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ONTOLOGY REPORT - ANNOTATIONS


Term:cell junction organization
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Accession:GO:0034330 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.
Synonyms:exact_synonym: cell junction assembly and maintenance;   cell junction organisation
 related_synonym: cell junction biogenesis



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adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Dsg3 desmoglein 3 involved_in ISO (PMID:31835537) UniProt PMID:31835537 NCBI chr18:20,643,331...20,674,367
Ensembl chr18:20,643,331...20,680,516
JBrowse link
G Fer FER tyrosine kinase involved_in ISO
IEA
RGD
Ensembl
PMID:12700184 GO_REF:0000107 RGD:2291909 NCBI chr17:64,136,945...64,453,515
Ensembl chr17:64,170,057...64,446,491
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IMP (PMID:23565059) CACAO PMID:23565059 NCBI chr 3:103,647,131...103,699,210
Ensembl chr 3:103,647,131...103,698,879
JBrowse link
G Jam3 junction adhesion molecule 3 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 9:27,008,680...27,066,739
Ensembl chr 9:27,008,680...27,066,717
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr16:31,835,108...31,898,160
Ensembl chr16:31,835,108...31,898,160
JBrowse link
G Ramp2 receptor (calcitonin) activity modifying protein 2 involved_in IMP
ISO
(PMID:18097473) UniProt
GO_Central
PMID:18097473 GO_REF:0000119 NCBI chr11:101,137,160...101,139,076
Ensembl chr11:101,136,854...101,150,372
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006
JBrowse link
G Tbcd tubulin-specific chaperone d involved_in IBA
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 NCBI chr11:121,342,817...121,507,996
Ensembl chr11:121,342,775...121,507,990
JBrowse link
G Vcl vinculin involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr14:20,979,436...21,083,744
Ensembl chr14:20,979,466...21,083,744
JBrowse link
G Zfp703 zinc finger protein 703 involved_in IDA (PMID:21317240) UniProt PMID:21317240 NCBI chr 8:27,467,364...27,471,490
Ensembl chr 8:27,467,353...27,471,489
JBrowse link
adherens junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fer FER tyrosine kinase involved_in ISO
IEA
RGD
Ensembl
PMID:12700184 GO_REF:0000107 RGD:2291909 NCBI chr17:64,136,945...64,453,515
Ensembl chr17:64,170,057...64,446,491
JBrowse link
adherens junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within IMP (PMID:25100583) MGI PMID:25100583 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412
JBrowse link
G Fermt2 fermitin family member 2 involved_in IMP
ISO
(PMID:28799653) ARUK-UCL
GO_Central
PMID:28799653 GO_REF:0000119 NCBI chr14:45,696,252...45,767,767
Ensembl chr14:45,696,252...45,767,575
JBrowse link
G Inava innate immunity activator involved_in IBA
ISO
IDA
(PMID:29420262) GO_Central
UniProt
PMID:29420262 GO_REF:0000033 GO_REF:0000119 NCBI chr 1:136,141,259...136,162,045
Ensembl chr 1:136,141,269...136,162,002
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:21406566) MGI
GO_Central
PMID:21406566 GO_REF:0000033 NCBI chr15:58,813,083...58,955,805
Ensembl chr15:58,813,083...58,953,854
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO RGD
GO_Central
PMID:18261826 GO_REF:0000096 RGD:6784508 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529
JBrowse link
adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 a disintegrin and metallopeptidase domain 10 involved_in IMP (PMID:30639848) ARUK-UCL PMID:30639848 NCBI chr 9:70,586,133...70,687,511
Ensembl chr 9:70,586,279...70,687,511
JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within IMP (PMID:16892058) MGI PMID:16892058 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031
JBrowse link
G Cdh1 cadherin 1 involved_in ISO
IBA
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878
JBrowse link
G Cdh10 cadherin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:18,818,763...19,014,883
Ensembl chr15:18,819,033...19,014,322
JBrowse link
G Cdh11 cadherin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:103,358,727...103,512,125
Ensembl chr 8:103,358,727...103,512,274
JBrowse link
G Cdh12 cadherin 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:20,448,967...21,598,668
Ensembl chr15:20,449,351...21,589,619
JBrowse link
G Cdh13 cadherin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:119,010,150...120,051,668
Ensembl chr 8:119,010,472...120,051,660
JBrowse link
G Cdh15 cadherin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:123,575,113...123,594,136
Ensembl chr 8:123,574,705...123,594,136
JBrowse link
G Cdh17 cadherin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:11,758,157...11,817,905
Ensembl chr 4:11,758,147...11,817,895
JBrowse link
G Cdh18 cadherin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:22,548,984...23,477,577
Ensembl chr15:22,549,108...23,474,504
JBrowse link
G Cdh19 cadherin 19, type 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:110,811,802...110,905,331
Ensembl chr 1:110,816,056...110,905,314
JBrowse link
G Cdh2 cadherin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303
JBrowse link
G Cdh20 cadherin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:104,696,245...104,923,202
Ensembl chr 1:104,696,254...104,923,206
JBrowse link
G Cdh22 cadherin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:164,953,421...165,076,892
Ensembl chr 2:164,953,427...165,076,773
JBrowse link
G Cdh24 cadherin-like 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:54,868,688...54,878,853
Ensembl chr14:54,868,688...54,878,821
JBrowse link
G Cdh26 cadherin-like 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:178,072,263...178,129,159
Ensembl chr 2:178,072,324...178,129,159
JBrowse link
G Cdh3 cadherin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:107,237,484...107,283,543
Ensembl chr 8:107,237,523...107,283,929
JBrowse link
G Cdh4 cadherin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:179,084,228...179,541,166
Ensembl chr 2:179,084,224...179,541,166
JBrowse link
G Cdh5 cadherin 5 involved_in IEA
IBA
ISO
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:104,828,247...104,871,136
Ensembl chr 8:104,828,257...104,871,143
JBrowse link
G Cdh6 cadherin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:13,028,785...13,176,493
Ensembl chr15:13,028,787...13,173,761
JBrowse link
G Cdh7 cadherin 7, type 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:109,909,967...110,073,002
Ensembl chr 1:109,910,161...110,067,887
JBrowse link
G Cdh8 cadherin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:99,751,103...100,144,298
Ensembl chr 8:99,751,103...100,143,103
JBrowse link
G Cdh9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:16,728,641...16,857,224
Ensembl chr15:16,728,842...16,857,180
JBrowse link
G Cdhr18 cadherin related family member 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:8,555,242...8,646,046
Ensembl chr14:8,555,285...8,655,145
JBrowse link
G Csk c-src tyrosine kinase involved_in ISO
IEA
IBA
RGD
Ensembl
GO_Central
PMID:15389520 GO_REF:0000033 GO_REF:0000107 RGD:5134367 NCBI chr 9:57,533,929...57,560,758
Ensembl chr 9:57,533,929...57,560,914
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:19129494) MGI PMID:19129494 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Dsp desmoplakin acts_upstream_of_or_within IMP (PMID:11781569) MGI PMID:11781569 NCBI chr13:38,335,357...38,382,553
Ensembl chr13:38,335,270...38,382,553
JBrowse link
G Efnb2 ephrin B2 involved_in IDA (PMID:30639848) ARUK-UCL PMID:30639848 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242
JBrowse link
G Epha4 Eph receptor A4 involved_in IMP (PMID:30639848) ARUK-UCL PMID:30639848 NCBI chr 1:77,343,819...77,491,763
Ensembl chr 1:77,343,822...77,491,725
JBrowse link
G Numb NUMB endocytic adaptor protein acts_upstream_of_or_within IGI (PMID:17589506) MGI PMID:17589506 NCBI chr12:83,840,808...83,968,708
Ensembl chr12:83,840,808...83,968,708
JBrowse link
G Numbl numb-like acts_upstream_of_or_within IGI (PMID:17589506) MGI PMID:17589506 NCBI chr 7:26,957,884...26,981,570
Ensembl chr 7:26,957,858...26,981,569
JBrowse link
G Plec plectin involved_in IMP (PMID:26519478) MGI PMID:26519478 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like acts_upstream_of_or_within IMP (PMID:26787558) MGI PMID:26787558 NCBI chr10:75,047,872...75,148,234
Ensembl chr10:75,047,905...75,148,577
JBrowse link
G Src Rous sarcoma oncogene involved_in ISO
IEA
RGD
Ensembl
PMID:15389520 GO_REF:0000107 RGD:5134367 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within_positive_effect ISO GO_Central GO_REF:0000119 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Chrdl1 chordin-like 1 involved_in IMP (PMID:30344043) MGI PMID:30344043 NCBI chr  X:142,068,670...142,177,282
Ensembl chr  X:142,068,670...142,177,258
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IBA
ISS
ISO
GO_Central
BHF-UCL
GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within IMP (PMID:23911104) MGI PMID:23911104 NCBI chr 6:79,995,828...80,787,143
Ensembl chr 6:79,995,860...80,787,124
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IMP
IDA
(PMID:21940442)
(PMID:12796785)
GO_Central
CACAO
BHF-UCL
PMID:12796785 PMID:21940442 GO_REF:0000096 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (PMID:21558424), (PMID:21795692) CACAO PMID:21558424 PMID:21795692 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464
JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within IMP (PMID:15883201) MGI PMID:15883201 NCBI chr 4:119,112,638...119,119,635
Ensembl chr 4:119,112,611...119,119,635
JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within IMP (PMID:22411810)
(PMID:16543460)
MGI PMID:16543460 PMID:22411810 NCBI chr18:35,251,955...35,387,829
Ensembl chr18:35,251,912...35,387,832
JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr11:116,033,111...116,059,097
Ensembl chr11:116,033,111...116,058,992
JBrowse link
G Pkn2 protein kinase N2 involved_in ISO
IDA
(PMID:20974804) GO_Central
UniProt
PMID:20974804 GO_REF:0000119 NCBI chr 3:142,496,663...142,587,765
Ensembl chr 3:142,496,663...142,587,765
JBrowse link
G Prkcz2 protein kinase C, zeta 2 acts_upstream_of_or_within IMP (PMID:14685273) MGI PMID:14685273 NCBI chr 7:27,581,824...27,584,046
Ensembl chr 7:27,582,180...27,583,935
JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IDA
(PMID:20974804) GO_Central
UniProt
PMID:20974804 GO_REF:0000119 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133
JBrowse link
G Rhoc ras homolog family member C involved_in ISO
IDA
(PMID:20974804) GO_Central
UniProt
PMID:20974804 GO_REF:0000119 NCBI chr 3:104,696,350...104,701,775
Ensembl chr 3:104,695,691...104,701,775
JBrowse link
G Vcl vinculin involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr14:20,979,436...21,083,744
Ensembl chr14:20,979,466...21,083,744
JBrowse link
G Wdr1 WD repeat domain 1 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 5:38,684,149...38,720,265
Ensembl chr 5:38,684,156...38,720,564
JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in IMP (PMID:18332111) UniProt PMID:18332111 NCBI chr 7:28,592,673...28,661,799
Ensembl chr 7:28,592,673...28,661,765
JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO GO_Central GO_REF:0000119 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in IMP (PMID:17403930) UniProt PMID:17403930 NCBI chr11:69,047,898...69,060,617
Ensembl chr11:69,047,815...69,060,618
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 NOT|involved_in IMP (PMID:22832496) UniProt PMID:22832496 NCBI chr11:69,016,243...69,039,941
Ensembl chr11:69,016,722...69,039,941
JBrowse link
G Arl2 ADP-ribosylation factor-like 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:6,184,419...6,191,167
Ensembl chr19:6,184,404...6,191,578
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within IMP (PMID:15775979) MGI PMID:15775979 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878
JBrowse link
G Cdh5 cadherin 5 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 8:104,828,247...104,871,136
Ensembl chr 8:104,828,257...104,871,143
JBrowse link
G Cgn cingulin acts_upstream_of_or_within IMP (PMID:24385485) MGI PMID:24385485 NCBI chr 3:94,667,376...94,695,036
Ensembl chr 3:94,667,376...94,693,826
JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr16:26,175,395...26,190,589
Ensembl chr16:26,175,392...26,190,591
JBrowse link
G Cldn10 claudin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:119,025,283...119,111,937
Ensembl chr14:119,025,320...119,112,901
JBrowse link
G Cldn11 claudin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:31,204,069...31,218,475
Ensembl chr 3:31,204,069...31,218,473
JBrowse link
G Cldn13 claudin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:134,943,104...134,944,384
Ensembl chr 5:134,943,103...134,944,380
JBrowse link
G Cldn14 claudin 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:93,715,919...93,809,733
Ensembl chr16:93,715,919...93,809,696
JBrowse link
G Cldn15 claudin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:136,996,723...137,004,699
Ensembl chr 5:136,995,470...137,004,712
JBrowse link
G Cldn16 claudin 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:26,281,885...26,301,515
Ensembl chr16:26,281,885...26,301,515
JBrowse link
G Cldn17 claudin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:88,302,695...88,303,866
Ensembl chr16:88,302,695...88,303,866
JBrowse link
G Cldn18 claudin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Cldn19 claudin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:119,112,638...119,119,635
Ensembl chr 4:119,112,611...119,119,635
JBrowse link
G Cldn2 claudin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:138,701,552...138,712,135
Ensembl chr  X:138,701,577...138,712,135
JBrowse link
G Cldn22 claudin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:48,277,501...48,278,511
Ensembl chr 8:48,277,517...48,278,511
JBrowse link
G Cldn23 claudin 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:36,291,863...36,293,713
Ensembl chr 8:36,291,866...36,293,713
JBrowse link
G Cldn24 claudin 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:48,275,178...48,275,840
Ensembl chr 8:48,275,178...48,275,840
JBrowse link
G Cldn3 claudin 3 involved_in ISO
IBA
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326
JBrowse link
G Cldn34a claudin 34A involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:151,320,524...151,347,194
Ensembl chr  X:151,320,497...151,347,193
JBrowse link
G Cldn34b1 claudin 34B1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:153,669,798...153,696,639
Ensembl chr  X:153,669,801...153,673,263
JBrowse link
G Cldn34b2 claudin 34B2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:153,907,913...153,930,845
Ensembl chr  X:153,907,913...153,911,408
JBrowse link
G Cldn34b3 claudin 34B3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:75,307,912...75,311,279
Ensembl chr  X:75,307,910...75,311,344
JBrowse link
G Cldn34b4 claudin 34B4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:75,428,929...75,441,585
Ensembl chr  X:75,428,942...75,441,586
JBrowse link
G Cldn34c1 claudin 34C1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:122,013,220...122,055,351
Ensembl chr  X:122,013,192...122,098,492
JBrowse link
G Cldn34c2 claudin 34C2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:122,485,983...122,514,726
Ensembl chr  X:122,485,984...122,514,222
JBrowse link
G Cldn34c3 claudin 34C3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:122,697,896...122,732,846
Ensembl chr  X:122,697,889...122,724,117
JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:126,628,798...126,644,177
Ensembl chr  X:126,628,805...126,644,177
JBrowse link
G Cldn34c5 claudin 34C5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:122,925,702...122,954,053
Ensembl chr  X:122,925,695...122,953,536
JBrowse link
G Cldn34c6 claudin 34C6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:122,256,469...122,288,415
Ensembl chr  X:122,256,462...122,290,773
JBrowse link
G Cldn34d claudin 34D involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:75,626,216...75,646,530
Ensembl chr  X:75,626,214...75,646,530
JBrowse link
G Cldn4 claudin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:134,973,977...134,975,788
Ensembl chr 5:134,973,973...134,975,788
JBrowse link
G Cldn5 claudin 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:18,595,597...18,597,012
Ensembl chr16:18,595,597...18,597,012
JBrowse link
G Cldn6 claudin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:23,898,345...23,901,417
Ensembl chr17:23,898,223...23,901,420
JBrowse link
G Cldn7 claudin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:69,855,605...69,858,712
Ensembl chr11:69,855,605...69,858,711
JBrowse link
G Cldn8 claudin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:88,357,714...88,360,071
Ensembl chr16:88,357,716...88,360,071
JBrowse link
G Cldn9 claudin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:23,901,558...23,903,000
Ensembl chr17:23,901,558...23,903,000
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947
JBrowse link
G Ect2 ect2 oncogene involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 3:27,151,371...27,207,971
Ensembl chr 3:27,151,371...27,208,027
JBrowse link
G Esam endothelial cell-specific adhesion molecule involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 9:37,439,385...37,449,615
Ensembl chr 9:37,439,374...37,449,615
JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in IBA
ISO
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr14:33,193,475...33,297,226
Ensembl chr14:33,193,653...33,297,226
JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) involved_in ISO RGD
GO_Central
PMID:18579774 GO_REF:0000096 RGD:2325293 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Marveld2 MARVEL (membrane-associating) domain containing 2 involved_in IBA
ISO
IEA
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr13:100,732,465...100,753,479
Ensembl chr13:100,732,465...100,753,479
JBrowse link
G Marveld3 MARVEL (membrane-associating) domain containing 3 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 8:110,674,541...110,688,837
Ensembl chr 8:110,674,546...110,688,835
JBrowse link
G Micall2 MICAL-like 2 involved_in IMP (PMID:18094055) UniProt PMID:18094055 NCBI chr 5:139,692,447...139,722,088
Ensembl chr 5:139,692,451...139,722,091
JBrowse link
G Mpp7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) involved_in ISO
ISS
GO_Central
BHF-UCL
GO_REF:0000024 GO_REF:0000119 NCBI chr18:7,347,962...7,627,017
Ensembl chr18:7,347,959...7,626,866
JBrowse link
G Mtdh metadherin ISO RGD PMID:15383321 RGD:1359738 NCBI chr15:34,082,613...34,143,683
Ensembl chr15:34,082,840...34,145,770
JBrowse link
G Ocel1 occludin/ELL domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:71,823,942...71,826,333
Ensembl chr 8:71,823,942...71,832,005
JBrowse link
G Ocln occludin involved_in IBA
IEA
ISO
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr13:100,633,012...100,689,226
Ensembl chr13:100,633,015...100,689,226
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr16:31,835,108...31,898,160
Ensembl chr16:31,835,108...31,898,160
JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000096 NCBI chr 8:127,790,131...128,338,767
Ensembl chr 8:127,790,643...128,338,767
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in IMP (PMID:27336173) UniProt PMID:27336173 NCBI chr 9:113,480,812...113,537,457
Ensembl chr 9:113,480,812...113,537,327
JBrowse link
G Pecam1 platelet/endothelial cell adhesion molecule 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:106,545,039...106,606,107
Ensembl chr11:106,545,043...106,641,454
JBrowse link
G Pof1b premature ovarian failure 1B involved_in IBA
IEA
ISO
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr  X:111,548,124...111,608,408
Ensembl chr  X:111,548,128...111,608,348
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 3:90,121,022...90,133,694
Ensembl chr 3:90,121,002...90,133,692
JBrowse link
G Ramp2 receptor (calcitonin) activity modifying protein 2 involved_in IMP
ISO
(PMID:18097473) UniProt
GO_Central
PMID:18097473 GO_REF:0000119 NCBI chr11:101,137,160...101,139,076
Ensembl chr11:101,136,854...101,150,372
JBrowse link
G Samt1b spermatogenesis associated multipass transmembrane protein 1b involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:152,805,776...152,816,826
Ensembl chr  X:152,805,776...152,815,447
JBrowse link
G Samt1d spermatogenesis associated multipass transmembrane protein 1d involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:152,892,629...152,903,681
Ensembl chr  X:152,892,629...152,903,681
JBrowse link
G Samt2 spermatogenesis associated multipass transmembrane protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:153,358,224...153,362,326
Ensembl chr  X:153,358,224...153,362,356
JBrowse link
G Samt2b spermatogenesis associated multipass transmembrane protein 2b involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:153,122,221...153,126,388
Ensembl chr  X:153,122,221...153,126,388
JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:85,087,805...85,090,919
Ensembl chr  X:85,087,805...85,090,919
JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:153,264,998...153,267,678
Ensembl chr  X:153,264,998...153,267,678
JBrowse link
G Slc39a9 solute carrier family 39 (zinc transporter), member 9 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr12:80,690,657...80,730,116
Ensembl chr12:80,690,657...80,730,116
JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:20047077) MGI PMID:20047077 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101
JBrowse link
G Tbcd tubulin-specific chaperone d involved_in IBA
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 NCBI chr11:121,342,817...121,507,996
Ensembl chr11:121,342,775...121,507,990
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529
JBrowse link
G Wnt11 wingless-type MMTV integration site family, member 11 acts_upstream_of_or_within IMP (PMID:17767158) MGI PMID:17767158 NCBI chr 7:98,484,293...98,503,954
Ensembl chr 7:98,484,319...98,504,402
JBrowse link
cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 3:104,730,097...104,771,821
Ensembl chr 3:104,730,095...104,771,821
JBrowse link
G Capza1b capping actin protein of muscle Z-line subunit alpha 1B involved_in ISO GO_Central GO_REF:0000119 NCBI chr  X:168,559,374...168,562,631
Ensembl chr  X:168,559,253...168,562,631
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031
JBrowse link
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 4:119,112,638...119,119,635
Ensembl chr 4:119,112,611...119,119,635
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326
JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813
JBrowse link
G Myo9a myosin IXa involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 9:59,658,128...59,836,149
Ensembl chr 9:59,658,179...59,836,149
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr  X:97,597,886...97,934,691
Ensembl chr  X:97,597,883...97,934,631
JBrowse link
G Rhoa ras homolog family member A involved_in ISO GO_Central GO_REF:0000119 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr15:78,783,994...78,796,247
Ensembl chr15:78,783,968...78,796,251
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr11:86,474,684...86,574,662
Ensembl chr11:86,474,691...86,574,662
JBrowse link
cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 involved_in IMP (PMID:12734665) ARUK-UCL PMID:12734665 NCBI chr16:26,175,395...26,190,589
Ensembl chr16:26,175,392...26,190,591
JBrowse link
G Cldn3 claudin 3 involved_in IMP (PMID:12734665) ARUK-UCL PMID:12734665 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326
JBrowse link
cell-cell adhesion involved in synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in NAS (PMID:16242404) ComplexPortal PMID:16242404 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
G Nrxn1 neurexin I involved_in NAS (PMID:16242404) ComplexPortal PMID:16242404 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878
JBrowse link
G Cdh10 cadherin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:18,818,763...19,014,883
Ensembl chr15:18,819,033...19,014,322
JBrowse link
G Cdh11 cadherin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:103,358,727...103,512,125
Ensembl chr 8:103,358,727...103,512,274
JBrowse link
G Cdh12 cadherin 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:20,448,967...21,598,668
Ensembl chr15:20,449,351...21,589,619
JBrowse link
G Cdh13 cadherin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:119,010,150...120,051,668
Ensembl chr 8:119,010,472...120,051,660
JBrowse link
G Cdh15 cadherin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:123,575,113...123,594,136
Ensembl chr 8:123,574,705...123,594,136
JBrowse link
G Cdh17 cadherin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:11,758,157...11,817,905
Ensembl chr 4:11,758,147...11,817,895
JBrowse link
G Cdh18 cadherin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:22,548,984...23,477,577
Ensembl chr15:22,549,108...23,474,504
JBrowse link
G Cdh19 cadherin 19, type 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:110,811,802...110,905,331
Ensembl chr 1:110,816,056...110,905,314
JBrowse link
G Cdh2 cadherin 2 involved_in IMP
IBA
(PMID:26750727) UniProt
GO_Central
PMID:26750727 GO_REF:0000033 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303
JBrowse link
G Cdh20 cadherin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:104,696,245...104,923,202
Ensembl chr 1:104,696,254...104,923,206
JBrowse link
G Cdh22 cadherin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:164,953,421...165,076,892
Ensembl chr 2:164,953,427...165,076,773
JBrowse link
G Cdh24 cadherin-like 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:54,868,688...54,878,853
Ensembl chr14:54,868,688...54,878,821
JBrowse link
G Cdh26 cadherin-like 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:178,072,263...178,129,159
Ensembl chr 2:178,072,324...178,129,159
JBrowse link
G Cdh3 cadherin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:107,237,484...107,283,543
Ensembl chr 8:107,237,523...107,283,929
JBrowse link
G Cdh4 cadherin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:179,084,228...179,541,166
Ensembl chr 2:179,084,224...179,541,166
JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IBA
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 8:104,828,247...104,871,136
Ensembl chr 8:104,828,257...104,871,143
JBrowse link
G Cdh6 cadherin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:13,028,785...13,176,493
Ensembl chr15:13,028,787...13,173,761
JBrowse link
G Cdh7 cadherin 7, type 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:109,909,967...110,073,002
Ensembl chr 1:109,910,161...110,067,887
JBrowse link
G Cdh8 cadherin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:99,751,103...100,144,298
Ensembl chr 8:99,751,103...100,143,103
JBrowse link
G Cdh9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:16,728,641...16,857,224
Ensembl chr15:16,728,842...16,857,180
JBrowse link
G Cdhr18 cadherin related family member 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:8,555,242...8,646,046
Ensembl chr14:8,555,285...8,655,145
JBrowse link
G Cldn5 claudin 5 involved_in ISO GO_Central GO_REF:0000119 NCBI chr16:18,595,597...18,597,012
Ensembl chr16:18,595,597...18,597,012
JBrowse link
G Flcn folliculin involved_in IMP (PMID:22965878) UniProt PMID:22965878 NCBI chr11:59,682,234...59,706,138
Ensembl chr11:59,682,234...59,700,842
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 5:142,946,110...142,958,944
Ensembl chr 5:142,946,098...142,958,940
JBrowse link
G Hdac7 histone deacetylase 7 acts_upstream_of_or_within IMP (PMID:16873063) MGI PMID:16873063 NCBI chr15:97,690,542...97,742,383
Ensembl chr15:97,690,545...97,742,383
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IMP (PMID:16473946) UniProt PMID:16473946 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447
JBrowse link
G Pkp4 plakophilin 4 involved_in IMP (PMID:22965878) UniProt PMID:22965878 NCBI chr 2:58,991,123...59,185,549
Ensembl chr 2:58,991,194...59,185,552
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in IMP (PMID:20413591) UniProt PMID:20413591 NCBI chr 5:114,760,213...114,796,497
Ensembl chr 5:114,760,213...114,796,482
JBrowse link
cell-cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd177 CD177 antigen involved_in IBA
ISO
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 7:24,443,408...24,459,759
Ensembl chr 7:24,443,408...24,459,736
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:36008380) UniProt PMID:36008380 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221
JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr13:95,738,288...95,754,974
Ensembl chr13:95,738,311...95,754,995
JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr13:95,648,226...95,661,748
Ensembl chr13:95,648,240...95,661,735
JBrowse link
G Kirrel1 kirre like nephrin family adhesion molecule 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 3:86,985,900...87,082,084
Ensembl chr 3:86,985,900...87,082,054
JBrowse link
G Lypd10 Ly6/PLAUR domain containing 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,408,645...24,413,960
Ensembl chr 7:24,408,667...24,413,960
JBrowse link
G Lypd11 Ly6/PLAUR domain containing 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:24,414,456...24,426,333
Ensembl chr 7:24,414,448...24,426,333
JBrowse link
G Mpz myelin protein zero acts_upstream_of_or_within IMP (PMID:11749037) MGI PMID:11749037 NCBI chr 1:170,978,282...170,988,699
Ensembl chr 1:170,978,280...170,988,699
JBrowse link
G Myadm myeloid-associated differentiation marker NOT|involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chr 7:3,337,563...3,347,871
Ensembl chr 7:3,337,605...3,348,958
JBrowse link
G Pard6a par-6 family cell polarity regulator alpha involved_in IDA (PMID:10954424) UniProt PMID:10954424 NCBI chr 8:106,427,780...106,430,126
Ensembl chr 8:106,427,780...106,430,128
JBrowse link
G Prtn3 proteinase 3 involved_in ISO GO_Central GO_REF:0000119 NCBI chr10:79,715,499...79,719,008
Ensembl chr10:79,710,310...79,719,008
JBrowse link
G Shroom2 shroom family member 2 acts_upstream_of_or_within IDA (PMID:17666436) MGI PMID:17666436 NCBI chr  X:151,392,505...151,553,784
Ensembl chr  X:151,392,505...151,552,461
JBrowse link
cell-cell junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajm1 apical junction component 1 involved_in IBA
IEA
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr 2:25,465,428...25,471,760
Ensembl chr 2:25,465,428...25,471,769
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 acts_upstream_of_or_within IGI (PMID:19013146) MGI PMID:19013146 NCBI chr 5:144,127,104...144,131,259
Ensembl chr 5:144,127,104...144,131,259
JBrowse link
G Ccm2 cerebral cavernous malformation 2 acts_upstream_of_or_within IMP (PMID:19151727) MGI PMID:19151727 NCBI chr11:6,496,887...6,546,761
Ensembl chr11:6,496,887...6,546,744
JBrowse link
G Cd2ap CD2-associated protein acts_upstream_of_or_within IGI
IMP
(PMID:19013146)
(PMID:25968128)
MGI PMID:19013146 PMID:25968128 NCBI chr17:43,059,857...43,187,593
Ensembl chr17:43,103,842...43,187,556
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP (PMID:23800882) UniProt PMID:23800882 NCBI chr 7:25,161,127...25,177,072
Ensembl chr 7:25,161,132...25,177,028
JBrowse link
G Cldn1 claudin 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr16:26,175,395...26,190,589
Ensembl chr16:26,175,392...26,190,591
JBrowse link
G Cldn6 claudin 6 acts_upstream_of_or_within IDA (PMID:17130295) MGI PMID:17130295 NCBI chr17:23,898,345...23,901,417
Ensembl chr17:23,898,223...23,901,420
JBrowse link
G Cldn9 claudin 9 acts_upstream_of_or_within IDA (PMID:17130295) MGI PMID:17130295 NCBI chr17:23,901,558...23,903,000
Ensembl chr17:23,901,558...23,903,000
JBrowse link
G Crb3 crumbs family member 3 acts_upstream_of_or_within ISA (PMID:12771187) MGI PMID:12771187 NCBI chr17:57,368,583...57,372,920
Ensembl chr17:57,366,105...57,372,918
JBrowse link
G Cxadr coxsackie virus and adenovirus receptor acts_upstream_of_or_within IMP (PMID:16543498) MGI PMID:16543498 NCBI chr16:78,098,114...78,156,673
Ensembl chr16:78,098,377...78,156,662
JBrowse link
G Flna filamin, alpha involved_in IMP (PMID:17172441) UniProt PMID:17172441 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (PMID:9620080) MGI PMID:9620080 NCBI chr10:56,253,297...56,266,519
Ensembl chr10:56,253,426...56,278,609
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within IMP (PMID:19151727) MGI PMID:19151727 NCBI chr16:33,504,754...33,591,946
Ensembl chr16:33,504,740...33,591,946
JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha involved_in ISO RGD
GO_Central
PMID:12749857 GO_REF:0000096 RGD:1625017 NCBI chr 2:163,348,731...163,414,827
Ensembl chr 2:163,348,728...163,414,830
JBrowse link
G Lims1 LIM and senescent cell antigen-like domains 1 acts_upstream_of_or_within
involved_in
IGI
IBA
(PMID:19652092) MGI
GO_Central
PMID:19652092 GO_REF:0000033 NCBI chr10:58,159,164...58,260,513
Ensembl chr10:58,159,288...58,260,513
JBrowse link
G Lims2 LIM and senescent cell antigen like domains 2 acts_upstream_of_or_within
involved_in
IGI
IBA
(PMID:19652092) MGI
GO_Central
PMID:19652092 GO_REF:0000033 NCBI chr18:32,055,346...32,091,673
Ensembl chr18:32,055,343...32,091,672
JBrowse link
G Marveld2 MARVEL (membrane-associating) domain containing 2 acts_upstream_of_or_within IMP
ISO
(PMID:16365161)
(PMID:23979167)
MGI PMID:16365161 PMID:23979167 GO_REF:0000008 NCBI chr13:100,732,465...100,753,479
Ensembl chr13:100,732,465...100,753,479
JBrowse link
G Marveld3 MARVEL (membrane-associating) domain containing 3 acts_upstream_of_or_within IMP
ISO
(PMID:20164257) MGI PMID:20164257 GO_REF:0000008 NCBI chr 8:110,674,541...110,688,837
Ensembl chr 8:110,674,546...110,688,835
JBrowse link
G Nf2 neurofibromin 2 acts_upstream_of_or_within IMP (PMID:12695331) MGI PMID:12695331 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536
JBrowse link
G Ocln occludin acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr13:100,633,012...100,689,226
Ensembl chr13:100,633,015...100,689,226
JBrowse link
G Pkhd1 polycystic kidney and hepatic disease 1 acts_upstream_of_positive_effect IMP (PMID:20875407) UniProt PMID:20875407 NCBI chr 1:20,128,003...20,688,306
Ensembl chr 1:20,128,003...20,688,288
JBrowse link
G Prkci protein kinase C, iota involved_in ISO
ISS
GO_Central
HGNC
GO_REF:0000024 GO_REF:0000119 NCBI chr 3:31,049,893...31,106,889
Ensembl chr 3:31,049,896...31,107,108
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IMP (PMID:20016102) MGI PMID:20016102 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO
ISS
GO_Central
AgBase
GO_REF:0000024 GO_REF:0000119 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO
IBA
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529
JBrowse link
G Tjp2 tight junction protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:24,071,860...24,202,492
Ensembl chr19:24,071,869...24,202,394
JBrowse link
G Tjp3 tight junction protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:81,109,022...81,127,415
Ensembl chr10:81,109,041...81,127,415
JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within IMP (PMID:33129760) MGI PMID:33129760 NCBI chr11:76,781,946...76,807,413
Ensembl chr11:76,792,985...76,807,413
JBrowse link
G Xirp2 xin actin-binding repeat containing 2 acts_upstream_of_or_within IMP (PMID:20360251) MGI PMID:20360251 NCBI chr 2:67,276,343...67,356,964
Ensembl chr 2:67,004,178...67,356,959
JBrowse link
cell-substrate junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn1 fibronectin 1 involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:12867986) GO_Central
MGI
PMID:12867986 GO_REF:0000033 NCBI chr 1:71,624,632...71,692,439
Ensembl chr 1:71,624,679...71,692,359
JBrowse link
G Itga5 integrin alpha 5 (fibronectin receptor alpha) acts_upstream_of_or_within IDA (PMID:12867986) MGI PMID:12867986 NCBI chr15:103,252,713...103,275,218
Ensembl chr15:103,252,713...103,275,190
JBrowse link
G Itgb3 integrin beta 3 acts_upstream_of_or_within IDA (PMID:12867986) MGI PMID:12867986 NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302
JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within IMP (PMID:12867986) MGI PMID:12867986 NCBI chr 4:43,531,513...43,562,583
Ensembl chr 4:43,531,519...43,562,691
JBrowse link
G Tns1 tensin 1 acts_upstream_of_or_within IMP (PMID:9087448) MGI PMID:9087448 NCBI chr 1:73,949,391...74,163,707
Ensembl chr 1:73,949,390...74,163,608
JBrowse link
cell-substrate junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab8b RAB8B, member RAS oncogene family involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr 9:66,750,891...66,826,987
Ensembl chr 9:66,750,946...66,826,969
JBrowse link
complement-mediated synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement component 1, q subcomponent, alpha polypeptide involved_in IMP (PMID:18083105) ARUK-UCL PMID:18083105 NCBI chr 4:136,623,227...136,626,155
Ensembl chr 4:136,623,228...136,626,114
JBrowse link
G C3 complement component 3 involved_in IMP (PMID:18083105) ARUK-UCL PMID:18083105 NCBI chr17:57,510,967...57,535,136
Ensembl chr17:57,510,970...57,535,136
JBrowse link
G Itgam integrin alpha M involved_in IMP (PMID:22632727) ARUK-UCL PMID:22632727 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (PMID:30548312) UniProt PMID:30548312 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175
JBrowse link
dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within IMP
IGI
(PMID:23365224) MGI PMID:23365224 NCBI chr 1:156,386,160...156,477,189
Ensembl chr 1:156,386,356...156,477,138
JBrowse link
G Ckap5 cytoskeleton associated protein 5 acts_upstream_of_or_within IMP (PMID:23936366) MGI PMID:23936366 NCBI chr 2:91,357,092...91,451,024
Ensembl chr 2:91,357,107...91,451,009
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:31141683) MGI PMID:31141683 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Cttn cortactin acts_upstream_of_or_within IGI (PMID:23365224) MGI PMID:23365224 NCBI chr 7:143,989,468...144,024,743
Ensembl chr 7:143,989,470...144,024,746
JBrowse link
G Igf1r insulin-like growth factor I receptor involved_in ISO GO_Central GO_REF:0000096 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Insr insulin receptor involved_in ISO GO_Central GO_REF:0000096 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617
JBrowse link
G Itga3 integrin alpha 3 acts_upstream_of_or_within IMP
IGI
(PMID:23595732) MGI PMID:23595732 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627
JBrowse link
G Itpka inositol 1,4,5-trisphosphate 3-kinase A acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 2:119,572,818...119,581,734
Ensembl chr 2:119,572,818...119,581,744
JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 9:13,660,397...13,720,192
Ensembl chr 9:13,659,706...13,717,777
JBrowse link
G Pick1 protein interacting with C kinase 1 involved_in IBA
ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 NCBI chr15:79,113,373...79,133,666
Ensembl chr15:79,113,373...79,133,684
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 acts_upstream_of_or_within IMP (PMID:21068316) MGI PMID:21068316 NCBI chr 2:59,442,167...59,676,557
Ensembl chr 2:59,442,386...59,676,493
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (PMID:31980586) ARUK-UCL PMID:31980586 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175
JBrowse link
dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in IMP (PMID:25851601) UniProt PMID:25851601 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031
JBrowse link
G Ctnnd2 catenin delta 2 involved_in IBA
ISO
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr15:30,172,680...31,029,490
Ensembl chr15:30,172,739...31,029,487
JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in IMP (PMID:31600191) UniProt PMID:31600191 NCBI chr10:76,098,581...76,181,194
Ensembl chr10:76,095,263...76,181,125
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IDA
ISO
(PMID:20952458) BHF-UCL
GO_Central
PMID:20952458 GO_REF:0000096 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in IBA
IMP
(PMID:25851601) GO_Central
UniProt
PMID:25851601 GO_REF:0000033 NCBI chr 1:80,478,785...80,736,482
Ensembl chr 1:80,478,790...80,736,244
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000096 GO_REF:0000107 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760
JBrowse link
G Epha5 Eph receptor A5 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 5:84,199,024...84,565,677
Ensembl chr 5:84,202,620...84,565,241
JBrowse link
G Ephb1 Eph receptor B1 acts_upstream_of_or_within
involved_in
IMP (PMID:17310244)
(PMID:14691139)
MGI
UniProt
PMID:14691139 PMID:17310244 NCBI chr 9:101,799,327...102,231,892
Ensembl chr 9:101,799,327...102,231,892
JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_or_within
involved_in
IDA
IMP
(PMID:17310244)
(PMID:14691139)
MGI
UniProt
PMID:14691139 PMID:17310244 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299
JBrowse link
G Ephb3 Eph receptor B3 involved_in IMP (PMID:14691139) UniProt PMID:14691139 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055
JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within IMP (PMID:24113571) MGI PMID:24113571 NCBI chr  X:7,796,355...7,814,284
Ensembl chr  X:7,796,359...7,814,128
JBrowse link
G Myo5b myosin VB involved_in ISO RGD
GO_Central
PMID:18984164 GO_REF:0000096 RGD:11533643 NCBI chr18:74,575,435...74,905,769
Ensembl chr18:74,574,007...74,904,564
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 involved_in IMP (PMID:25851601) UniProt PMID:25851601 NCBI chr  X:142,301,370...142,580,792
Ensembl chr  X:142,301,587...142,580,792
JBrowse link
G Prmt3 protein arginine N-methyltransferase 3 involved_in ISO RGD
GO_Central
PMID:20647003 GO_REF:0000096 RGD:9491824 NCBI chr 7:49,428,067...49,508,016
Ensembl chr 7:49,428,094...49,508,013
JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (PMID:18082964), (PMID:21411674) CACAO PMID:18082964 PMID:21411674 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within IMP (PMID:24113571) MGI PMID:24113571 NCBI chr 9:25,163,287...25,219,867
Ensembl chr 9:25,163,735...25,219,867
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in IMP (PMID:18272690) BHF-UCL PMID:18272690 NCBI chr 7:43,958,343...44,009,518
Ensembl chr 7:43,959,677...44,009,996
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 acts_upstream_of_or_within
involved_in
IMP (PMID:21558424)
(PMID:21167025), (PMID:21423165), (PMID:21558424)
MGI
BHF-UCL
PMID:21167025 PMID:21423165 PMID:21558424 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464
JBrowse link
G Wasl WASP like actin nucleation promoting factor involved_in IMP (PMID:25851601) UniProt PMID:25851601 NCBI chr 6:24,613,809...24,665,185
Ensembl chr 6:24,613,804...24,665,008
JBrowse link
G Wnt7a wingless-type MMTV integration site family, member 7A involved_in ISO
IGI
(PMID:21670302) GO_Central
ParkinsonsUK-UCL
PMID:21670302 GO_REF:0000119 NCBI chr 6:91,340,963...91,388,335
Ensembl chr 6:91,340,963...91,388,345
JBrowse link
G Zfp365 zinc finger protein 365 involved_in IMP (PMID:25983680) UniProt PMID:25983680 NCBI chr10:67,721,935...67,748,492
Ensembl chr10:67,721,933...67,748,492
JBrowse link
dendritic spine organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr11:59,102,237...59,119,042
Ensembl chr11:59,102,238...59,119,096
JBrowse link
G Chrna7 cholinergic receptor, nicotinic, alpha polypeptide 7 involved_in IMP (PMID:23270857) ARUK-UCL PMID:23270857 NCBI chr 7:62,748,440...62,862,274
Ensembl chr 7:62,748,440...62,862,317
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:31141683) MGI PMID:31141683 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO GO_Central GO_REF:0000096 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348
JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) involved_in ISO GO_Central GO_REF:0000096 NCBI chr16:9,385,765...9,813,744
Ensembl chr16:9,385,762...9,813,424
JBrowse link
G Lgmn legumain involved_in IGI (PMID:25326800) ARUK-UCL PMID:25326800 NCBI chr12:102,360,341...102,405,987
Ensembl chr12:102,360,343...102,406,072
JBrowse link
G Pick1 protein interacting with C kinase 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr15:79,113,373...79,133,666
Ensembl chr15:79,113,373...79,133,684
JBrowse link
G Rph3a rabphilin 3A involved_in ISO GO_Central GO_REF:0000096 NCBI chr 5:121,078,562...121,184,249
Ensembl chr 5:121,078,562...121,148,155
JBrowse link
G Xlr4a X-linked lymphocyte-regulated 4A acts_upstream_of_or_within IGI (PMID:32113966) MGI PMID:32113966 NCBI chr  X:72,117,949...72,126,133
Ensembl chr  X:72,117,951...72,126,084
JBrowse link
G Xlr4b X-linked lymphocyte-regulated 4B acts_upstream_of_or_within IGI (PMID:32113966) MGI PMID:32113966 NCBI chr  X:72,257,928...72,266,059
Ensembl chr  X:72,257,939...72,266,059
JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in ISO (PMID:29999492) UniProt PMID:29999492 NCBI chr 8:107,329,982...107,396,879
Ensembl chr 8:107,329,983...107,396,878
JBrowse link
G Dsg3 desmoglein 3 involved_in IMP (PMID:9701552) UniProt PMID:9701552 NCBI chr18:20,643,331...20,674,367
Ensembl chr18:20,643,331...20,680,516
JBrowse link
G Jup junction plakoglobin acts_upstream_of_or_within
involved_in
IMP
ISO
(PMID:18496566), (PMID:8954745), (PMID:9847250) MGI
GO_Central
PMID:8954745 PMID:9847250 PMID:18496566 GO_REF:0000119 NCBI chr11:100,259,682...100,288,639
Ensembl chr11:100,259,784...100,288,589
JBrowse link
G Pkp1 plakophilin 1 involved_in IMP (PMID:27375112) UniProt PMID:27375112 NCBI chr 1:135,799,132...135,846,945
Ensembl chr 1:135,799,133...135,846,945
JBrowse link
G Pkp2 plakophilin 2 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576
JBrowse link
G Pkp3 plakophilin 3 involved_in ISO
IMP
(PMID:27375112) GO_Central
UniProt
PMID:27375112 GO_REF:0000119 NCBI chr 7:140,658,202...140,670,424
Ensembl chr 7:140,658,131...140,670,423
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO GO_Central GO_REF:0000119 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754
JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai2 snail family zinc finger 2 involved_in ISO
IMP
(PMID:9182671) GO_Central
BHF-UCL
PMID:9182671 GO_REF:0000119 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249
JBrowse link
desmosome maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsc1 desmocollin 1 involved_in IMP (PMID:11714727) UniProt PMID:11714727 NCBI chr18:20,216,528...20,247,830
Ensembl chr18:20,217,241...20,247,928
JBrowse link
G Pkp1 plakophilin 1 involved_in IMP (PMID:27033150) UniProt PMID:27033150 NCBI chr 1:135,799,132...135,846,945
Ensembl chr 1:135,799,133...135,846,945
JBrowse link
desmosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsg2 desmoglein 2 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr18:20,691,247...20,737,583
Ensembl chr18:20,691,131...20,737,578
JBrowse link
G Dsp desmoplakin acts_upstream_of_or_within
involved_in
IMP (PMID:9864371)
(PMID:16917092)
MGI
BHF-UCL
PMID:9864371 PMID:16917092 NCBI chr13:38,335,357...38,382,553
Ensembl chr13:38,335,270...38,382,553
JBrowse link
G Grhl1 grainyhead like transcription factor 1 acts_upstream_of_or_within IMP (PMID:24586629) MGI PMID:24586629 NCBI chr12:24,622,234...24,667,390
Ensembl chr12:24,622,282...24,667,390
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:18703497) MGI PMID:18703497 NCBI chr 9:43,655,251...43,718,758
Ensembl chr 9:43,655,281...43,743,955
JBrowse link
G Perp PERP, TP53 apoptosis effector acts_upstream_of_or_within IMP (PMID:21285247) MGI PMID:21285247 NCBI chr10:18,720,819...18,732,821
Ensembl chr10:18,720,768...18,732,821
JBrowse link
G Pkp2 plakophilin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576
JBrowse link
G Pkp3 plakophilin 3 involved_in IMP (PMID:18079750) UniProt PMID:18079750 NCBI chr 7:140,658,202...140,670,424
Ensembl chr 7:140,658,131...140,670,423
JBrowse link
establishment of synaptic specificity at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chat choline O-acetyltransferase acts_upstream_of_or_within IMP (PMID:12533614) MGI PMID:12533614 NCBI chr14:32,130,160...32,187,866
Ensembl chr14:32,130,160...32,187,946
JBrowse link
G F2r coagulation factor II thrombin receptor involved_in ISO
ISS
RGD
UniProt
GO_Central
PMID:12815704 GO_REF:0000024 GO_REF:0000096 RGD:1582330 NCBI chr13:95,738,288...95,754,974
Ensembl chr13:95,738,311...95,754,995
JBrowse link
G Gphn gephyrin involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:10531433) GO_Central
MGI
PMID:10531433 GO_REF:0000033 NCBI chr12:78,264,099...78,731,546
Ensembl chr12:78,273,153...78,731,546
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in IMP (PMID:24094106) UniProt PMID:24094106 NCBI chr 6:124,407,715...124,441,743
Ensembl chr 6:124,407,540...124,441,753
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:31141683)
(PMID:23074245)
MGI PMID:23074245 PMID:31141683 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Grid2 glutamate receptor, ionotropic, delta 2 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 6:63,230,118...64,681,305
Ensembl chr 6:63,232,860...64,681,307
JBrowse link
G Lrrc4 leucine rich repeat containing 4 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:16980967) MGI
GO_Central
PMID:16980967 GO_REF:0000033 NCBI chr 6:28,828,125...28,831,746
Ensembl chr 6:28,661,830...28,831,746
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
IMP
(PMID:22960622)
(PMID:26440732)
ParkinsonsUK-UCL
ARUK-UCL
PMID:22960622 PMID:26440732 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within IMP (PMID:24554721) MGI PMID:24554721 NCBI chr 9:58,489,504...58,560,162
Ensembl chr 9:58,489,523...58,565,238
JBrowse link
G Plxnb2 plexin B2 involved_in IMP (PMID:29981480) UniProt PMID:29981480 NCBI chr15:89,039,752...89,064,960
Ensembl chr15:89,039,752...89,064,991
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IMP (PMID:27373832) UniProt PMID:27373832 NCBI chr 1:131,212,989...131,455,269
Ensembl chr 1:131,212,989...131,455,090
JBrowse link
excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (PMID:29752066) ARUK-UCL PMID:29752066 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175
JBrowse link
filtration diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:27711214) MGI PMID:27711214 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657
JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr12:80,214,316...80,307,165
Ensembl chr12:80,214,321...80,307,145
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr13:12,284,312...12,355,613
Ensembl chr13:12,284,312...12,355,641
JBrowse link
G Actn3 actinin alpha 3 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr19:4,911,244...4,927,937
Ensembl chr19:4,911,244...4,927,937
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within IMP (PMID:15728191) MGI PMID:15728191 NCBI chr14:54,804,926...54,815,118
Ensembl chr14:54,804,929...54,815,015
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 acts_upstream_of_or_within
involved_in
IDA
IBA
(PMID:10699171) MGI
GO_Central
PMID:10699171 GO_REF:0000033 NCBI chr  X:167,578,091...168,087,436
Ensembl chr  X:167,578,095...168,087,431
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:15292044) MGI PMID:15292044 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Cdh11 cadherin 11 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 8:103,358,727...103,512,125
Ensembl chr 8:103,358,727...103,512,274
JBrowse link
G Coro2b coronin, actin binding protein, 2B acts_upstream_of_or_within IMP (PMID:29162887) MGI PMID:29162887 NCBI chr 9:62,326,770...62,444,326
Ensembl chr 9:62,326,774...62,444,326
JBrowse link
G Cttn cortactin involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000096 NCBI chr 7:143,989,468...144,024,743
Ensembl chr 7:143,989,470...144,024,746
JBrowse link
G Dlc1 deleted in liver cancer 1 acts_upstream_of_or_within IMP (PMID:15710412) MGI PMID:15710412 NCBI chr 8:37,034,893...37,420,343
Ensembl chr 8:37,034,905...37,420,297
JBrowse link
G Fermt2 fermitin family member 2 involved_in IMP
ISO
(PMID:18483218) UniProt
GO_Central
PMID:18483218 GO_REF:0000119 NCBI chr14:45,696,252...45,767,767
Ensembl chr14:45,696,252...45,767,575
JBrowse link
G Itga2 integrin alpha 2 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:15591055 GO_REF:0000096 GO_REF:0000107 RGD:8693310 NCBI chr13:114,969,617...115,068,588
Ensembl chr13:114,969,617...115,068,636
JBrowse link
G Itgav integrin alpha V involved_in NAS (PMID:12878490) BHF-UCL PMID:12878490 NCBI chr 2:83,554,796...83,637,261
Ensembl chr 2:83,554,741...83,637,260
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in ISO RGD
GO_Central
PMID:14585963 GO_REF:0000096 RGD:1581775 NCBI chr17:24,292,654...24,370,957
Ensembl chr17:24,292,654...24,369,898
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 9:56,108,410...56,325,972
Ensembl chr 9:56,108,410...56,325,351
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr 3:94,965,841...95,014,241
Ensembl chr 3:94,965,841...95,014,241
JBrowse link
G Ptk2b PTK2 protein tyrosine kinase 2 beta involved_in ISO
IEA
RGD
GO_Central
Ensembl
PMID:14585963 GO_REF:0000096 GO_REF:0000107 RGD:1581775 NCBI chr14:66,390,706...66,518,549
Ensembl chr14:66,390,706...66,518,501
JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K involved_in ISO GO_Central GO_REF:0000119 NCBI chr10:27,950,406...28,473,393
Ensembl chr10:27,950,816...28,473,393
JBrowse link
G Pxn paxillin acts_upstream_of_or_within IDA (PMID:14636584) MGI PMID:14636584 NCBI chr 5:115,630,035...115,694,046
Ensembl chr 5:115,644,735...115,694,046
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 4:140,427,308...140,450,531
Ensembl chr 4:140,427,852...140,450,531
JBrowse link
G Rhod ras homolog family member D involved_in ISO GO_Central GO_REF:0000119 NCBI chr19:4,473,500...4,489,562
Ensembl chr19:4,475,487...4,489,460
JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 acts_upstream_of_or_within IMP (PMID:25071083) MGI PMID:25071083 NCBI chr15:75,576,097...75,586,268
Ensembl chr15:75,576,129...75,587,334
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in IDA (PMID:9461600) UniProt PMID:9461600 NCBI chr19:40,280,484...40,502,399
Ensembl chr19:40,283,197...40,502,223
JBrowse link
G Src Rous sarcoma oncogene involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within IMP (PMID:26437238) MGI PMID:26437238 NCBI chr17:88,905,043...88,955,293
Ensembl chr17:88,905,112...88,970,014
JBrowse link
G Taok2 TAO kinase 2 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 7:126,464,848...126,485,468
Ensembl chr 7:126,464,850...126,483,875
JBrowse link
G Tesk2 testis-specific kinase 2 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr 4:116,578,107...116,661,450
Ensembl chr 4:116,578,145...116,663,153
JBrowse link
G Thsd1 thrombospondin, type I, domain 1 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr 8:22,711,623...22,752,973
Ensembl chr 8:22,717,329...22,751,350
JBrowse link
G Thy1 thymus cell antigen 1, theta involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000096 NCBI chr 9:43,954,681...43,959,876
Ensembl chr 9:43,954,681...43,959,876
JBrowse link
G Whamm WAS protein homolog associated with actin, golgi membranes and microtubules involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 7:81,220,403...81,246,585
Ensembl chr 7:81,221,014...81,246,584
JBrowse link
focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:27378169) MGI PMID:27378169 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772
JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within IMP (PMID:26437238) MGI PMID:26437238 NCBI chr17:88,905,043...88,955,293
Ensembl chr17:88,905,112...88,970,014
JBrowse link
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glrb glycine receptor, beta subunit acts_upstream_of_or_within IGI (PMID:19723286) MGI PMID:19723286 NCBI chr 3:80,750,905...80,820,994
Ensembl chr 3:80,750,906...80,820,967
JBrowse link
G Gphn gephyrin acts_upstream_of_or_within
involved_in
IGI
IBA
ISS
ISO
(PMID:19723286) MGI
GO_Central
UniProt
PMID:19723286 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr12:78,264,099...78,731,546
Ensembl chr12:78,273,153...78,731,546
JBrowse link
G Lhfpl4 lipoma HMGIC fusion partner-like protein 4 involved_in IBA
IMP
(PMID:28279354), (PMID:28978485) GO_Central
UniProt
PMID:28279354 PMID:28978485 GO_REF:0000033 NCBI chr 6:113,145,048...113,172,345
Ensembl chr 6:113,145,051...113,172,345
JBrowse link
G Nrxn1 neurexin I involved_in IDA (PMID:15620359) BHF-UCL PMID:15620359 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Shisa7 shisa family member 7 involved_in IBA
IDA
(PMID:31601770) GO_Central
UniProt
PMID:31601770 GO_REF:0000033 NCBI chr 7:4,828,551...4,847,788
Ensembl chr 7:4,828,551...4,847,695
JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:12577316 GO_REF:0000096 GO_REF:0000107 RGD:2289808 NCBI chr18:35,251,955...35,387,829
Ensembl chr18:35,251,912...35,387,832
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 3:96,939,718...96,960,950
Ensembl chr 3:96,812,009...96,984,732
JBrowse link
G Gjb2 gap junction protein, beta 2 acts_upstream_of_or_within
involved_in
IMP
ISO
(PMID:24590285) MGI
GO_Central
PMID:24590285 GO_REF:0000119 NCBI chr14:57,336,059...57,342,159
Ensembl chr14:57,336,057...57,342,159
JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr14:57,360,760...57,370,764
Ensembl chr14:57,360,760...57,371,068
JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in IMP (PMID:22982984) BHF-UCL PMID:22982984 NCBI chr11:102,690,303...102,710,512
Ensembl chr11:102,690,405...102,710,526
JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISS
ISO
(PMID:12154091) UniProt
GO_Central
PMID:12154091 GO_REF:0000119 NCBI chr11:98,870,773...98,873,846
Ensembl chr11:98,873,006...98,873,842
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO RGD
GO_Central
PMID:17673670 GO_REF:0000096 RGD:6784510 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 acts_upstream_of_or_within
involved_in
IGI
IDA
IMP
(PMID:29107521)
(PMID:15620359)
MGI
BHF-UCL
PMID:15620359 PMID:29107521 NCBI chr11:69,713,949...69,728,610
Ensembl chr11:69,713,948...69,728,610
JBrowse link
G Nrxn1 neurexin I involved_in IDA (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Nrxn2 neurexin II involved_in IDA (PMID:21424692) BHF-UCL PMID:21424692 NCBI chr19:6,468,786...6,583,247
Ensembl chr19:6,468,761...6,594,199
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within IGI
IMP
(PMID:29107521) MGI PMID:29107521 NCBI chr 3:72,954,399...72,965,298
Ensembl chr 3:72,954,598...72,965,136
JBrowse link
G Zdhhc12 zinc finger, DHHC domain containing 12 involved_in IMP (PMID:25025157) UniProt PMID:25025157 NCBI chr 2:29,980,956...29,983,647
Ensembl chr 2:29,980,956...29,983,660
JBrowse link
glycine receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:9812897) MGI
GO_Central
PMID:9812897 GO_REF:0000033 NCBI chr12:78,264,099...78,731,546
Ensembl chr12:78,273,153...78,731,546
JBrowse link
guanylate kinase-associated protein clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrxn1 neurexin I involved_in IDA (PMID:15620359) BHF-UCL PMID:15620359 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (PMID:21558424) CACAO PMID:21558424 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464
JBrowse link
hemidesmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col17a1 collagen, type XVII, alpha 1 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr19:47,634,783...47,680,460
Ensembl chr19:47,634,783...47,680,533
JBrowse link
G Dst dystonin involved_in ISO GO_Central GO_REF:0000119 NCBI chr 1:33,946,969...34,347,743
Ensembl chr 1:33,947,306...34,347,742
JBrowse link
G Itgb4 integrin beta 4 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr11:115,865,556...115,899,238
Ensembl chr11:115,865,535...115,899,238
JBrowse link
G Lama3 laminin, alpha 3 involved_in ISO
IEA
RGD
GO_Central
Ensembl
PMID:8923212 GO_REF:0000096 GO_REF:0000107 RGD:633107 NCBI chr18:12,466,806...12,716,070
Ensembl chr18:12,466,876...12,716,070
JBrowse link
G Lamc1 laminin, gamma 1 involved_in ISO
ISS
GO_Central
HGNC-UCL
GO_REF:0000024 GO_REF:0000119 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532
JBrowse link
G Plec plectin involved_in IBA
ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor protein involved_in IMP (PMID:25534236), (PMID:30679375) UniProt PMID:25534236 PMID:30679375 NCBI chr 2:171,878,256...171,885,386
Ensembl chr 2:171,878,153...171,885,386
JBrowse link
G Clstn2 calsyntenin 2 involved_in IMP (PMID:26171716) UniProt PMID:26171716 NCBI chr 9:97,326,448...97,915,433
Ensembl chr 9:97,326,448...97,915,234
JBrowse link
G Clstn3 calsyntenin 3 involved_in IMP (PMID:24094106) UniProt PMID:24094106 NCBI chr 6:124,407,715...124,441,743
Ensembl chr 6:124,407,540...124,441,753
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:31141683)
(PMID:23074245)
MGI PMID:23074245 PMID:31141683 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in IMP (PMID:30679375) UniProt PMID:30679375 NCBI chr  X:58,107,499...58,630,932
Ensembl chr  X:58,107,505...58,613,431
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha 1 involved_in ISO
IBA
IDA
(PMID:27129275) GO_Central
UniProt
PMID:27129275 GO_REF:0000033 GO_REF:0000119 NCBI chr11:42,021,766...42,073,893
Ensembl chr11:42,021,766...42,073,757
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 involved_in IDA
IBA
(PMID:27129275) UniProt
GO_Central
PMID:27129275 GO_REF:0000033 NCBI chr 5:71,115,735...71,253,192
Ensembl chr 5:71,114,940...71,253,192
JBrowse link
G Gabra3 gamma-aminobutyric acid type A receptor subunit alpha 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:71,476,282...71,700,525
Ensembl chr  X:71,476,287...71,700,454
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:71,727,077...71,815,651
Ensembl chr 5:71,727,092...71,815,651
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:57,057,417...57,240,808
Ensembl chr 7:57,057,420...57,159,807
JBrowse link
G Gabra6 gamma-aminobutyric acid type A receptor subunit alpha 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:42,197,264...42,211,977
Ensembl chr11:42,197,264...42,211,899
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in IDA
ISO
(PMID:27129275) UniProt
GO_Central
PMID:27129275 GO_REF:0000119 NCBI chr11:42,310,342...42,523,418
Ensembl chr11:42,310,584...42,519,855
JBrowse link
G Gabrb3 GABRB3, gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO
IDA
(PMID:27129275) GO_Central
UniProt
PMID:27129275 GO_REF:0000119 NCBI chr 7:57,240,266...57,478,550
Ensembl chr 7:57,069,440...57,478,550
JBrowse link
G Gabre gamma-aminobutyric acid (GABA) A receptor, subunit epsilon involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:71,300,532...71,318,433
Ensembl chr  X:71,299,605...71,318,409
JBrowse link
G Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:70,906,512...70,999,960
Ensembl chr 5:70,908,390...70,999,960
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor, subunit gamma 2 involved_in ISO
IBA
IDA
(PMID:27129275) GO_Central
UniProt
PMID:27129275 GO_REF:0000033 GO_REF:0000119 NCBI chr11:41,801,017...41,891,684
Ensembl chr11:41,801,030...41,891,684
JBrowse link
G Gabrg3 gamma-aminobutyric acid type A receptor, subunit gamma 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:56,366,211...57,037,173
Ensembl chr 7:56,366,213...57,036,936
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in IMP (PMID:30125937) UniProt PMID:30125937 NCBI chr 8:70,536,179...70,543,512
Ensembl chr 8:70,536,107...70,543,512
JBrowse link
G Lgi2 leucine-rich repeat LGI family, member 2 involved_in IBA
IMP
(PMID:30679375) GO_Central
UniProt
PMID:30679375 GO_REF:0000033 NCBI chr 5:52,690,859...52,723,689
Ensembl chr 5:52,690,859...52,723,804
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within IDA
IMP
(PMID:23358245) MGI PMID:23358245 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA (PMID:22960622) ParkinsonsUK-UCL PMID:22960622 NCBI chr11:69,713,949...69,728,610
Ensembl chr11:69,713,948...69,728,610
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in IMP (PMID:18815592) UniProt PMID:18815592 NCBI chr19:5,034,381...5,053,467
Ensembl chr19:5,034,383...5,040,344
JBrowse link
G Plxnb1 plexin B1 involved_in IMP (PMID:23699507), (PMID:29981480) UniProt PMID:23699507 PMID:29981480 NCBI chr 9:108,922,915...108,948,983
Ensembl chr 9:108,924,457...108,948,985
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IMP (PMID:27373832) UniProt PMID:27373832 NCBI chr 1:131,212,989...131,455,269
Ensembl chr 1:131,212,989...131,455,090
JBrowse link
maintenance of postsynaptic density structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ARF GTPase 6 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000096 GO_REF:0000107 NCBI chr12:69,418,924...69,422,754
Ensembl chr12:69,418,924...69,420,557
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in IMP
IDA
(PMID:31068362) SynGO PMID:31068362 NCBI chr 4:127,880,310...128,461,459
Ensembl chr 4:127,881,650...128,461,449
JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in IDA
IEP
IMP
(PMID:19229292) SynGO PMID:19229292 NCBI chr 2:91,763,167...91,806,788
Ensembl chr 2:91,763,169...91,806,209
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:90,125,399...92,098,454
Ensembl chr 7:90,125,880...92,098,455
JBrowse link
G Mpp2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) involved_in IEA GOC GO_REF:0000108 NCBI chr11:101,947,841...101,979,464
Ensembl chr11:101,947,841...101,979,341
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP
IDA
(PMID:34613779) SynGO PMID:34613779 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in IMP
IDA
(PMID:34613779) SynGO PMID:34613779 NCBI chr 6:92,347,876...92,683,233
Ensembl chr 6:92,347,889...92,683,136
JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr19:46,300,524...46,316,566
Ensembl chr19:46,300,526...46,315,595
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:43,958,343...44,009,518
Ensembl chr 7:43,959,677...44,009,996
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA GOC GO_REF:0000108 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464
JBrowse link
maintenance of postsynaptic specialization structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in IDA
IMP
(PMID:30792275) SynGO PMID:30792275 NCBI chr 5:81,167,600...81,980,556
Ensembl chr 5:81,167,985...81,972,980
JBrowse link
G Cadm1 cell adhesion molecule 1 involved_in IMP
IDA
(PMID:21145003) SynGO PMID:21145003 NCBI chr 9:47,441,468...47,773,578
Ensembl chr 9:47,441,471...47,769,413
JBrowse link
G Hspa8 heat shock protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) involved_in ISO GO_Central GO_REF:0000096 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Itgb3 integrin beta 3 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000096 GO_REF:0000107 NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000096 GO_REF:0000107 NCBI chr  X:97,597,886...97,934,691
Ensembl chr  X:97,597,883...97,934,631
JBrowse link
G Rapsn receptor-associated protein of the synapse involved_in IEA GOC GO_REF:0000108 NCBI chr 2:90,864,594...90,876,074
Ensembl chr 2:90,865,965...90,876,074
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 homolog (rat) involved_in IDA
IMP
(PMID:27565345) SynGO PMID:27565345 NCBI chr17:27,160,186...27,191,408
Ensembl chr17:27,160,227...27,191,408
JBrowse link
maintenance of presynaptic active zone structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon involved_in IEA GOC GO_REF:0000108 NCBI chr 9:107,973,221...108,067,618
Ensembl chr 9:107,973,221...108,067,583
JBrowse link
G Ctbp2 C-terminal binding protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:132,588,727...132,726,048
Ensembl chr 7:132,589,292...132,726,083
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in IEA
IBA
GOC
GO_Central
GO_REF:0000033 GO_REF:0000108 NCBI chr 6:119,547,757...119,830,985
Ensembl chr 6:119,547,757...119,825,128
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in IEA
IBA
GOC
GO_Central
GO_REF:0000033 GO_REF:0000108 NCBI chr14:27,344,232...28,200,494
Ensembl chr14:27,344,385...28,200,494
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IEA GOC GO_REF:0000108 NCBI chr 5:14,564,924...14,913,479
Ensembl chr 5:14,564,932...14,913,473
JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within IMP (PMID:11359932) MGI PMID:11359932 NCBI chr 8:71,207,258...71,211,276
Ensembl chr 8:71,207,328...71,211,323
JBrowse link
G Rimbp2 RIMS binding protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:128,834,852...129,030,636
Ensembl chr 5:128,834,855...129,030,550
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:22,356,196...22,845,239
Ensembl chr 1:22,356,475...22,845,203
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in IEA GOC GO_REF:0000108 NCBI chr15:39,061,681...39,547,768
Ensembl chr15:39,061,656...39,547,768
JBrowse link
maintenance of synapse structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within IMP (PMID:25611509) MGI PMID:25611509 NCBI chr 1:25,106,557...25,869,338
Ensembl chr 1:25,106,557...25,868,788
JBrowse link
G Appl1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr14:26,640,943...26,692,567
Ensembl chr14:26,640,945...26,693,189
JBrowse link
G C1ql1 complement component 1, q subcomponent-like 1 acts_upstream_of_or_within IMP (PMID:25611509) MGI PMID:25611509 NCBI chr11:102,830,090...102,837,542
Ensembl chr11:102,830,090...102,837,514
JBrowse link
G Cbln1 cerebellin 1 precursor protein involved_in IBA
IMP
(PMID:29691328) GO_Central
UniProt
PMID:29691328 GO_REF:0000033 NCBI chr 8:88,195,481...88,199,220
Ensembl chr 8:88,195,033...88,199,237
JBrowse link
G Cbln2 cerebellin 2 precursor protein involved_in IBA
IMP
(PMID:29691328) GO_Central
UniProt
PMID:29691328 GO_REF:0000033 NCBI chr18:86,727,226...86,736,410
Ensembl chr18:86,729,235...86,736,408
JBrowse link
G Cbln3 cerebellin 3 precursor protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:56,116,377...56,121,713
Ensembl chr14:56,116,370...56,121,849
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:25951243), (PMID:31141683) MGI PMID:25951243 PMID:31141683 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Grn granulin involved_in IMP
IDA
(PMID:29398357) SynGO PMID:29398357 NCBI chr11:102,321,333...102,327,635
Ensembl chr11:102,321,141...102,327,874
JBrowse link
G L1cam L1 cell adhesion molecule involved_in IDA
IMP
(PMID:30846310) SynGO PMID:30846310 NCBI chr  X:72,897,384...72,924,843
Ensembl chr  X:72,897,384...72,939,711
JBrowse link
G Nlgn1 neuroligin 1 involved_in NAS (PMID:29504935) ComplexPortal PMID:29504935 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
G Nrxn1 neurexin I involved_in NAS (PMID:29504935) ComplexPortal PMID:29504935 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Plxna4 plexin A4 involved_in IDA
IMP
(PMID:24831527) SynGO PMID:24831527 NCBI chr 6:32,121,478...32,565,127
Ensembl chr 6:32,121,203...32,565,127
JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 4:156,077,300...156,098,067
Ensembl chr 4:156,077,329...156,098,067
JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A involved_in IMP
IDA
(PMID:24831527) SynGO PMID:24831527 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533
JBrowse link
G Sort1 sortilin 1 involved_in IMP
IDA
(PMID:29398357) SynGO PMID:29398357 NCBI chr 3:108,191,272...108,268,835
Ensembl chr 3:108,191,398...108,268,827
JBrowse link
modification of dendritic spine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:64,892,865...65,053,779
Ensembl chr11:64,892,865...65,053,787
JBrowse link
G Synpo synaptopodin involved_in IBA
ISO
GO_Central GO_REF:0000033 GO_REF:0000119 NCBI chr18:60,727,053...60,793,241
Ensembl chr18:60,727,045...60,793,214
JBrowse link
modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3 ABI family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:95,720,898...95,733,302
Ensembl chr11:95,720,900...95,733,302
JBrowse link
G Cabp1 calcium binding protein 1 involved_in IMP
IDA
(PMID:29478916) SynGO PMID:29478916 NCBI chr 5:115,306,750...115,332,440
Ensembl chr 5:115,306,748...115,332,440
JBrowse link
G Cap1 cyclase associated actin cytoskeleton regulatory protein 1 involved_in IMP
IDA
(PMID:36264429) SynGO PMID:36264429 NCBI chr 4:122,752,841...122,779,869
Ensembl chr 4:122,752,840...122,779,849
JBrowse link
G Cfl1 cofilin 1, non-muscle involved_in ISO GO_Central GO_REF:0000096 NCBI chr19:5,540,483...5,544,059
Ensembl chr19:5,540,483...5,545,229
JBrowse link
G Ctnna2 catenin alpha 2 involved_in IMP
IDA
(PMID:15034585) SynGO PMID:15034585 NCBI chr 6:76,858,620...77,956,798
Ensembl chr 6:76,858,620...77,956,682
JBrowse link
G Cttn cortactin involved_in ISO GO_Central GO_REF:0000096 NCBI chr 7:143,989,468...144,024,743
Ensembl chr 7:143,989,470...144,024,746
JBrowse link
G Dixdc1 DIX domain containing 1 involved_in IMP
IDA
(PMID:27829159) SynGO PMID:27829159 NCBI chr 9:50,574,052...50,650,900
Ensembl chr 9:50,574,052...50,650,817
JBrowse link
G Itpka inositol 1,4,5-trisphosphate 3-kinase A involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000096 GO_REF:0000107 NCBI chr 2:119,572,818...119,581,734
Ensembl chr 2:119,572,818...119,581,744
JBrowse link
G Kalrn kalirin, RhoGEF kinase involved_in ISO GO_Central GO_REF:0000096 NCBI chr16:33,789,443...34,393,647
Ensembl chr16:33,789,443...34,393,902
JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle involved_in ISO GO_Central GO_REF:0000096 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458
JBrowse link
G Pfn1 profilin 1 involved_in IDA
IMP
(PMID:26951674) SynGO PMID:26951674 NCBI chr11:70,542,670...70,547,625
Ensembl chr11:70,542,676...70,545,470
JBrowse link
G Pfn2 profilin 2 involved_in IDA
IMP
(PMID:26951674) SynGO PMID:26951674 NCBI chr 3:57,749,316...57,755,178
Ensembl chr 3:57,749,316...57,755,500
JBrowse link
G Sptb spectrin beta, erythrocytic involved_in ISO GO_Central GO_REF:0000119 NCBI chr12:76,627,262...76,757,321
Ensembl chr12:76,627,262...76,757,321
JBrowse link
G Wasf1 WASP family, member 1 involved_in IDA
IMP
(PMID:16862120) SynGO PMID:16862120 NCBI chr10:40,759,476...40,814,565
Ensembl chr10:40,759,471...40,814,566
JBrowse link
G Wasf3 WASP family, member 3 involved_in IDA
IMP
(PMID:16190876) SynGO PMID:16190876 NCBI chr 5:146,317,411...146,410,425
Ensembl chr 5:146,321,795...146,410,425
JBrowse link
modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IDA (PMID:23739967) SynGO PMID:23739967 NCBI chr11:64,892,865...65,053,779
Ensembl chr11:64,892,865...65,053,787
JBrowse link
G Cttn cortactin involved_in ISO GO_Central GO_REF:0000096 NCBI chr 7:143,989,468...144,024,743
Ensembl chr 7:143,989,470...144,024,746
JBrowse link
G Dlgap3 DLG associated protein 3 involved_in IDA
IEP
IMP
(PMID:17713528) SynGO PMID:17713528 NCBI chr 4:127,062,090...127,130,815
Ensembl chr 4:127,062,997...127,130,815
JBrowse link
G Dlgap4 DLG associated protein 4 involved_in IDA
IMP
(PMID:30664629) SynGO PMID:30664629 NCBI chr 2:156,455,431...156,606,283
Ensembl chr 2:156,455,625...156,606,283
JBrowse link
G Drd1 dopamine receptor D1 involved_in EXP
IDA
(PMID:25258080) SynGO PMID:25258080 NCBI chr13:54,205,202...54,209,677
Ensembl chr13:54,205,202...54,209,724
JBrowse link
G Filip1 filamin A interacting protein 1 involved_in IDA
IMP
(PMID:25220605) SynGO PMID:25220605 NCBI chr 9:79,708,461...79,920,135
Ensembl chr 9:79,712,376...79,920,133
JBrowse link
G Rap1b RAS related protein 1b involved_in IDA
IMP
(PMID:26844834) SynGO PMID:26844834 NCBI chr10:117,650,502...117,681,879
Ensembl chr10:117,649,776...117,681,940
JBrowse link
G Sarm1 sterile alpha and HEAT/Armadillo motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,361,099...78,388,642
Ensembl chr11:78,363,156...78,388,580
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 2:166,789,469...166,838,253
Ensembl chr 2:166,789,469...166,838,219
JBrowse link
modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:55,491,556...55,582,381
Ensembl chr 7:55,491,493...55,582,350
JBrowse link
G Pgrmc1 progesterone receptor membrane component 1 involved_in ISO GO_Central GO_REF:0000096 NCBI chr  X:35,861,846...35,869,732
Ensembl chr  X:35,861,859...35,869,732
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279
JBrowse link
modification of synaptic structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp9 matrix metallopeptidase 9 involved_in ISO PMID:19047646 SynGO PMID:19047646 RGD:405650393 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770
JBrowse link
multiple spine synapse organization, single dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IMP (PMID:24487234) ARUK-UCL PMID:24487234 NCBI chr 9:119,877,749...119,897,362
Ensembl chr 9:119,877,749...119,898,945
JBrowse link
negative regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr13:38,529,098...38,684,283
Ensembl chr13:38,529,083...38,684,278
JBrowse link
G Rdx radixin involved_in ISO GO_Central GO_REF:0000119 NCBI chr 9:51,958,450...52,000,038
Ensembl chr 9:51,958,473...52,011,763
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of kappaB kinase beta involved_in ISO GO_Central GO_REF:0000119 NCBI chr 8:23,149,228...23,196,605
Ensembl chr 8:23,149,228...23,196,605
JBrowse link
G Mir105 microRNA 105 acts_upstream_of ISO (PMID:24735924) ARUK-UCL PMID:24735924 NCBI chr  X:71,635,106...71,635,185
Ensembl chr  X:71,635,106...71,635,185
JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:27277258) ARUK-UCL PMID:27277258 NCBI chr11:87,647,690...87,647,753
Ensembl chr11:87,647,690...87,647,753
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr18:10,064,401...10,182,225
Ensembl chr18:10,064,401...10,182,045
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO GO_Central GO_REF:0000119 NCBI chr12:16,944,808...17,038,275
Ensembl chr12:16,944,896...17,037,824
JBrowse link
G Rps6 ribosomal protein S6 involved_in ISO RGD
GO_Central
PMID:25217631 GO_REF:0000096 RGD:11041641 NCBI chr 4:86,772,336...86,775,604
Ensembl chr 4:86,772,897...86,775,649
JBrowse link
G Rps6-ps4 ribosomal protein S6, pseudogene 4 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 2:75,021,339...75,022,198
Ensembl chr 2:75,021,417...75,022,166
JBrowse link
G Tnf tumor necrosis factor involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within ISO GO_Central GO_REF:0000119 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Cfl1 cofilin 1, non-muscle involved_in ISO RGD
GO_Central
PMID:23974706 GO_REF:0000096 RGD:11570553 NCBI chr19:5,540,483...5,544,059
Ensembl chr19:5,540,483...5,545,229
JBrowse link
G Fyn Fyn proto-oncogene involved_in IGI (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377
JBrowse link
G Grin2b glutamate receptor, ionotropic, NMDA2B (epsilon 2) involved_in IGI (PMID:22820466) ARUK-UCL PMID:22820466 NCBI chr 6:135,690,219...136,150,658
Ensembl chr 6:135,690,231...136,150,509
JBrowse link
G Prnp prion protein involved_in IGI (PMID:24012003)
(PMID:22820466)
ARUK-UCL PMID:22820466 PMID:24012003 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm3 dynamin 3 involved_in ISO RGD
GO_Central
PMID:17880892 GO_REF:0000096 RGD:8553820 NCBI chr 1:161,810,022...162,305,890
Ensembl chr 1:161,810,022...162,305,603
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISO
IEA
RGD
GO_Central
Ensembl
PMID:20531346 GO_REF:0000096 GO_REF:0000107 RGD:11251757 NCBI chr13:45,075,552...45,155,614
Ensembl chr13:45,075,551...45,155,623
JBrowse link
G Efna1 ephrin A1 involved_in IDA (PMID:17143272) UniProt PMID:17143272 NCBI chr 3:89,179,037...89,188,258
Ensembl chr 3:89,179,040...89,188,449
JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in IDA (PMID:17143272) UniProt PMID:17143272 NCBI chr 1:87,404,551...87,501,661
Ensembl chr 1:87,404,556...87,501,592
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
IMP
(PMID:23143522) GO_Central
BHF-UCL
PMID:23143522 GO_REF:0000119 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
G Nlgn3 neuroligin 3 involved_in IMP (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:100,342,785...100,364,956
Ensembl chr  X:100,342,774...100,369,569
JBrowse link
G Pten phosphatase and tensin homolog involved_in IMP (PMID:16675393) CACAO PMID:16675393 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Twf1 twinfilin actin binding protein 1 ISO RGD PMID:33963280 RGD:596938166 NCBI chr15:94,475,829...94,487,727
Ensembl chr15:94,475,832...94,487,770
JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO
IEA
RGD
GO_Central
Ensembl
PMID:25867122 GO_REF:0000096 GO_REF:0000107 RGD:11079590 NCBI chr 7:58,871,891...58,960,585
Ensembl chr 7:58,878,498...58,961,284
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in IMP (PMID:35420982) UniProt PMID:35420982 NCBI chr 6:124,407,715...124,441,743
Ensembl chr 6:124,407,540...124,441,753
JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 involved_in ISO
IBA
RGD
GO_Central
PMID:23769722 GO_REF:0000033 GO_REF:0000096 RGD:152975632 NCBI chr 5:103,573,058...103,746,227
Ensembl chr 5:103,573,058...103,746,169
JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor, type II-like 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr15:101,026,403...101,043,217
Ensembl chr15:101,026,403...101,043,217
JBrowse link
G Apod apolipoprotein D involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr16:31,115,010...31,133,626
Ensembl chr16:31,115,010...31,133,626
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr  X:167,578,091...168,087,436
Ensembl chr  X:167,578,095...168,087,431
JBrowse link
G Clasp2 CLIP associating protein 2 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 9:113,567,776...113,748,765
Ensembl chr 9:113,570,541...113,748,750
JBrowse link
G Coro1c coronin, actin binding protein 1C involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 5:113,980,500...114,046,767
Ensembl chr 5:113,980,497...114,046,819
JBrowse link
G Dlc1 deleted in liver cancer 1 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 8:37,034,893...37,420,343
Ensembl chr 8:37,034,905...37,420,297
JBrowse link
G Dmtn dematin actin binding protein involved_in IMP (PMID:18505823) UniProt PMID:18505823 NCBI chr14:70,839,624...70,873,488
Ensembl chr14:70,838,703...70,873,418
JBrowse link
G Dusp22 dual specificity phosphatase 22 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr13:30,844,042...30,895,215
Ensembl chr13:30,843,982...30,895,214
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 NCBI chr14:14,152,166...14,173,503
Ensembl chr14:14,151,750...14,173,499
JBrowse link
G Itgb1bp1 integrin beta 1 binding protein 1 involved_in IBA
ISO
IMP
(PMID:18227284) GO_Central
UniProt
PMID:18227284 GO_REF:0000033 GO_REF:0000119 NCBI chr12:21,317,247...21,336,285
Ensembl chr12:21,290,826...21,336,285
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in ISO RGD
GO_Central
PMID:20197276 GO_REF:0000096 RGD:13800550 NCBI chr10:127,374,026...127,457,158
Ensembl chr10:127,374,030...127,457,017
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:15044209 GO_REF:0000096 GO_REF:0000107 RGD:1582604 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Phldb2 pleckstrin homology like domain, family B, member 2 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr16:45,566,593...45,773,961
Ensembl chr16:45,566,606...45,773,961
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in IMP (PMID:19738201) UniProt PMID:19738201 NCBI chr 4:140,427,308...140,450,531
Ensembl chr 4:140,427,852...140,450,531
JBrowse link
G Src Rous sarcoma oncogene involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000096 GO_REF:0000107 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IMP (PMID:25017399) BHF-UCL PMID:25017399 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790
JBrowse link
G Il1b interleukin 1 beta involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059
JBrowse link
G Mir23a microRNA 23a ISO RGD PMID:25798059 RGD:13592600 NCBI chr 8:84,935,147...84,935,221
Ensembl chr 8:84,935,147...84,935,221
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor protein involved_in IMP (PMID:24467251) UniProt PMID:24467251 NCBI chr 8:88,195,481...88,199,220
Ensembl chr 8:88,195,033...88,199,237
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptn pleiotrophin involved_in ISO RGD
GO_Central
PMID:7722643 GO_REF:0000096 RGD:9834945 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1, non-muscle involved_in ISO RGD
GO_Central
PMID:26169356 GO_REF:0000096 RGD:11074527 NCBI chr19:5,540,483...5,544,059
Ensembl chr19:5,540,483...5,545,229
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within IMP (PMID:30902970) MGI PMID:30902970 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IDA (PMID:29643768) ARUK-UCL PMID:29643768 NCBI chr19:30,523,276...30,526,896
Ensembl chr19:30,523,263...30,527,065
JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd9 frizzled class receptor 9 involved_in IMP (PMID:24860427) UniProt PMID:24860427 NCBI chr 5:135,277,792...135,279,901
Ensembl chr 5:135,277,792...135,280,084
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in IDA (PMID:19036963) BHF-UCL PMID:19036963 NCBI chr 4:28,811,840...28,969,391
Ensembl chr 4:28,813,131...28,967,499
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO RGD
GO_Central
PMID:23358245 GO_REF:0000096 RGD:9743980 NCBI chr17:30,046,930...30,107,557
Ensembl chr17:30,046,923...30,189,061
JBrowse link
G Negr1 neuronal growth regulator 1 ISO RGD PMID:19711485 RGD:596948412 NCBI chr 3:156,266,082...157,022,101
Ensembl chr 3:156,267,431...157,022,082
JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within IMP (PMID:15378065) MGI PMID:15378065 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129
JBrowse link
G Rhoa ras homolog family member A involved_in ISO RGD
GO_Central
PMID:27893610 GO_REF:0000096 RGD:243048440 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO RGD
GO_Central
PMID:27893610 GO_REF:0000096 RGD:243048440 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:41,586,263...41,735,714
Ensembl chr19:41,588,696...41,732,104
JBrowse link
G Tlr2 toll-like receptor 2 involved_in IGI (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074
JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IDA (PMID:18986540) BHF-UCL PMID:18986540 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in IMP (PMID:21029865) UniProt PMID:21029865 NCBI chr11:68,819,726...68,847,760
Ensembl chr11:68,833,981...68,848,306
JBrowse link
G Neurod2 neurogenic differentiation 2 involved_in IDA (PMID:19900895) UniProt PMID:19900895 NCBI chr11:98,216,241...98,220,471
Ensembl chr11:98,216,241...98,220,474
JBrowse link
G Nfatc4 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 acts_upstream_of_or_within IMP (PMID:23407945) MGI PMID:23407945 NCBI chr14:56,062,252...56,071,400
Ensembl chr14:56,060,601...56,071,400
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgrmc1 progesterone receptor membrane component 1 involved_in ISO GO_Central GO_REF:0000096 NCBI chr  X:35,861,846...35,869,732
Ensembl chr  X:35,861,859...35,869,732
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO GO_Central GO_REF:0000096 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA (PMID:12796785) BHF-UCL PMID:12796785 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IMP (PMID:20534458) BHF-UCL PMID:20534458 NCBI chr18:16,721,934...16,942,303
Ensembl chr18:16,721,934...16,942,303
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IDA (PMID:20534458) BHF-UCL PMID:20534458 NCBI chr 5:19,431,787...20,909,790
Ensembl chr 5:19,432,034...20,909,790
JBrowse link
G Nrxn1 neurexin I involved_in IDA (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Nrxn2 neurexin II involved_in IDA (PMID:21424692) BHF-UCL PMID:21424692 NCBI chr19:6,468,786...6,583,247
Ensembl chr19:6,468,761...6,594,199
JBrowse link
neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg3l2 AFG3-like AAA ATPase 2 acts_upstream_of_or_within IMP (PMID:2917690) MGI PMID:2917690 NCBI chr18:67,537,830...67,582,277
Ensembl chr18:67,537,834...67,582,242
JBrowse link
G Agrn agrin acts_upstream_of_or_within
involved_in
IGI
IBA
(PMID:12165471) MGI
GO_Central
PMID:12165471 GO_REF:0000033 NCBI chr 4:156,249,747...156,281,997
Ensembl chr 4:156,249,747...156,281,945
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor acts_upstream_of_or_within IMP (PMID:16321985) MGI PMID:16321985 NCBI chr 1:59,201,915...59,276,390
Ensembl chr 1:59,202,085...59,276,390
JBrowse link
G Ank3 ankyrin 3, epithelial involved_in ISO
ISS
RGD
BHF-UCL
PMID:12657669 GO_REF:0000024 RGD:6767302 NCBI chr10:69,234,608...69,863,266
Ensembl chr10:69,234,603...69,863,268
JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit acts_upstream_of_or_within IMP (PMID:6692971), (PMID:6692972), (PMID:7286424) MGI PMID:6692971 PMID:6692972 PMID:7286424 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560
JBrowse link
G Cacna2d2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 acts_upstream_of_or_within IMP (PMID:17320843) MGI PMID:17320843 NCBI chr 9:107,276,948...107,406,545
Ensembl chr 9:107,276,811...107,406,542
JBrowse link
G Cacnb4 calcium channel, voltage-dependent, beta 4 subunit acts_upstream_of_or_within IMP (PMID:17320843) MGI PMID:17320843 NCBI chr 2:52,318,332...52,566,816
Ensembl chr 2:52,318,337...52,566,843
JBrowse link
G Cacng2 calcium channel, voltage-dependent, gamma subunit 2 acts_upstream_of_or_within IMP (PMID:17320843) MGI PMID:17320843 NCBI chr15:77,876,119...78,004,420
Ensembl chr15:77,875,948...78,004,228
JBrowse link
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr 2:73,393,625...73,410,682
Ensembl chr 2:73,393,559...73,410,682
JBrowse link
G Col4a1 collagen, type IV, alpha 1 acts_upstream_of_or_within IMP (PMID:17418794) MGI PMID:17418794 NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826
JBrowse link
G Col4a5 collagen, type IV, alpha 5 acts_upstream_of_or_within IMP (PMID:17418794) MGI PMID:17418794 NCBI chr  X:140,258,367...140,472,232
Ensembl chr  X:140,258,381...140,472,230
JBrowse link
G Dctn1 dynactin 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 6:83,142,702...83,177,103
Ensembl chr 6:83,142,902...83,177,099
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in IMP
ISO
(PMID:19038220) UniProt
GO_Central
PMID:19038220 GO_REF:0000119 NCBI chr16:4,501,934...4,525,559
Ensembl chr16:4,457,853...4,525,559
JBrowse link
G Dok7 docking protein 7 acts_upstream_of_or_within
involved_in
IGI
IBA
IDA
(PMID:16794080) MGI
GO_Central
PMID:16794080 GO_REF:0000033 NCBI chr 5:35,213,922...35,245,183
Ensembl chr 5:35,214,110...35,245,183
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within IGI (PMID:12165471) MGI PMID:12165471 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 acts_upstream_of_or_within IMP (PMID:10655525) MGI PMID:10655525 NCBI chr11:98,303,310...98,328,542
Ensembl chr11:98,303,296...98,328,542
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within IMP (PMID:17418794) MGI PMID:17418794 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Kalrn kalirin, RhoGEF kinase acts_upstream_of_or_within IMP (PMID:23116210) MGI PMID:23116210 NCBI chr16:33,789,443...34,393,647
Ensembl chr16:33,789,443...34,393,902
JBrowse link
G Ky kyphoscoliosis peptidase involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:11136708) GO_Central
MGI
PMID:11136708 GO_REF:0000033 NCBI chr 9:102,382,954...102,423,443
Ensembl chr 9:102,382,949...102,423,438
JBrowse link
G Lamb2 laminin, beta 2 acts_upstream_of_or_within IMP (PMID:17418794), (PMID:7885444) MGI PMID:7885444 PMID:17418794 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IDA
IMP
(PMID:23222475)
(PMID:19346129), (PMID:23222475)
MGI PMID:19346129 PMID:23222475 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323
JBrowse link
G Musk muscle, skeletal, receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISO
ISS
IGI
(PMID:12165471)
(PMID:16794080)
RGD
UniProt
GO_Central
MGI
PMID:7546737 PMID:12165471 PMID:16794080 GO_REF:0000024 GO_REF:0000119 RGD:633425 NCBI chr 4:58,285,742...58,377,848
Ensembl chr 4:58,285,962...58,374,303
JBrowse link
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:19345204) GO_Central
MGI
PMID:19345204 GO_REF:0000033 NCBI chr 9:72,569,613...72,657,133
Ensembl chr 9:72,569,628...72,657,134
JBrowse link
G Nedd4l neural precursor cell expressed, developmentally down-regulated gene 4-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:65,017,551...65,350,888
Ensembl chr18:65,020,776...65,350,899
JBrowse link
G P2rx2 purinergic receptor P2X, ligand-gated ion channel, 2 acts_upstream_of_or_within IMP (PMID:17706883) MGI PMID:17706883 NCBI chr 5:110,487,678...110,491,186
Ensembl chr 5:110,487,678...110,491,078
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within IGI (PMID:12165471) MGI PMID:12165471 NCBI chr 7:97,437,748...97,561,588
Ensembl chr 7:97,437,748...97,561,588
JBrowse link
G Pdzrn3 PDZ domain containing RING finger 3 involved_in IBA
IMP
(PMID:17576800) GO_Central
UniProt
PMID:17576800 GO_REF:0000033 NCBI chr 6:101,126,568...101,354,858
Ensembl chr 6:101,126,570...101,354,858
JBrowse link
G Ppfibp1 PTPRF interacting protein, binding protein 1 (liprin beta 1) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:146,788,107...146,933,523
Ensembl chr 6:146,789,985...146,933,523
JBrowse link
G Ppfibp2 PTPRF interacting protein, binding protein 2 (liprin beta 2) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:107,192,608...107,347,790
Ensembl chr 7:107,194,414...107,347,790
JBrowse link
G Rapsn receptor-associated protein of the synapse involved_in IMP (PMID:14622576)
(PMID:8653787)
MGI PMID:8653787 PMID:14622576 NCBI chr 2:90,864,594...90,876,074
Ensembl chr 2:90,865,965...90,876,074
JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 acts_upstream_of_or_within IMP (PMID:21187406) MGI PMID:21187406 NCBI chr 4:155,158,566...155,170,840
Ensembl chr 4:155,158,567...155,170,839
JBrowse link
G Snta1 syntrophin, acidic 1 acts_upstream_of_or_within IMP (PMID:10995443) MGI PMID:10995443 NCBI chr 2:154,218,234...154,250,004
Ensembl chr 2:154,218,233...154,250,019
JBrowse link
G Spg11 SPG11, spatacsin vesicle trafficking associated acts_upstream_of_or_within IMP (PMID:28237315) MGI PMID:28237315 NCBI chr 2:121,884,001...121,949,915
Ensembl chr 2:121,884,001...121,948,867
JBrowse link
G Sptbn4 spectrin beta, non-erythrocytic 4 acts_upstream_of_or_within IMP (PMID:20962009) MGI PMID:20962009 NCBI chr 7:27,055,808...27,147,128
Ensembl chr 7:27,055,808...27,147,111
JBrowse link
G Tnc tenascin C acts_upstream_of_or_within
involved_in
IMP (PMID:9593587) MGI
ComplexPortal
PMID:9593587 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252
JBrowse link
G Unc13a unc-13 homolog A acts_upstream_of_or_within IGI (PMID:15988013) MGI PMID:15988013 NCBI chr 8:72,079,356...72,124,418
Ensembl chr 8:72,077,061...72,124,401
JBrowse link
G Unc13b unc-13 homolog B acts_upstream_of_or_within IGI (PMID:15988013) MGI PMID:15988013 NCBI chr 4:43,046,193...43,264,873
Ensembl chr 4:43,058,953...43,264,871
JBrowse link
G Utrn utrophin ISO RGD PMID:9604203 RGD:634446 NCBI chr10:12,257,931...12,745,632
Ensembl chr10:12,257,932...12,745,109
JBrowse link
G Zc4h2 zinc finger, C4H2 domain containing involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:94,682,793...94,702,115
Ensembl chr  X:94,682,799...94,702,115
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein-like 1 involved_in IMP (PMID:28370195) MGI PMID:28370195 NCBI chr11:101,065,429...101,081,550
Ensembl chr11:101,061,349...101,081,550
JBrowse link
G Cntnap2 contactin associated protein-like 2 involved_in IMP (PMID:28370195) MGI PMID:28370195 NCBI chr 6:45,036,995...47,278,330
Ensembl chr 6:45,036,291...47,281,147
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within IMP (PMID:25014022) MGI PMID:25014022 NCBI chr11:63,019,808...63,050,373
Ensembl chr11:63,019,808...63,050,373
JBrowse link
neurotransmitter-gated ion channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within IDA (PMID:23911104) MGI PMID:23911104 NCBI chr 6:79,995,828...80,787,143
Ensembl chr 6:79,995,860...80,787,124
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within IMP
IGI
IDA
(PMID:29107521) MGI PMID:29107521 NCBI chr11:69,713,949...69,728,610
Ensembl chr11:69,713,948...69,728,610
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within IGI
IDA
IMP
(PMID:29107521) MGI PMID:29107521 NCBI chr 3:72,954,399...72,965,298
Ensembl chr 3:72,954,598...72,965,136
JBrowse link
NMDA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within_positive_effect ISO GO_Central GO_REF:0000119 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Htr1a 5-hydroxytryptamine (serotonin) receptor 1A involved_in ISO RGD
GO_Central
PMID:18442977 GO_REF:0000096 RGD:7241017 NCBI chr13:105,580,040...105,584,630
Ensembl chr13:105,580,147...105,584,630
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO
ISS
GO_Central
BHF-UCL
GO_REF:0000024 GO_REF:0000096 NCBI chr 3:25,475,972...26,387,504
Ensembl chr 3:25,480,379...26,386,609
JBrowse link
G Nrxn1 neurexin I involved_in IDA (PMID:15620359) BHF-UCL PMID:15620359 NCBI chr17:90,341,072...91,400,587
Ensembl chr17:90,341,059...91,400,499
JBrowse link
G Reln reelin involved_in IMP (PMID:21664258) CACAO PMID:21664258 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IMP (PMID:21558424) CACAO PMID:21558424 NCBI chr15:89,376,929...89,444,464
Ensembl chr15:89,383,826...89,444,464
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2, brain ISO RGD PMID:16687515 RGD:1599119 NCBI chr 3:126,715,256...127,293,996
Ensembl chr 3:126,715,261...127,292,999
JBrowse link
G Cd9 CD9 antigen involved_in IDA (PMID:14715942) UniProt PMID:14715942 NCBI chr 6:125,437,229...125,471,723
Ensembl chr 6:125,437,229...125,471,754
JBrowse link
G Cntnap1 contactin associated protein-like 1 involved_in IMP
ISO
(PMID:16687515)
(PMID:16551741), (PMID:19816196)
MGI
GO_Central
BHF-UCL
PMID:16551741 PMID:16687515 PMID:19816196 GO_REF:0000119 NCBI chr11:101,065,429...101,081,550
Ensembl chr11:101,061,349...101,081,550
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in IMP (PMID:21966409) BHF-UCL PMID:21966409 NCBI chr17:69,382,642...69,596,986
Ensembl chr17:69,382,678...69,596,984
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within IMP (PMID:19270340) MGI PMID:19270340 NCBI chr 8:125,589,772...125,616,796
Ensembl chr 8:125,589,772...125,616,796
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
IMP (PMID:20371806)
(PMID:19185024)
(PMID:16337912)
MGI
UniProt
PMID:16337912 PMID:19185024 PMID:20371806 NCBI chr 1:132,492,428...132,669,567
Ensembl chr 1:132,492,428...132,669,535
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within IMP (PMID:16436605) MGI PMID:16436605 NCBI chr11:63,019,808...63,050,373
Ensembl chr11:63,019,808...63,050,373
JBrowse link
G Ugt8a UDP galactosyltransferase 8A involved_in IMP (PMID:16551741) BHF-UCL PMID:16551741 NCBI chr 3:125,655,071...125,732,301
Ensembl chr 3:125,658,920...125,732,268
JBrowse link
paranodal junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein-like 1 involved_in IMP (PMID:16687515) MGI PMID:16687515 NCBI chr11:101,065,429...101,081,550
Ensembl chr11:101,061,349...101,081,550
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in IMP (PMID:21632923) MGI PMID:21632923 NCBI chr17:69,382,642...69,596,986
Ensembl chr17:69,382,678...69,596,984
JBrowse link
G Whrn whirlin involved_in IMP (PMID:24011083) CACAO PMID:24011083 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228
JBrowse link
positive regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 involved_in IBA
ISO
IMP
(PMID:25978380) GO_Central
CAFA
PMID:25978380 GO_REF:0000033 GO_REF:0000119 NCBI chr 5:34,731,008...34,789,652
Ensembl chr 5:34,731,008...34,789,652
JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 9:110,214,152...110,237,278
Ensembl chr 9:110,214,150...110,237,281
JBrowse link
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO GO_Central GO_REF:0000096 NCBI chr11:69,908,029...69,938,107
Ensembl chr11:69,907,768...69,938,348
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 6:91,738,433...91,820,884
Ensembl chr 6:91,738,490...91,804,231
JBrowse link
G Snx27 sorting nexin family member 27 involved_in ISO RGD
GO_Central
PMID:25071192 GO_REF:0000096 RGD:13508620 NCBI chr 3:94,404,849...94,490,023
Ensembl chr 3:94,404,851...94,490,023
JBrowse link
G Ssh1 slingshot protein phosphatase 1 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:20442266 GO_REF:0000096 GO_REF:0000107 RGD:11535133 NCBI chr 5:114,075,155...114,131,864
Ensembl chr 5:114,075,155...114,131,955
JBrowse link
G Zdhhc2 zinc finger, DHHC domain containing 2 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr 8:40,876,526...40,946,178
Ensembl chr 8:40,876,856...40,963,309
JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor, type II-like 1 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr15:101,026,403...101,043,217
Ensembl chr15:101,026,403...101,043,217
JBrowse link
G Cldn1 claudin 1 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:22684624 GO_REF:0000096 GO_REF:0000107 RGD:11341733 NCBI chr16:26,175,395...26,190,589
Ensembl chr16:26,175,392...26,190,591
JBrowse link
G Cldn3 claudin 3 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326
JBrowse link
G Cldn5 claudin 5 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr16:18,595,597...18,597,012
Ensembl chr16:18,595,597...18,597,012
JBrowse link
G Dsg3 desmoglein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr18:20,643,331...20,674,367
Ensembl chr18:20,643,331...20,680,516
JBrowse link
G Epha2 Eph receptor A2 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 4:141,028,532...141,056,695
Ensembl chr 4:141,028,551...141,056,695
JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) AgBase PMID:25050009 NCBI chr 2:62,304,874...62,313,997
Ensembl chr 2:62,304,874...62,313,994
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr14:33,662,996...33,669,155
Ensembl chr14:33,662,996...33,669,155
JBrowse link
G Il17a interleukin 17A involved_in IMP (PMID:26431948) UniProt PMID:26431948 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720
JBrowse link
G Nphp1 nephronophthisis 1 (juvenile) homolog (human) involved_in ISO GO_Central GO_REF:0000119 NCBI chr 2:127,582,652...127,630,833
Ensembl chr 2:127,582,652...127,630,817
JBrowse link
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) involved_in IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 4:152,561,163...152,647,641
Ensembl chr 4:152,561,163...152,647,640
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791
JBrowse link
positive regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 NCBI chr 4:119,112,638...119,119,635
Ensembl chr 4:119,112,611...119,119,635
JBrowse link
G Cldn3 claudin 3 involved_in ISO GO_Central GO_REF:0000119 NCBI chr 5:135,015,068...135,016,330
Ensembl chr 5:135,015,068...135,016,326
JBrowse link
G Crb3 crumbs family member 3 involved_in IMP (PMID:21145499) UniProt PMID:21145499 NCBI chr17:57,368,583...57,372,920
Ensembl chr17:57,366,105...57,372,918
JBrowse link
G Flot1 flotillin 1 involved_in ISO
IBA
IMP
(PMID:24046456) GO_Central
UniProt
PMID:24046456 GO_REF:0000033 GO_REF:0000119 NCBI chr17:36,134,243...36,143,674
Ensembl chr17:36,134,122...36,143,683
JBrowse link
positive regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
IEA
ISO
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:30206770 RGD:405650589 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218
JBrowse link
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) involved_in ISO GO_Central GO_REF:0000096 NCBI chr 2:25,181,189...25,209,199
Ensembl chr 2:25,181,193...25,209,199
JBrowse link
G Ins1 insulin I involved_in ISO GO_Central GO_REF:0000119 NCBI chr19:52,252,735...52,253,453
Ensembl chr19:52,252,735...52,253,914
JBrowse link
G Ins2 insulin II involved_in ISO GO_Central GO_REF:0000119 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118
JBrowse link
G Nedd9