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ONTOLOGY REPORT - ANNOTATIONS

Term:lipid droplet organization
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Accession:GO:0034389 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.
Synonyms:exact_synonym: adiposome organization;   lipid body organization;   lipid particle organisation;   lipid particle organization
 related_synonym: lipid particle organization and biogenesis
 xref: Reactome:R-HSA-8964572 "Lipid particle organization"


show annotations for term's descendants           Sort by:
lipid droplet organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISO
IEA
ISS		 (PMID:24039768)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24039768 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:117,118,035...117,121,063
Ensembl chr 4:115,560,261...115,563,346 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA
ISS		 (PMID:19278620)
GO_REF:0000107
MGI:5014325 (PMID:24778225)
MGI:5014325 (PMID:27806294)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:19278620 PMID:24778225 PMID:27806294 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:215,160,764...215,172,540
Ensembl chr 1:205,733,872...205,743,421 		JBrowse link
G Cidec cell death-inducing DFFA-like effector c involved_in ISO
IEA		 (PMID:20049731)
GO_REF:0000107		 RGD
Ensembl		 PMID:20049731 GO_REF:0000107 NCBI chr 4:148,124,924...148,137,806
Ensembl chr 4:146,569,289...146,582,173 		JBrowse link
G Ddhd2 DDHD domain containing 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:5662251 (PMID:25267624)
GO_REF:0000107		 RGD
Ensembl		 PMID:25267624 GO_REF:0000107 NCBI chr16:73,022,136...73,051,746
Ensembl chr16:66,319,466...66,349,023 		JBrowse link
G Faf2 Fas associated factor family member 2 acts_upstream_of_or_within ISO
IEA		 (PMID:23297223)
GO_REF:0000107		 RGD
Ensembl		 PMID:23297223 GO_REF:0000107 NCBI chr17:9,952,329...9,994,596
Ensembl chr17:9,947,220...9,989,485 		JBrowse link
G Fitm1 fat storage-inducing transmembrane protein 1 involved_in IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:18160536)		 GO_Central
Ensembl
InterPro
RGD		 PMID:18160536 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr15:33,034,705...33,035,974
Ensembl chr15:29,064,707...29,066,015 		JBrowse link
G Fitm2 fat storage-inducing transmembrane protein 2 involved_in ISS
IEA
ISO
IBA		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:18160536), (PMID:20520733)
GO_REF:0000033		 UniProt
Ensembl
InterPro
RGD
GO_Central		 PMID:18160536 PMID:20520733 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:152,141,346...152,147,858
Ensembl chr 3:152,141,346...152,147,858 		JBrowse link
G Plin5 perilipin 5 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22532565)		 UniProt
Ensembl
RGD		 PMID:22532565 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:939,745...946,188
Ensembl chr 9:939,747...946,120 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 acts_upstream_of_or_within ISO
IEA		 (PMID:23297223)
GO_REF:0000107		 RGD
Ensembl		 PMID:23297223 GO_REF:0000107 NCBI chr 1:205,982,279...205,987,361
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 involved_in ISO
IEA		 (PMID:23398201)
GO_REF:0000107		 RGD
Ensembl		 PMID:23398201 GO_REF:0000107 NCBI chr 7:117,173,485...117,194,065
Ensembl chr 7:115,293,538...115,314,077 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:21711559) RGD PMID:21711559 NCBI chr14:85,491,223...85,496,884
Ensembl chr14:81,275,091...81,299,601 		JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISS
ISO		 GO_REF:0000024
(PMID:21711559)		 UniProt
RGD		 PMID:21711559 GO_REF:0000024 NCBI chr 2:167,025,985...167,037,998
Ensembl chr 2:164,727,779...164,740,221 		JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor acts_upstream_of_or_within ISO
IEA		 (PMID:9643346)
GO_REF:0000107		 RGD
Ensembl		 PMID:9643346 GO_REF:0000107 NCBI chr 2:191,158,166...191,233,432
Ensembl chr 2:188,469,521...188,544,795 		JBrowse link
G Rab18 RAB18, member RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:24239381)
GO_REF:0000033		 RGD
GO_Central		 PMID:24239381 GO_REF:0000033 NCBI chr17:59,639,264...59,670,653
Ensembl chr17:54,943,955...54,976,043 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24239381)		 ParkinsonsUK-UCL
Ensembl
RGD		 PMID:24239381 GO_REF:0000024 GO_REF:0000107 NCBI chr13:41,908,179...41,981,611
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Spart spartin acts_upstream_of_or_within ISO
IEA		 MGI:5430946 (PMID:22619377)
GO_REF:0000107		 RGD
Ensembl		 PMID:22619377 GO_REF:0000107 NCBI chr 2:141,442,770...141,469,388
Ensembl chr 2:139,292,355...139,319,248 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 acts_upstream_of_or_within ISO
IEA		 MGI:1856684 (PMID:24239381)
GO_REF:0000107		 RGD
Ensembl		 PMID:24239381 GO_REF:0000107 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
G Tspo2 translocator protein 2 involved_in ISO
IEA		 (PMID:32358067)
GO_REF:0000107		 RGD
Ensembl		 PMID:32358067 GO_REF:0000107 NCBI chr 9:12,544,615...12,548,563
Ensembl chr 9:12,545,015...12,548,573 		JBrowse link
lipid droplet disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha acts_upstream_of_positive_effect ISS
ISO		 GO_REF:0000024
(PMID:34077757)		 UniProt
RGD		 PMID:34077757 GO_REF:0000024 NCBI chr 1:210,506,069...210,554,753
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Kat5 lysine acetyltransferase 5 acts_upstream_of_positive_effect ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34077757)		 UniProt
Ensembl
RGD		 PMID:34077757 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:212,325,089...212,332,640
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Plin2 perilipin 2 involved_in ISO
IEA		 (PMID:34077757)
GO_REF:0000107		 RGD
Ensembl		 PMID:34077757 GO_REF:0000107 NCBI chr 5:106,202,634...106,258,748
Ensembl chr 5:101,154,411...101,242,319 		JBrowse link
G Plin3 perilipin 3 involved_in ISO (PMID:34077757) RGD PMID:34077757 NCBI chr 9:1,111,178...1,123,057
Ensembl chr 9:1,102,366...1,123,147 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 involved_in ISO
IEA		 (PMID:16239926)
GO_REF:0000107		 RGD
Ensembl		 PMID:16239926 GO_REF:0000107 NCBI chr 1:205,982,279...205,987,361
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_positive_effect ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34077757)		 UniProt
Ensembl
RGD		 PMID:34077757 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:55,967,766...56,003,450
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 acts_upstream_of_positive_effect ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34077757)		 UniProt
Ensembl
RGD		 PMID:34077757 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:125,036,945...125,109,010
Ensembl chr 5:119,813,226...119,879,543 		JBrowse link
lipid droplet formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21857022)		 UniProt
Ensembl
RGD		 PMID:21857022 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:117,118,035...117,121,063
Ensembl chr 4:115,560,261...115,563,346 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23458123)
GO_REF:0000117
(PMID:27564575), (PMID:27879284), (PMID:31178403), (PMID:31708432)		 UniProt
Ensembl
RGD		 PMID:23458123 PMID:27564575 PMID:27879284 PMID:31178403 PMID:31708432 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:215,160,764...215,172,540
Ensembl chr 1:205,733,872...205,743,421 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO
IEA
ISS		 (PMID:26946540), (PMID:31548309)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26946540 PMID:31548309 GO_REF:0000024 GO_REF:0000107 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681 		JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:26946540)
GO_REF:0000107
(PMID:26946540), (PMID:31548309)		 UniProt
RGD
Ensembl		 PMID:26946540 PMID:31548309 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:139,967,870...140,006,459
Ensembl chr 3:119,515,000...119,553,541 		JBrowse link
G Fitm1 fat storage-inducing transmembrane protein 1 involved_in ISO
IEA		 (PMID:22106267)
GO_REF:0000104
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:22106267 GO_REF:0000104 GO_REF:0000107 NCBI chr15:33,034,705...33,035,974
Ensembl chr15:29,064,707...29,066,015 		JBrowse link
G Fitm2 fat storage-inducing transmembrane protein 2 involved_in ISO
IEA		 (PMID:32915949)
GO_REF:0000107
(PMID:22106267), (PMID:26504167)		 RGD
Ensembl		 PMID:22106267 PMID:26504167 PMID:32915949 GO_REF:0000107 NCBI chr 3:152,141,346...152,147,858
Ensembl chr 3:152,141,346...152,147,858 		JBrowse link
G Ldaf1 lipid droplet assembly factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31708432)		 UniProt
Ensembl
RGD		 PMID:31708432 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:174,484,438...174,503,037
Ensembl chr 1:174,484,447...174,503,036 		JBrowse link
G Mospd2 motile sperm domain containing 2 involved_in ISO
IEA		 (PMID:35389430)
GO_REF:0000107		 RGD
Ensembl		 PMID:35389430 GO_REF:0000107 NCBI chr  X:33,052,063...33,105,550
Ensembl chr  X:29,420,586...29,462,398 		JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO
IEA		 MGI:4451714 (PMID:31086253)
GO_REF:0000107		 RGD
Ensembl		 PMID:31086253 GO_REF:0000107 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730 		JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO
IEA
ISS		 (PMID:33593792)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:33593792 GO_REF:0000024 GO_REF:0000107 NCBI chr14:82,166,401...82,215,479
Ensembl chr14:77,941,948...77,991,003 		JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO
IEA		 (PMID:28336330)
GO_REF:0000107		 RGD
Ensembl		 PMID:28336330 GO_REF:0000107 NCBI chr 1:83,315,017...83,411,342
Ensembl chr 1:74,236,211...74,274,656 		JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:30705059) RGD PMID:30705059 NCBI chr10:105,154,873...105,254,148
Ensembl chr10:104,656,883...104,757,918 		JBrowse link
G Smim22 small integral membrane protein 22 involved_in ISO (PMID:29765154) RGD PMID:29765154 NCBI chr10:10,572,146...10,574,339 JBrowse link
G Sqle squalene epoxidase involved_in ISO
IEA
ISS		 (PMID:29765154)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:29765154 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:92,758,175...92,773,049
Ensembl chr 7:90,868,011...90,883,618 		JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO
IEA
IBA		 (PMID:30970241)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:30970241 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039 		JBrowse link
lipid droplet fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cidea cell death-inducing DFFA-like effector a involved_in ISO (PMID:19843876)
(PMID:22144693), (PMID:26609809), (PMID:26733203), (PMID:36477540)		 RGD PMID:19843876 PMID:22144693 PMID:26609809 PMID:26733203 PMID:36477540 NCBI chr18:63,164,817...63,190,384
Ensembl chr18:60,894,874...60,920,481 		JBrowse link
G Cideb cell death-inducing DFFA-like effector b involved_in ISO
IEA		 (PMID:35939579)
GO_REF:0000107
(PMID:17646209), (PMID:19187774), (PMID:26733203)		 RGD
Ensembl		 PMID:17646209 PMID:19187774 PMID:26733203 PMID:35939579 GO_REF:0000107 NCBI chr15:33,222,135...33,226,407
Ensembl chr15:29,252,213...29,256,605 		JBrowse link
G Cidec cell death-inducing DFFA-like effector c involved_in ISO
IEA
ISS		 (PMID:23399566), (PMID:30361435)
(PMID:22144693), (PMID:23481402), (PMID:26733203), (PMID:30361435), (PMID:34508658), (PMID:36477540)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22144693 PMID:23399566 PMID:23481402 PMID:26733203 PMID:30361435 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 4:148,124,924...148,137,806
Ensembl chr 4:146,569,289...146,582,173 		JBrowse link
G Ldah lipid droplet associated hydrolase acts_upstream_of_positive_effect
involved_in		 ISO
IEA
ISS		 (PMID:28578400)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28578400 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:31,082,045...31,166,625
Ensembl chr 6:31,082,055...31,166,618 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 acts_upstream_of_negative_effect ISO
IEA
ISS		 (PMID:28578400)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28578400 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:205,982,279...205,987,361
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
negative regulation of lipid droplet fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36477540)		 UniProt
RGD		 PMID:36477540 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:157,331,494...157,364,769 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      cellular component organization or biogenesis 7104
        cellular component organization 6817
          organelle organization 3713
            lipid droplet organization 39
              lipid droplet disassembly 7
              lipid droplet formation 15
              lipid droplet fusion + 6
paths to the root