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ONTOLOGY REPORT - ANNOTATIONS

Term:secretory granule lumen
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Accession:GO:0034774 term browser browse the term
Definition:The volume enclosed by the membrane of a secretory granule.

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secretory granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase located_in ISO (PMID:7961964) UniProt PMID:7961964 NCBI chrNW_004624760:2,016,066...2,030,240
Ensembl chrNW_004624760:2,015,474...2,029,939 		JBrowse link
G Serpini1 serpin family I member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:45,698,714...45,791,744
Ensembl chrNW_004624730:45,739,911...45,795,570 		JBrowse link
chromaffin granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbh dopamine beta-hydroxylase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624760:2,016,066...2,030,240
Ensembl chrNW_004624760:2,015,474...2,029,939 		JBrowse link
G Penk proenkephalin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624886:3,595,485...3,613,117
Ensembl chrNW_004624886:3,595,450...3,613,593 		JBrowse link
neuronal dense core vesicle lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 is_active_in ISO PMID:9792613 SynGO PMID:9792613 RGD:2312463 NCBI chrNW_004624770:11,359,606...11,375,833
Ensembl chrNW_004624770:11,358,286...11,375,813 		JBrowse link
G Cck cholecystokinin is_active_in ISO PMID:6084830 SynGO PMID:6084830 RGD:405650225 NCBI chrNW_004624730:77,310,080...77,314,258
Ensembl chrNW_004624730:77,309,633...77,314,384 		JBrowse link
G Crh corticotropin releasing hormone is_active_in ISO PMID:19003957 SynGO PMID:19003957 RGD:405650366 NCBI chrNW_004624744:25,194,458...25,196,658
Ensembl chrNW_004624744:25,194,495...25,196,488 		JBrowse link
G Ghrl ghrelin and obestatin prepropeptide is_active_in
located_in		 ISO
IEA		 (PMID:12597862) SynGO
Ensembl		 PMID:12597862 GO_REF:0000107 NCBI chrNW_004624731:5,257,813...5,262,878
Ensembl chrNW_004624731:5,257,830...5,262,473 		JBrowse link
G Hcrt hypocretin neuropeptide precursor is_active_in ISO PMID:9419374 SynGO PMID:9419374 RGD:1298943 NCBI chrNW_004624795:1,744,782...1,747,360
Ensembl chrNW_004624795:1,744,648...1,746,633 		JBrowse link
G Igf1 insulin like growth factor 1 is_active_in ISO (PMID:28683263) SynGO PMID:28683263 NCBI chrNW_004624750:5,881,065...5,954,799
Ensembl chrNW_004624750:5,881,091...5,952,300 		JBrowse link
G Pdyn prodynorphin is_active_in ISO PMID:7911809 SynGO PMID:7911809 RGD:13702229 NCBI chrNW_004624741:3,239,101...3,253,507
Ensembl chrNW_004624741:3,237,942...3,253,503 		JBrowse link
G Penk proenkephalin is_active_in ISO PMID:8847409 SynGO PMID:8847409 RGD:13702175 NCBI chrNW_004624886:3,595,485...3,613,117
Ensembl chrNW_004624886:3,595,450...3,613,593 		JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A located_in ISO (PMID:22366033) UniProt PMID:22366033 NCBI chrNW_004624811:4,639,926...4,902,749
Ensembl chrNW_004624811:4,640,090...4,901,510 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      endomembrane system 3883
        secretory granule 410
          secretory granule lumen 11
            acrosomal lumen 0
            azurophil granule lumen 0
            chromaffin granule lumen 2
            dense core granule lumen + 9
            platelet alpha granule lumen 0
            platelet dense granule lumen 0
            specific granule lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      organelle 13115
        membrane-bounded organelle 12016
          vesicle 1963
            intracellular vesicle 1794
              cytoplasmic vesicle 1786
                secretory vesicle 661
                  secretory granule 410
                    secretory granule lumen 11
                      acrosomal lumen 0
                      azurophil granule lumen 0
                      chromaffin granule lumen 2
                      dense core granule lumen + 9
                      platelet alpha granule lumen 0
                      platelet dense granule lumen 0
                      specific granule lumen 0
paths to the root