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ONTOLOGY REPORT - ANNOTATIONS

Term:secretory granule lumen
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Accession:GO:0034774 term browser browse the term
Definition:The volume enclosed by the membrane of a secretory granule.


show annotations for term's descendants           Sort by:
secretory granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:50,004,806...50,024,130
Ensembl chr 9:50,004,806...50,024,130 		JBrowse link
G GRP gastrin releasing peptide located_in ISS UniProt GO_REF:0000024 NCBI chr 1:16,974,818...16,987,578
Ensembl chr 1:16,975,113...16,987,531 		JBrowse link
G SERPINI1 serpin family I member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr34:32,553,876...32,624,708
Ensembl chr34:32,553,902...32,624,526 		JBrowse link
azurophil granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRSS57 serine protease 57 located_in ISO (PMID:23904161) UniProt PMID:23904161 NCBI chr20:57,873,891...57,877,890
Ensembl chr20:57,874,770...57,877,888 		JBrowse link
chromaffin granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase located_in IEA UniProt GO_REF:0000044 NCBI chr 9:50,004,806...50,024,130
Ensembl chr 9:50,004,806...50,024,130 		JBrowse link
G PENK proenkephalin located_in IEA UniProt GO_REF:0000044 NCBI chr29:7,757,543...7,763,137
Ensembl chr29:7,757,857...7,762,398 		JBrowse link
neuronal dense core vesicle lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCYAP1 adenylate cyclase activating polypeptide 1 is_active_in ISO PMID:9792613 SynGO PMID:9792613 RGD:2312463 NCBI chr 7:67,682,421...67,691,035 JBrowse link
G CCK cholecystokinin is_active_in ISO PMID:6084830 SynGO PMID:6084830 RGD:405650225 NCBI chr23:11,414,254...11,419,990
Ensembl chr23:11,414,249...11,454,198 		JBrowse link
G CRH corticotropin releasing hormone is_active_in ISO PMID:19003957 SynGO PMID:19003957 RGD:405650366 NCBI chr29:15,831,944...15,840,560
Ensembl chr29:15,831,944...15,834,384 		JBrowse link
G GHRL ghrelin and obestatin prepropeptide is_active_in
located_in		 ISO
IEA		 (PMID:12597862) SynGO
Ensembl		 PMID:12597862 GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510 		JBrowse link
G HCRT hypocretin neuropeptide precursor is_active_in ISO PMID:9419374 SynGO PMID:9419374 RGD:1298943 NCBI chr 9:20,729,616...20,732,074
Ensembl chr 9:20,730,779...20,732,028 		JBrowse link
G IGF1 insulin like growth factor 1 is_active_in ISO (PMID:28683263) SynGO PMID:28683263 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794 		JBrowse link
G PDYN prodynorphin is_active_in ISO PMID:7911809 SynGO PMID:7911809 RGD:13702229 NCBI chr24:19,043,955...19,057,413
Ensembl chr24:19,053,870...19,056,364 		JBrowse link
G PENK proenkephalin is_active_in ISO PMID:8847409 SynGO PMID:8847409 RGD:13702175 NCBI chr29:7,757,543...7,763,137
Ensembl chr29:7,757,857...7,762,398 		JBrowse link
G VPS13A vacuolar protein sorting 13 homolog A located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:81,191,125...81,426,337
Ensembl chr 1:81,192,349...81,426,322 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      endomembrane system 4138
        secretory granule 448
          secretory granule lumen 13
            acrosomal lumen 0
            azurophil granule lumen 1
            chromaffin granule lumen 2
            dense core granule lumen + 9
            platelet alpha granule lumen 0
            platelet dense granule lumen 0
            specific granule lumen 0
Path 2
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      organelle 17402
        membrane-bounded organelle 16136
          vesicle 2118
            intracellular vesicle 1933
              cytoplasmic vesicle 1924
                secretory vesicle 710
                  secretory granule 448
                    secretory granule lumen 13
                      acrosomal lumen 0
                      azurophil granule lumen 1
                      chromaffin granule lumen 2
                      dense core granule lumen + 9
                      platelet alpha granule lumen 0
                      platelet dense granule lumen 0
                      specific granule lumen 0
paths to the root