ONTOLOGY REPORT - ANNOTATIONS |
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Term: | nuclear periphery |
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Accession: | GO:0034399
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browse the term
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Definition: | The portion of the nuclear lumen proximal to the inner nuclear membrane. |
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Anapc4 |
anaphase promoting complex subunit 4 |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr14:58,125,995...58,159,253
Ensembl chr14:58,125,995...58,157,770
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Atf4 |
activating transcription factor 4 |
located_in |
ISO |
(PMID:23392669) |
RGD |
PMID:23392669 |
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NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
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Dag1 |
dystroglycan 1 |
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IDA |
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RGD |
PMID:21668890 |
RGD:12902619 |
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
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Ebna1bp2 |
EBNA1 binding protein 2 |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 5:132,148,164...132,152,730
Ensembl chr 5:132,148,143...132,153,267
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Lmnb1 |
lamin B1 |
located_in |
ISO |
(PMID:28811369) |
RGD |
PMID:28811369 |
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NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
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Lmnb2 |
lamin B2 |
located_in |
ISO |
(PMID:28811369) |
RGD |
PMID:28811369 |
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NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
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Map2 |
microtubule-associated protein 2 |
located_in |
ISO |
(PMID:11834298) |
RGD |
PMID:11834298 |
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NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
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Mapt |
microtubule-associated protein tau |
located_in |
ISO |
(PMID:19157893) |
RGD |
PMID:19157893 |
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NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
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Mnda |
myeloid cell nuclear differentiation antigen |
located_in |
ISO |
(PMID:19158679) |
RGD |
PMID:19158679 |
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NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201
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Msx1 |
msh homeobox 1 |
is_active_in |
ISO |
(PMID:16600910) |
RGD |
PMID:16600910 |
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NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
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Nup107 |
nucleoporin 107 |
located_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:15229283) |
Ensembl UniProt RGD |
PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370
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Nup153 |
nucleoporin 153 |
located_in |
ISS IEA IDA ISO |
GO_REF:0000024 GO_REF:0000107 PMID:11839768 (PMID:11839768), (PMID:15229283) |
UniProt Ensembl RGD |
PMID:11839768 PMID:15229283 PMID:11839768 |
GO_REF:0000024 GO_REF:0000107, RGD:8553300 |
NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876
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Nup205 |
nucleoporin 205 |
located_in |
ISO |
(PMID:15229283) |
RGD |
PMID:15229283 |
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NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844
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Nup93 |
nucleoporin 93 |
located_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:15229283) |
UniProt Ensembl RGD |
PMID:15229283 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026
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Nup98 |
nucleoporin 98 and 96 precursor |
located_in |
ISS IDA ISO |
GO_REF:0000024 PMID:11839768 (PMID:11839768), (PMID:15229283) |
UniProt RGD |
PMID:11839768 PMID:15229283 PMID:11839768 |
GO_REF:0000024, RGD:8553300 |
NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415
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Pias1 |
protein inhibitor of activated STAT, 1 |
located_in |
ISO |
(PMID:16600910) |
RGD |
PMID:16600910 |
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NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905
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Psip1 |
PC4 and SRSF1 interacting protein 1 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:11512661) |
UniProt RGD |
PMID:11512661 |
GO_REF:0000024 |
NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
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Sp100 |
SP100 nuclear antigen |
located_in |
ISO |
(PMID:11313457) |
RGD |
PMID:11313457 |
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NCBI chr 9:86,310,990...86,377,036
Ensembl chr 9:86,311,032...86,377,034
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Tpr |
translocated promoter region, nuclear basket protein |
located_in |
ISO IEA IDA |
(PMID:11514627), (PMID:11839768), (PMID:11952838), (PMID:15229283), (PMID:22401879), (PMID:9024684) (PMID:22401879) GO_REF:0000117 |
RGD UniProt |
PMID:9024684 PMID:11514627 PMID:11839768 PMID:11952838 PMID:15229283 PMID:22401879 PMID:11839768 More...
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GO_REF:0000117, RGD:8553300 |
NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496
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Eif6 |
eukaryotic translation initiation factor 6 |
located_in |
ISO |
(PMID:9374518) |
RGD |
PMID:9374518 |
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NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
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Lmna |
lamin A/C |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:8032679) |
Ensembl RGD |
PMID:8032679 |
GO_REF:0000107 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
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Lmnb1 |
lamin B1 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:8032679) |
Ensembl RGD |
PMID:8032679 |
GO_REF:0000107 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
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Lmnb2 |
lamin B2 |
located_in |
ISO |
(PMID:8032679) |
RGD |
PMID:8032679 |
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NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
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Lmntd2 |
lamin tail domain containing 2 |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156
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Narf |
nuclear prelamin A recognition factor |
located_in is_active_in |
ISO IBA IEA |
(PMID:10514485) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:10514485 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:106,519,508...106,537,494
Ensembl chr10:106,519,444...106,537,486
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Cask |
calcium/calmodulin dependent serine protein kinase |
located_in part_of |
ISO |
(PMID:18664494) |
RGD |
PMID:18664494 |
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NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
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Efcc1 |
EF-hand and coiled-coil domain containing 1 |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
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Hlcs |
holocarboxylase synthetase |
located_in |
ISO |
(PMID:14613969) |
RGD |
PMID:14613969 |
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NCBI chr11:33,455,806...33,635,197
Ensembl chr11:33,455,809...33,624,222
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Lbr |
lamin B receptor |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (PMID:27492478) |
Ensembl RGD |
PMID:27492478 |
GO_REF:0000107 |
NCBI chr13:93,539,386...93,564,026
Ensembl chr13:93,538,920...93,564,017
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Lmna |
lamin A/C |
located_in is_active_in |
IEA ISO IBA ISS |
GO_REF:0000044 (PMID:28241138), (PMID:31576060) GO_REF:0000033 (PMID:2188730), (PMID:2344612), (PMID:24741066), (PMID:37788673), (PMID:37832547) GO_REF:0000024 |
UniProt RGD GO_Central |
PMID:2188730 PMID:2344612 PMID:24741066 PMID:28241138 PMID:31576060 PMID:37788673 PMID:37832547 More...
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GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
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Lmnb1 |
lamin B1 |
is_active_in located_in |
IDA ISO IBA IEA |
(PMID:28241138) GO_REF:0000033 GO_REF:0000117 (PMID:32910914) |
RGD GO_Central UniProt |
PMID:28241138 PMID:32910914 PMID:16950509 |
GO_REF:0000033 GO_REF:0000117, RGD:10044252 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
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Lmnb2 |
lamin B2 |
is_active_in |
IBA ISO |
GO_REF:0000033 (PMID:28241138) |
GO_Central RGD |
PMID:28241138 |
GO_REF:0000033 |
NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
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Nup35 |
nucleoporin 35 |
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IDA |
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RGD |
PMID:15703211 |
RGD:7327145 |
NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130
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Pcna |
proliferating cell nuclear antigen |
located_in |
ISO |
(PMID:10888872) |
RGD |
PMID:10888872 |
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NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
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Rnf220 |
ring finger protein 220 |
located_in |
ISO |
(PMID:33964137) |
RGD |
PMID:33964137 |
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NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418
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Stx1b |
syntaxin 1B |
located_in |
ISO |
(PMID:18691641) |
RGD |
PMID:18691641 |
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NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
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Ahctf1 |
AT hook containing transcription factor 1 |
located_in |
ISO |
(PMID:11952839) |
RGD |
PMID:11952839 |
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NCBI chr13:91,481,936...91,536,391
Ensembl chr13:91,481,936...91,536,391
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Akap8 |
A-kinase anchoring protein 8 |
located_in is_active_in |
IDA IEA ISO IBA |
GO_REF:0000044 (PMID:16751186) GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:16751186 PMID:8125992 |
GO_REF:0000033 GO_REF:0000044, RGD:724798 |
NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399
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Akap8l |
A-kinase anchoring protein 8 like |
located_in is_active_in |
ISO IBA |
(PMID:11034899), (PMID:16391387) (PMID:16391387) GO_REF:0000033 |
RGD GO_Central |
PMID:11034899 PMID:16391387 |
GO_REF:0000033 |
NCBI chr 7:11,332,671...11,362,287
Ensembl chr 7:11,332,672...11,362,275
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Alox5 |
arachidonate 5-lipoxygenase |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:19233132) |
Ensembl RGD |
PMID:19233132 |
GO_REF:0000107 |
NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
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Anp32a |
acidic nuclear phosphoprotein 32 family member A |
located_in |
ISO |
UniProtKB:P54253 (PMID:9353121) |
RGD |
PMID:9353121 |
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NCBI chr 8:62,829,099...62,865,443
Ensembl chr 8:62,827,456...62,865,443
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Ar |
androgen receptor |
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IDA |
MMO:0000679 |
RGD |
PMID:6466649 |
RGD:407431646 |
NCBI chr X:63,104,771...63,273,934
Ensembl chr X:63,104,771...63,273,925
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Arfgef1 |
ADP ribosylation factor guanine nucleotide exchange factor 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 5:8,982,061...9,076,326
Ensembl chr 5:8,981,540...9,076,326
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Atn1 |
atrophin 1 |
located_in |
ISO IEA |
(PMID:10973986) GO_REF:0000107 |
RGD Ensembl |
PMID:10973986 |
GO_REF:0000107 |
NCBI chr 4:157,554,287...157,568,092
Ensembl chr 4:157,551,276...157,568,132
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Atxn1 |
ataxin 1 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:17557114), (PMID:9353120) |
UniProt RGD |
PMID:9353120 PMID:17557114 |
GO_REF:0000024 |
NCBI chr17:18,737,491...19,142,360
Ensembl chr17:18,737,533...19,142,360
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Atxn3 |
ataxin 3 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902
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Basp1 |
brain abundant, membrane attached signal protein 1 |
located_in |
ISO IEA |
(PMID:19050011) GO_REF:0000107 |
RGD Ensembl |
PMID:19050011 |
GO_REF:0000107 |
NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043
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Bckdk |
branched chain ketoacid dehydrogenase kinase |
located_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
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Blm |
BLM RecQ like helicase |
located_in |
ISO |
(PMID:11309417) |
RGD |
PMID:11309417 |
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NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
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Cad |
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase |
located_in |
ISO |
(PMID:9525610) |
RGD |
PMID:9525610 |
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NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861
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Cask |
calcium/calmodulin dependent serine protein kinase |
located_in |
ISO |
(PMID:18664494) |
RGD |
PMID:18664494 |
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NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
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Cebpa |
CCAAT/enhancer binding protein alpha |
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IDA |
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RGD |
PMID:16172914 |
RGD:1625368 |
NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
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Cebpb |
CCAAT/enhancer binding protein beta |
located_in |
IDA ISO IEA |
(PMID:21122806) GO_REF:0000107 |
RGD Ensembl |
PMID:21122806 PMID:14661739 PMID:12095231 |
GO_REF:0000107, RGD:2303385, RGD:2303386 |
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
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Cenpf |
centromere protein F |
located_in |
ISO |
(PMID:7542657) |
RGD |
PMID:7542657 |
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NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669
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Cenpw |
centromere protein W |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 1:27,525,324...27,530,464
Ensembl chr 1:27,525,324...27,530,464
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Cfl1 |
cofilin 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
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Cfl1l1 |
cofilin 1 like 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 8:108,489,949...108,491,597
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Cfl2 |
cofilin 2 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 6:72,355,664...72,359,709
Ensembl chr 6:72,355,664...72,359,674
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Chmp1a |
charged multivesicular body protein 1A |
located_in |
ISO |
(PMID:11559747) |
RGD |
PMID:11559747 |
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NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
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Clic4 |
chloride intracellular channel 4 |
located_in |
ISO |
(PMID:14569596) |
RGD |
PMID:14569596 |
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NCBI chr 5:147,453,702...147,513,455
Ensembl chr 5:147,453,712...147,513,452
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Csnk2b |
casein kinase 2 beta |
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IDA |
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RGD |
PMID:9548568 |
RGD:11565140 |
NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133
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Cxxc1 |
CXXC finger protein 1 |
located_in |
ISO |
(PMID:12200428) |
RGD |
PMID:12200428 |
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NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551
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Da2-19 |
uncharacterized LOC302729 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr X:44,820,693...44,837,935
Ensembl chr X:44,820,820...44,837,934
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Dcaf7 |
DDB1 and CUL4 associated factor 7 |
located_in |
ISO |
(PMID:21328542) |
RGD |
PMID:21328542 |
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NCBI chr10:90,974,095...90,996,275
Ensembl chr10:90,974,095...90,996,275
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Ddx39b |
DExD-box helicase 39B |
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IDA |
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RGD |
PMID:1618789 |
RGD:632224 |
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Dgkq |
diacylglycerol kinase, theta |
located_in |
IMP |
PMID:15337525 |
ParkinsonsUK-UCL |
PMID:15337525 |
RGD:11567257 |
NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131
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Dnmt3a |
DNA methyltransferase 3 alpha |
located_in |
ISS ISO |
PMID:12138111 (PMID:12138111) |
RGD |
PMID:12138111 PMID:12138111 |
RGD:8554662 |
NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
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Dntt |
DNA nucleotidylexotransferase |
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IDA |
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RGD |
PMID:3272344 |
RGD:8694147 |
NCBI chr 1:239,856,391...239,888,283
Ensembl chr 1:239,856,391...239,888,282
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Enc1 |
ectodermal-neural cortex 1 |
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IDA |
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RGD |
PMID:9566959 |
RGD:7775032 |
NCBI chr 2:28,550,670...28,562,591
Ensembl chr 2:28,550,464...28,562,713
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G |
ENSRNOG00000066376 |
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located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
Ensembl chr 9:78,433,146...78,434,143
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G |
ENSRNOG00000070567 |
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located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
Ensembl chr 1:187,296,520...187,297,219
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G |
Ercc8 |
ERCC excision repair 8, CSA ubiquitin ligase complex subunit |
located_in |
ISO |
(PMID:11782547), (PMID:26620705) |
RGD |
PMID:11782547 PMID:26620705 |
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NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859
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G |
Fign |
fidgetin, microtubule severing factor |
located_in |
ISO |
(PMID:16751186) |
RGD |
PMID:16751186 |
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NCBI chr 3:48,637,510...48,760,772
Ensembl chr 3:48,642,496...48,760,787
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G |
Fos |
Fos proto-oncogene, AP-1 transcription factor subunit |
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IDA |
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RGD |
PMID:20053986 |
RGD:405650597 |
NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
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G |
Gfi1 |
growth factor independent 1 transcriptional repressor |
located_in |
ISO IEA |
(PMID:12874834) GO_REF:0000107 |
RGD Ensembl |
PMID:12874834 |
GO_REF:0000107 |
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
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G |
Gfi1b |
growth factor independent 1B transcriptional repressor |
located_in |
ISO |
(PMID:12874834) |
RGD |
PMID:12874834 |
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NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942
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G |
Ghrhr |
growth hormone releasing hormone receptor |
located_in |
ISO IEA |
(PMID:10461027) GO_REF:0000107 |
RGD Ensembl |
PMID:10461027 |
GO_REF:0000107 |
NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776
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G |
Gmcl1 |
germ cell-less 1, spermatogenesis associated |
located_in |
ISO |
(PMID:11591818) |
RGD |
PMID:11591818 |
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NCBI chr 4:119,140,598...119,179,891
Ensembl chr 4:119,140,598...119,179,881
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G |
Hat1 |
histone acetyltransferase 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
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G |
Hes1 |
hes family bHLH transcription factor 1 |
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IDA |
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RGD |
PMID:11035023 |
RGD:9685356 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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G |
Hlcs |
holocarboxylase synthetase |
located_in |
ISO |
(PMID:14613969) |
RGD |
PMID:14613969 |
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NCBI chr11:33,455,806...33,635,197
Ensembl chr11:33,455,809...33,624,222
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G |
Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
located_in |
IDA |
PMID:23184978 |
BHF-UCL |
PMID:23184978 |
RGD:11567256 |
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
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G |
Hnrnpm |
heterogeneous nuclear ribonucleoprotein M |
located_in |
ISO |
(PMID:19874820) |
RGD |
PMID:19874820 |
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NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
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G |
Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
located_in |
ISO IEA |
(PMID:14608463), (PMID:8174554) GO_REF:0000107 |
RGD Ensembl |
PMID:8174554 PMID:14608463 |
GO_REF:0000107 |
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
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G |
Iffo1 |
intermediate filament family orphan 1 |
located_in |
ISO |
(PMID:31548606) |
RGD |
PMID:31548606 |
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NCBI chr 4:157,945,075...157,962,302
Ensembl chr 4:157,945,107...157,962,302
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G |
Kat8 |
lysine acetyltransferase 8 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:21746928) |
Ensembl RGD |
PMID:21746928 |
GO_REF:0000107 |
NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
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G |
Kin |
Kin17 DNA and RNA binding protein |
located_in |
ISO |
(PMID:12754299) |
RGD |
PMID:12754299 |
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NCBI chr17:68,413,483...68,431,392
Ensembl chr17:68,413,486...68,423,845
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G |
Krt18 |
keratin 18 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 7:133,157,486...133,161,162
Ensembl chr 7:133,157,475...133,161,166
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G |
Krt8 |
keratin 8 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728
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G |
Lmna |
lamin A/C |
located_in |
IDA IEA ISO |
GO_REF:0000044 (PMID:31548606) |
UniProt RGD |
PMID:31548606 PMID:12243746 |
GO_REF:0000044, RGD:1598684 |
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
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G |
Lmnb1 |
lamin B1 |
located_in |
IDA ISO IEA |
(PMID:20153721) GO_REF:0000107 |
RGD Ensembl |
PMID:20153721 PMID:12243746 |
GO_REF:0000107, RGD:1598684 |
NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
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G |
LOC102555366 |
cofilin-1-like |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr10:54,673,122...54,675,094
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G |
Lrif1 |
ligand dependent nuclear receptor interacting factor 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483
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G |
Maea |
macrophage erythroblast attacher, E3 ubiquitin ligase |
located_in |
ISO IEA |
(PMID:16510120) GO_REF:0000044 |
RGD UniProt |
PMID:16510120 |
GO_REF:0000044 |
NCBI chr14:77,357,261...77,390,683
Ensembl chr14:77,357,264...77,390,671
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G |
Mat1a |
methionine adenosyltransferase 1A |
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IDA |
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RGD |
PMID:19497982 |
RGD:7242770 |
NCBI chr16:16,983,084...17,001,284
Ensembl chr16:16,983,022...17,001,274
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G |
Matr3 |
matrin 3 |
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IDA |
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RGD |
PMID:2033075 |
RGD:69882 |
NCBI chr18:27,154,098...27,193,212
Ensembl chr18:27,163,714...27,193,166
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G |
Mbd1 |
methyl-CpG binding domain protein 1 |
located_in |
ISO |
(PMID:15777793) |
RGD |
PMID:15777793 |
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NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
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G |
Men1 |
menin 1 |
located_in |
ISO IEA |
(PMID:12874027) GO_REF:0000107 |
RGD Ensembl |
PMID:12874027 |
GO_REF:0000107 |
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
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G |
Morc2 |
MORC family CW-type zinc finger 2 |
located_in |
ISO |
(PMID:23260667) |
RGD |
PMID:23260667 |
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NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343
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G |
Ncor2 |
nuclear receptor co-repressor 2 |
located_in |
ISO |
(PMID:21328542) |
RGD |
PMID:21328542 |
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NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
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G |
Nono |
non-POU domain containing, octamer-binding |
located_in |
ISO |
(PMID:19874820) |
RGD |
PMID:19874820 |
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NCBI chr X:66,554,131...66,571,992
Ensembl chr X:66,554,098...66,571,952
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G |
Npm1 |
nucleophosmin 1 |
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IDA |
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RGD |
PMID:20387789 |
RGD:11534991 |
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
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G |
Nsmf |
NMDA receptor synaptonuclear signaling and neuronal migration factor |
located_in |
IDA |
PMID:18303947 |
UniProt |
PMID:18303947 |
RGD:8553324 |
NCBI chr 3:7,861,846...7,870,615
Ensembl chr 3:7,861,872...7,870,614
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G |
Nufip1 |
nuclear FMR1 interacting protein 1 |
located_in |
ISO |
(PMID:12941608) |
RGD |
PMID:12941608 |
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NCBI chr15:51,429,518...51,460,308
Ensembl chr15:51,429,549...51,460,310
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G |
Numa1 |
nuclear mitotic apparatus protein 1 |
located_in |
IDA ISO |
(PMID:11092755) (PMID:11956313), (PMID:7962183) |
RGD |
PMID:7962183 PMID:11092755 PMID:11956313 PMID:12243746 |
RGD:1598684 |
NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
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G |
Ogg1 |
8-oxoguanine DNA glycosylase |
located_in |
ISO ISS |
(PMID:17148573) GO_REF:0000024 |
RGD UniProt |
PMID:17148573 |
GO_REF:0000024 |
NCBI chr 4:146,474,701...146,481,959
Ensembl chr 4:146,474,750...146,484,766
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G |
Phactr3 |
phosphatase and actin regulator 3 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 3:165,205,247...165,423,692
Ensembl chr 3:165,205,255...165,423,153
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G |
Phb2 |
prohibitin 2 |
located_in |
ISO IEA ISS |
(PMID:21328542) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:21328542 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
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G |
Phf5a |
PHD finger protein 5A |
located_in |
ISO |
(PMID:12054543) |
RGD |
PMID:12054543 |
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NCBI chr 7:113,378,469...113,385,035
Ensembl chr 7:113,378,471...113,385,460
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G |
Pias4 |
protein inhibitor of activated STAT, 4 |
located_in |
ISO |
(PMID:11731474) |
RGD |
PMID:11731474 |
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NCBI chr 7:8,546,312...8,559,838
Ensembl chr 7:8,546,312...8,559,808
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G |
Pml |
PML nuclear body scaffold |
located_in |
ISO |
(PMID:11080164) (PMID:15252119) |
RGD |
PMID:11080164 PMID:15252119 |
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NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
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G |
Pola1 |
DNA polymerase alpha 1, catalytic subunit |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:1903085) |
UniProt RGD |
PMID:1903085 |
GO_REF:0000024 |
NCBI chr X:58,034,617...58,348,612
Ensembl chr X:58,034,619...58,348,536
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G |
Ppig |
peptidylprolyl isomerase G |
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IDA |
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RGD |
PMID:9525923 |
RGD:633708 |
NCBI chr 3:54,484,023...54,512,929
Ensembl chr 3:54,484,023...54,512,926
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G |
Prkcd |
protein kinase C, delta |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:10882525) |
Ensembl RGD |
PMID:10882525 |
GO_REF:0000107 |
NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352
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G |
Prkcz |
protein kinase C, zeta |
located_in |
ISO |
(PMID:10882525) |
RGD |
PMID:10882525 |
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NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
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G |
Prpf40a |
pre-mRNA processing factor 40 homolog A |
located_in |
ISO |
(PMID:16391387) |
RGD |
PMID:16391387 |
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NCBI chr 3:37,625,585...37,689,859
Ensembl chr 3:37,627,690...37,690,886
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G |
Psma6 |
proteasome 20S subunit alpha 6 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:10852819) |
BHF-UCL RGD |
PMID:10852819 |
GO_REF:0000024 |
NCBI chr 6:72,765,534...72,796,554
Ensembl chr 6:72,765,473...72,796,554
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G |
Pspc1 |
paraspeckle component 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr15:30,828,617...30,911,315
Ensembl chr15:30,828,626...30,911,202
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G |
Rad21 |
RAD21 cohesin complex component |
located_in |
ISO |
(PMID:11590136) |
RGD |
PMID:11590136 |
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NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817
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G |
Rnasel |
ribonuclease L |
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IDA |
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RGD |
PMID:8469023 |
RGD:2291995 |
NCBI chr13:65,894,990...65,910,354
Ensembl chr13:65,901,459...65,908,704
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G |
Runx1t1 |
RUNX1 partner transcriptional co-repressor 1 |
located_in |
ISO |
(PMID:10973986) |
RGD |
PMID:10973986 |
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NCBI chr 5:27,187,674...27,338,070
Ensembl chr 5:27,187,551...27,335,592
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G |
Ruvbl1 |
RuvB-like AAA ATPase 1 |
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IDA |
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RGD |
PMID:10050036 |
RGD:68302 |
NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
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G |
Satb1 |
SATB homeobox 1 |
located_in |
ISO |
(PMID:15851481) |
RGD |
PMID:15851481 |
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NCBI chr 9:4,677,817...4,773,061
Ensembl chr 9:4,680,920...4,753,251
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G |
Scaf8 |
SR-related CTD-associated factor 8 |
located_in |
IDA |
PMID:9528809 |
UniProt |
PMID:9528809 |
RGD:8554489 |
NCBI chr 1:43,727,686...43,855,889
Ensembl chr 1:43,727,794...43,804,977
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G |
Sf3b1 |
splicing factor 3b, subunit 1 |
located_in |
ISO |
(PMID:20153721) |
RGD |
PMID:20153721 |
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NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
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G |
Sfpq |
splicing factor proline and glutamine rich |
located_in |
ISO |
(PMID:19874820) |
RGD |
PMID:19874820 |
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NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
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G |
Smc1a |
structural maintenance of chromosomes 1A |
located_in |
ISO IEA |
(PMID:11590136) GO_REF:0000107 |
RGD Ensembl |
PMID:11590136 |
GO_REF:0000107 |
NCBI chr X:21,103,323...21,148,053
Ensembl chr X:21,103,282...21,148,056
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G |
Smc3 |
structural maintenance of chromosomes 3 |
located_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:11590136) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11590136 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522
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G |
Snw1 |
SNW domain containing 1 |
located_in |
ISO |
(PMID:12840015) |
RGD |
PMID:12840015 |
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NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
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G |
Sorbs1 |
sorbin and SH3 domain containing 1 |
located_in |
ISO |
(PMID:15777793) |
RGD |
PMID:15777793 |
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NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:239,108,777...239,330,169
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G |
Sparc |
secreted protein acidic and cysteine rich |
located_in |
ISO IEA |
(PMID:15389586) GO_REF:0000107 |
RGD Ensembl |
PMID:15389586 |
GO_REF:0000107 |
NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
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G |
Sptbn2 |
spectrin, beta, non-erythrocytic 2 |
located_in |
TAS |
PMID:9704016 |
UniProt |
PMID:9704016 |
RGD:70020 |
NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
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G |
Sptbn4 |
spectrin, beta, non-erythrocytic 4 |
located_in |
ISO |
(PMID:11294830) |
RGD |
PMID:11294830 |
|
NCBI chr 1:82,650,750...82,738,345
Ensembl chr 1:82,650,751...82,737,228
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G |
Stag1 |
STAG1 cohesin complex component |
located_in |
ISO |
(PMID:11590136) |
RGD |
PMID:11590136 |
|
NCBI chr 8:101,179,039...101,564,684
Ensembl chr 8:101,179,039...101,564,677
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G |
Stag2 |
STAG2 cohesin complex component |
located_in |
ISO |
(PMID:11590136) |
RGD |
PMID:11590136 |
|
NCBI chr X:120,974,687...121,105,677
Ensembl chr X:120,974,857...121,105,677
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G |
Tep1 |
telomerase associated protein 1 |
located_in |
ISO IEA |
(PMID:7876352) GO_REF:0000107 |
RGD Ensembl |
PMID:7876352 |
GO_REF:0000107 |
NCBI chr15:24,045,876...24,093,526
Ensembl chr15:24,045,878...24,093,526
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G |
Tgfb1i1 |
transforming growth factor beta 1 induced transcript 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
|
GO_REF:0000044 |
NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
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G |
Tp53 |
tumor protein p53 |
located_in |
ISO IEA |
(PMID:11080164) GO_REF:0000107 |
RGD Ensembl |
PMID:11080164 |
GO_REF:0000107 |
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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G |
Uhrf1 |
ubiquitin-like with PHD and ring finger domains 1 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:14993289) |
Ensembl RGD |
PMID:14993289 |
GO_REF:0000107 |
NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
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G |
Vdr |
vitamin D receptor |
|
IDA |
|
RGD |
PMID:9744521 |
RGD:8158090 |
NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
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G |
Vim |
vimentin |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
|
GO_REF:0000044 |
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
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G |
Xpot |
exportin for tRNA |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:57,111,536...57,152,013
Ensembl chr 7:57,111,536...57,152,099
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G |
Yy1 |
YY1 transcription factor |
|
IDA |
|
RGD |
PMID:9215534 |
RGD:9588269 |
NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
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G |
Zfp326 |
zinc finger protein 326 |
located_in |
ISO |
(PMID:9809746) |
RGD |
PMID:9809746 |
|
NCBI chr14:3,941,210...3,980,419
Ensembl chr14:3,941,958...3,980,384
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G |
Zfp703 |
zinc finger protein 703 |
located_in |
ISO |
(PMID:21328542) |
RGD |
PMID:21328542 |
|
NCBI chr16:65,076,507...65,080,677
Ensembl chr16:65,076,507...65,080,677
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Term paths to the root
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