NCBI chr 9:52,881,091...52,954,540
Ensembl chr 9:45,388,981...45,431,192 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO
IEA		 (PMID:17332425)
GO_REF:0000107		 RGD
Ensembl		 PMID:17332425 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Lmna lamin A/C acts_upstream_of_or_within ISO MGI:2177930 (PMID:14755333) RGD PMID:14755333 NCBI chr 2:176,237,564...176,265,301
Ensembl chr 2:173,939,751...173,960,423 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO
IEA		 MGI:2386445|MGI:3052104 (PMID:12893741)
GO_REF:0000107		 RGD
Ensembl		 PMID:12893741 GO_REF:0000107 NCBI chr10:53,891,955...54,024,032
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:50,852,965...50,857,060
Ensembl chr15:44,443,101...44,447,247 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:2386742 (PMID:18292603) RGD PMID:18292603 NCBI chr 2:220,391,417...220,411,588
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
ventricular cardiac muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(PMID:16680724)		 UniProt
RGD		 PMID:16680724 GO_REF:0000024 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Myocd myocardin acts_upstream_of_or_within ISO MGI:3052940 (PMID:21357509) RGD PMID:21357509 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:9553078) RGD PMID:9553078 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO
IEA		 MGI:1857622 (PMID:9428411)
GO_REF:0000107		 RGD
Ensembl		 PMID:9428411 GO_REF:0000107 NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO
IEA		 MGI:1857851 (PMID:9428411)
GO_REF:0000107		 RGD
Ensembl		 PMID:9428411 GO_REF:0000107 NCBI chr15:10,837,252...11,482,037
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:2136274|MGI:98215 (PMID:9428411) RGD PMID:9428411 NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta acts_upstream_of_or_within ISO MGI:1857822|MGI:98214 (PMID:9428411) RGD PMID:9428411 NCBI chr20:4,818,707...4,824,968
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
ventricular cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2a myocyte enhancer factor 2a involved_in ISO
IEA		 (PMID:12379849)
GO_REF:0000107		 RGD
Ensembl		 PMID:12379849 GO_REF:0000107 NCBI chr 1:130,258,083...130,392,819
Ensembl chr 1:120,850,080...120,981,948 		JBrowse link
G Nkx2-5 NK2 homeobox 5 acts_upstream_of_or_within ISO
IEA		 MGI:3042511 (PMID:19546853)
GO_REF:0000107		 RGD
Ensembl		 PMID:19546853 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA		 (PMID:19091769)
GO_REF:0000107		 RGD
Ensembl		 PMID:19091769 GO_REF:0000107 NCBI chr13:104,196,615...104,251,007
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      cellular developmental process 4838
        cell differentiation 4837
          cardiocyte differentiation 211
            cardiac cell development + 127
            cardiac cell fate commitment + 14
            cardiac endothelial cell differentiation + 6
            cardiac fibroblast cell differentiation + 6
            cardiac glial cell differentiation + 0
            cardiac muscle cell differentiation + 170
            cardiac neural crest cell differentiation involved in heart development + 20
            cardiac neuron differentiation + 1
            cardiac septum cell differentiation + 5
            cardiac vascular smooth muscle cell differentiation + 10
            cardioblast differentiation + 18
            endocardial cushion cell differentiation + 2
            heart valve cell differentiation 0
            negative regulation of cardiocyte differentiation + 12
            positive regulation of cardiocyte differentiation + 22
            regulation of cardiocyte differentiation + 35
Path 2
Term Annotations click to browse term
  biological_process 20567
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            circulatory system development 1387
              heart development 750
                cardiocyte differentiation 211
                  cardiac cell development + 127
                  cardiac cell fate commitment + 14
                  cardiac endothelial cell differentiation + 6
                  cardiac fibroblast cell differentiation + 6
                  cardiac glial cell differentiation + 0
                  cardiac muscle cell differentiation + 170
                  cardiac neural crest cell differentiation involved in heart development + 20
                  cardiac neuron differentiation + 1
                  cardiac septum cell differentiation + 5
                  cardiac vascular smooth muscle cell differentiation + 10
                  cardioblast differentiation + 18
                  endocardial cushion cell differentiation + 2
                  heart valve cell differentiation 0
                  negative regulation of cardiocyte differentiation + 12
                  positive regulation of cardiocyte differentiation + 22
                  regulation of cardiocyte differentiation + 35
paths to the root