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ONTOLOGY REPORT - ANNOTATIONS

Term:cell junction organization
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Accession:GO:0034330 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.
Synonyms:exact_synonym: cell junction assembly and maintenance;   cell junction organisation
 related_synonym: cell junction biogenesis


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adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,084,275...4,090,383
Ensembl chr 3:4,082,216...4,090,356 		JBrowse link
G CTNNB1 catenin beta 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DSG3 desmoglein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,352,005...115,383,750
Ensembl chr 6:115,351,925...115,383,743 		JBrowse link
G FER FER tyrosine kinase ISO RGD PMID:12700184 RGD:2291909 NCBI chr 2:113,774,120...114,207,307
Ensembl chr 2:113,774,412...114,206,930 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G JAM3 junctional adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,629,245...60,738,979
Ensembl chr 9:60,613,400...60,738,924 		JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,276,122...133,383,506
Ensembl chr13:133,273,112...133,389,458 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,092,204...20,094,426
Ensembl chr12:20,092,196...20,094,469 		JBrowse link
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:98,512,800...98,543,924
Ensembl chr 1:98,514,267...98,542,382 		JBrowse link
G TBCD tubulin folding cofactor D involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:327,009...449,375
Ensembl chr12:329,714...449,556 		JBrowse link
G VCL vinculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,700,143...76,811,875
Ensembl chr14:76,700,173...76,811,869 		JBrowse link
G ZNF703 zinc finger protein 703 involved_in ISO (PMID:21317240) UniProt PMID:21317240 NCBI chr15:48,692,316...48,696,639
Ensembl chr15:48,692,320...48,696,644 		JBrowse link
adherens junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FER FER tyrosine kinase ISO RGD PMID:12700184 RGD:2291909 NCBI chr 2:113,774,120...114,207,307
Ensembl chr 2:113,774,412...114,206,930 		JBrowse link
adherens junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 1:1,569,652...1,698,475
Ensembl chr 1:1,570,272...1,698,694 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,519,681...182,606,890
Ensembl chr 1:182,519,684...182,606,869 		JBrowse link
G INAVA innate immunity activator involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr10:23,392,202...23,414,318
Ensembl chr10:23,392,099...23,412,712 		JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21406566) MGI
GO_Central		 PMID:21406566 GO_REF:0000033 NCBI chr 4:14,933,290...15,103,256
Ensembl chr 4:14,933,331...15,103,253 		JBrowse link
G PKP2 plakophilin 2 ISO RGD PMID:18261826 RGD:6784508 NCBI chr 5:41,424,687...41,509,590
Ensembl chr 5:41,424,845...41,508,868 		JBrowse link
G TJP1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr 1:144,930,387...145,195,857
Ensembl chr 1:144,930,370...145,195,836 		JBrowse link
adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,289,480...113,407,940
Ensembl chr 1:113,289,209...113,412,798 		JBrowse link
G CDC42 cell division cycle 42 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16892058) Ensembl
MGI		 PMID:16892058 GO_REF:0000107 NCBI chr 6:80,035,034...80,089,243
Ensembl chr 6:80,035,123...80,089,233 		JBrowse link
G CDH1 cadherin 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986 		JBrowse link
G CDH10 cadherin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:12,094,687...12,277,672
Ensembl chr16:12,094,710...12,277,315 		JBrowse link
G CDH11 cadherin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:25,782,746...25,933,753
Ensembl chr 6:25,783,597...25,933,634 		JBrowse link
G CDH12 cadherin 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:9,985,759...10,975,489
Ensembl chr16:9,985,126...10,384,663 		JBrowse link
G CDH13 cadherin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:4,809,752...5,832,188
Ensembl chr 6:4,808,255...5,832,415 		JBrowse link
G CDH15 cadherin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:636,350...652,260
Ensembl chr 6:636,377...652,165 		JBrowse link
G CDH17 cadherin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:42,508,852...42,597,888
Ensembl chr 4:42,515,276...42,597,772 		JBrowse link
G CDH18 cadherin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:8,090,253...9,117,046
Ensembl chr16:8,098,686...8,578,235 		JBrowse link
G CDH19 cadherin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:155,669,361...155,758,550
Ensembl chr 1:155,669,420...155,758,548 		JBrowse link
G CDH2 cadherin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432 		JBrowse link
G CDH20 cadherin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:159,817,091...160,024,985
Ensembl chr 1:159,817,159...159,917,145 		JBrowse link
G CDH22 cadherin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:48,339,683...48,471,705
Ensembl chr17:48,339,694...48,413,799 		JBrowse link
G CDH24 cadherin 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:75,990,185...76,001,133
Ensembl chr 7:75,990,220...76,001,130 		JBrowse link
G CDH3 cadherin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:18,190,971...18,236,184
Ensembl chr 6:18,191,664...18,235,862 		JBrowse link
G CDH4 cadherin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:60,959,236...61,454,154
Ensembl chr17:60,959,190...61,451,878 		JBrowse link
G CDH5 cadherin 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,597...27,142,177 		JBrowse link
G CDH6 cadherin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:17,531,862...17,660,081
Ensembl chr16:17,531,892...17,660,079 		JBrowse link
G CDH7 cadherin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:156,295,885...156,436,375
Ensembl chr 1:156,295,434...156,435,822 		JBrowse link
G CDH8 cadherin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:22,922,965...23,644,501
Ensembl chr 6:22,923,781...23,279,241 		JBrowse link
G CDH9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:13,938,711...14,076,498
Ensembl chr16:13,944,245...14,076,030 		JBrowse link
G CSK C-terminal Src kinase involved_in ISO
IBA		 RGD
GO_Central		 PMID:15389520 GO_REF:0000033 RGD:5134367 NCBI chr 7:58,736,473...58,755,034
Ensembl chr 7:58,736,531...58,755,260 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19129494) Ensembl
MGI		 PMID:19129494 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DSP desmoplakin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11781569) Ensembl
MGI		 PMID:11781569 GO_REF:0000107 NCBI chr 7:4,862,649...4,915,626
Ensembl chr 7:4,862,649...4,915,623 		JBrowse link
G EFNB2 ephrin B2 involved_in ISO (PMID:30639848) ARUK-UCL PMID:30639848 NCBI chr11:74,188,337...74,232,768
Ensembl chr11:74,186,640...74,233,354 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:123,350,867...123,501,872
Ensembl chr15:123,352,816...123,503,126 		JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17589506) Ensembl
MGI		 PMID:17589506 GO_REF:0000107 NCBI chr 7:96,624,270...96,798,690
Ensembl chr 7:96,624,274...96,799,288 		JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17589506) Ensembl
MGI		 PMID:17589506 GO_REF:0000107 NCBI chr 6:48,890,056...48,918,195
Ensembl chr 6:48,889,801...48,918,173 		JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:696,355...753,859
Ensembl chr 4:689,034...753,696 		JBrowse link
G SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (PMID:26787558) MGI PMID:26787558 NCBI chr14:49,332,937...49,463,965
Ensembl chr14:49,333,009...49,463,963 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:15389520 RGD:5134367 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (PMID:24328732) Alzheimers_University_of_Toronto
Ensembl		 PMID:24328732 GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
G CHRDL1 chordin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:90,703,422...90,827,216
Ensembl chr  X:90,703,428...90,827,210 		JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:52,550,138...52,574,021
Ensembl chr12:52,550,141...52,575,143 		JBrowse link
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chr 3:66,128,650...66,884,916
Ensembl chr 3:66,128,689...66,884,740 		JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21558424), (PMID:21795692) CACAO PMID:21558424 PMID:21795692 NCBI chr 5:41,376...93,033
Ensembl chr 5:41,786...93,177 		JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN19 claudin 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15883201) Ensembl
MGI		 PMID:15883201 GO_REF:0000107 NCBI chr 6:168,695,246...168,699,683
Ensembl chr 6:168,695,246...168,699,924 		JBrowse link
G CTNNA1 catenin alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22411810)
(PMID:16543460)		 Ensembl
MGI		 PMID:16543460 PMID:22411810 GO_REF:0000107 NCBI chr 2:140,682,776...140,869,828
Ensembl chr 2:140,682,371...140,871,334 		JBrowse link
G FBF1 Fas binding factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,482,576...5,510,971
Ensembl chr12:5,482,498...5,510,024 		JBrowse link
G PKN2 protein kinase N2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:127,579,097...127,709,982
Ensembl chr 4:127,573,703...127,709,942 		JBrowse link
G RHOA ras homolog family member A involved_in IEA
ISS		 Ensembl
AgBase		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607 		JBrowse link
G RHOC ras homolog family member C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,731,713...107,737,705
Ensembl chr 4:107,731,539...107,737,705 		JBrowse link
G VCL vinculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,700,143...76,811,875
Ensembl chr14:76,700,173...76,811,869 		JBrowse link
G WDR1 WD repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:6,413,338...6,452,383
Ensembl chr 8:6,413,347...6,452,346 		JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 involved_in ISO (PMID:18332111) UniProt PMID:18332111 NCBI chr 6:47,493,834...47,565,999
Ensembl chr 6:47,493,919...47,565,998 		JBrowse link
G AFDN afadin, adherens junction formation factor involved_in ISO (PMID:27815408) ARUK-UCL PMID:27815408 NCBI chr 1:1,569,652...1,698,475
Ensembl chr 1:1,570,272...1,698,694 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (PMID:17403930) UniProt PMID:17403930 NCBI chr12:53,292,530...53,302,850
Ensembl chr12:53,292,526...53,302,993 		JBrowse link
G ALOXE3 arachidonate lipoxygenase 3 NOT|involved_in ISO (PMID:22832496) UniProt PMID:22832496 NCBI chr12:53,309,845...53,331,780
Ensembl chr12:53,309,848...53,331,523 		JBrowse link
G CDH1 cadherin 1 acts_upstream_of_or_within ISO (PMID:15775979) MGI PMID:15775979 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986 		JBrowse link
G CDH5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,597...27,142,177 		JBrowse link
G CGN cingulin acts_upstream_of_or_within ISO (PMID:24385485) MGI PMID:24385485 NCBI chr 4:97,704,805...97,730,498 JBrowse link
G CLDN1 claudin 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLDN10 claudin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:65,027,706...65,145,002
Ensembl chr11:65,121,607...65,145,072 		JBrowse link
G CLDN11 claudin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:109,075,672...109,089,097
Ensembl chr13:109,075,452...109,090,111 		JBrowse link
G CLDN14 claudin 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:200,121,796...200,201,712
Ensembl chr13:200,128,477...200,145,525 		JBrowse link
G CLDN15 claudin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:8,931,099...8,937,189
Ensembl chr 3:8,931,097...8,937,184 		JBrowse link
G CLDN16 claudin 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:127,808,599...127,831,081
Ensembl chr13:127,808,599...127,830,717 		JBrowse link
G CLDN17 claudin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:193,516,598...193,517,462
Ensembl chr13:193,516,598...193,517,462 		JBrowse link
G CLDN18 claudin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:78,794,573...78,823,761
Ensembl chr13:78,794,580...78,822,796 		JBrowse link
G CLDN19 claudin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:168,695,246...168,699,683
Ensembl chr 6:168,695,246...168,699,924 		JBrowse link
G CLDN2 claudin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:87,352,695...87,355,724
Ensembl chr  X:87,321,152...87,355,721 		JBrowse link
G CLDN20 claudin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:11,617,807...11,618,550
Ensembl chr 1:11,617,807...11,618,550 		JBrowse link
G CLDN22 claudin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:44,804,228...44,804,908
Ensembl chr15:44,804,228...44,804,908 		JBrowse link
G CLDN23 claudin 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:483,635...484,686
Ensembl chr17:481,527...484,859 		JBrowse link
G CLDN25 claudin 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:41,407,244...41,408,058
Ensembl chr 9:41,407,272...41,408,995 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:20655293), (PMID:25849148) UniProt PMID:20655293 PMID:25849148 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,073...11,020,102 		JBrowse link
G CLDN4 claudin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:11,039,711...11,053,930
Ensembl chr 3:11,039,706...11,053,925 		JBrowse link
G CLDN5 claudin 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,042...51,163,482 		JBrowse link
G CLDN6 claudin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:39,168,506...39,172,631
Ensembl chr 3:39,167,853...39,172,628 		JBrowse link
G CLDN7 claudin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:52,612,517...52,628,376
Ensembl chr12:52,612,510...52,628,362 		JBrowse link
G CLDN8 claudin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:193,563,314...193,564,090
Ensembl chr13:193,562,074...193,564,168 		JBrowse link
G CLDN9 claudin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:39,172,731...39,181,827
Ensembl chr 3:39,172,853...39,174,354 		JBrowse link
G CTNNB1 catenin beta 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841 		JBrowse link
G ECT2 epithelial cell transforming 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,248,215...111,310,746
Ensembl chr13:111,248,131...111,314,828 		JBrowse link
G ESAM endothelial cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,983,019...51,992,415
Ensembl chr 9:51,983,023...51,992,393 		JBrowse link
G FRMPD2 FERM and PDZ domain containing 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:88,847,972...88,966,206
Ensembl chr14:88,864,884...88,966,188 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919 		JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:18579774 RGD:2325293 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G LOC102167259 claudin-34 involved_in IBA GO_Central GO_REF:0000033
G LOC110258627 claudin-34-like involved_in IBA GO_Central GO_REF:0000033
G LOC110258628 claudin-34-like involved_in IBA GO_Central GO_REF:0000033
G LOC396566 claudin 1-like involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:93,939,938...94,073,596 JBrowse link
G MARVELD2 MARVEL domain containing 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:47,529,857...47,563,485
Ensembl chr16:47,530,068...47,563,482 		JBrowse link
G MARVELD3 MARVEL domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,616,508...14,630,798
Ensembl chr 6:14,616,481...14,625,983 		JBrowse link
G MICALL2 MICAL like 2 involved_in ISO (PMID:18094055) UniProt PMID:18094055 NCBI chr 3:951,330...971,129
Ensembl chr 3:951,327...971,108 		JBrowse link
G MPP7 MAGUK p55 scaffold protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:39,532,374...39,798,357
Ensembl chr10:39,532,370...39,798,356 		JBrowse link
G MTDH metadherin ISO RGD PMID:15383321 RGD:1359738 NCBI chr 4:39,052,895...39,113,380
Ensembl chr 4:39,051,537...39,113,385 		JBrowse link
G OCEL1 occludin/ELL domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:60,442,203...60,445,016
Ensembl chr 2:60,442,228...60,445,008 		JBrowse link
G OCLN occludin involved_in IEA
IBA		 Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,212...47,654,033 		JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,276,122...133,383,506
Ensembl chr13:133,273,112...133,389,458 		JBrowse link
G PARD3 par-3 family cell polarity regulator involved_in ISO PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr10:56,968,100...57,600,515
Ensembl chr10:56,967,434...57,600,456 		JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:27336173) UniProt PMID:27336173 NCBI chr13:19,597,064...19,664,047
Ensembl chr13:19,597,059...19,665,996 		JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293 		JBrowse link
G POF1B POF1B actin binding protein involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:68,503,170...68,579,917
Ensembl chr  X:68,503,179...68,579,893 		JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:95,705,093...95,709,942
Ensembl chr 4:95,705,220...95,711,729 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,092,204...20,094,426
Ensembl chr12:20,092,196...20,094,469 		JBrowse link
G SLC39A9 solute carrier family 39 member 9 involved_in ISO PMID:27164415
PMID:35625396		 UniProt PMID:27164415 PMID:35625396 RGD:155663535 RGD:155663545 NCBI chr 7:93,084,315...93,143,171
Ensembl chr 7:93,084,336...93,143,168 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20047077) Ensembl
MGI		 PMID:20047077 GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
G TBCD tubulin folding cofactor D involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:327,009...449,375
Ensembl chr12:329,714...449,556 		JBrowse link
G TJP1 tight junction protein 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chr 1:144,930,387...145,195,857
Ensembl chr 1:144,930,370...145,195,836 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17767158) Ensembl
MGI		 PMID:17767158 GO_REF:0000107 NCBI chr 9:10,413,182...10,435,158
Ensembl chr 9:10,413,263...10,435,100 		JBrowse link
cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,769,570...107,821,806
Ensembl chr 4:107,768,079...107,821,819 		JBrowse link
G CDC42 cell division cycle 42 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:80,035,034...80,089,243
Ensembl chr 6:80,035,123...80,089,233 		JBrowse link
G CLDN19 claudin 19 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 6:168,695,246...168,699,683
Ensembl chr 6:168,695,246...168,699,924 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,073...11,020,102 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919 		JBrowse link
G MYO9A myosin IXA involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:169,370,028...169,596,771
Ensembl chr 1:169,374,311...169,596,412 		JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:54,056,504...54,617,045
Ensembl chr  X:54,055,092...54,616,959 		JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607 		JBrowse link
G SH3BP1 SH3 domain binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,172,303...10,187,883
Ensembl chr 5:10,172,667...10,187,906 		JBrowse link
G VMP1 vacuole membrane protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:35,933,173...36,065,956 JBrowse link
cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN1 claudin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:12734665) ARUK-UCL PMID:12734665 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,073...11,020,102 		JBrowse link
G LOC396566 claudin 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,939,938...94,073,596 JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH1 cadherin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986 		JBrowse link
G CDH10 cadherin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:12,094,687...12,277,672
Ensembl chr16:12,094,710...12,277,315 		JBrowse link
G CDH11 cadherin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:25,782,746...25,933,753
Ensembl chr 6:25,783,597...25,933,634 		JBrowse link
G CDH12 cadherin 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:9,985,759...10,975,489
Ensembl chr16:9,985,126...10,384,663 		JBrowse link
G CDH13 cadherin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:4,809,752...5,832,188
Ensembl chr 6:4,808,255...5,832,415 		JBrowse link
G CDH15 cadherin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:636,350...652,260
Ensembl chr 6:636,377...652,165 		JBrowse link
G CDH17 cadherin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:42,508,852...42,597,888
Ensembl chr 4:42,515,276...42,597,772 		JBrowse link
G CDH18 cadherin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:8,090,253...9,117,046
Ensembl chr16:8,098,686...8,578,235 		JBrowse link
G CDH19 cadherin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:155,669,361...155,758,550
Ensembl chr 1:155,669,420...155,758,548 		JBrowse link
G CDH2 cadherin 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432 		JBrowse link
G CDH20 cadherin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:159,817,091...160,024,985
Ensembl chr 1:159,817,159...159,917,145 		JBrowse link
G CDH22 cadherin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:48,339,683...48,471,705
Ensembl chr17:48,339,694...48,413,799 		JBrowse link
G CDH24 cadherin 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:75,990,185...76,001,133
Ensembl chr 7:75,990,220...76,001,130 		JBrowse link
G CDH3 cadherin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:18,190,971...18,236,184
Ensembl chr 6:18,191,664...18,235,862 		JBrowse link
G CDH4 cadherin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:60,959,236...61,454,154
Ensembl chr17:60,959,190...61,451,878 		JBrowse link
G CDH5 cadherin 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,597...27,142,177 		JBrowse link
G CDH6 cadherin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:17,531,862...17,660,081
Ensembl chr16:17,531,892...17,660,079 		JBrowse link
G CDH7 cadherin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:156,295,885...156,436,375
Ensembl chr 1:156,295,434...156,435,822 		JBrowse link
G CDH8 cadherin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:22,922,965...23,644,501
Ensembl chr 6:22,923,781...23,279,241 		JBrowse link
G CDH9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:13,938,711...14,076,498
Ensembl chr16:13,944,245...14,076,030 		JBrowse link
G CLDN5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,042...51,163,482 		JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:61,029,186...61,045,400
Ensembl chr12:61,031,157...61,045,392 		JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,134,173...4,143,275
Ensembl chr 3:4,134,177...4,143,286 		JBrowse link
G HDAC7 histone deacetylase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16873063) Ensembl
MGI		 PMID:16873063 GO_REF:0000107 NCBI chr 5:78,150,554...78,186,051
Ensembl chr 5:78,150,561...78,186,072 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,294...83,684,604 		JBrowse link
G PKP4 plakophilin 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:65,431,173...65,680,891
Ensembl chr15:65,431,111...65,680,887 		JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:41,125,819...41,169,582
Ensembl chr14:41,125,869...41,169,578 		JBrowse link
cell-cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD177 CD177 molecule involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:50,246,165...50,255,935
Ensembl chr 6:50,246,365...50,255,713 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:36008380) UniProt PMID:36008380 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,073...11,020,102 		JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,147...151,147,633 		JBrowse link
G F2R coagulation factor II thrombin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:85,642,794...85,659,133
Ensembl chr 2:85,641,474...85,656,636 		JBrowse link
G F2RL1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:85,732,082...85,747,552
Ensembl chr 2:85,732,189...85,750,858 		JBrowse link
G KIRREL1 kirre like nephrin family adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:92,173,897...92,290,887
Ensembl chr 4:92,176,746...92,290,610 		JBrowse link
G MPZ myelin protein zero acts_upstream_of_or_within ISO (PMID:11749037) MGI PMID:11749037 NCBI chr 4:89,174,107...89,179,556
Ensembl chr 4:89,169,311...89,179,925 		JBrowse link
G MYADM myeloid associated differentiation marker NOT|involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chr 6:56,236,306...56,278,577
Ensembl chr 6:56,236,311...56,244,185 		JBrowse link
G PARD6A par-6 family cell polarity regulator alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,280,502...28,282,923
Ensembl chr 6:28,280,502...28,283,788 		JBrowse link
G PRTN3 proteinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,520,314...77,526,303
Ensembl chr 2:77,520,314...77,523,563 		JBrowse link
G SHROOM2 shroom family member 2 acts_upstream_of_or_within ISO (PMID:17666436) MGI PMID:17666436 NCBI chr  X:6,296,212...6,450,401
NCBI chr  Y:4,753,733...4,785,766
Ensembl chr  X:6,296,219...6,448,992 		JBrowse link
cell-cell junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHA15 basic helix-loop-helix family member a15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19013146) Ensembl
MGI		 PMID:19013146 GO_REF:0000107 NCBI chr 3:5,410,467...5,414,074
Ensembl chr 3:5,410,518...5,414,072 		JBrowse link
G CCM2 CCM2 scaffold protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19151727) Ensembl
MGI		 PMID:19151727 GO_REF:0000107 NCBI chr18:50,396,423...50,450,442
Ensembl chr18:50,396,424...50,450,132 		JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25968128)
(PMID:19013146)		 Ensembl
MGI		 PMID:19013146 PMID:25968128 GO_REF:0000107 NCBI chr 7:42,218,016...42,332,523
Ensembl chr 7:42,218,290...42,332,518 		JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO (PMID:23800882) UniProt PMID:23800882 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G CLDN1 claudin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20164257) MGI
Ensembl		 PMID:20164257 GO_REF:0000107 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLDN6 claudin 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17130295) Ensembl
MGI		 PMID:17130295 GO_REF:0000107 NCBI chr 3:39,168,506...39,172,631
Ensembl chr 3:39,167,853...39,172,628 		JBrowse link
G CLDN9 claudin 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17130295) Ensembl
MGI		 PMID:17130295 GO_REF:0000107 NCBI chr 3:39,172,731...39,181,827
Ensembl chr 3:39,172,853...39,174,354 		JBrowse link
G CXADR CXADR Ig-like cell adhesion molecule acts_upstream_of_or_within ISO (PMID:16543498) MGI PMID:16543498 NCBI chr13:182,134,416...182,185,977
Ensembl chr13:182,134,566...182,185,950 		JBrowse link
G FLNA filamin A involved_in ISO (PMID:17172441) UniProt PMID:17172441 NCBI chr  X:124,889,934...124,915,000
Ensembl chr  X:124,890,162...124,914,992 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9620080) Ensembl
MGI		 PMID:9620080 GO_REF:0000107 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G HEG1 heart development protein with EGF like domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19151727) Ensembl
MGI		 PMID:19151727 GO_REF:0000107 NCBI chr13:135,268,566...135,358,673
Ensembl chr13:135,298,377...135,358,670 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:12749857 RGD:1625017 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,500 		JBrowse link
G LIMS1 LIM zinc finger domain containing 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:19652092) GO_Central
MGI		 PMID:19652092 GO_REF:0000033 NCBI chr 3:47,607,737...47,704,921
Ensembl chr 3:47,606,230...47,672,884 		JBrowse link
G LIMS2 LIM zinc finger domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:19652092) Ensembl
MGI
GO_Central		 PMID:19652092 GO_REF:0000033 GO_REF:0000107 NCBI chr15:59,672,508...59,709,380
Ensembl chr15:59,672,540...59,709,379 		JBrowse link
G LOC396566 claudin 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:93,939,938...94,073,596 JBrowse link
G MAMDC4 MAM domain containing 4 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G MARVELD2 MARVEL domain containing 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20164257)
(PMID:16365161)
(PMID:23979167)		 MGI
Ensembl		 PMID:16365161 PMID:20164257 PMID:23979167 GO_REF:0000107 NCBI chr16:47,529,857...47,563,485
Ensembl chr16:47,530,068...47,563,482 		JBrowse link
G MARVELD3 MARVEL domain containing 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20164257) MGI
Ensembl		 PMID:20164257 GO_REF:0000107 NCBI chr 6:14,616,508...14,630,798
Ensembl chr 6:14,616,481...14,625,983 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12695331) Ensembl
MGI		 PMID:12695331 GO_REF:0000107 NCBI chr14:46,653,869...46,726,421
Ensembl chr14:46,653,900...46,731,999 		JBrowse link
G OCLN occludin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20164257) MGI
Ensembl		 PMID:20164257 GO_REF:0000107 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,212...47,654,033 		JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:20875407) Ensembl
UniProt		 PMID:20875407 GO_REF:0000107 NCBI chr 7:45,447,354...45,925,141
Ensembl chr 7:45,450,950...45,925,149 		JBrowse link
G PRKCI protein kinase C iota involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:108,913,018...108,997,934
Ensembl chr13:108,913,173...108,997,931 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,780...4,803,543 		JBrowse link
G SMAD3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TGFB3 transforming growth factor beta 3 involved_in IEA
ISS		 Ensembl
AgBase		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:99,133,873...99,162,239
Ensembl chr 7:99,133,879...99,162,232 		JBrowse link
G TJP1 tight junction protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:144,930,387...145,195,857
Ensembl chr 1:144,930,370...145,195,836 		JBrowse link
G TJP2 tight junction protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:222,474,518...222,612,989
Ensembl chr 1:222,474,639...222,612,983 		JBrowse link
G TJP3 tight junction protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:74,938,153...74,971,431
Ensembl chr 2:74,938,152...74,971,531 		JBrowse link
G TMIGD1 transmembrane and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33129760) Ensembl
MGI		 PMID:33129760 GO_REF:0000107 NCBI chr12:46,411,943...46,429,996
Ensembl chr12:46,411,946...46,430,007 		JBrowse link
G XIRP2 xin actin binding repeat containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20360251) Ensembl
MGI		 PMID:20360251 GO_REF:0000107 NCBI chr15:73,665,876...73,741,046
Ensembl chr15:73,422,267...73,741,134 		JBrowse link
cell-substrate junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN1 fibronectin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12867986) Ensembl
MGI
GO_Central		 PMID:12867986 GO_REF:0000033 GO_REF:0000107 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,043 		JBrowse link
G ITGA5 integrin subunit alpha 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12867986) Ensembl
MGI		 PMID:12867986 GO_REF:0000107 NCBI chr 5:19,587,361...19,610,580
Ensembl chr 5:19,586,746...19,610,362 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:12867986) Ensembl
MGI
AgBase		 PMID:12867986 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,514...16,752,292 		JBrowse link
G TLN1 talin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12867986) Ensembl
MGI		 PMID:12867986 GO_REF:0000107 NCBI chr 1:236,416,041...236,450,978
Ensembl chr 1:236,416,044...236,450,922 		JBrowse link
G TNS1 tensin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9087448) Ensembl
MGI		 PMID:9087448 GO_REF:0000107 NCBI chr15:119,948,133...120,143,797
Ensembl chr15:119,951,091...120,164,713 		JBrowse link
cell-substrate junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB8B RAB8B, member RAS oncogene family involved_in ISO PMID:12639940 UniProt PMID:12639940 RGD:8554779 NCBI chr 1:108,772,851...108,840,222
Ensembl chr 1:108,772,851...108,840,227 		JBrowse link
complement-mediated synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:80,586,259...80,589,213
Ensembl chr 6:80,586,280...80,589,204 		JBrowse link
G C3 complement C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,431,470...72,471,622
Ensembl chr 2:72,431,212...72,472,228 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:30548312) UniProt PMID:30548312 NCBI chr 7:36,465,921...36,471,509
Ensembl chr 7:36,465,324...36,471,516 		JBrowse link
dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23365224) MGI PMID:23365224 NCBI chr 9:120,888,891...120,984,724
Ensembl chr 9:120,892,952...120,984,695 		JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:23936366) MGI PMID:23936366 NCBI chr 2:15,680,723...15,790,580
Ensembl chr 2:15,680,787...15,790,569 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683) MGI PMID:31141683 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G CTTN cortactin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23365224) Ensembl
MGI		 PMID:23365224 GO_REF:0000107 NCBI chr 2:3,031,103...3,060,796
Ensembl chr 2:3,031,103...3,060,813 		JBrowse link
G IGF1R insulin like growth factor 1 receptor involved_in ISO PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chr 1:137,383,623...137,691,038
Ensembl chr 1:137,387,825...137,691,058 		JBrowse link
G INSR insulin receptor involved_in ISO PMID:19406747 ARUK-UCL PMID:19406747 RGD:13210538 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,104 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23595732) Ensembl
MGI		 PMID:23595732 GO_REF:0000107 NCBI chr12:26,234,769...26,269,327
Ensembl chr12:26,235,258...26,269,324 		JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 1:129,867,261...129,877,762
Ensembl chr 1:129,867,642...129,875,639 		JBrowse link
G MTMR2 myotubularin related protein 2 involved_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 9:27,864,335...27,974,448
Ensembl chr 9:27,854,491...27,974,423 		JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:9,808,444...9,829,677
Ensembl chr 5:9,808,451...9,825,539 		JBrowse link
G TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21068316) Ensembl
MGI		 PMID:21068316 GO_REF:0000107 NCBI chr15:65,920,168...66,166,000
Ensembl chr15:65,920,292...66,165,991 		JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31980586) ARUK-UCL PMID:31980586 NCBI chr 7:36,465,921...36,471,509
Ensembl chr 7:36,465,324...36,471,516 		JBrowse link
dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:80,035,034...80,089,243
Ensembl chr 6:80,035,123...80,089,233 		JBrowse link
G CTNND2 catenin delta 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:508,630...1,521,773
Ensembl chr16:508,637...1,521,749 		JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISO (PMID:31600191) UniProt PMID:31600191
G DLG4 discs large MAGUK scaffold protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,550,138...52,574,021
Ensembl chr12:52,550,141...52,575,143 		JBrowse link
G DOCK10 dedicator of cytokinesis 10 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:126,435,577...126,711,755
Ensembl chr15:126,435,579...126,711,531 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in ISO PMID:21670302 ParkinsonsUK-UCL PMID:21670302 RGD:10449514 NCBI chr 6:63,617,787...63,628,965
Ensembl chr 6:63,617,789...63,628,913 		JBrowse link
G EPHA5 EPH receptor A5 involved_in ISO PMID:20824214 UniProt PMID:20824214 RGD:8554330 NCBI chr 8:63,285,006...63,604,734
Ensembl chr 8:63,287,711...63,604,734 		JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17310244) Ensembl
MGI		 PMID:17310244 GO_REF:0000107 NCBI chr13:75,904,678...76,351,540
Ensembl chr13:75,905,676...76,345,534 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17310244) Ensembl
MGI		 PMID:17310244 GO_REF:0000107 NCBI chr 6:80,649,098...80,849,979
Ensembl chr 6:80,650,740...80,843,567 		JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:122,467,561...122,488,296
Ensembl chr13:122,467,588...122,488,292 		JBrowse link
G HDAC6 histone deacetylase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24113571) Ensembl
MGI		 PMID:24113571 GO_REF:0000107 NCBI chr  X:42,917,911...42,941,894
Ensembl chr  X:42,917,964...42,941,887 		JBrowse link
G MYO5B myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chr 1:99,418,242...99,810,934
Ensembl chr 1:99,418,449...99,810,139 		JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:90,941,976...91,244,331
Ensembl chr  X:90,942,077...91,238,565 		JBrowse link
G PRMT3 protein arginine methyltransferase 3 ISO RGD PMID:20647003 RGD:9491824 NCBI chr 2:38,884,311...39,032,944
Ensembl chr 2:38,884,362...39,032,996 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:18082964), (PMID:21411674) CACAO PMID:18082964 PMID:21411674 NCBI chr14:99,929,590...100,021,619 JBrowse link
G SEPTIN7 septin 7 acts_upstream_of_or_within ISO (PMID:24113571) MGI PMID:24113571 NCBI chr18:38,082,626...38,183,354
Ensembl chr18:38,068,303...38,284,645 		JBrowse link
G SHANK1 SH3 and multiple ankyrin repeat domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:55,452,095...55,496,304
Ensembl chr 6:55,451,094...55,499,031 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:21558424)
(PMID:21167025), (PMID:21423165), (PMID:21558424)		 MGI
BHF-UCL		 PMID:21167025 PMID:21423165 PMID:21558424 NCBI chr 5:41,376...93,033
Ensembl chr 5:41,786...93,177 		JBrowse link
G WASL WASP like actin nucleation promoting factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:23,722,188...23,789,516
Ensembl chr18:23,722,188...23,789,506 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:65,861,398...65,888,341
Ensembl chr14:65,861,564...65,888,335 		JBrowse link
dendritic spine organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF1 ADP ribosylation factor 1 involved_in ISO PMID:23889934 UniProt PMID:23889934 RGD:8553918 NCBI chr 2:51,219,597...51,237,640
Ensembl chr 2:51,219,667...51,237,639 		JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:142,803,697...142,937,124
Ensembl chr 1:142,803,701...142,937,123 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683) MGI PMID:31141683 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr12:52,550,138...52,574,021
Ensembl chr12:52,550,141...52,575,143 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,750,700...33,143,499 		JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,176,217...114,210,096
Ensembl chr 7:114,173,693...114,217,102 		JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISO PMID:21252856 UniProt PMID:21252856 RGD:8554238 NCBI chr 5:9,808,444...9,829,677
Ensembl chr 5:9,808,451...9,825,539 		JBrowse link
G RPH3A rabphilin 3A involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr14:38,867,095...39,162,052
Ensembl chr14:38,867,099...38,969,169 		JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH1 cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986 		JBrowse link
G DSG3 desmoglein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,352,005...115,383,750
Ensembl chr 6:115,351,925...115,383,743 		JBrowse link
G JUP junction plakoglobin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18496566), (PMID:8954745), (PMID:9847250) Ensembl
MGI		 PMID:8954745 PMID:9847250 PMID:18496566 GO_REF:0000107 NCBI chr12:20,902,395...20,931,208
Ensembl chr12:20,901,396...20,931,210 		JBrowse link
G PKP1 plakophilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,689,394...23,735,457
Ensembl chr10:23,689,380...23,735,453 		JBrowse link
G PKP2 plakophilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,424,687...41,509,590
Ensembl chr 5:41,424,845...41,508,868 		JBrowse link
G PKP3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:214,238...222,762
Ensembl chr 2:214,170...223,511 		JBrowse link
G PRKCA protein kinase C alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554 		JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:79,264,880...79,268,475
Ensembl chr 4:79,264,880...79,268,475 		JBrowse link
desmosome maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSC1 desmocollin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,042,225...115,076,097
Ensembl chr 6:115,039,722...115,076,097 		JBrowse link
G PKP1 plakophilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,689,394...23,735,457
Ensembl chr10:23,689,380...23,735,453 		JBrowse link
desmosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSG2 desmoglein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,400,223...115,453,763
Ensembl chr 6:115,400,243...115,454,340 		JBrowse link
G DSP desmoplakin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9864371) Ensembl
MGI		 PMID:9864371 GO_REF:0000107 NCBI chr 7:4,862,649...4,915,626
Ensembl chr 7:4,862,649...4,915,623 		JBrowse link
G GRHL1 grainyhead like transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24586629) Ensembl
MGI		 PMID:24586629 GO_REF:0000107 NCBI chr 3:126,462,946...126,511,185
Ensembl chr 3:126,463,387...126,511,321 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18703497) Ensembl
MGI		 PMID:18703497 GO_REF:0000107 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,304 		JBrowse link
G PERP p53 apoptosis effector related to PMP22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21285247) Ensembl
MGI		 PMID:21285247 GO_REF:0000107 NCBI chr 1:26,301,254...26,317,046
Ensembl chr 1:26,301,252...26,317,868 		JBrowse link
G PKP2 plakophilin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:41,424,687...41,509,590
Ensembl chr 5:41,424,845...41,508,868 		JBrowse link
G PKP3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:214,238...222,762
Ensembl chr 2:214,170...223,511 		JBrowse link
establishment of synaptic specificity at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHAT choline O-acetyltransferase acts_upstream_of_or_within ISO (PMID:12533614) MGI PMID:12533614 NCBI chr14:90,117,464...90,167,611
Ensembl chr14:90,117,464...90,167,611 		JBrowse link
G F2R coagulation factor II thrombin receptor involved_in ISO
ISS		 RGD
UniProt		 PMID:12815704 GO_REF:0000024 RGD:1582330 NCBI chr 2:85,642,794...85,659,133
Ensembl chr 2:85,641,474...85,656,636 		JBrowse link
G GPHN gephyrin acts_upstream_of_or_within ISO (PMID:10531433) MGI PMID:10531433 NCBI chr 7:90,345,726...90,913,625
Ensembl chr 7:90,346,714...90,916,455 		JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:24094106) UniProt PMID:24094106 NCBI chr 5:63,572,062...63,612,177
Ensembl chr 5:63,572,065...63,599,525 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683)
(PMID:23074245)		 MGI PMID:23074245 PMID:31141683 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:125,821,195...127,130,617
Ensembl chr 8:125,819,951...127,129,763 		JBrowse link
G LRRC4 leucine rich repeat containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16980967) Ensembl
MGI
GO_Central		 PMID:16980967 GO_REF:0000033 GO_REF:0000107 NCBI chr18:20,319,317...20,322,875
Ensembl chr18:20,319,701...20,322,848 		JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
G NPTN neuroplastin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24554721) Ensembl
MGI		 PMID:24554721 GO_REF:0000107 NCBI chr 7:59,768,414...59,840,594
Ensembl chr 7:59,714,080...59,840,591 		JBrowse link
G PLXNB2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:390,347...416,805
Ensembl chr 5:403,765...416,798 		JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,838,062...67,117,315
Ensembl chr 9:66,838,123...67,117,315 		JBrowse link
excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29752066) ARUK-UCL PMID:29752066 NCBI chr 7:36,465,921...36,471,509
Ensembl chr 7:36,465,324...36,471,516 		JBrowse link
filtration diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27711214) Ensembl
MGI		 PMID:27711214 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN1 actinin alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,550,132...92,644,842
Ensembl chr 7:92,550,007...92,644,842 		JBrowse link
G ACTN2 actinin alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:54,670,727...54,742,717
Ensembl chr14:54,666,623...54,742,778 		JBrowse link
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,860,391...5,874,124 		JBrowse link
G AJUBA ajuba LIM protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728191) Ensembl
MGI		 PMID:15728191 GO_REF:0000107 NCBI chr 7:76,063,009...76,072,884
Ensembl chr 7:76,063,058...76,076,585 		JBrowse link
G ARHGAP6 Rho GTPase activating protein 6 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:10699171) MGI
GO_Central		 PMID:10699171 GO_REF:0000033 NCBI chr  X:7,910,851...8,441,579
Ensembl chr  X:7,910,858...8,120,386 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15292044) Ensembl
MGI		 PMID:15292044 GO_REF:0000107 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,337,522...158,518,879 		JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,208,662...49,322,109
Ensembl chr14:49,208,762...49,322,103 		JBrowse link
G CDH11 cadherin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:25,782,746...25,933,753
Ensembl chr 6:25,783,597...25,933,634 		JBrowse link
G CORO2B coronin 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29162887) Ensembl
MGI		 PMID:29162887 GO_REF:0000107 NCBI chr 1:166,465,870...166,608,840
Ensembl chr 1:166,465,953...166,608,363 		JBrowse link
G CTTN cortactin involved_in ISO PMID:18768925 UniProt PMID:18768925 RGD:10047281 NCBI chr 2:3,031,103...3,060,796
Ensembl chr 2:3,031,103...3,060,813 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr17:1,169,709...1,637,171
Ensembl chr17:1,170,208...1,637,114 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,519,681...182,606,890
Ensembl chr 1:182,519,684...182,606,869 		JBrowse link
G ITGA2 integrin subunit alpha 2 ISO RGD PMID:15591055 RGD:8693310 NCBI chr16:32,336,240...32,440,311
Ensembl chr16:32,336,292...32,437,103 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:14585963 RGD:1581775 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601 		JBrowse link
G PEAK1 pseudopodium enriched atypical kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,219,506...57,503,807
Ensembl chr 7:57,223,851...57,503,639 		JBrowse link
G PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,012,941...98,062,166
Ensembl chr 4:98,012,945...98,056,815 		JBrowse link
G PPP1R21 protein phosphatase 1 regulatory subunit 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26437238) Ensembl
MGI		 PMID:26437238 GO_REF:0000107 NCBI chr 3:92,091,763...92,145,386
Ensembl chr 3:92,092,635...92,109,713 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta ISO RGD PMID:14585963 RGD:1581775 NCBI chr14:11,063,662...11,194,196
Ensembl chr14:11,064,492...11,194,192 		JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:34,693,363...35,258,699
Ensembl chr 1:34,693,368...35,258,699 		JBrowse link
G PXN paxillin acts_upstream_of_or_within ISO (PMID:14636584) MGI PMID:14636584 NCBI chr14:40,227,894...40,278,785
Ensembl chr14:40,227,895...40,278,734 		JBrowse link
G RCC2 regulator of chromosome condensation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,988,271...76,014,200
Ensembl chr 6:75,988,272...76,014,160 		JBrowse link
G RHOD ras homolog family member D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,392,546...5,404,214
Ensembl chr 2:5,392,547...5,404,339 		JBrowse link
G RHPN1 rhophilin Rho GTPase binding protein 1 acts_upstream_of_or_within ISO (PMID:25071083) MGI PMID:25071083 NCBI chr 4:1,123,098...1,133,030
Ensembl chr 4:1,123,105...1,132,966 		JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (PMID:9461600) UniProt PMID:9461600 NCBI chr14:106,895,764...107,137,469
Ensembl chr14:106,895,765...107,137,561 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
G TAOK2 TAO kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,178,347...18,198,092
Ensembl chr 3:18,177,737...18,198,085 		JBrowse link
G TESK2 testis associated actin remodelling kinase 2 involved_in ISO PMID:11418599 UniProt PMID:11418599 RGD:727318 NCBI chr 6:165,874,176...166,000,002
Ensembl chr 6:165,874,180...165,999,999 		JBrowse link
G THSD1 thrombospondin type 1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:15,668,435...15,698,031
Ensembl chr11:15,668,813...15,697,872 		JBrowse link
G THY1 Thy-1 cell surface antigen involved_in ISO PMID:15093746 UniProt PMID:15093746 RGD:8553684 NCBI chr 9:46,607,022...46,612,691
Ensembl chr 9:46,607,494...46,612,269 		JBrowse link
G WHAMM WASP homolog associated with actin, golgi membranes and microtubules involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:52,108,867...52,140,333
Ensembl chr 7:52,108,869...52,140,203 		JBrowse link
focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1R21 protein phosphatase 1 regulatory subunit 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26437238) Ensembl
MGI		 PMID:26437238 GO_REF:0000107 NCBI chr 3:92,091,763...92,145,386
Ensembl chr 3:92,092,635...92,109,713 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLRB glycine receptor beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19723286) Ensembl
MGI		 PMID:19723286 GO_REF:0000107 NCBI chr 8:45,912,869...46,034,455
Ensembl chr 8:45,912,938...46,034,448 		JBrowse link
G GPHN gephyrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19723286) Ensembl
MGI		 PMID:19723286 GO_REF:0000107 NCBI chr 7:90,345,726...90,913,625
Ensembl chr 7:90,346,714...90,916,455 		JBrowse link
G LHFPL4 LHFPL tetraspan subfamily member 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:65,867,124...65,920,887
Ensembl chr13:65,869,652...65,919,781 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G SHISA7 shisa family member 7 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:59,582,706...59,601,979
Ensembl chr 6:59,582,708...59,601,885 		JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA1 catenin alpha 1 ISO RGD PMID:12577316 RGD:2289808 NCBI chr 2:140,682,776...140,869,828
Ensembl chr 2:140,682,371...140,871,334 		JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:99,854,129...99,871,288
Ensembl chr 4:99,854,392...99,871,286 		JBrowse link
G GJB2 gap junction protein beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24590285) Ensembl
MGI		 PMID:24590285 GO_REF:0000107 NCBI chr11:774,090...781,252
Ensembl chr11:775,166...775,846 		JBrowse link
G GJB6 gap junction protein beta 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:793,276...800,109
Ensembl chr11:793,280...800,046 		JBrowse link
G GJC1 gap junction protein gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:18,526,060...18,560,221
Ensembl chr12:18,526,595...18,560,218 		JBrowse link
G GJD3 gap junction protein delta 3 involved_in ISO (PMID:12154091) UniProt PMID:12154091 NCBI chr12:22,040,312...22,044,238 JBrowse link
G PKP2 plakophilin 2 ISO RGD PMID:17673670 RGD:6784510 NCBI chr 5:41,424,687...41,509,590
Ensembl chr 5:41,424,845...41,508,868 		JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRXN1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G NRXN2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chr 2:7,454,771...7,554,180
Ensembl chr 2:7,478,750...7,515,943 		JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29107521) Ensembl
MGI		 PMID:29107521 GO_REF:0000107 NCBI chr13:104,443,610...104,461,850
Ensembl chr13:104,449,973...104,461,119 		JBrowse link
G ZDHHC12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:269,081,274...269,084,853
Ensembl chr 1:269,081,272...269,084,840 		JBrowse link
G ZER1 zyg-11 related cell cycle regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:269,088,696...269,121,895
Ensembl chr 1:269,090,159...269,108,256 		JBrowse link
glycine receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPHN gephyrin acts_upstream_of_or_within ISO (PMID:9812897) MGI PMID:9812897 NCBI chr 7:90,345,726...90,913,625
Ensembl chr 7:90,346,714...90,916,455 		JBrowse link
guanylate kinase-associated protein clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRXN1 neurexin 1 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21558424) CACAO PMID:21558424 NCBI chr 5:41,376...93,033
Ensembl chr 5:41,786...93,177 		JBrowse link
hemidesmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL17A1 collagen type XVII alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:114,959,404...115,007,734
Ensembl chr14:114,959,411...115,064,783 		JBrowse link
G DST dystonin involved_in ISO (PMID:12482924) UniProt PMID:12482924 NCBI chr 7:28,812,423...29,300,149
Ensembl chr 7:28,812,252...29,300,152 		JBrowse link
G ITGB4 integrin subunit beta 4 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr12:5,651,292...5,685,601
Ensembl chr12:5,651,292...5,685,611 		JBrowse link
G LAMA3 laminin subunit alpha 3 ISO RGD PMID:8923212 RGD:633107 NCBI chr 6:108,548,818...108,805,700
Ensembl chr 6:108,548,715...108,805,690 		JBrowse link
G LAMC1 laminin subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,283,668...124,405,967
Ensembl chr 9:124,283,224...124,405,964 		JBrowse link
G PLEC plectin involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:696,355...753,859
Ensembl chr 4:689,034...753,696 		JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLN4 cerebellin 4 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,674,872...56,683,261
Ensembl chr17:56,674,872...56,683,261 		JBrowse link
G CLSTN2 calsyntenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:80,789,239...81,461,348
Ensembl chr13:80,789,195...81,450,657 		JBrowse link
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:24094106) UniProt PMID:24094106 NCBI chr 5:63,572,062...63,612,177
Ensembl chr 5:63,572,065...63,599,525 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683)
(PMID:23074245)		 MGI PMID:23074245 PMID:31141683 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISO (PMID:30679375) UniProt PMID:30679375 NCBI chr  X:113,460,191...113,955,691
Ensembl chr  X:113,460,191...113,932,715 		JBrowse link
G GABRA1 gamma-aminobutyric acid type A receptor subunit alpha1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:61,656,583...61,723,428
Ensembl chr16:61,656,587...61,723,119 		JBrowse link
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:36,344,633...36,474,840
Ensembl chr 8:36,347,040...36,474,627 		JBrowse link
G GABRA3 gamma-aminobutyric acid type A receptor subunit alpha3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:123,456,952...123,684,814
Ensembl chr  X:123,456,947...123,684,790 		JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:36,875,649...36,943,016
Ensembl chr 8:36,874,331...36,942,773 		JBrowse link
G GABRA5 gamma-aminobutyric acid type A receptor subunit alpha5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:140,486,107...140,568,204
Ensembl chr 1:140,486,104...140,567,894 		JBrowse link
G GABRA6 gamma-aminobutyric acid type A receptor subunit alpha6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:61,855,698...61,872,503
Ensembl chr16:61,855,468...61,872,279 		JBrowse link
G GABRB2 gamma-aminobutyric acid type A receptor subunit beta2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:61,984,923...62,240,902
Ensembl chr16:61,984,925...62,239,937 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:140,566,443...140,906,516
Ensembl chr 1:140,566,540...140,905,623 		JBrowse link
G GABRE gamma-aminobutyric acid type A receptor subunit epsilon involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:123,278,459...123,296,070
Ensembl chr  X:123,278,949...123,296,091 		JBrowse link
G GABRG1 gamma-aminobutyric acid type A receptor subunit gamma1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:36,198,056...36,262,492
Ensembl chr 8:36,198,060...36,262,430 		JBrowse link
G GABRG2 gamma-aminobutyric acid type A receptor subunit gamma2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr16:61,441,622...61,543,375
Ensembl chr16:61,441,632...61,543,361 		JBrowse link
G GABRG3 gamma-aminobutyric acid type A receptor subunit gamma3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:139,855,461...140,464,592
Ensembl chr 1:139,857,095...140,464,579 		JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,627,709...58,634,461
Ensembl chr 2:58,627,699...58,634,450 		JBrowse link
G LGI2 leucine rich repeat LGI family member 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:18,986,549...19,017,238
Ensembl chr 8:18,986,046...19,017,431 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23358245) MGI
Ensembl		 PMID:23358245 GO_REF:0000107 NCBI chr 7:33,205,736...33,269,213
Ensembl chr 7:33,210,158...33,269,130 		JBrowse link
G NPAS4 neuronal PAS domain protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,990,936...5,995,940
Ensembl chr 2:5,990,327...5,995,929 		JBrowse link
G PLXNB1 plexin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,113,910...31,140,133
Ensembl chr13:31,113,914...31,140,220 		JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,838,062...67,117,315
Ensembl chr 9:66,838,123...67,117,315 		JBrowse link
maintenance of postsynaptic density structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF6 ADP ribosylation factor 6 involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr 1:179,697,582...179,717,299
Ensembl chr 1:179,713,299...179,717,841 		JBrowse link
G CSMD2 CUB and Sushi multiple domains 2 involved_in ISO (PMID:31068362) SynGO PMID:31068362 NCBI chr 6:89,778,338...90,424,979 JBrowse link
G DGKZ diacylglycerol kinase zeta involved_in ISO (PMID:19229292) SynGO PMID:19229292 NCBI chr 2:16,134,046...16,176,043
Ensembl chr 2:16,134,048...16,176,238 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841 		JBrowse link
G MPP2 MAGUK p55 scaffold protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr12:19,239,557...19,268,013
Ensembl chr12:19,239,668...19,268,011 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G PRICKLE2 prickle planar cell polarity protein 2 involved_in ISO (PMID:34613779) SynGO PMID:34613779 NCBI chr13:45,620,372...45,968,295
Ensembl chr13:45,620,368...45,968,152 		JBrowse link
G PSD pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr14:113,414,697...113,430,093
Ensembl chr14:113,414,264...113,429,936 		JBrowse link
G SHANK1 SH3 and multiple ankyrin repeat domains 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:55,452,095...55,496,304
Ensembl chr 6:55,451,094...55,499,031 		JBrowse link
maintenance of postsynaptic specialization structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRL3 adhesion G protein-coupled receptor L3 involved_in ISO (PMID:30792275) SynGO PMID:30792275 NCBI chr 8:59,988,280...60,800,177
Ensembl chr 8:59,987,413...60,793,857 		JBrowse link
G CADM1 cell adhesion molecule 1 involved_in ISO (PMID:21145003) SynGO PMID:21145003 NCBI chr 9:42,644,487...42,984,934
Ensembl chr 9:42,644,431...42,985,017 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in ISO PMID:21209184 SynGO PMID:21209184 RGD:13702189 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in ISO PMID:20935643 SynGO PMID:20935643 RGD:155230798 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in ISO PMID:20935643 SynGO PMID:20935643 RGD:155230798 NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,514...16,752,292 		JBrowse link
G OPHN1 oligophrenin 1 involved_in ISO PMID:24966368 SynGO PMID:24966368 RGD:13702374 NCBI chr  X:54,056,504...54,617,045
Ensembl chr  X:54,055,092...54,616,959 		JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:29,723,745...29,752,351
Ensembl chr 7:29,723,588...29,753,933 		JBrowse link
maintenance of presynaptic active zone structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSN bassoon presynaptic cytomatrix protein involved_in IEA GOC GO_REF:0000108 NCBI chr13:32,106,967...32,203,461
Ensembl chr13:32,159,630...32,195,578 		JBrowse link
G CTBP2 C-terminal binding protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr14:134,329,312...134,488,805
Ensembl chr14:134,329,941...134,487,755 		JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:68,223,722...68,608,705
Ensembl chr 5:68,223,729...68,608,703 		JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 involved_in IEA
IBA		 GOC
GO_Central		 GO_REF:0000033 GO_REF:0000108 NCBI chr13:37,388,513...38,367,512
Ensembl chr13:37,388,517...38,367,504 		JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:11359932) AgBase
MGI
Ensembl		 PMID:11359932 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:59,603,090...59,609,773
Ensembl chr 2:59,603,117...59,609,767 		JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:51,785,140...52,246,456
Ensembl chr 1:51,785,495...52,244,934 		JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:32,999,615...33,613,413
Ensembl chr 4:32,999,618...33,614,366 		JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:170,506,392...170,546,939
Ensembl chr 6:170,506,426...170,546,933 		JBrowse link
maintenance of synapse structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25611509) Ensembl
MGI		 PMID:25611509 GO_REF:0000107 NCBI chr 1:48,885,885...49,619,783
Ensembl chr 1:48,886,491...49,619,769 		JBrowse link
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,089,157...39,124,969
Ensembl chr13:39,089,077...39,129,781 		JBrowse link
G C1QL1 complement C1q like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25611509) Ensembl
MGI		 PMID:25611509 GO_REF:0000107 NCBI chr12:18,410,191...18,416,758
Ensembl chr12:18,409,992...18,417,759 		JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:35,516,097...35,518,080
Ensembl chr 6:35,515,754...35,519,517 		JBrowse link
G CBLN2 cerebellin 2 precursor involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:150,966,003...150,980,757
Ensembl chr 1:150,973,622...150,980,757 		JBrowse link
G CBLN3 cerebellin 3 precursor involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:74,865,931...74,868,443
Ensembl chr 7:74,864,114...74,868,445 		JBrowse link
G CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,921,600...49,923,529
Ensembl chr14:49,921,595...49,923,526 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:25951243), (PMID:31141683) MGI PMID:25951243 PMID:31141683 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G GRN granulin precursor involved_in ISO (PMID:29398357) SynGO PMID:29398357 NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446 		JBrowse link
G L1CAM L1 cell adhesion molecule involved_in ISO (PMID:30846310) SynGO PMID:30846310 NCBI chr  X:124,595,649...124,618,292
Ensembl chr  X:124,595,651...124,618,269 		JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,475,250...16,977,821
Ensembl chr18:16,427,673...16,973,768 		JBrowse link
G SDF4 stromal cell derived factor 4 involved_in ISO (PMID:33667157) FlyBase PMID:33667157 NCBI chr 6:63,529,853...63,539,979
Ensembl chr 6:63,529,853...63,544,944 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:24831527) SynGO PMID:24831527 NCBI chr 9:95,934,937...96,387,950
Ensembl chr 9:96,181,770...96,387,950 		JBrowse link
G SORT1 sortilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:110,721,110...110,791,406
Ensembl chr 4:110,720,947...110,789,070 		JBrowse link
modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CABP1 calcium binding protein 1 involved_in ISO (PMID:29478916) SynGO PMID:29478916 NCBI chr14:40,563,302...40,587,975
Ensembl chr14:40,563,159...40,587,970 		JBrowse link
G CAP1 cyclase associated actin cytoskeleton regulatory protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:95,811,485...95,840,576
Ensembl chr 6:95,812,179...95,840,570 		JBrowse link
G CFL1 cofilin 1 involved_in ISO PMID:16025109 SynGO PMID:16025109 RGD:13702428 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035 		JBrowse link
G CTNNA2 catenin alpha 2 involved_in ISO (PMID:15034585) SynGO PMID:15034585 NCBI chr 3:63,205,073...64,417,990
Ensembl chr 3:63,205,084...63,455,471 		JBrowse link
G CTTN cortactin involved_in ISO PMID:14684878 SynGO PMID:14684878 RGD:13702237 NCBI chr 2:3,031,103...3,060,796
Ensembl chr 2:3,031,103...3,060,813 		JBrowse link
G DIXDC1 DIX domain containing 1 involved_in ISO (PMID:27829159) SynGO PMID:27829159 NCBI chr 9:39,666,454...39,734,909 JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A involved_in ISO PMID:19890013 SynGO PMID:19890013 RGD:8553536 NCBI chr 1:129,867,261...129,877,762
Ensembl chr 1:129,867,642...129,875,639 		JBrowse link
G LOC100621521 ABI gene family member 3 involved_in ISO PMID:22485184 SynGO PMID:22485184 RGD:42721990 NCBI chr12:25,426,116...25,441,309 JBrowse link
G PFN1 profilin 1 involved_in ISO (PMID:26951674) SynGO PMID:26951674 NCBI chr12:51,962,642...51,965,570
Ensembl chr12:51,961,952...51,965,464 		JBrowse link
G PFN2 profilin 2 involved_in ISO (PMID:26951674) SynGO PMID:26951674 NCBI chr13:90,177,534...90,185,978
Ensembl chr13:90,177,540...90,183,742 		JBrowse link
G SPTB spectrin beta, erythrocytic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:88,812,717...88,954,471
Ensembl chr 7:88,812,718...88,954,306 		JBrowse link
G WASF1 WASP family member 1 involved_in ISO (PMID:16862120) SynGO PMID:16862120 NCBI chr 1:76,107,595...76,180,335 JBrowse link
G WASF3 WASP family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:4,261,121...4,366,258
Ensembl chr11:4,261,177...4,366,253 		JBrowse link
modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP44 Rho GTPase activating protein 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:57,049,900...57,206,706
Ensembl chr12:57,049,895...57,206,889 		JBrowse link
G CTTN cortactin involved_in ISO PMID:14684878 SynGO PMID:14684878 RGD:13702237 NCBI chr 2:3,031,103...3,060,796
Ensembl chr 2:3,031,103...3,060,813 		JBrowse link
G DLGAP3 DLG associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,120,406...91,184,146
Ensembl chr 6:91,120,412...91,160,214 		JBrowse link
G DLGAP4 DLG associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,626,751...39,775,927
Ensembl chr17:39,570,878...39,775,928 		JBrowse link
G DRD1 dopamine receptor D1 involved_in ISO (PMID:25258080) SynGO PMID:25258080 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,189,602...49,191,976 		JBrowse link
G FILIP1 filamin A interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:90,427,529...90,643,061
Ensembl chr 1:90,427,659...90,638,550 		JBrowse link
G RAP1B RAP1B, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,910,181...32,961,972
Ensembl chr 5:32,910,259...32,964,870 		JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in ISO PMID:21555464 SynGO PMID:21555464 RGD:405650273 NCBI chr12:44,654,364...44,676,942
Ensembl chr12:44,655,811...44,676,945 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in ISO PMID:21635779 SynGO PMID:21635779 RGD:13792519 NCBI chr17:50,804,959...50,903,155
Ensembl chr17:50,804,962...50,869,223 		JBrowse link
modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGRMC1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:97,735,402...97,743,424
Ensembl chr  X:97,735,244...97,743,423 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO PMID:22960932 UniProt PMID:22960932 RGD:14397585 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013 		JBrowse link
modification of synaptic structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP9 matrix metallopeptidase 9 involved_in ISO PMID:19047646 SynGO PMID:19047646 RGD:405650393 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788 		JBrowse link
multiple spine synapse organization, single dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,944,386...23,957,567
Ensembl chr13:23,944,369...23,957,486 		JBrowse link
negative regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G RDX radixin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,243,608...38,299,561
Ensembl chr 9:38,220,447...38,322,097 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,289,607...11,348,557
Ensembl chr17:11,289,690...11,348,549 		JBrowse link
G MIR105-1 microRNA mir-105-1 acts_upstream_of ISO (PMID:24735924) ARUK-UCL PMID:24735924 NCBI chr  X:123,628,381...123,628,461
Ensembl chr  X:123,628,381...123,628,461 		JBrowse link
G MIR105-2 microRNA mir-105-2 acts_upstream_of ISO (PMID:24735924) ARUK-UCL PMID:24735924 NCBI chr  X:123,630,499...123,630,578
Ensembl chr  X:123,630,499...123,630,578 		JBrowse link
G MIR142 microRNA mir-142 involved_in ISO (PMID:27277258) ARUK-UCL PMID:27277258 NCBI chr12:34,609,378...34,609,457
Ensembl chr12:34,609,364...34,609,468 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362 		JBrowse link
G RPS6 ribosomal protein S6 ISO RGD PMID:25217631 RGD:11041641 NCBI chr 1:203,444,360...203,447,643
Ensembl chr 1:203,444,450...203,451,468 		JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,415 		JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within ISO (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:23974706 RGD:11570553 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035 		JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581 		JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B involved_in ISO (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chr 5:58,477,862...58,948,735
Ensembl chr 5:58,480,528...58,927,558 		JBrowse link
G PRNP prion protein involved_in ISO (PMID:24012003)
(PMID:22820466)		 ARUK-UCL PMID:22820466 PMID:24012003 NCBI chr17:13,694,195...13,705,126
Ensembl chr17:13,694,190...13,705,124 		JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM3 dynamin 3 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 9:114,262,782...114,805,252
Ensembl chr 9:114,262,791...114,797,674 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISO RGD PMID:20531346 RGD:11251757 NCBI chr 7:11,602,470...11,720,156
Ensembl chr 7:11,600,795...11,720,318 		JBrowse link
G EFNA1 ephrin A1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:94,666,457...94,673,442
Ensembl chr 4:94,666,460...94,674,071 		JBrowse link
G NGEF neuronal guanine nucleotide exchange factor involved_in ISO (PMID:17143272) UniProt PMID:17143272 NCBI chr15:133,332,715...133,460,161
Ensembl chr15:133,332,718...133,460,166 		JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:57,174,506...57,204,770
Ensembl chr  X:57,176,103...57,201,461 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chr14:99,929,590...100,021,619 JBrowse link
G TWF1 twinfilin actin binding protein 1 ISO RGD PMID:33963280 RGD:596938166 NCBI chr 5:74,868,586...74,881,220
Ensembl chr 5:74,868,585...74,893,698 		JBrowse link
G UBE3A ubiquitin protein ligase E3A ISO RGD PMID:25867122 RGD:11079590 NCBI chr 1:141,887,179...142,001,595
Ensembl chr 1:141,887,227...141,995,003 		JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISO (PMID:35420982) UniProt PMID:35420982 NCBI chr 5:63,572,062...63,612,177
Ensembl chr 5:63,572,065...63,599,525 		JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 involved_in ISO
IBA		 RGD
GO_Central		 PMID:23769722 GO_REF:0000033 RGD:152975632 NCBI chr 8:132,035,170...132,200,425
Ensembl chr 8:132,035,151...132,249,411 		JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G APOD apolipoprotein D involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:132,514,546...132,562,594
Ensembl chr13:132,514,949...132,562,599 		JBrowse link
G ARHGAP6 Rho GTPase activating protein 6 involved_in ISO (PMID:10699171) BHF-UCL PMID:10699171 NCBI chr  X:7,910,851...8,441,579
Ensembl chr  X:7,910,858...8,120,386 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585 		JBrowse link
G CORO1C coronin 1C involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:42,062,468...42,145,130
Ensembl chr14:42,062,893...42,145,123 		JBrowse link
G DLC1 DLC1 Rho GTPase activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,169,709...1,637,171
Ensembl chr17:1,170,208...1,637,114 		JBrowse link
G DMTN dematin actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,315,643...6,346,722
Ensembl chr14:6,321,870...6,346,865 		JBrowse link
G DUSP22 dual specificity phosphatase 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,437...96,270
Ensembl chr 7:43,487...96,267 		JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISO (PMID:20543869) UniProt PMID:20543869 NCBI chr13:40,276,896...40,369,708 JBrowse link
G ITGB1BP1 integrin subunit beta 1 binding protein 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:126,905,779...126,921,961
Ensembl chr 3:126,905,810...126,922,045 		JBrowse link
G LRP1 LDL receptor related protein 1 ISO RGD PMID:20197276 RGD:13800550 NCBI chr 5:22,435,636...22,519,276 JBrowse link
G MMP14 matrix metallopeptidase 14 ISO RGD PMID:15044209 RGD:1582604 NCBI chr 7:76,174,502...76,185,931
Ensembl chr 7:76,172,971...76,185,928 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:147,778,420...148,025,943
Ensembl chr13:147,778,370...147,879,794 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:148,033,712...148,087,766
Ensembl chr13:148,033,704...148,087,744 		JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:9616126) UniProt PMID:9616126 NCBI chr14:99,929,590...100,021,619 JBrowse link
G RCC2 regulator of chromosome condensation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,988,271...76,014,200
Ensembl chr 6:75,988,272...76,014,160 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860 		JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,703 		JBrowse link
G LOC110258578 interleukin-1 beta-like involved_in ISO (PMID:11090614) ARUK-UCL PMID:11090614
G MIR23A microRNA mir-23a ISO RGD PMID:25798059 RGD:13592600 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186 		JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLN1 cerebellin 1 precursor involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:35,516,097...35,518,080
Ensembl chr 6:35,515,754...35,519,517 		JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTN pleiotrophin ISO RGD PMID:7722643 RGD:9834945 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,787...12,309,044 		JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFL1 cofilin 1 ISO RGD PMID:26169356 RGD:11074527 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035 		JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO (PMID:24259049) Alzheimers_University_of_Toronto PMID:24259049 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30902970) MGI
Ensembl		 PMID:30902970 GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (PMID:29643768) ARUK-UCL PMID:29643768 NCBI chr14:97,487,854...97,490,118
Ensembl chr14:97,487,226...97,490,288 		JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD9 frizzled class receptor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,753,294...10,762,812
Ensembl chr 3:10,754,783...10,757,147 		JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:60,771,567...60,944,092
Ensembl chr 1:60,771,572...60,944,038 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 ISO RGD PMID:23358245 RGD:9743980 NCBI chr 7:33,205,736...33,269,213
Ensembl chr 7:33,210,158...33,269,130 		JBrowse link
G NEGR1 neuronal growth regulator 1 ISO RGD PMID:19711485 RGD:596948412 NCBI chr 6:140,780,397...141,652,414
Ensembl chr 6:140,780,723...141,647,820 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054 		JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:27893610 RGD:243048440 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607 		JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:27893610 RGD:243048440 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,348,410...176,479,481 		JBrowse link
G TLR2 toll like receptor 2 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,993...75,428,330 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,495,409...53,506,373
Ensembl chr12:53,495,453...53,506,352 		JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,709,473...22,713,785
Ensembl chr12:22,709,609...22,713,778 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23407945) Ensembl
MGI		 PMID:23407945 GO_REF:0000107 NCBI chr 7:74,918,982...74,929,688
Ensembl chr 7:74,918,984...74,929,600 		JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGRMC1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:97,735,402...97,743,424
Ensembl chr  X:97,735,244...97,743,423 		JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569 		JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (PMID:20534458) BHF-UCL PMID:20534458 NCBI chr 9:100,846,693...102,171,199
Ensembl chr 9:100,847,013...102,170,004 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G NRXN2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chr 2:7,454,771...7,554,180
Ensembl chr 2:7,478,750...7,515,943 		JBrowse link
neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG3L2 AFG3 like matrix AAA peptidase subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2917690) Ensembl
MGI		 PMID:2917690 GO_REF:0000107 NCBI chr 6:97,200,890...97,234,577
Ensembl chr 6:97,200,922...97,235,366 		JBrowse link
G AGRN agrin involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:12165471) GO_Central
MGI		 PMID:12165471 GO_REF:0000033 NCBI chr 6:63,366,017...63,398,311
Ensembl chr 6:63,365,983...63,398,309 		JBrowse link
G ALS2 alsin Rho guanine nucleotide exchange factor ALS2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16321985) Ensembl
MGI		 PMID:16321985 GO_REF:0000107 NCBI chr15:105,328,717...105,401,152
Ensembl chr15:105,328,719...105,401,093 		JBrowse link
G ANK3 ankyrin 3 ISO RGD PMID:12657669 RGD:6767302 NCBI chr14:63,416,154...63,809,220
Ensembl chr14:63,416,161...64,194,128 		JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6692971), (PMID:6692972), (PMID:7286424) Ensembl
MGI		 PMID:6692971 PMID:6692972 PMID:7286424 GO_REF:0000107 NCBI chr10:23,503,701...23,567,797
Ensembl chr10:23,502,898...23,568,058 		JBrowse link
G CACNA2D2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17320843) Ensembl
MGI		 PMID:17320843 GO_REF:0000107 NCBI chr13:32,845,110...32,988,851
Ensembl chr13:32,845,115...32,988,774 		JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17320843) Ensembl
MGI		 PMID:17320843 GO_REF:0000107 NCBI chr15:402,801...455,691
Ensembl chr15:186,434...459,856 		JBrowse link
G CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17320843) Ensembl
MGI		 PMID:17320843 GO_REF:0000107 NCBI chr 5:11,067,016...11,185,480
Ensembl chr 5:11,067,692...11,185,480 		JBrowse link
G CDK5RAP1 CDK5 regulatory subunit associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10995443) Ensembl
MGI		 PMID:10995443 GO_REF:0000107 NCBI chr17:36,917,276...36,946,232
Ensembl chr17:36,915,953...36,946,187 		JBrowse link
G CHRNA1 cholinergic receptor nicotinic alpha 1 subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9221765) MGI
Ensembl		 PMID:9221765 GO_REF:0000107 NCBI chr15:80,673,072...80,692,256
Ensembl chr15:80,673,067...80,692,208 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17418794) Ensembl
MGI		 PMID:17418794 GO_REF:0000107 NCBI chr11:76,858,332...76,997,409
Ensembl chr11:76,858,356...76,997,322 		JBrowse link
G COL4A5 collagen type IV alpha 5 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17418794) Ensembl
MGI		 PMID:17418794 GO_REF:0000107 NCBI chr  X:88,958,837...89,183,306
Ensembl chr  X:88,958,849...89,183,372 		JBrowse link
G DCTN1 dynactin subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:68,642,562...68,673,605
Ensembl chr 3:68,643,247...68,673,604 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:37,883,233...37,919,141
Ensembl chr 3:37,883,244...37,919,324 		JBrowse link
G DOK7 docking protein 7 acts_upstream_of_or_within ISO (PMID:16794080) MGI PMID:16794080 NCBI chr 8:2,089,645...2,119,076
Ensembl chr 8:2,089,670...2,122,685 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12165471) Ensembl
MGI		 PMID:12165471 GO_REF:0000107 NCBI chr 6:63,617,787...63,628,965
Ensembl chr 6:63,617,789...63,628,913 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10655525) Ensembl
MGI		 PMID:10655525 GO_REF:0000107 NCBI chr12:22,591,621...22,621,384
Ensembl chr12:22,590,725...22,621,351 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:17418794) MGI PMID:17418794 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FNTA farnesyltransferase, CAAX box, subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,928,327...11,953,139
Ensembl chr17:11,928,358...11,951,684 		JBrowse link
G KALRN kalirin RhoGEF kinase acts_upstream_of_or_within ISO (PMID:23116210) MGI PMID:23116210 NCBI chr13:135,653,795...136,277,072 JBrowse link
G KY kyphoscoliosis peptidase involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:11136708) GO_Central
MGI		 PMID:11136708 GO_REF:0000033 NCBI chr13:75,726,031...75,774,981
Ensembl chr13:75,726,041...75,774,986 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17418794), (PMID:7885444) Ensembl
MGI		 PMID:7885444 PMID:17418794 GO_REF:0000107 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,286...31,750,833 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:23222475)
(PMID:19346129), (PMID:23222475)		 MGI PMID:19346129 PMID:23222475
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,225...71,945,828 		JBrowse link
G MUSK muscle associated receptor tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16794080)
(PMID:12165471)		 RGD
MGI
Ensembl		 PMID:7546737 PMID:12165471 PMID:16794080 GO_REF:0000107 RGD:633425 NCBI chr 1:251,650,151...251,758,538
Ensembl chr 1:251,650,710...251,756,608 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:19345204) GO_Central
MGI		 PMID:19345204 GO_REF:0000033 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,940...116,070,305 		JBrowse link
G P2RX2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17706883) Ensembl
MGI		 PMID:17706883 GO_REF:0000107 NCBI chr14:22,854,828...22,858,574
Ensembl chr14:22,854,828...22,858,386 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:12165471) MGI PMID:12165471 NCBI chr 9:11,830,095...11,973,074
Ensembl chr 9:11,830,095...12,020,415 		JBrowse link
G PDZRN3 PDZ domain containing ring finger 3 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:54,659,657...54,904,742
Ensembl chr13:54,659,589...54,904,809 		JBrowse link
G PPFIBP1 PPFIA binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:46,031,398...46,222,915
Ensembl chr 5:46,031,401...46,222,887 		JBrowse link
G PPFIBP2 PPFIA binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:1,984,717...2,141,428
Ensembl chr 9:1,987,841...2,141,398 		JBrowse link
G RER1 retention in endoplasmic reticulum sorting receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21187406) Ensembl
MGI		 PMID:21187406 GO_REF:0000107 NCBI chr 6:64,301,139...64,311,526
Ensembl chr 6:64,301,199...64,311,783 		JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28237315) Ensembl
MGI		 PMID:28237315 GO_REF:0000107 NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,902,186...127,003,397
Ensembl chr 1:126,902,186...127,003,397 		JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20962009) Ensembl
MGI		 PMID:20962009 GO_REF:0000107 NCBI chr 6:48,729,839...48,812,799
Ensembl chr 6:48,729,419...48,812,796 		JBrowse link
G TNC tenascin C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9593587) Ensembl
MGI		 PMID:9593587 GO_REF:0000107 NCBI chr 1:255,533,235...255,630,381
Ensembl chr 1:255,533,238...255,630,376 		JBrowse link
G UNC13A unc-13 homolog A acts_upstream_of_or_within ISO (PMID:15988013) MGI PMID:15988013 NCBI chr 2:60,057,926...60,130,015 JBrowse link
G UNC13B unc-13 homolog B acts_upstream_of_or_within ISO (PMID:15988013) MGI PMID:15988013 NCBI chr 1:235,918,751...236,158,098
Ensembl chr 1:235,918,747...236,158,098 		JBrowse link
G UTRN utrophin ISO RGD PMID:9604203 RGD:634446 NCBI chr 1:20,514,264...21,047,927
Ensembl chr 1:20,514,260...21,048,484 		JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,141,222...20,157,341
Ensembl chr12:20,141,641...20,157,044 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chr 9:109,740,510...111,781,144 JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:25014022) MGI PMID:25014022 NCBI chr12:58,679,773...58,734,195
Ensembl chr12:58,679,775...58,707,925 		JBrowse link
neurotransmitter-gated ion channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chr 3:66,128,650...66,884,916
Ensembl chr 3:66,128,689...66,884,740 		JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29107521) Ensembl
MGI		 PMID:29107521 GO_REF:0000107 NCBI chr13:104,443,610...104,461,850
Ensembl chr13:104,449,973...104,461,119 		JBrowse link
NMDA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 (PMID:24328732) Alzheimers_University_of_Toronto
Ensembl		 PMID:24328732 GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A ISO RGD PMID:18442977 RGD:7241017 NCBI chr16:42,479,812...42,484,365
Ensembl chr16:42,478,923...42,484,304 		JBrowse link
G NLGN1 neuroligin 1 involved_in ISO PMID:19450252 BHF-UCL PMID:19450252 RGD:8553605 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,035,854...112,725,618 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:15620359) BHF-UCL PMID:15620359 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,803,519...90,382,034 		JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:103,460,855...103,963,728
Ensembl chr 9:103,460,863...103,963,883 		JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISO (PMID:21558424) CACAO PMID:21558424 NCBI chr 5:41,376...93,033
Ensembl chr 5:41,786...93,177 		JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 ISO RGD PMID:16687515 RGD:1599119 NCBI chr 8:109,306,793...109,661,970
Ensembl chr 8:109,306,797...109,912,908 		JBrowse link
G CD9 CD9 molecule involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:64,420,177...64,459,783
Ensembl chr 5:64,420,182...64,460,304 		JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,141,222...20,157,341
Ensembl chr12:20,141,641...20,157,044 		JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO (PMID:21966409) BHF-UCL PMID:21966409 NCBI chr 6:101,420,376...101,671,177
Ensembl chr 6:101,420,396...101,671,169 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19270340) Ensembl
MGI		 PMID:19270340 GO_REF:0000107 NCBI chr14:59,203,519...59,240,303
Ensembl chr14:59,203,090...59,241,247 		JBrowse link
G NFASC neurofascin acts_upstream_of_or_within
involved_in		 ISO (PMID:20371806)
(PMID:19185024)
(PMID:16337912)		 MGI
UniProt		 PMID:16337912 PMID:19185024 PMID:20371806 NCBI chr 9:65,502,565...65,715,612
Ensembl chr 9:65,502,259...65,713,518 		JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:16436605) MGI PMID:16436605 NCBI chr12:58,679,773...58,734,195
Ensembl chr12:58,679,775...58,707,925 		JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:108,233,134...108,315,284
Ensembl chr 8:108,233,143...108,314,921 		JBrowse link
paranodal junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,141,222...20,157,341
Ensembl chr12:20,141,641...20,157,044 		JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO (PMID:21632923) MGI PMID:21632923 NCBI chr 6:101,420,376...101,671,177
Ensembl chr 6:101,420,396...101,671,169 		JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:255,009,765...255,095,281
Ensembl chr 1:255,009,771...255,095,222 		JBrowse link
positive regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADD1 adducin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:1,627,146...1,710,653
Ensembl chr 8:1,627,062...1,710,650 		JBrowse link
G PTPN23 protein tyrosine phosphatase non-receptor type 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:30,190,659...30,252,980
Ensembl chr13:30,190,755...30,253,113 		JBrowse link
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLG4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr12:52,550,138...52,574,021
Ensembl chr12:52,550,141...52,575,143 		JBrowse link
G GRIP2 glutamate receptor interacting protein 2 involved_in ISO PMID:20083202 UniProt PMID:20083202 RGD:4107359 NCBI chr13:69,949,608...70,088,719
Ensembl chr13:69,988,459...70,088,718 		JBrowse link
G SNX27 sorting nexin 27 ISO RGD PMID:25071192 RGD:13508620 NCBI chr 4:97,533,643...97,620,816
Ensembl chr 4:97,525,181...97,620,788 		JBrowse link
G SSH1 slingshot protein phosphatase 1 ISO RGD PMID:20442266 RGD:11535133 NCBI chr14:41,963,946...42,030,842
Ensembl chr14:41,968,466...42,025,726 		JBrowse link
G ZDHHC2 zinc finger DHHC-type palmitoyltransferase 2 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr17:4,855,129...4,928,109
Ensembl chr17:4,855,345...4,928,664 		JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:22684624 RGD:11341733 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CLDN5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,042...51,163,482 		JBrowse link
G DSG3 desmoglein 3 involved_in ISO (PMID:22796473) UniProt PMID:22796473 NCBI chr 6:115,352,005...115,383,750
Ensembl chr 6:115,351,925...115,383,743 		JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,251,465...75,279,364
Ensembl chr 6:75,251,467...75,279,314 		JBrowse link
G GCG glucagon involved_in IDA (PMID:25050009) AgBase PMID:25050009 NCBI chr15:68,800,557...68,810,268
Ensembl chr15:68,800,560...68,810,242 		JBrowse link
G GDF2 growth differentiation factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,399...88,513,375 		JBrowse link
G IL17A interleukin 17A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:46,013,584...46,017,161
Ensembl chr 7:46,013,584...46,017,153 		JBrowse link
G NPHP1 nephrocystin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,316,864...46,378,279
Ensembl chr 3:46,316,875...46,377,273 		JBrowse link
G NPHP4 nephrocystin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:66,815,282...66,928,245
Ensembl chr 6:66,815,281...66,928,146 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,780...4,803,543 		JBrowse link
positive regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN19 claudin 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,695,246...168,699,683
Ensembl chr 6:168,695,246...168,699,924 		JBrowse link
G CRB3 crumbs cell polarity complex component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,618,059...72,623,266
Ensembl chr 2:72,618,105...72,623,344 		JBrowse link
G FLOT1 flotillin 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,252,326...23,265,145 		JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24328732) Alzheimers_University_of_Toronto
Ensembl		 PMID:24328732 GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:30206770 RGD:405650589 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565 		JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO PMID:17360908 ARUK-UCL PMID:17360908 RGD:12793018
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841 		JBrowse link
G NEDD9 neural precursor cell expressed, developmentally down-regulated 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:7,807,042...8,093,553
Ensembl chr 7:7,807,044...7,914,061 		JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chr17:49,258,543...49,390,418
Ensembl chr17:49,258,542...49,390,399 		JBrowse link
G ZNF804A zinc finger protein 804A involved_in ISO PMID:27837918 UniProt PMID:27837918 RGD:13210564 NCBI chr15:89,842,424...90,150,352
Ensembl chr15:89,842,769...90,150,347 		JBrowse link
positive regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 ISO RGD PMID:23441206 RGD:11530033 NCBI chr 3:76,691,275...76,729,269
Ensembl chr 3:76,691,280...76,729,252 		JBrowse link
G ACTR3 actin related protein 3 ISO RGD PMID:23441206 RGD:11530033 NCBI chr15:20,104,808...20,171,721
Ensembl chr15:20,104,812...20,167,421 		JBrowse link
G AFDN afadin, adherens junction formation factor ISO RGD PMID:22948147 RGD:13838731 NCBI chr 1:1,569,652...1,698,475
Ensembl chr 1:1,570,272...1,698,694 		JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chr12:1,609,420...1,666,965
Ensembl chr12:1,603,540...1,670,075 		JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta involved_in ISO PMID:12873385 UniProt PMID:12873385 RGD:8553829 NCBI chr18:50,862,225...50,956,263
Ensembl chr18:50,861,466...50,956,225 		JBrowse link
G CAPRIN1 cell cycle associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:26,830,987...26,875,425
Ensembl chr 2:26,830,267...26,875,357 		JBrowse link
G CAPRIN2 caprin family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:43,042,910...43,087,644
Ensembl chr 5:43,044,266...43,087,748 		JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase ISO RGD PMID:18606847 RGD:11576294 NCBI chr  X:37,166,973...37,535,723
Ensembl chr  X:37,167,577...37,536,160 		JBrowse link
G CUX2 cut like homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,311,781...32,587,194
Ensembl chr14:32,311,188...32,587,203 		JBrowse link
G DBN1 drebrin 1 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:19174472 GO_REF:0000033 GO_REF:0000107 RGD:10398809 NCBI chr 2:80,480,603...80,495,797
Ensembl chr 2:80,479,460...80,495,796 		JBrowse link
G DBNL drebrin like involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:48,713,335...48,725,692
Ensembl chr18:48,713,340...48,725,697 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO PMID:23651854 UniProt PMID:23651854 RGD:13792545 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,794...94,350,308 		JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:20427644 RGD:10401235 NCBI chr 3:23,887,120...23,980,231
Ensembl chr 3:23,887,125...23,956,373 		JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:21364901 RGD:127285794 NCBI chr 6:80,649,098...80,849,979
Ensembl chr 6:80,650,740...80,843,567 		JBrowse link
G FGD4 FYVE, RhoGEF and PH domain containing 4 ISO RGD PMID:19605646 RGD:7800727 NCBI chr 5:41,571,054...41,636,058
Ensembl chr 5:41,570,282...41,636,028 		JBrowse link
G GPRASP3 G protein-coupled receptor associated sorting protein family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:83,895,554...83,911,573 JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (PMID:21940441) BHF-UCL PMID:21940441 NCBI chr  X:24,408,092...25,811,129
Ensembl chr  X:24,409,327...25,806,680 		JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A acts_upstream_of_or_within ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chr 1:129,867,261...129,877,762
Ensembl chr 1:129,867,642...129,875,639 		JBrowse link
G KALRN kalirin RhoGEF kinase acts_upstream_of_or_within ISO (PMID:19625617) MGI PMID:19625617 NCBI chr13:135,653,795...136,277,072 JBrowse link
G LRP8 LDL receptor related protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:158,905,464...158,984,743
Ensembl chr 6:158,905,410...158,983,382 		JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate ISO RGD PMID:16202710 RGD:9685333 NCBI chr 1:79,789,796...79,795,895
Ensembl chr 1:79,789,815...79,795,760 		JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:19605646 RGD:7800727 NCBI chr13:117,404,637...117,441,750
Ensembl chr13:117,404,699...117,442,481 		JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:19605646 RGD:7800727 NCBI chr 6:72,026,512...72,056,439
Ensembl chr 6:72,028,499...72,056,438 		JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:19605646 RGD:7800727 NCBI chr13:130,624,771...130,718,345
Ensembl chr13:130,624,796...130,719,083 		JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834 		JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 ISO RGD PMID:18481281 RGD:7775053 NCBI chr  X:90,941,976...91,244,331
Ensembl chr  X:90,942,077...91,238,565 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:211,832,409...214,013,013
Ensembl chr 1:213,483,348...214,009,893 		JBrowse link
G RELN reelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:103,460,855...103,963,728
Ensembl chr 9:103,460,863...103,963,883 		JBrowse link
G SLC30A1 solute carrier family 30 member 1 ISO RGD PMID:25319628 RGD:11057402 NCBI chr 9:131,633,586...131,636,934
Ensembl chr 9:131,633,585...131,640,672 		JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:16418534 RGD:10043163 NCBI chr 4:62,139,456...62,455,509
Ensembl chr 4:62,139,464...62,455,499 		JBrowse link
G TIAM1 TIAM Rac1 associated GEF 1 ISO RGD PMID:16474385 RGD:10043325 NCBI chr13:194,774,495...195,235,750
Ensembl chr13:194,774,497...195,005,089 		JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEMA4A semaphorin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:93,865,054...93,892,995
Ensembl chr 4:93,865,057...93,886,371 		JBrowse link
G VSTM5 V-set and transmembrane domain containing 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:26,221,065...26,245,848
Ensembl chr 9:26,221,073...26,245,395 		JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,454 		JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:24093776 RGD:11570550 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035 		JBrowse link
G COL16A1 collagen type XVI alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,177,798...88,243,718
Ensembl chr 6:88,177,816...88,242,747 		JBrowse link
G ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:22139091 RGD:9685417 NCBI chr 4:19,319,815...19,433,492
Ensembl chr 4:19,319,810...19,433,488 		JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chr15:31,159,214...31,295,891
Ensembl chr15:31,159,223...31,295,893 		JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:182,519,681...182,606,890
Ensembl chr 1:182,519,684...182,606,869 		JBrowse link
G FMN1 formin 1 acts_upstream_of_or_within ISO (PMID:18560567) MGI PMID:18560567 NCBI chr 1:136,696,353...137,163,532
Ensembl chr 1:136,704,090...137,163,537 		JBrowse link
G HRG histidine rich glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:124,505,305...124,516,387
Ensembl chr13:124,505,312...124,516,705 		JBrowse link
G ITGB1BP1 integrin subunit beta 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,905,779...126,921,961
Ensembl chr 3:126,905,810...126,922,045 		JBrowse link
G KDR kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G LIMS1 LIM zinc finger domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:47,607,737...47,704,921
Ensembl chr 3:47,606,230...47,672,884 		JBrowse link
G MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (PMID:25490267) ARUK-UCL PMID:25490267 NCBI chr 3:52,483,028...52,649,480
Ensembl chr 3:52,484,274...52,649,410 		JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:21598299 RGD:12798522 NCBI chr 5:11,365,603...11,456,475
Ensembl chr 5:11,360,660...11,456,472 		JBrowse link
G MYOC myocilin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:114,087,370...114,098,765
Ensembl chr 9:114,087,378...114,098,745 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 ISO RGD PMID:30354218 RGD:124713558 NCBI chr12:44,626,447...44,636,302
Ensembl chr12:44,625,604...44,636,289 		JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:50,040,612...50,083,047
Ensembl chr14:50,040,663...50,063,325 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 ISO RGD PMID:16905534 RGD:39456088 NCBI chr14:39,202,165...39,292,041
Ensembl chr14:39,202,169...39,292,003 		JBrowse link
G PTPRJ protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:14,548,489...14,724,823
Ensembl chr 2:14,548,428...14,724,474 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,780...4,803,543 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944 		JBrowse link
G S100A10 S100 calcium binding protein A10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:97,261,752...97,272,517
Ensembl chr 4:97,261,815...97,272,513 		JBrowse link
G SDC4 syndecan 4 ISO RGD PMID:10504291 RGD:2312327