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ONTOLOGY REPORT - ANNOTATIONS


Term:cell junction organization
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Accession:GO:0034330 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.
Synonyms:exact_synonym: cell junction assembly and maintenance;   cell junction organisation
 related_synonym: cell junction biogenesis



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adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in IMP (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902
JBrowse link
G CTNNB1 catenin beta 1 involved_in IMP (PMID:20086044), (PMID:20123964) BHF-UCL PMID:20086044 PMID:20123964 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G DSG3 desmoglein 3 involved_in IMP (PMID:31835537) UniProt PMID:31835537 NCBI chr18:31,447,741...31,478,702
Ensembl chr18:31,447,741...31,478,702
JBrowse link
G FER FER tyrosine kinase involved_in ISO
IEA
RGD
Ensembl
PMID:12700184 GO_REF:0000107 RGD:2291909 NCBI chr 5:108,747,897...109,196,841
Ensembl chr 5:108,747,841...109,196,841
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869
JBrowse link
G JAM3 junctional adhesion molecule 3 involved_in IMP (PMID:19060272) ARUK-UCL PMID:19060272 NCBI chr11:134,069,072...134,152,001
Ensembl chr11:134,069,071...134,152,001
JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr 3:196,739,857...196,832,647
Ensembl chr 3:196,739,857...196,832,647
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in TAS (PMID:19889969) UniProt PMID:19889969 NCBI chr19:3,630,183...3,700,468
Ensembl chr19:3,630,183...3,700,468
JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in IEA
IDA
(PMID:18097473) Ensembl
UniProt
PMID:18097473 GO_REF:0000107 NCBI chr17:42,761,227...42,763,041
Ensembl chr17:42,758,447...42,763,041
JBrowse link
G SMAD7 SMAD family member 7 involved_in IMP (PMID:18593713) BHF-UCL PMID:18593713 NCBI chr18:48,919,853...48,950,965
Ensembl chr18:48,919,853...48,950,965
JBrowse link
G TBCD tubulin folding cofactor D involved_in ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr17:82,752,065...82,945,914
Ensembl chr17:82,752,042...82,945,914
JBrowse link
G VCL vinculin involved_in IMP (PMID:20086044) BHF-UCL PMID:20086044 NCBI chr10:73,998,116...74,121,363
Ensembl chr10:73,995,193...74,121,363
JBrowse link
G ZNF703 zinc finger protein 703 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:37,695,782...37,700,019
Ensembl chr 8:37,695,782...37,700,019
JBrowse link
adherens junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FER FER tyrosine kinase involved_in ISO
IEA
RGD
Ensembl
PMID:12700184 GO_REF:0000107 RGD:2291909 NCBI chr 5:108,747,897...109,196,841
Ensembl chr 5:108,747,841...109,196,841
JBrowse link
adherens junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) MGI PMID:25100583 NCBI chr 6:167,826,564...167,972,023
Ensembl chr 6:167,826,893...167,972,023
JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in IMP
IEA
(PMID:28799653) ARUK-UCL
Ensembl
PMID:28799653 GO_REF:0000107 NCBI chr14:52,857,273...52,951,050
Ensembl chr14:52,857,268...52,952,435
JBrowse link
G INAVA innate immunity activator involved_in IMP
IBA
IEA
(PMID:29420262) UniProt
GO_Central
Ensembl
PMID:29420262 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:200,891,531...200,915,742
Ensembl chr 1:200,891,048...200,915,742
JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21406566) GO_Central
MGI
PMID:21406566 GO_REF:0000033 NCBI chr 8:124,550,784...124,728,473
Ensembl chr 8:124,550,784...124,728,473
JBrowse link
G PKP2 plakophilin 2 ISO RGD PMID:18261826 RGD:6784508 NCBI chr12:32,790,755...32,896,777
Ensembl chr12:32,790,745...32,896,798
JBrowse link
G TJP1 tight junction protein 1 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr15:29,699,367...29,969,049
Ensembl chr15:29,699,367...29,968,915
JBrowse link
adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:58,588,809...58,749,707
Ensembl chr15:58,588,809...58,749,791
JBrowse link
G CDC42 cell division cycle 42 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16892058) Ensembl
MGI
PMID:16892058 GO_REF:0000107 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360
JBrowse link
G CDH1 cadherin 1 involved_in IMP
IBA
(PMID:21724833) UniProt
GO_Central
PMID:21724833 GO_REF:0000033 NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G CDH10 cadherin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:24,487,100...24,644,978
Ensembl chr 5:24,487,100...24,644,978
JBrowse link
G CDH11 cadherin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:64,943,753...65,123,744
Ensembl chr16:64,943,753...65,126,112
JBrowse link
G CDH12 cadherin 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:21,750,673...22,853,344
Ensembl chr 5:21,750,673...22,853,344
JBrowse link
G CDH13 cadherin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:82,626,969...83,800,640
Ensembl chr16:82,626,965...83,800,640
JBrowse link
G CDH15 cadherin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:89,171,748...89,195,492
Ensembl chr16:89,171,748...89,195,492
JBrowse link
G CDH17 cadherin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:94,127,162...94,217,278
Ensembl chr 8:94,127,162...94,217,303
JBrowse link
G CDH18 cadherin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:19,471,296...20,575,713
Ensembl chr 5:19,471,296...20,575,873
JBrowse link
G CDH19 cadherin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:66,501,083...66,604,090
Ensembl chr18:66,501,083...66,604,138
JBrowse link
G CDH2 cadherin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:27,932,879...28,177,130
Ensembl chr18:27,932,879...28,177,946
JBrowse link
G CDH20 cadherin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:61,333,430...61,555,779
Ensembl chr18:61,333,430...61,555,779
JBrowse link
G CDH22 cadherin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:46,173,739...46,308,498
Ensembl chr20:46,173,739...46,308,498
JBrowse link
G CDH24 cadherin 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:23,047,067...23,057,520
Ensembl chr14:23,047,062...23,057,538
JBrowse link
G CDH26 cadherin 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:59,958,423...60,035,934
Ensembl chr20:59,958,423...60,034,011
JBrowse link
G CDH3 cadherin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:68,645,310...68,733,771
Ensembl chr16:68,636,189...68,727,468
JBrowse link
G CDH4 cadherin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:61,252,261...61,940,617
Ensembl chr20:61,252,261...61,940,617
JBrowse link
G CDH5 cadherin 5 involved_in IDA
IBA
(PMID:26598555) ARUK-UCL
GO_Central
PMID:26598555 GO_REF:0000033 NCBI chr16:66,366,691...66,404,784
Ensembl chr16:66,366,690...66,404,784
JBrowse link
G CDH6 cadherin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:31,193,686...31,329,146
Ensembl chr 5:31,193,686...31,329,146
JBrowse link
G CDH7 cadherin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:65,750,252...65,890,337
Ensembl chr18:65,750,252...65,890,337
JBrowse link
G CDH8 cadherin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:61,647,250...62,036,438
Ensembl chr16:61,647,242...62,037,035
JBrowse link
G CDH9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:26,880,597...27,038,586
Ensembl chr 5:26,880,597...27,121,150
JBrowse link
G CDHR3 cadherin related family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:105,963,264...106,036,432
Ensembl chr 7:105,876,796...106,036,432
JBrowse link
G CSK C-terminal Src kinase involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:15389520 GO_REF:0000033 GO_REF:0000107 RGD:5134367 NCBI chr15:74,782,080...74,803,197
Ensembl chr15:74,782,080...74,803,197
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19129494) Ensembl
MGI
PMID:19129494 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G DSP desmoplakin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11781569) Ensembl
MGI
PMID:11781569 GO_REF:0000107 NCBI chr 6:7,541,671...7,586,714
Ensembl chr 6:7,541,326...7,586,717
JBrowse link
G EFNB2 ephrin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662
JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:221,418,027...221,574,202
Ensembl chr 2:221,418,027...221,574,202
JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17589506) Ensembl
MGI
PMID:17589506 GO_REF:0000107 NCBI chr14:73,275,216...73,458,546
Ensembl chr14:73,275,107...73,466,167
JBrowse link
G NUMBL NUMB like endocytic adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17589506) Ensembl
MGI
PMID:17589506 GO_REF:0000107 NCBI chr19:40,665,905...40,690,651
Ensembl chr19:40,665,905...40,690,972
JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:143,915,153...143,976,745
Ensembl chr 8:143,915,153...143,976,734
JBrowse link
G SPECC1L sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (PMID:26787558) MGI PMID:26787558 NCBI chr22:24,270,831...24,417,738
Ensembl chr22:24,270,817...24,417,739
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO
IEA
RGD
Ensembl
PMID:15389520 GO_REF:0000107 RGD:5134367 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within_positive_effect IDA (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CHRDL1 chordin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:110,673,856...110,795,817
Ensembl chr  X:110,673,856...110,795,819
JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in TAS
IBA
ISS
(PMID:19914352) BHF-UCL
GO_Central
PMID:19914352 GO_REF:0000024 GO_REF:0000033 NCBI chr17:7,187,187...7,220,050
Ensembl chr17:7,187,187...7,219,836
JBrowse link
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chr 2:76,747,685...77,522,376
Ensembl chr 2:76,747,685...77,593,319
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,408...50,733,212
JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN19 claudin 19 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15883201) Ensembl
MGI
PMID:15883201 GO_REF:0000107 NCBI chr 1:42,733,093...42,740,236
Ensembl chr 1:42,733,093...42,740,254
JBrowse link
G CTNNA1 catenin alpha 1 involved_in
acts_upstream_of_or_within
NAS
ISO
IEA
(PMID:9700171)
(PMID:16543460)
(PMID:22411810)
UniProt
MGI
Ensembl
PMID:9700171 PMID:16543460 PMID:22411810 GO_REF:0000107 NCBI chr 5:138,753,425...138,935,034
Ensembl chr 5:138,610,967...138,935,034
JBrowse link
G FBF1 Fas binding factor 1 involved_in IMP (PMID:18838552) UniProt PMID:18838552 NCBI chr17:75,909,574...75,941,042
Ensembl chr17:75,909,574...75,941,140
JBrowse link
G PKN2 protein kinase N2 involved_in IMP
IEA
(PMID:20974804) UniProt
Ensembl
PMID:20974804 GO_REF:0000107 NCBI chr 1:88,684,273...88,836,255
Ensembl chr 1:88,684,222...88,836,255
JBrowse link
G RHOA ras homolog family member A involved_in IEA
IMP
(PMID:20974804) Ensembl
UniProt
PMID:20974804 GO_REF:0000107 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G RHOC ras homolog family member C involved_in IDA
IEA
(PMID:20974804) UniProt
Ensembl
PMID:20974804 GO_REF:0000107 NCBI chr 1:112,701,131...112,707,408
Ensembl chr 1:112,701,127...112,707,434
JBrowse link
G VCL vinculin involved_in IMP (PMID:9700171) UniProt PMID:9700171 NCBI chr10:73,998,116...74,121,363
Ensembl chr10:73,995,193...74,121,363
JBrowse link
G WDR1 WD repeat domain 1 involved_in IDA (PMID:25792565) UniProt PMID:25792565 NCBI chr 4:10,074,339...10,116,799
Ensembl chr 4:10,068,089...10,116,972
JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN4 actinin alpha 4 involved_in ISO (PMID:18332111) UniProt PMID:18332111 NCBI chr19:38,647,649...38,731,589
Ensembl chr19:38,647,649...38,731,589
JBrowse link
G AFDN afadin, adherens junction formation factor involved_in IMP (PMID:27815408) ARUK-UCL PMID:27815408 NCBI chr 6:167,826,564...167,972,023
Ensembl chr 6:167,826,893...167,972,023
JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (PMID:17403930) UniProt PMID:17403930 NCBI chr17:8,072,636...8,087,716
Ensembl chr17:8,072,636...8,087,716
JBrowse link
G ALOXE3 arachidonate epidermal lipoxygenase 3 NOT|involved_in ISO (PMID:22832496) UniProt PMID:22832496 NCBI chr17:8,095,900...8,118,916
Ensembl chr17:8,095,900...8,119,047
JBrowse link
G APC APC regulator of WNT signaling pathway involved_in NAS (PMID:18502210) UniProt PMID:18502210 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,518...112,846,239
JBrowse link
G ARL2 ARF like GTPase 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:65,014,160...65,022,184
Ensembl chr11:65,014,160...65,022,184
JBrowse link
G CDH1 cadherin 1 acts_upstream_of_or_within ISO (PMID:15775979) MGI PMID:15775979 NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G CDH5 cadherin 5 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr16:66,366,691...66,404,784
Ensembl chr16:66,366,690...66,404,784
JBrowse link
G CGN cingulin acts_upstream_of_or_within ISO (PMID:24385485) MGI PMID:24385485 NCBI chr 1:151,510,170...151,538,692
Ensembl chr 1:151,510,510...151,538,692
JBrowse link
G CLDN1 claudin 1 involved_in IMP
IBA
(PMID:25849148), (PMID:26607202) ARUK-UCL
GO_Central
PMID:25849148 PMID:26607202 GO_REF:0000033 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CLDN10 claudin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:95,433,755...95,579,759
Ensembl chr13:95,433,604...95,579,759
JBrowse link
G CLDN11 claudin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:170,418,868...170,434,691
Ensembl chr 3:170,418,868...170,454,733
JBrowse link
G CLDN14 claudin 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:36,460,621...36,576,569
Ensembl chr21:36,460,621...36,576,569
JBrowse link
G CLDN15 claudin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:101,232,094...101,238,820
Ensembl chr 7:101,232,092...101,238,820
JBrowse link
G CLDN16 claudin 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:190,290,361...190,412,138
Ensembl chr 3:190,322,541...190,412,138
JBrowse link
G CLDN17 claudin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:30,165,565...30,166,805
Ensembl chr21:30,165,565...30,166,805
JBrowse link
G CLDN18 claudin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:137,998,816...138,033,649
Ensembl chr 3:137,998,735...138,033,655
JBrowse link
G CLDN19 claudin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:42,733,093...42,740,236
Ensembl chr 1:42,733,093...42,740,254
JBrowse link
G CLDN2 claudin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:106,900,164...106,930,861
Ensembl chr  X:106,900,164...106,930,861
JBrowse link
G CLDN20 claudin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:155,264,013...155,276,548
Ensembl chr 6:155,264,013...155,276,548
JBrowse link
G CLDN22 claudin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:183,318,100...183,320,276
Ensembl chr 4:183,318,100...183,320,276
JBrowse link
G CLDN23 claudin 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:8,701,937...8,704,096
Ensembl chr 8:8,701,937...8,704,096
JBrowse link
G CLDN24 claudin 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:183,321,764...183,322,426
Ensembl chr 4:183,321,764...183,322,426
JBrowse link
G CLDN25 claudin 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:113,779,796...113,780,485
Ensembl chr11:113,779,796...113,780,485
JBrowse link
G CLDN3 claudin 3 involved_in IBA
IMP
(PMID:20655293), (PMID:25849148) GO_Central
UniProt
PMID:20655293 PMID:25849148 GO_REF:0000033 NCBI chr 7:73,768,997...73,770,270
Ensembl chr 7:73,768,997...73,770,270
JBrowse link
G CLDN34 claudin 34 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:9,967,358...9,968,352
Ensembl chr  X:9,967,358...9,968,352
JBrowse link
G CLDN4 claudin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:73,830,996...73,832,690
Ensembl chr 7:73,799,542...73,832,690
JBrowse link
G CLDN5 claudin 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:19,523,024...19,525,337
Ensembl chr22:19,523,024...19,527,545
JBrowse link
G CLDN6 claudin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:3,014,712...3,018,183
Ensembl chr16:3,014,712...3,020,071
JBrowse link
G CLDN7 claudin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:7,259,903...7,263,213
Ensembl chr17:7,259,903...7,263,983
JBrowse link
G CLDN8 claudin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:30,214,006...30,216,097
Ensembl chr21:30,214,006...30,216,097
JBrowse link
G CLDN9 claudin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:3,012,923...3,014,505
Ensembl chr16:3,012,923...3,014,505
JBrowse link
G CTNNB1 catenin beta 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IDA (PMID:17332497) BHF-UCL PMID:17332497 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G ECT2 epithelial cell transforming 2 involved_in IMP (PMID:15254234) UniProt PMID:15254234 NCBI chr 3:172,750,726...172,829,265
Ensembl chr 3:172,750,682...172,821,474
JBrowse link
G ESAM endothelial cell adhesion molecule involved_in IMP (PMID:26607202) ARUK-UCL PMID:26607202 NCBI chr11:124,753,126...124,762,290
Ensembl chr11:124,752,583...124,762,290
JBrowse link
G FRMPD2 FERM and PDZ domain containing 2 involved_in IMP
IBA
(PMID:19706687) UniProt
GO_Central
PMID:19706687 GO_REF:0000033 NCBI chr10:48,156,559...48,274,895
Ensembl chr10:48,153,088...48,274,696
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in IMP (PMID:25152456) UniProt PMID:25152456 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726
JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:18579774 RGD:2325293 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792
JBrowse link
G MARVELD2 MARVEL domain containing 2 involved_in IMP
IBA
(PMID:20164257), (PMID:23073616) UniProt
GO_Central
PMID:20164257 PMID:23073616 GO_REF:0000033 NCBI chr 5:69,415,116...69,444,330
Ensembl chr 5:69,415,065...69,444,330
JBrowse link
G MARVELD3 MARVEL domain containing 3 involved_in IMP (PMID:20164257) UniProt PMID:20164257 NCBI chr16:71,626,184...71,641,965
Ensembl chr16:71,626,161...71,642,114
JBrowse link
G MICALL2 MICAL like 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,434,359...1,459,470
Ensembl chr 7:1,428,465...1,459,470
JBrowse link
G MPP7 MAGUK p55 scaffold protein 7 involved_in IDA (PMID:17332497) BHF-UCL PMID:17332497 NCBI chr10:28,050,993...28,335,203
Ensembl chr10:28,050,993...28,334,486
JBrowse link
G MTDH metadherin ISO RGD PMID:15383321 RGD:1359738 NCBI chr 8:97,644,184...97,730,260
Ensembl chr 8:97,644,184...97,730,260
JBrowse link
G OCEL1 occludin/ELL domain containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:17,226,226...17,229,219
Ensembl chr19:17,226,213...17,229,219
JBrowse link
G OCLN occludin involved_in IMP
IBA
IEA
(PMID:20164257), (PMID:26607202) ARUK-UCL
GO_Central
InterPro
PMID:20164257 PMID:26607202 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:69,492,547...69,558,104
Ensembl chr 5:69,492,292...69,558,104
JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 involved_in IMP (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chr 3:196,739,857...196,832,647
Ensembl chr 3:196,739,857...196,832,647
JBrowse link
G PARD3 par-3 family cell polarity regulator involved_in ISS UniProt GO_REF:0000024 NCBI chr10:34,109,561...34,815,296
Ensembl chr10:34,109,560...34,815,325
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:33,798,630...33,869,703
Ensembl chr 3:33,798,571...33,869,707
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 involved_in IMP (PMID:26607202) ARUK-UCL PMID:26607202 NCBI chr17:64,319,415...64,390,860
Ensembl chr17:64,319,415...64,413,776
JBrowse link
G POF1B POF1B actin binding protein involved_in IMP
IBA
(PMID:21940798) UniProt
GO_Central
PMID:21940798 GO_REF:0000033 NCBI chr  X:85,277,396...85,379,665
Ensembl chr  X:85,277,396...85,379,717
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in IMP (PMID:12058051), (PMID:15096524) UniProt PMID:12058051 PMID:15096524 NCBI chr 1:153,981,650...153,990,708
Ensembl chr 1:153,981,617...153,986,358
JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in IDA
IEA
(PMID:18097473) UniProt
Ensembl
PMID:18097473 GO_REF:0000107 NCBI chr17:42,761,227...42,763,041
Ensembl chr17:42,758,447...42,763,041
JBrowse link
G SLC39A9 solute carrier family 39 member 9 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:69,398,384...69,462,390
Ensembl chr14:69,398,015...69,462,390
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20047077) Ensembl
MGI
PMID:20047077 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STRN striatin involved_in NAS (PMID:18502210) UniProt PMID:18502210 NCBI chr 2:36,837,698...36,966,536
Ensembl chr 2:36,837,698...36,966,536
JBrowse link
G TBCD tubulin folding cofactor D involved_in ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr17:82,752,065...82,945,914
Ensembl chr17:82,752,042...82,945,914
JBrowse link
G TJP1 tight junction protein 1 involved_in ISO (PMID:8636221) UniProt PMID:8636221 NCBI chr15:29,699,367...29,969,049
Ensembl chr15:29,699,367...29,968,915
JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17767158) Ensembl
MGI
PMID:17767158 GO_REF:0000107 NCBI chr11:76,186,325...76,210,761
Ensembl chr11:76,186,325...76,210,736
JBrowse link
cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 involved_in IMP (PMID:22891260) UniProt PMID:22891260 NCBI chr 1:112,619,832...112,671,616
Ensembl chr 1:112,619,805...112,671,616
JBrowse link
G CDC42 cell division cycle 42 involved_in IMP (PMID:22891260) UniProt PMID:22891260 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360
JBrowse link
G CLDN19 claudin 19 involved_in IMP (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 1:42,733,093...42,740,236
Ensembl chr 1:42,733,093...42,740,254
JBrowse link
G CLDN3 claudin 3 involved_in IMP (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 7:73,768,997...73,770,270
Ensembl chr 7:73,768,997...73,770,270
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in IMP (PMID:25152456) UniProt PMID:25152456 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726
JBrowse link
G MYO9A myosin IXA involved_in IMP (PMID:22891260) UniProt PMID:22891260 NCBI chr15:71,822,291...72,118,600
Ensembl chr15:71,822,291...72,118,577
JBrowse link
G OPHN1 oligophrenin 1 involved_in IMP (PMID:22891260) UniProt PMID:22891260 NCBI chr  X:68,042,344...68,433,841
Ensembl chr  X:67,949,349...68,433,913
JBrowse link
G RHOA ras homolog family member A involved_in IMP (PMID:22891260) UniProt PMID:22891260 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G SH3BP1 SH3 domain binding protein 1 involved_in IMP (PMID:22891260) UniProt PMID:22891260 NCBI chr22:37,639,669...37,656,117
Ensembl chr22:37,634,654...37,656,117
JBrowse link
G VMP1 vacuole membrane protein 1 involved_in IMP (PMID:17724469) UniProt PMID:17724469 NCBI chr17:59,707,654...59,842,255
Ensembl chr17:59,707,192...59,842,255
JBrowse link
cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN1 claudin 1 involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CLDN3 claudin 3 involved_in IEA
ISS
Ensembl
ARUK-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:73,768,997...73,770,270
Ensembl chr 7:73,768,997...73,770,270
JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin involved_in TAS (PMID:16043488) UniProt PMID:16043488 NCBI chr  X:112,774,877...112,840,831
Ensembl chr  X:112,774,503...112,840,831
JBrowse link
G CDH1 cadherin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G CDH10 cadherin 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:24,487,100...24,644,978
Ensembl chr 5:24,487,100...24,644,978
JBrowse link
G CDH11 cadherin 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:64,943,753...65,123,744
Ensembl chr16:64,943,753...65,126,112
JBrowse link
G CDH12 cadherin 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:21,750,673...22,853,344
Ensembl chr 5:21,750,673...22,853,344
JBrowse link
G CDH13 cadherin 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:82,626,969...83,800,640
Ensembl chr16:82,626,965...83,800,640
JBrowse link
G CDH15 cadherin 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:89,171,748...89,195,492
Ensembl chr16:89,171,748...89,195,492
JBrowse link
G CDH17 cadherin 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:94,127,162...94,217,278
Ensembl chr 8:94,127,162...94,217,303
JBrowse link
G CDH18 cadherin 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:19,471,296...20,575,713
Ensembl chr 5:19,471,296...20,575,873
JBrowse link
G CDH19 cadherin 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:66,501,083...66,604,090
Ensembl chr18:66,501,083...66,604,138
JBrowse link
G CDH2 cadherin 2 involved_in IEA
IBA
ISS
Ensembl
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:27,932,879...28,177,130
Ensembl chr18:27,932,879...28,177,946
JBrowse link
G CDH20 cadherin 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:61,333,430...61,555,779
Ensembl chr18:61,333,430...61,555,779
JBrowse link
G CDH22 cadherin 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:46,173,739...46,308,498
Ensembl chr20:46,173,739...46,308,498
JBrowse link
G CDH24 cadherin 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:23,047,067...23,057,520
Ensembl chr14:23,047,062...23,057,538
JBrowse link
G CDH26 cadherin 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:59,958,423...60,035,934
Ensembl chr20:59,958,423...60,034,011
JBrowse link
G CDH3 cadherin 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:68,645,310...68,733,771
Ensembl chr16:68,636,189...68,727,468
JBrowse link
G CDH4 cadherin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:61,252,261...61,940,617
Ensembl chr20:61,252,261...61,940,617
JBrowse link
G CDH5 cadherin 5 involved_in IMP
IBA
(PMID:23288152) UniProt
GO_Central
PMID:23288152 GO_REF:0000033 NCBI chr16:66,366,691...66,404,784
Ensembl chr16:66,366,690...66,404,784
JBrowse link
G CDH6 cadherin 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:31,193,686...31,329,146
Ensembl chr 5:31,193,686...31,329,146
JBrowse link
G CDH7 cadherin 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:65,750,252...65,890,337
Ensembl chr18:65,750,252...65,890,337
JBrowse link
G CDH8 cadherin 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:61,647,250...62,036,438
Ensembl chr16:61,647,242...62,037,035
JBrowse link
G CDH9 cadherin 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:26,880,597...27,038,586
Ensembl chr 5:26,880,597...27,121,150
JBrowse link
G CDHR3 cadherin related family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:105,963,264...106,036,432
Ensembl chr 7:105,876,796...106,036,432
JBrowse link
G CLDN5 claudin 5 involved_in IMP (PMID:23288152) UniProt PMID:23288152 NCBI chr22:19,523,024...19,525,337
Ensembl chr22:19,523,024...19,527,545
JBrowse link
G DSG1 desmoglein 1 involved_in NAS (PMID:12485422) UniProt PMID:12485422 NCBI chr18:31,318,160...31,359,246
Ensembl chr18:31,318,160...31,359,246
JBrowse link
G FLCN folliculin involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:17,212,212...17,237,330
Ensembl chr17:17,212,212...17,237,188
JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in IDA (PMID:9571235) UniProt PMID:9571235 NCBI chr 7:5,592,816...5,606,655
Ensembl chr 7:5,592,816...5,606,655
JBrowse link
G GJA4 gap junction protein alpha 4 involved_in TAS (PMID:7680674) PINC PMID:7680674 NCBI chr 1:34,792,999...34,795,747
Ensembl chr 1:34,792,999...34,795,747
JBrowse link
G GJC1 gap junction protein gamma 1 involved_in TAS (PMID:7966354) PINC PMID:7966354 NCBI chr17:44,794,104...44,831,364
Ensembl chr17:44,798,448...44,830,816
JBrowse link
G HDAC7 histone deacetylase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16873063) Ensembl
MGI
PMID:16873063 GO_REF:0000107 NCBI chr12:47,782,722...47,821,344
Ensembl chr12:47,782,722...47,833,132
JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in NAS (PMID:2584203) UniProt PMID:2584203 NCBI chr19:51,379,909...51,387,974
Ensembl chr19:51,379,909...51,387,974
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414
JBrowse link
G PARD6B par-6 family cell polarity regulator beta involved_in TAS (PMID:12545177) UniProt PMID:12545177 NCBI chr20:50,731,580...50,753,741
Ensembl chr20:50,731,580...50,756,795
JBrowse link
G PKP4 plakophilin 4 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:158,456,952...158,681,429
Ensembl chr 2:158,456,952...158,682,879
JBrowse link
G TJP1 tight junction protein 1 involved_in TAS (PMID:8486731) PINC PMID:8486731 NCBI chr15:29,699,367...29,969,049
Ensembl chr15:29,699,367...29,968,915
JBrowse link
G TLN1 talin 1 involved_in TAS (PMID:15494027) UniProt PMID:15494027 NCBI chr 9:35,696,948...35,732,195
Ensembl chr 9:35,696,948...35,732,195
JBrowse link
G TLN2 talin 2 involved_in TAS (PMID:15494027) UniProt PMID:15494027 NCBI chr15:62,390,550...62,844,631
Ensembl chr15:62,390,526...62,844,631
JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:109,783,087...109,833,398
Ensembl chr12:109,783,087...109,833,406
JBrowse link
cell-cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD177 CD177 molecule involved_in IMP
IBA
(PMID:23202369) UniProt
GO_Central
PMID:23202369 GO_REF:0000033 NCBI chr19:43,353,686...43,366,081
Ensembl chr19:43,353,686...43,363,172
JBrowse link
G CLDN3 claudin 3 involved_in IDA (PMID:36008380) UniProt PMID:36008380 NCBI chr 7:73,768,997...73,770,270
Ensembl chr 7:73,768,997...73,770,270
JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IMP (PMID:15117969) UniProt PMID:15117969 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G F2R coagulation factor II thrombin receptor involved_in IMP (PMID:23202369) UniProt PMID:23202369 NCBI chr 5:76,716,126...76,735,770
Ensembl chr 5:76,716,126...76,735,770
JBrowse link
G F2RL1 F2R like trypsin receptor 1 involved_in IMP (PMID:23202369) UniProt PMID:23202369 NCBI chr 5:76,819,030...76,835,315
Ensembl chr 5:76,818,933...76,835,315
JBrowse link
G KIRREL1 kirre like nephrin family adhesion molecule 1 involved_in IMP (PMID:31472902) UniProt PMID:31472902 NCBI chr 1:157,993,645...158,100,262
Ensembl chr 1:157,993,273...158,100,262
JBrowse link
G MPZ myelin protein zero acts_upstream_of_or_within ISO (PMID:11749037) MGI PMID:11749037 NCBI chr 1:161,303,600...161,309,968
Ensembl chr 1:161,304,735...161,309,968
JBrowse link
G MYADM myeloid associated differentiation marker NOT|involved_in IMP (PMID:23264465) UniProt PMID:23264465 NCBI chr19:53,865,628...53,876,435
Ensembl chr19:53,864,763...53,878,125
JBrowse link
G NLGN2 neuroligin 2 involved_in NAS (PMID:10892652) UniProt PMID:10892652 NCBI chr17:7,404,653...7,419,860
Ensembl chr17:7,404,874...7,419,860
JBrowse link
G PARD6A par-6 family cell polarity regulator alpha involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr16:67,660,960...67,662,774
Ensembl chr16:67,660,946...67,662,774
JBrowse link
G PRTN3 proteinase 3 involved_in IMP (PMID:23202369) UniProt PMID:23202369 NCBI chr19:840,999...848,175
Ensembl chr19:840,999...848,175
JBrowse link
G SHROOM2 shroom family member 2 acts_upstream_of_or_within ISO (PMID:17666436) MGI PMID:17666436 NCBI chr  X:9,786,429...9,949,443
Ensembl chr  X:9,786,429...9,949,443
JBrowse link
cell-cell junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJM1 apical junction component 1 homolog involved_in IEA
IBA
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 9:136,842,478...136,848,801
Ensembl chr 9:136,842,478...136,848,801
JBrowse link
G BHLHA15 basic helix-loop-helix family member a15 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19013146) Ensembl
MGI
PMID:19013146 GO_REF:0000107 NCBI chr 7:98,211,439...98,215,457
Ensembl chr 7:98,211,439...98,215,457
JBrowse link
G CCM2 CCM2 scaffold protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19151727) Ensembl
MGI
PMID:19151727 GO_REF:0000107 NCBI chr 7:44,999,746...45,076,470
Ensembl chr 7:44,999,475...45,076,469
JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25968128)
(PMID:19013146)
Ensembl
MGI
PMID:19013146 PMID:25968128 GO_REF:0000107 NCBI chr 6:47,477,789...47,627,263
Ensembl chr 6:47,477,789...47,627,263
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISO (PMID:23800882) UniProt PMID:23800882 NCBI chr19:42,507,306...42,528,481
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G CLDN1 claudin 1 acts_upstream_of_or_within IMP (PMID:20164257) MGI PMID:20164257 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CLDN6 claudin 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17130295) Ensembl
MGI
PMID:17130295 GO_REF:0000107 NCBI chr16:3,014,712...3,018,183
Ensembl chr16:3,014,712...3,020,071
JBrowse link
G CLDN9 claudin 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17130295) Ensembl
MGI
PMID:17130295 GO_REF:0000107 NCBI chr16:3,012,923...3,014,505
Ensembl chr16:3,012,923...3,014,505
JBrowse link
G CXADR CXADR Ig-like cell adhesion molecule involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:16543498) UniProt
MGI
PMID:16543498 GO_REF:0000024 NCBI chr21:17,513,043...17,636,262
Ensembl chr21:17,513,043...17,593,579
JBrowse link
G FLNA filamin A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:154,348,531...154,374,634
Ensembl chr  X:154,348,524...154,374,634
JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9620080) Ensembl
MGI
PMID:9620080 GO_REF:0000107 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G HEG1 heart development protein with EGF like domains 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19151727) Ensembl
MGI
PMID:19151727 GO_REF:0000107 NCBI chr 3:124,965,710...125,055,997
Ensembl chr 3:124,965,710...125,055,997
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:12749857 RGD:1625017 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,699...44,432,845
JBrowse link
G LIMS1 LIM zinc finger domain containing 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:19652092) GO_Central
MGI
PMID:19652092 GO_REF:0000033 NCBI chr 2:108,533,671...108,687,246
Ensembl chr 2:108,533,671...108,687,246
JBrowse link
G LIMS2 LIM zinc finger domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:19652092) Ensembl
MGI
GO_Central
PMID:19652092 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:127,638,426...127,681,786
Ensembl chr 2:127,638,381...127,681,786
JBrowse link
G MARVELD2 MARVEL domain containing 2 involved_in
acts_upstream_of_or_within
IEA
IMP
(PMID:20164257) Ensembl
MGI
PMID:20164257 GO_REF:0000107 NCBI chr 5:69,415,116...69,444,330
Ensembl chr 5:69,415,065...69,444,330
JBrowse link
G MARVELD3 MARVEL domain containing 3 acts_upstream_of_or_within IMP (PMID:20164257) MGI PMID:20164257 NCBI chr16:71,626,184...71,641,965
Ensembl chr16:71,626,161...71,642,114
JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12695331) Ensembl
MGI
PMID:12695331 GO_REF:0000107 NCBI chr22:29,603,556...29,698,600
Ensembl chr22:29,603,553...29,698,598
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in NAS (PMID:11368788) UniProt PMID:11368788 NCBI chr  X:5,890,042...6,228,867
Ensembl chr  X:5,840,637...6,228,867
JBrowse link
G OCLN occludin acts_upstream_of_or_within IMP (PMID:20164257) MGI PMID:20164257 NCBI chr 5:69,492,547...69,558,104
Ensembl chr 5:69,492,292...69,558,104
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in
acts_upstream_of_positive_effect
IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:51,615,299...52,087,615
Ensembl chr 6:51,615,299...52,087,613
JBrowse link
G PRKCI protein kinase C iota involved_in IMP (PMID:11257119) UniProt PMID:11257119 NCBI chr 3:170,222,424...170,305,977
Ensembl chr 3:170,222,424...170,305,977
JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:20016102) MGI PMID:20016102 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967
JBrowse link
G SMAD3 SMAD family member 3 involved_in IMP (PMID:18505915) BHF-UCL PMID:18505915 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IDA (PMID:18505915) BHF-UCL PMID:18505915 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IDA (PMID:18505915) BHF-UCL PMID:18505915 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G TGFB3 transforming growth factor beta 3 involved_in IDA (PMID:18505915) BHF-UCL PMID:18505915 NCBI chr14:75,958,097...75,983,011
Ensembl chr14:75,958,097...75,983,011
JBrowse link
G TJP1 tight junction protein 1 involved_in IMP
IBA
(PMID:25753039) ARUK-UCL
GO_Central
PMID:25753039 GO_REF:0000033 NCBI chr15:29,699,367...29,969,049
Ensembl chr15:29,699,367...29,968,915
JBrowse link
G TJP2 tight junction protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:69,121,264...69,255,208
Ensembl chr 9:69,121,264...69,274,615
JBrowse link
G TJP3 tight junction protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:3,708,384...3,750,813
Ensembl chr19:3,708,362...3,750,813
JBrowse link
G TMIGD1 transmembrane and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:33129760) Ensembl
MGI
PMID:33129760 GO_REF:0000107 NCBI chr17:30,316,333...30,334,057
Ensembl chr17:30,316,333...30,334,059
JBrowse link
G XIRP2 xin actin binding repeat containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20360251) Ensembl
MGI
PMID:20360251 GO_REF:0000107 NCBI chr 2:166,888,480...167,259,753
Ensembl chr 2:166,888,480...167,259,753
JBrowse link
cell-substrate junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FN1 fibronectin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:12867986) Ensembl
MGI
GO_Central
PMID:12867986 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G ITGA5 integrin subunit alpha 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 NCBI chr12:54,395,261...54,419,266
Ensembl chr12:54,395,261...54,419,266
JBrowse link
G ITGA6 integrin subunit alpha 6 involved_in TAS (PMID:9185503) PINC PMID:9185503 NCBI chr 2:172,427,336...172,506,459
Ensembl chr 2:172,234,216...172,506,459
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,827...47,313,743
JBrowse link
G TLN1 talin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12867986) Ensembl
MGI
PMID:12867986 GO_REF:0000107 NCBI chr 9:35,696,948...35,732,195
Ensembl chr 9:35,696,948...35,732,195
JBrowse link
G TNS1 tensin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9087448) Ensembl
MGI
PMID:9087448 GO_REF:0000107 NCBI chr 2:217,799,791...218,033,982
Ensembl chr 2:217,799,588...218,033,982
JBrowse link
cell-substrate junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB8B RAB8B, member RAS oncogene family involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:63,189,606...63,267,776
Ensembl chr15:63,189,560...63,267,776
JBrowse link
complement-mediated synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1QA complement C1q A chain involved_in IEA
ISS
Ensembl
ARUK-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C3 complement C3 involved_in IEA
ISS
Ensembl
ARUK-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G ITGAM integrin subunit alpha M involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr16:31,259,975...31,332,877
Ensembl chr16:31,259,967...31,332,892
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link
dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:23365224) MGI PMID:23365224 NCBI chr 1:179,099,330...179,229,677
Ensembl chr 1:179,099,330...179,229,684
JBrowse link
G CKAP5 cytoskeleton associated protein 5 acts_upstream_of_or_within ISO (PMID:23936366) MGI PMID:23936366 NCBI chr11:46,743,048...46,846,280
Ensembl chr11:46,743,048...46,846,308
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683) MGI PMID:31141683 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G CTTN cortactin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23365224) Ensembl
MGI
PMID:23365224 GO_REF:0000107 NCBI chr11:70,398,529...70,436,575
Ensembl chr11:70,398,404...70,436,584
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in TAS (PMID:25707991) ARUK-UCL PMID:25707991 NCBI chr 6:111,660,332...111,873,452
Ensembl chr 6:111,660,332...111,873,452
JBrowse link
G IGF1R insulin like growth factor 1 receptor involved_in IEA
ISS
(PMID:19406747) Ensembl
ARUK-UCL
PMID:19406747 GO_REF:0000107 NCBI chr15:98,648,539...98,964,530
Ensembl chr15:98,648,539...98,964,530
JBrowse link
G INSR insulin receptor involved_in ISS (PMID:19406747) ARUK-UCL PMID:19406747 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G ITGA3 integrin subunit alpha 3 acts_upstream_of_or_within
involved_in
ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:50,056,110...50,090,481
Ensembl chr17:50,055,968...50,090,481
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A acts_upstream_of_or_within
involved_in
ISO
IEA
PMID:19890013 MGI
Ensembl
PMID:19890013 GO_REF:0000107 RGD:8553536 NCBI chr15:41,493,874...41,503,551
Ensembl chr15:41,493,393...41,503,551
JBrowse link
G MTMR2 myotubularin related protein 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr11:95,832,880...95,924,107
Ensembl chr11:95,821,766...95,925,315
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr22:38,057,255...38,075,701
Ensembl chr22:38,056,311...38,075,701
JBrowse link
G PRNP prion protein (Kanno blood group) involved_in TAS (PMID:25707991) ARUK-UCL PMID:25707991 NCBI chr20:4,686,456...4,701,588
Ensembl chr20:4,686,350...4,701,590
JBrowse link
G TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21068316) Ensembl
MGI
PMID:21068316 GO_REF:0000107 NCBI chr 2:158,968,640...159,232,659
Ensembl chr 2:158,968,640...159,232,659
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link
dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARC activity regulated cytoskeleton associated protein involved_in TAS (PMID:15537891) ARUK-UCL PMID:15537891 NCBI chr 8:142,611,049...142,614,479
Ensembl chr 8:142,611,049...142,614,479
JBrowse link
G CDC42 cell division cycle 42 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:22,052,709...22,101,360
Ensembl chr 1:22,052,627...22,101,360
JBrowse link
G CTNND2 catenin delta 2 involved_in IMP
IBA
(PMID:25807484) UniProt
GO_Central
PMID:25807484 GO_REF:0000033 NCBI chr 5:10,971,836...11,904,446
Ensembl chr 5:10,971,836...11,904,446
JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISS UniProt GO_REF:0000024 NCBI chr21:46,458,891...46,583,871
Ensembl chr21:46,458,891...46,572,743
JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:7,187,187...7,220,050
Ensembl chr17:7,187,187...7,219,836
JBrowse link
G DOCK10 dedicator of cytokinesis 10 involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:224,765,090...225,042,468
Ensembl chr 2:224,765,090...225,042,468
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,335,278...1,349,418
Ensembl chr 1:1,335,276...1,349,418
JBrowse link
G EPHA5 EPH receptor A5 involved_in ISO PMID:20824214 UniProt PMID:20824214 RGD:8554330 NCBI chr 4:65,319,567...65,670,489
Ensembl chr 4:65,319,563...65,670,495
JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:17310244) UniProt
MGI
Ensembl
PMID:17310244 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:134,795,260...135,260,467
Ensembl chr 3:134,795,260...135,260,467
JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:17310244) UniProt
MGI
Ensembl
PMID:17310244 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:22,710,838...22,921,500
Ensembl chr 1:22,710,839...22,921,500
JBrowse link
G EPHB3 EPH receptor B3 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:184,561,785...184,582,408
Ensembl chr 3:184,561,785...184,582,408
JBrowse link
G HDAC6 histone deacetylase 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24113571) Ensembl
MGI
PMID:24113571 GO_REF:0000107 NCBI chr  X:48,801,398...48,824,982
Ensembl chr  X:48,801,377...48,824,982
JBrowse link
G MYO5B myosin VB ISO RGD PMID:18984164 RGD:11533643 NCBI chr18:49,822,789...50,195,147
Ensembl chr18:49,822,789...50,195,164
JBrowse link
G PAK3 p21 (RAC1) activated kinase 3 involved_in TAS
IEA
ISS
(PMID:19036346) UniProt
Ensembl
PMID:19036346 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:110,944,397...111,227,361
Ensembl chr  X:110,944,285...111,227,361
JBrowse link
G PRMT3 protein arginine methyltransferase 3 ISO RGD PMID:20647003 RGD:9491824 NCBI chr11:20,387,716...20,509,338
Ensembl chr11:20,387,558...20,509,338
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISS (PMID:18082964) BHF-UCL PMID:18082964 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930
JBrowse link
G SEPTIN7 septin 7 acts_upstream_of_or_within ISO (PMID:24113571) MGI PMID:24113571 NCBI chr 7:35,800,986...35,915,763
Ensembl chr 7:35,800,932...35,907,110
JBrowse link
G SHANK1 SH3 and multiple ankyrin repeat domains 1 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:50,659,255...50,719,802
Ensembl chr19:50,659,255...50,719,802
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:21558424) BHF-UCL
MGI
Ensembl
PMID:21558424 GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,408...50,733,212
JBrowse link
G WASL WASP like actin nucleation promoting factor involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:123,681,943...123,749,003
Ensembl chr 7:123,681,943...123,749,003
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA
IDA
(PMID:21670302) Ensembl
ParkinsonsUK-UCL
PMID:21670302 GO_REF:0000107 NCBI chr 3:13,816,258...13,880,071
Ensembl chr 3:13,816,258...13,880,071
JBrowse link
G ZNF365 zinc finger protein 365 involved_in ISO (PMID:25983680) UniProt PMID:25983680 NCBI chr10:62,643,643...62,672,010
Ensembl chr10:62,520,448...62,672,011
JBrowse link
G ZNF365 zinc finger protein 365 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,374,369...62,480,285
Ensembl chr10:62,374,192...62,480,288
JBrowse link
dendritic spine organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF1 ARF GTPase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:228,082,708...228,099,212
Ensembl chr 1:228,082,708...228,099,212
JBrowse link
G CHRFAM7A CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion involved_in ISS
IEA
ParkinsonsUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:30,360,566...30,393,900
Ensembl chr15:30,360,566...30,393,849
JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit involved_in ISS ParkinsonsUK-UCL GO_REF:0000024 NCBI chr15:32,030,483...32,173,018
Ensembl chr15:31,923,438...32,173,018
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683) MGI PMID:31141683 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G DLG4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr17:7,187,187...7,220,050
Ensembl chr17:7,187,187...7,219,836
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr16:9,753,404...10,182,908
Ensembl chr16:9,753,404...10,183,337
JBrowse link
G LGMN legumain involved_in ISS
IEA
(PMID:25326800) ARUK-UCL
Ensembl
PMID:25326800 GO_REF:0000107 NCBI chr14:92,703,809...92,748,627
Ensembl chr14:92,703,807...92,748,679
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr22:38,057,255...38,075,701
Ensembl chr22:38,056,311...38,075,701
JBrowse link
G RPH3A rabphilin 3A involved_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chr12:112,575,236...112,898,881
Ensembl chr12:112,570,380...112,898,881
JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH1 cadherin 1 involved_in IMP (PMID:29999492) UniProt PMID:29999492 NCBI chr16:68,737,292...68,835,537
Ensembl chr16:68,737,292...68,835,537
JBrowse link
G DSG3 desmoglein 3 involved_in IMP (PMID:9701552) UniProt PMID:9701552 NCBI chr18:31,447,741...31,478,702
Ensembl chr18:31,447,741...31,478,702
JBrowse link
G JUP junction plakoglobin involved_in
acts_upstream_of_or_within
IEA
ISO
IDA
IMP
(PMID:18496566), (PMID:8954745), (PMID:9847250)
(PMID:9049256)
(PMID:20859650)
Ensembl
MGI
BHF-UCL
UniProt
PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 GO_REF:0000107 NCBI chr17:41,754,609...41,786,711
Ensembl chr17:41,754,604...41,786,931
JBrowse link
G PKP1 plakophilin 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:201,283,506...201,332,989
Ensembl chr 1:201,283,452...201,332,993
JBrowse link
G PKP2 plakophilin 2 involved_in IMP (PMID:18474624) BHF-UCL PMID:18474624 NCBI chr12:32,790,755...32,896,777
Ensembl chr12:32,790,745...32,896,798
JBrowse link
G PKP3 plakophilin 3 involved_in IMP
ISS
IEA
(PMID:20859650) UniProt
Ensembl
PMID:20859650 GO_REF:0000024 GO_REF:0000107 NCBI chr11:392,596...404,908
Ensembl chr11:392,614...404,908
JBrowse link
G PRKCA protein kinase C alpha involved_in IMP (PMID:18474624) BHF-UCL PMID:18474624 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNAI2 snail family transcriptional repressor 2 involved_in IEA
IMP
(PMID:9182671) Ensembl
BHF-UCL
PMID:9182671 GO_REF:0000107 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740
JBrowse link
desmosome maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSC1 desmocollin 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr18:31,129,236...31,162,856
Ensembl chr18:31,129,236...31,162,856
JBrowse link
G PKP1 plakophilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,283,506...201,332,989
Ensembl chr 1:201,283,452...201,332,993
JBrowse link
desmosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSG2 desmoglein 2 involved_in IMP (PMID:16505173) BHF-UCL PMID:16505173 NCBI chr18:31,498,177...31,549,008
Ensembl chr18:31,497,624...31,551,351
JBrowse link
G DSP desmoplakin involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:16917092)
(PMID:9864371)
BHF-UCL
MGI
Ensembl
PMID:9864371 PMID:16917092 GO_REF:0000107 NCBI chr 6:7,541,671...7,586,714
Ensembl chr 6:7,541,326...7,586,717
JBrowse link
G GRHL1 grainyhead like transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24586629) Ensembl
MGI
PMID:24586629 GO_REF:0000107 NCBI chr 2:9,951,693...10,002,277
Ensembl chr 2:9,951,693...10,002,277
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18703497) Ensembl
MGI
PMID:18703497 GO_REF:0000107 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200
JBrowse link
G PERP p53 apoptosis effector related to PMP22 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21285247) Ensembl
MGI
PMID:21285247 GO_REF:0000107 NCBI chr 6:138,088,505...138,107,419
Ensembl chr 6:138,088,505...138,107,419
JBrowse link
G PKP2 plakophilin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:32,790,755...32,896,777
Ensembl chr12:32,790,745...32,896,798
JBrowse link
G PKP3 plakophilin 3 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:392,596...404,908
Ensembl chr11:392,614...404,908
JBrowse link
establishment of synaptic specificity at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHAT choline O-acetyltransferase acts_upstream_of_or_within ISO (PMID:12533614) MGI PMID:12533614 NCBI chr10:49,609,095...49,667,942
Ensembl chr10:49,609,095...49,667,942
JBrowse link
G F2R coagulation factor II thrombin receptor involved_in ISO
ISS
RGD
UniProt
PMID:12815704 GO_REF:0000024 RGD:1582330 NCBI chr 5:76,716,126...76,735,770
Ensembl chr 5:76,716,126...76,735,770
JBrowse link
G GPHN gephyrin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:10531433) GO_Central
MGI
PMID:10531433 GO_REF:0000033 NCBI chr14:66,508,147...67,735,355
Ensembl chr14:66,507,407...67,181,803
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:7,129,093...7,158,945
Ensembl chr12:7,129,698...7,158,945
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:23074245)
(PMID:31141683)
MGI PMID:23074245 PMID:31141683 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IMP (PMID:27418511) UniProt PMID:27418511 NCBI chr 4:92,303,966...93,810,456
Ensembl chr 4:92,303,966...93,810,157
JBrowse link
G LRRC4 leucine rich repeat containing 4 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:16980967) Ensembl
MGI
GO_Central
PMID:16980967 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:128,027,071...128,032,128
Ensembl chr 7:128,027,071...128,032,107
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS
IEA
(PMID:26440732) ARUK-UCL
Ensembl
PMID:26440732 GO_REF:0000107 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G NPTN neuroplastin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24554721) Ensembl
MGI
PMID:24554721 GO_REF:0000107 NCBI chr15:73,560,014...73,633,389
Ensembl chr15:73,560,014...73,634,134
JBrowse link
G PLXNB2 plexin B2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,274,979...50,307,646
Ensembl chr22:50,274,979...50,307,646
JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IDA (PMID:27373832) UniProt PMID:27373832 NCBI chr 1:206,203,541...206,464,436
Ensembl chr 1:206,203,346...206,464,436
JBrowse link
G SRGAP2C SLIT-ROBO Rho GTPase activating protein 2C involved_in IDA (PMID:27373832), (PMID:34707291) UniProt PMID:27373832 PMID:34707291 NCBI chr 1:121,184,975...121,392,874
Ensembl chr 1:121,184,811...121,392,874
JBrowse link
G WNT5A Wnt family member 5A involved_in TAS (PMID:24449494) ParkinsonsUK-UCL PMID:24449494 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
G WNT7A Wnt family member 7A involved_in TAS (PMID:24449494) ParkinsonsUK-UCL PMID:24449494 NCBI chr 3:13,816,258...13,880,071
Ensembl chr 3:13,816,258...13,880,071
JBrowse link
excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TREM2 triggering receptor expressed on myeloid cells 2 involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link
filtration diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:27711214) Ensembl
MGI
PMID:27711214 GO_REF:0000107 NCBI chr19:46,744,760...46,758,575
Ensembl chr19:46,746,046...46,776,988
JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN1 actinin alpha 1 involved_in IMP (PMID:16807302) UniProt PMID:16807302 NCBI chr14:68,874,128...68,979,302
Ensembl chr14:68,874,123...68,979,440
JBrowse link
G ACTN2 actinin alpha 2 involved_in IMP (PMID:16807302) UniProt PMID:16807302 NCBI chr 1:236,686,499...236,764,631
Ensembl chr 1:236,664,141...236,764,631
JBrowse link
G ACTN3 actinin alpha 3 involved_in IMP (PMID:16807302) UniProt PMID:16807302 NCBI chr11:66,546,395...66,563,334
Ensembl chr11:66,546,395...66,563,334
JBrowse link
G AJUBA ajuba LIM protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15728191) Ensembl
MGI
PMID:15728191 GO_REF:0000107 NCBI chr14:22,971,177...22,982,551
Ensembl chr14:22,971,177...22,982,551
JBrowse link
G ARHGAP6 Rho GTPase activating protein 6 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:10699171) Ensembl
GO_Central
MGI
PMID:10699171 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:11,137,544...11,665,920
Ensembl chr  X:11,117,651...11,665,920
JBrowse link
G ARHGEF7 Rho guanine nucleotide exchange factor 7 involved_in HDA (PMID:21423176) UniProt PMID:21423176 NCBI chr13:111,114,619...111,305,734
Ensembl chr13:111,114,559...111,305,737
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15292044) Ensembl
MGI
PMID:15292044 GO_REF:0000107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BCR BCR activator of RhoGEF and GTPase involved_in IMP (PMID:23940119) UniProt PMID:23940119 NCBI chr22:23,180,509...23,318,037
Ensembl chr22:23,179,704...23,318,037
JBrowse link
G CDH11 cadherin 11 involved_in IMP (PMID:33811546) UniProt PMID:33811546 NCBI chr16:64,943,753...65,123,744
Ensembl chr16:64,943,753...65,126,112
JBrowse link
G CORO2B coronin 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29162887) Ensembl
MGI
PMID:29162887 GO_REF:0000107 NCBI chr15:68,518,373...68,727,806
Ensembl chr15:68,578,993...68,727,806
JBrowse link
G CTTN cortactin involved_in ISS UniProt GO_REF:0000024 NCBI chr11:70,398,529...70,436,575
Ensembl chr11:70,398,404...70,436,584
JBrowse link
G DLC1 DLC1 Rho GTPase activating protein involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:15710412) UniProt
MGI
PMID:15710412 GO_REF:0000024 NCBI chr 8:13,083,361...13,604,620
Ensembl chr 8:13,083,361...13,604,610
JBrowse link
G FERMT2 FERM domain containing kindlin 2 involved_in ISS
IMP
IEA
(PMID:21356350) UniProt
ARUK-UCL
Ensembl
PMID:21356350 GO_REF:0000024 GO_REF:0000107 NCBI chr14:52,857,273...52,951,050
Ensembl chr14:52,857,268...52,952,435
JBrowse link
G ITGA2 integrin subunit alpha 2 involved_in ISO
IEA
RGD
Ensembl
PMID:15591055 GO_REF:0000107 RGD:8693310 NCBI chr 5:52,989,352...53,094,779
Ensembl chr 5:52,989,340...53,094,779
JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:14585963 RGD:1581775 NCBI chr16:2,538,021...2,603,188
Ensembl chr16:2,537,979...2,603,190
JBrowse link
G PEAK1 pseudopodium enriched atypical kinase 1 involved_in IMP (PMID:23105102) UniProt PMID:23105102 NCBI chr15:77,100,654...77,420,914
Ensembl chr15:77,100,656...77,420,144
JBrowse link
G PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha involved_in IMP (PMID:20660631) UniProt PMID:20660631 NCBI chr 1:151,195,419...151,249,531
Ensembl chr 1:151,197,949...151,249,536
JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in ISO
IEA
RGD
Ensembl
PMID:14585963 GO_REF:0000107 RGD:1581775 NCBI chr 8:27,310,506...27,459,391
Ensembl chr 8:27,311,482...27,459,391
JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K involved_in IMP (PMID:15899872) UniProt PMID:15899872 NCBI chr 6:127,968,785...128,520,599
Ensembl chr 6:127,968,785...128,520,616
JBrowse link
G PXN paxillin acts_upstream_of_or_within ISO (PMID:14636584) MGI PMID:14636584 NCBI chr12:120,210,447...120,265,730
Ensembl chr12:120,210,439...120,265,771
JBrowse link
G RCC2 regulator of chromosome condensation 2 involved_in IDA (PMID:19738201) UniProt PMID:19738201 NCBI chr 1:17,406,760...17,439,677
Ensembl chr 1:17,406,760...17,439,677
JBrowse link
G RHOD ras homolog family member D involved_in IMP (PMID:23087206) UniProt PMID:23087206 NCBI chr11:67,056,847...67,072,017
Ensembl chr11:67,056,847...67,072,017
JBrowse link
G RHPN1 rhophilin Rho GTPase binding protein 1 acts_upstream_of_or_within ISO (PMID:25071083) MGI PMID:25071083 NCBI chr 8:143,364,255...143,384,221
Ensembl chr 8:143,368,876...143,384,221
JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:95,311,773...95,561,371
Ensembl chr10:95,311,771...95,561,414
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP (PMID:21411625) UniProt PMID:21411625 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G STON1 stonin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26437238) Ensembl
MGI
PMID:26437238 GO_REF:0000107 NCBI chr 2:48,530,154...48,598,513
Ensembl chr 2:48,529,383...48,598,513
JBrowse link
G STON1-GTF2A1L STON1-GTF2A1L readthrough involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:48,529,925...48,776,519
Ensembl chr 2:48,529,925...48,776,517
JBrowse link
G TAOK2 TAO kinase 2 involved_in IDA (PMID:10660600) UniProt PMID:10660600 NCBI chr16:29,973,868...29,992,261
Ensembl chr16:29,973,868...29,992,261
JBrowse link
G TESK2 testis associated actin remodelling kinase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:45,343,883...45,491,163
Ensembl chr 1:45,343,883...45,491,163
JBrowse link
G THSD1 thrombospondin type 1 domain containing 1 involved_in IDA (PMID:29069646) UniProt PMID:29069646 NCBI chr13:52,377,167...52,406,172
Ensembl chr13:52,377,167...52,416,373
JBrowse link
G THY1 Thy-1 cell surface antigen involved_in ISS UniProt GO_REF:0000024 NCBI chr11:119,415,476...119,424,985
Ensembl chr11:119,415,476...119,424,985
JBrowse link
G TRIP6 thyroid hormone receptor interactor 6 involved_in NAS (PMID:14688263) UniProt PMID:14688263 NCBI chr 7:100,867,387...100,873,454
Ensembl chr 7:100,867,387...100,873,454
JBrowse link
G WHAMM WASP homolog associated with actin, golgi membranes and microtubules involved_in IMP (PMID:23087206) UniProt PMID:23087206 NCBI chr15:82,809,628...82,836,108
Ensembl chr15:82,809,628...82,836,108
JBrowse link
focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355
JBrowse link
G STON1 stonin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26437238) Ensembl
MGI
PMID:26437238 GO_REF:0000107 NCBI chr 2:48,530,154...48,598,513
Ensembl chr 2:48,529,383...48,598,513
JBrowse link
G STON1-GTF2A1L STON1-GTF2A1L readthrough involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:48,529,925...48,776,519
Ensembl chr 2:48,529,925...48,776,517
JBrowse link
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLRB glycine receptor beta involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19723286) Ensembl
MGI
PMID:19723286 GO_REF:0000107 NCBI chr 4:157,076,150...157,172,090
Ensembl chr 4:157,076,125...157,172,090
JBrowse link
G GPHN gephyrin involved_in
acts_upstream_of_or_within
IMP
ISO
IBA
IDA
(PMID:25025157)
(PMID:19723286)
(PMID:26613940)
UniProt
MGI
GO_Central
PMID:19723286 PMID:25025157 PMID:26613940 GO_REF:0000033 NCBI chr14:66,508,147...67,735,355
Ensembl chr14:66,507,407...67,181,803
JBrowse link
G LHFPL4 LHFPL tetraspan subfamily member 4 involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:9,498,361...9,553,822
Ensembl chr 3:9,498,361...9,553,822
JBrowse link
G NRXN1 neurexin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G SHISA7 shisa family member 7 involved_in IEA
IBA
ISS
Ensembl
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:55,428,740...55,443,300
Ensembl chr19:55,428,740...55,443,300
JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA1 catenin alpha 1 involved_in ISO
IEA
RGD
Ensembl
PMID:12577316 GO_REF:0000107 RGD:2289808 NCBI chr 5:138,753,425...138,935,034
Ensembl chr 5:138,610,967...138,935,034
JBrowse link
G GJA1 gap junction protein alpha 1 involved_in TAS (PMID:15709751) UniProt PMID:15709751 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GJA5 gap junction protein alpha 5 involved_in IMP
IDA
(PMID:16790700), (PMID:23348765)
(PMID:22247482)
BHF-UCL PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 1:147,756,199...147,773,351
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G GJB1 gap junction protein beta 1 involved_in TAS Reactome Reactome:R-HSA-190861 NCBI chr  X:71,215,239...71,225,516
Ensembl chr  X:71,212,811...71,225,516
JBrowse link
G GJB2 gap junction protein beta 2 involved_in
acts_upstream_of_or_within
IDA
ISO
IEA
(PMID:12767933)
(PMID:24590285)
ARUK-UCL
MGI
Ensembl
PMID:12767933 PMID:24590285 GO_REF:0000107 NCBI chr13:20,187,470...20,192,938
Ensembl chr13:20,187,463...20,192,938
JBrowse link
G GJB6 gap junction protein beta 6 involved_in IMP
NAS
(PMID:19285977)
(PMID:12767933)
ARUK-UCL PMID:12767933 PMID:19285977 NCBI chr13:20,221,962...20,232,319
Ensembl chr13:20,221,962...20,232,365
JBrowse link
G GJC1 gap junction protein gamma 1 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:44,794,104...44,831,364
Ensembl chr17:44,798,448...44,830,816
JBrowse link
G GJD3 gap junction protein delta 3 involved_in IDA (PMID:12154091) UniProt PMID:12154091 NCBI chr17:40,360,652...40,364,737
Ensembl chr17:40,360,652...40,364,737
JBrowse link
G PKP2 plakophilin 2 ISO RGD PMID:17673670 RGD:6784510 NCBI chr12:32,790,755...32,896,777
Ensembl chr12:32,790,745...32,896,798
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN2 neuroligin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:29107521) BHF-UCL
MGI
Ensembl
PMID:29107521 GO_REF:0000024 GO_REF:0000107 NCBI chr17:7,404,653...7,419,860
Ensembl chr17:7,404,874...7,419,860
JBrowse link
G NRXN1 neurexin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G NRXN2 neurexin 2 involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr11:64,606,174...64,723,197
Ensembl chr11:64,606,174...64,723,197
JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29107521) Ensembl
MGI
PMID:29107521 GO_REF:0000107 NCBI chr 3:165,186,720...165,197,109
Ensembl chr 3:165,186,720...165,197,109
JBrowse link
G ZDHHC12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA
IDA
ISS
(PMID:25025157) Ensembl
UniProt
PMID:25025157 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:128,720,873...128,724,127
Ensembl chr 9:128,720,870...128,724,127
JBrowse link
glycine receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPHN gephyrin acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:9812897) MGI
GO_Central
PMID:9812897 GO_REF:0000033 NCBI chr14:66,508,147...67,735,355
Ensembl chr14:66,507,407...67,181,803
JBrowse link
guanylate kinase-associated protein clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRXN1 neurexin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,408...50,733,212
JBrowse link
hemidesmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL17A1 collagen type XVII alpha 1 chain involved_in IDA (PMID:12482924) UniProt PMID:12482924 NCBI chr10:104,031,286...104,085,880
Ensembl chr10:104,031,286...104,085,880
JBrowse link
G DST dystonin involved_in IDA (PMID:12482924) UniProt PMID:12482924 NCBI chr 6:56,457,996...56,954,830
Ensembl chr 6:56,457,987...56,954,830
JBrowse link
G ITGB4 integrin subunit beta 4 involved_in IMP
IDA
IEA
(PMID:23496044)
(PMID:12482924)
UniProt
InterPro
PMID:12482924 PMID:23496044 GO_REF:0000002 NCBI chr17:75,721,459...75,757,818
Ensembl chr17:75,721,328...75,757,818
JBrowse link
G LAMA3 laminin subunit alpha 3 involved_in ISO
IEA
RGD
Ensembl
PMID:8923212 GO_REF:0000107 RGD:633107 NCBI chr18:23,689,453...23,955,066
Ensembl chr18:23,689,453...23,956,222
JBrowse link
G LAMC1 laminin subunit gamma 1 involved_in IMP (PMID:15159456) HGNC-UCL PMID:15159456 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592
JBrowse link
G PLEC plectin involved_in IDA
IBA
(PMID:12482924) UniProt
GO_Central
PMID:12482924 GO_REF:0000033 NCBI chr 8:143,915,153...143,976,745
Ensembl chr 8:143,915,153...143,976,734
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLN4 cerebellin 4 precursor involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:55,997,357...56,005,519
Ensembl chr20:55,997,357...56,005,519
JBrowse link
G CLSTN2 calsyntenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:139,935,185...140,577,397
Ensembl chr 3:139,935,185...140,577,397
JBrowse link
G CLSTN3 calsyntenin 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:7,129,093...7,158,945
Ensembl chr12:7,129,698...7,158,945
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:31141683)
(PMID:23074245)
MGI PMID:23074245 PMID:31141683 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G FGF13 fibroblast growth factor 13 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr  X:138,614,727...139,205,023
Ensembl chr  X:138,614,727...139,222,777
JBrowse link
G GABRA1 gamma-aminobutyric acid type A receptor subunit alpha1 involved_in IEA
IBA
IDA
(PMID:23909897), (PMID:25489750) Ensembl
GO_Central
UniProt
PMID:23909897 PMID:25489750 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:161,847,191...161,899,971
Ensembl chr 5:161,847,063...161,899,981
JBrowse link
G GABRA2 gamma-aminobutyric acid type A receptor subunit alpha2 involved_in IEA
IBA
ISS
Ensembl
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:46,243,548...46,390,300
Ensembl chr 4:46,243,548...46,475,230
JBrowse link
G GABRA3 gamma-aminobutyric acid type A receptor subunit alpha3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:152,166,234...152,451,315
Ensembl chr  X:152,166,234...152,451,315
JBrowse link
G GABRA4 gamma-aminobutyric acid type A receptor subunit alpha4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:46,918,900...46,993,581
Ensembl chr 4:46,918,900...46,993,581
JBrowse link
G GABRA5 gamma-aminobutyric acid type A receptor subunit alpha5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:26,866,719...26,949,208
Ensembl chr15:26,866,911...26,949,208
JBrowse link
G GABRA6 gamma-aminobutyric acid type A receptor subunit alpha6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:161,685,721...161,702,592
Ensembl chr 5:161,547,063...161,702,593
JBrowse link
G GABRB2 gamma-aminobutyric acid type A receptor subunit beta2 involved_in IEA
IDA
(PMID:23909897), (PMID:25489750) Ensembl
UniProt
PMID:23909897 PMID:25489750 GO_REF:0000107 NCBI chr 5:161,288,436...161,548,404
Ensembl chr 5:161,288,429...161,549,044
JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 involved_in IDA (PMID:25489750) UniProt PMID:25489750 NCBI chr15:26,543,552...26,773,763
Ensembl chr15:26,543,552...26,939,539
JBrowse link
G GABRE gamma-aminobutyric acid type A receptor subunit epsilon involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:151,953,124...151,974,676
Ensembl chr  X:151,953,124...151,974,680
JBrowse link
G GABRG1 gamma-aminobutyric acid type A receptor subunit gamma1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:46,035,769...46,124,054
Ensembl chr 4:46,035,769...46,124,054
JBrowse link
G GABRG2 gamma-aminobutyric acid type A receptor subunit gamma2 involved_in IEA
IBA
IDA
(PMID:23909897), (PMID:25489750) Ensembl
GO_Central
UniProt
PMID:23909897 PMID:25489750 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:162,067,465...162,155,539
Ensembl chr 5:162,000,057...162,162,977
JBrowse link
G GABRG3 gamma-aminobutyric acid type A receptor subunit gamma3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:26,971,181...27,541,984
Ensembl chr15:26,971,181...27,541,984
JBrowse link
G HAPLN4 hyaluronan and proteoglycan link protein 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:19,254,756...19,262,804
Ensembl chr19:19,254,756...19,262,804
JBrowse link
G LGI2 leucine rich repeat LGI family member 2 involved_in IEA
IBA
ISS
Ensembl
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:24,992,081...25,030,946
Ensembl chr 4:24,998,847...25,030,946
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23358245) MGI
Ensembl
PMID:23358245 GO_REF:0000107 NCBI chr 6:37,630,679...37,697,883
Ensembl chr 6:37,630,679...37,699,306
JBrowse link
G NLGN2 neuroligin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,404,653...7,419,860
Ensembl chr17:7,404,874...7,419,860
JBrowse link
G NPAS4 neuronal PAS domain protein 4 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:66,409,158...66,426,707
Ensembl chr11:66,421,035...66,426,707
JBrowse link
G PLXNB1 plexin B1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:48,403,854...48,430,310
Ensembl chr 3:48,403,854...48,430,086
JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IDA (PMID:27373832) UniProt PMID:27373832 NCBI chr 1:206,203,541...206,464,436
Ensembl chr 1:206,203,346...206,464,436
JBrowse link
G SRGAP2C SLIT-ROBO Rho GTPase activating protein 2C involved_in IDA (PMID:27373832), (PMID:34707291) UniProt PMID:27373832 PMID:34707291 NCBI chr 1:121,184,975...121,392,874
Ensembl chr 1:121,184,811...121,392,874
JBrowse link
G WNT5A Wnt family member 5A involved_in TAS (PMID:24449494) ParkinsonsUK-UCL PMID:24449494 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
maintenance of postsynaptic density structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF6 ARF GTPase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,893,082...49,897,054
Ensembl chr14:49,893,079...49,897,054
JBrowse link
G CSMD2 CUB and Sushi multiple domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:33,513,998...34,165,842
Ensembl chr 1:33,513,998...34,165,842
JBrowse link
G DGKZ diacylglycerol kinase zeta involved_in ISO (PMID:19229292) SynGO PMID:19229292 NCBI chr11:46,332,926...46,380,554
Ensembl chr11:46,332,905...46,380,554
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G MPP2 MAGUK p55 scaffold protein 2 involved_in IEA GOC GO_REF:0000108 NCBI chr17:43,875,360...43,909,711
Ensembl chr17:43,875,357...43,909,711
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 involved_in IEA GOC GO_REF:0000108 NCBI chr12:81,257,975...81,759,350
Ensembl chr12:81,257,975...81,759,553
JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355
JBrowse link
G PRICKLE2 prickle planar cell polarity protein 2 involved_in ISO (PMID:34613779) SynGO PMID:34613779 NCBI chr 3:64,092,236...64,268,173
Ensembl chr 3:64,092,236...64,445,476
JBrowse link
G PSD pleckstrin and Sec7 domain containing involved_in ISO PMID:16672654 SynGO PMID:16672654 RGD:8554141 NCBI chr10:102,402,619...102,419,946
Ensembl chr10:102,402,617...102,421,539
JBrowse link
G SHANK1 SH3 and multiple ankyrin repeat domains 1 involved_in IEA GOC GO_REF:0000108 NCBI chr19:50,659,255...50,719,802
Ensembl chr19:50,659,255...50,719,802
JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 involved_in IEA GOC GO_REF:0000108 NCBI chr11:70,467,854...71,253,228
Ensembl chr11:70,467,854...71,252,577
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA GOC GO_REF:0000108 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,408...50,733,212
JBrowse link
maintenance of postsynaptic specialization structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRL3 adhesion G protein-coupled receptor L3 involved_in ISO (PMID:30792275) SynGO PMID:30792275 NCBI chr 4:61,200,326...62,078,335
Ensembl chr 4:61,200,326...62,078,335
JBrowse link
G CADM1 cell adhesion molecule 1 involved_in ISO (PMID:21145003) SynGO PMID:21145003 NCBI chr11:115,169,236...115,504,415
Ensembl chr11:115,169,218...115,504,957
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in ISO PMID:21209184 SynGO PMID:21209184 RGD:13702189 NCBI chr11:123,057,489...123,062,462
Ensembl chr11:123,057,489...123,063,230
JBrowse link
G ITGB1 integrin subunit beta 1 involved_in ISO PMID:20935643 SynGO PMID:20935643 RGD:155230798 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,827...47,313,743
JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:68,042,344...68,433,841
Ensembl chr  X:67,949,349...68,433,913
JBrowse link
G RAPSN receptor associated protein of the synapse involved_in IEA GOC GO_REF:0000108 NCBI chr11:47,437,764...47,449,136
Ensembl chr11:47,437,764...47,449,143
JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,418,167...33,453,689
Ensembl chr 6:33,419,661...33,453,689
JBrowse link
maintenance of presynaptic active zone structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSN bassoon presynaptic cytomatrix protein involved_in IEA GOC GO_REF:0000108 NCBI chr 3:49,554,477...49,673,130
Ensembl chr 3:49,554,477...49,671,549
JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:989,959...1,495,933
Ensembl chr12:990,509...1,495,933
JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:55,508,311...56,468,467
Ensembl chr 3:55,508,311...56,469,095
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein involved_in IEA GOC GO_REF:0000108 NCBI chr 7:82,754,012...83,162,884
Ensembl chr 7:82,754,012...83,162,930
JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11359932) Ensembl
MGI
PMID:11359932 GO_REF:0000107 NCBI chr19:18,196,784...18,204,042
Ensembl chr19:18,196,784...18,204,042
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:71,886,550...72,403,145
Ensembl chr 6:71,886,550...72,403,150
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:103,500,610...104,256,094
Ensembl chr 8:103,500,610...104,254,430
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:40,620,680...40,692,066
Ensembl chr 1:40,620,680...40,665,682
JBrowse link
maintenance of synapse structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRB3 adhesion G protein-coupled receptor B3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25611509) Ensembl
MGI
PMID:25611509 GO_REF:0000107 NCBI chr 6:68,635,282...69,389,506
Ensembl chr 6:68,635,282...69,390,571
JBrowse link
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IDA
IMP
(PMID:21236345) SynGO PMID:21236345 NCBI chr 3:57,227,729...57,273,471
Ensembl chr 3:57,227,726...57,278,105
JBrowse link
G C1QL1 complement C1q like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25611509) Ensembl
MGI
PMID:25611509 GO_REF:0000107 NCBI chr17:44,959,693...44,968,303
Ensembl chr17:44,959,693...44,968,303
JBrowse link
G CBLN1 cerebellin 1 precursor involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr16:49,277,917...49,281,838
Ensembl chr16:49,277,917...49,281,838
JBrowse link
G CBLN2 cerebellin 2 precursor involved_in ISS
IBA
IEA
UniProt
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:72,536,681...72,638,521
Ensembl chr18:72,536,680...72,638,521
JBrowse link
G CBLN3 cerebellin 3 precursor involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:24,426,545...24,429,668
Ensembl chr14:24,426,545...24,430,954
JBrowse link
G CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:23,765,834...23,767,972
Ensembl chr22:23,765,834...23,767,972
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:25951243), (PMID:31141683) MGI PMID:25951243 PMID:31141683 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G DCTN1 dynactin subunit 1 involved_in TAS (PMID:18305234) ARUK-UCL PMID:18305234 NCBI chr 2:74,361,155...74,391,866
Ensembl chr 2:74,361,154...74,392,087
JBrowse link
G GRN granulin precursor involved_in ISO (PMID:29398357) SynGO PMID:29398357 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106
JBrowse link
G L1CAM L1 cell adhesion molecule involved_in ISO (PMID:30846310) SynGO PMID:30846310 NCBI chr  X:153,861,514...153,886,173
Ensembl chr  X:153,861,514...153,886,173
JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:132,123,340...132,648,688
Ensembl chr 7:132,123,340...132,648,688
JBrowse link
G SDF4 stromal cell derived factor 4 involved_in IGI (PMID:33667157) FlyBase PMID:33667157 NCBI chr 1:1,216,931...1,232,001
Ensembl chr 1:1,216,931...1,232,031
JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:24831527) SynGO PMID:24831527 NCBI chr 7:83,955,777...84,492,725
Ensembl chr 7:83,955,777...84,492,724
JBrowse link
G SORT1 sortilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,309,575...109,397,918
Ensembl chr 1:109,309,568...109,397,918
JBrowse link
modification of postsynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3 ABI family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:49,210,707...49,223,225
Ensembl chr17:49,210,411...49,223,225
JBrowse link
G CABP1 calcium binding protein 1 involved_in ISO (PMID:29478916) SynGO PMID:29478916 NCBI chr12:120,640,626...120,680,866
Ensembl chr12:120,640,626...120,667,324
JBrowse link
G CAP1 cyclase associated actin cytoskeleton regulatory protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:40,040,240...40,072,648
Ensembl chr 1:40,040,233...40,072,649
JBrowse link
G CFL1 cofilin 1 involved_in ISO PMID:16025109 SynGO PMID:16025109 RGD:13702428 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026
JBrowse link
G CTNNA2 catenin alpha 2 involved_in ISO (PMID:15034585) SynGO PMID:15034585 NCBI chr 2:79,185,377...80,648,780
Ensembl chr 2:79,185,231...80,648,861
JBrowse link
G CTTN cortactin involved_in ISO PMID:14684878 SynGO PMID:14684878 RGD:13702237 NCBI chr11:70,398,529...70,436,575
Ensembl chr11:70,398,404...70,436,584
JBrowse link
G DIXDC1 DIX domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:111,927,315...112,022,653
Ensembl chr11:111,927,144...112,022,653
JBrowse link
G ITPKA inositol-trisphosphate 3-kinase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:41,493,874...41,503,551
Ensembl chr15:41,493,393...41,503,551
JBrowse link
G PFN1 profilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061
JBrowse link
G PFN2 profilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:149,964,904...149,970,895
Ensembl chr 3:149,964,904...150,050,788
JBrowse link
G SPTB spectrin beta, erythrocytic involved_in IMP
IDA
(PMID:21297961) SynGO PMID:21297961 NCBI chr14:64,746,283...64,879,907
Ensembl chr14:64,746,283...64,879,907
JBrowse link
G WASF1 WASP family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:110,099,819...110,179,670
Ensembl chr 6:110,099,819...110,180,004
JBrowse link
G WASF3 WASP family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:26,539,139...26,688,948
Ensembl chr13:26,557,683...26,688,948
JBrowse link
modification of postsynaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGAP44 Rho GTPase activating protein 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,789,498...12,991,643
Ensembl chr17:12,789,498...12,991,643
JBrowse link
G CTTN cortactin involved_in ISO PMID:14684878 SynGO PMID:14684878 RGD:13702237 NCBI chr11:70,398,529...70,436,575
Ensembl chr11:70,398,404...70,436,584
JBrowse link
G DLGAP3 DLG associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:34,865,436...34,929,650
Ensembl chr 1:34,865,436...34,929,650
JBrowse link
G DLGAP4 DLG associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,306,339...36,528,633
Ensembl chr20:36,306,336...36,528,637
JBrowse link
G DRD1 dopamine receptor D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:175,440,036...175,444,182
Ensembl chr 5:175,440,036...175,444,182
JBrowse link
G FILIP1 filamin A interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,291,859...75,493,800
Ensembl chr 6:75,291,859...75,493,800
JBrowse link
G RAP1B RAP1B, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:68,610,899...68,671,901
Ensembl chr12:68,610,855...68,671,901
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:28,371,694...28,404,049
Ensembl chr17:28,364,356...28,404,049
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,113,339...49,219,295
Ensembl chr20:49,113,339...49,188,367
JBrowse link
modification of synaptic structure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGRMC1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:119,236,285...119,244,466
Ensembl chr  X:119,236,245...119,244,466
JBrowse link
G REST RE1 silencing transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:56,907,900...56,935,844
Ensembl chr 4:56,907,876...56,966,808
JBrowse link
modification of synaptic structure, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MMP9 matrix metallopeptidase 9 involved_in ISO PMID:19047646 SynGO PMID:19047646 RGD:405650393 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
multiple spine synapse organization, single dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CX3CR1 C-X3-C motif chemokine receptor 1 involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:39,263,494...39,292,966
Ensembl chr 3:39,263,495...39,281,735
JBrowse link
negative regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP6 bone morphogenetic protein 6 involved_in IDA (PMID:26598555) ARUK-UCL PMID:26598555 NCBI chr 6:7,726,099...7,881,728
Ensembl chr 6:7,726,099...7,881,728
JBrowse link
G RDX radixin involved_in IMP (PMID:22467863) UniProt PMID:22467863 NCBI chr11:110,174,922...110,296,614
Ensembl chr11:109,864,295...110,296,712
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IDA (PMID:26598555) ARUK-UCL PMID:26598555 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IMP (PMID:25816133) UniProt PMID:25816133 NCBI chr 8:42,271,302...42,332,460
Ensembl chr 8:42,271,302...42,332,460
JBrowse link
G MIR105-1 microRNA 105-1 acts_upstream_of IDA (PMID:24735924) ARUK-UCL PMID:24735924 NCBI chr  X:152,392,219...152,392,299
Ensembl chr  X:152,392,219...152,392,299
JBrowse link
G MIR105-2 microRNA 105-2 acts_upstream_of IDA (PMID:24735924) ARUK-UCL PMID:24735924 NCBI chr  X:152,394,412...152,394,492
Ensembl chr  X:152,394,412...152,394,492
JBrowse link
G MIR142 microRNA 142 involved_in IDA (PMID:27277258) ARUK-UCL PMID:27277258 NCBI chr17:58,331,232...58,331,318
Ensembl chr17:58,331,232...58,331,318
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IGI (PMID:25816133) UniProt PMID:25816133 NCBI chr18:20,946,906...21,111,813
Ensembl chr18:20,944,612...21,111,813
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IGI (PMID:25816133) UniProt PMID:25816133 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330
JBrowse link
G RPS6 ribosomal protein S6 ISO RGD PMID:25217631 RGD:11041641 NCBI chr 9:19,375,715...19,380,236
Ensembl chr 9:19,375,715...19,380,236
JBrowse link
G TNF tumor necrosis factor involved_in IDA (PMID:25816133) UniProt PMID:25816133 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
negative regulation of dendritic spine maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within IDA (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CFL1 cofilin 1 ISO RGD PMID:23974706 RGD:11570553 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:111,660,332...111,873,452
Ensembl chr 6:111,660,332...111,873,452
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr12:13,537,337...13,982,134
Ensembl chr12:13,437,942...13,982,002
JBrowse link
G MIR30B microRNA 30b involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 8:134,800,520...134,800,607
Ensembl chr 8:134,800,520...134,800,607
JBrowse link
G PRNP prion protein (Kanno blood group) involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:4,686,456...4,701,588
Ensembl chr20:4,686,350...4,701,590
JBrowse link
negative regulation of dendritic spine morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM3 dynamin 3 involved_in ISO
IEA
RGD
Ensembl
PMID:17880892 GO_REF:0000107 RGD:8553820 NCBI chr 1:171,841,498...172,418,466
Ensembl chr 1:171,817,887...172,418,466
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 involved_in ISO
IEA
RGD
Ensembl
PMID:20531346 GO_REF:0000107 RGD:11251757 NCBI chr 6:15,522,807...15,663,058
Ensembl chr 6:15,522,807...15,663,058
JBrowse link
G EFNA1 ephrin A1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:155,127,876...155,134,899
Ensembl chr 1:155,127,876...155,134,899
JBrowse link
G NGEF neuronal guanine nucleotide exchange factor involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:232,878,701...233,013,256
Ensembl chr 2:232,878,701...233,013,256
JBrowse link
G NLGN1 neuroligin 1 involved_in IGI
IEA
(PMID:23143522) BHF-UCL
Ensembl
PMID:23143522 GO_REF:0000107 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (PMID:21808020) CACAO PMID:21808020 NCBI chr  X:71,144,841...71,175,307
Ensembl chr  X:71,144,821...71,175,255
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (PMID:16675393) CACAO PMID:16675393 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930
JBrowse link
G TWF1 twinfilin actin binding protein 1 ISO RGD PMID:33963280 RGD:596938166 NCBI chr12:43,793,723...43,806,317
Ensembl chr12:43,793,723...43,806,328
JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in ISO
IEA
RGD
Ensembl
PMID:25867122 GO_REF:0000107 RGD:11079590 NCBI chr15:25,333,728...25,439,056
Ensembl chr15:25,333,728...25,439,051
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLSTN3 calsyntenin 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:7,129,093...7,158,945
Ensembl chr12:7,129,698...7,158,945
JBrowse link
G PTPN13 protein tyrosine phosphatase non-receptor type 13 involved_in ISO
IBA
IEA
RGD
GO_Central
Ensembl
PMID:23769722 GO_REF:0000033 GO_REF:0000107 RGD:152975632 NCBI chr 4:86,594,315...86,815,161
Ensembl chr 4:86,594,315...86,815,171
JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IMP (PMID:12453878) HGNC-UCL PMID:12453878 NCBI chr12:51,906,944...51,923,361
Ensembl chr12:51,906,908...51,923,361
JBrowse link
G APOD apolipoprotein D involved_in IMP (PMID:21705670) UniProt PMID:21705670 NCBI chr 3:195,568,705...195,583,940
Ensembl chr 3:195,568,705...195,584,033
JBrowse link
G ARHGAP6 Rho GTPase activating protein 6 involved_in IMP (PMID:10699171) BHF-UCL PMID:10699171 NCBI chr  X:11,137,544...11,665,920
Ensembl chr  X:11,117,651...11,665,920
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 3:33,496,245...33,718,254
Ensembl chr 3:33,496,245...33,718,356
JBrowse link
G CORO1C coronin 1C involved_in IMP (PMID:19913511) UniProt PMID:19913511 NCBI chr12:108,645,109...108,731,518
Ensembl chr12:108,645,109...108,731,526
JBrowse link
G DLC1 DLC1 Rho GTPase activating protein involved_in IDA (PMID:19158340) UniProt PMID:19158340 NCBI chr 8:13,083,361...13,604,620
Ensembl chr 8:13,083,361...13,604,610
JBrowse link
G DMTN dematin actin binding protein involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:22,048,931...22,082,525
Ensembl chr 8:22,048,995...22,082,527
JBrowse link
G DUSP22 dual specificity phosphatase 22 involved_in IDA (PMID:20018849) ARUK-UCL PMID:20018849 NCBI chr 6:292,487...351,355
Ensembl chr 6:291,630...351,355
JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in IMP (PMID:20543869) UniProt PMID:20543869 NCBI chr 3:58,564,117...58,627,610
Ensembl chr 3:58,564,117...58,627,610
JBrowse link
G ITGB1BP1 integrin subunit beta 1 binding protein 1 involved_in IEA
IBA
IDA
(PMID:12473654) Ensembl
GO_Central
UniProt
PMID:12473654 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:9,403,475...9,423,569
Ensembl chr 2:9,403,475...9,423,528
JBrowse link
G LOC124907782 dual specificity protein phosphatase 22 involved_in IDA (PMID:20018849) ARUK-UCL PMID:20018849
G LRP1 LDL receptor related protein 1 ISO RGD PMID:20197276 RGD:13800550 NCBI chr12:57,128,483...57,213,361
Ensembl chr12:57,128,483...57,213,361
JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in ISO
IEA
RGD
Ensembl
PMID:15044209 GO_REF:0000107 RGD:1582604 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 3:111,732,496...111,976,517
Ensembl chr 3:111,732,497...111,976,517
JBrowse link
G PTEN phosphatase and tensin homolog involved_in IMP (PMID:9616126) UniProt PMID:9616126 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,862,638...87,971,930
JBrowse link
G RCC2 regulator of chromosome condensation 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:17,406,760...17,439,677
Ensembl chr 1:17,406,760...17,439,677
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:37,344,699...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G THBS1 thrombospondin 1 involved_in TAS (PMID:9304800) BHF-UCL PMID:9304800 NCBI chr15:39,581,079...39,599,466
Ensembl chr15:39,581,079...39,599,466
JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G IL1B interleukin 1 beta involved_in IDA (PMID:11090614) ARUK-UCL PMID:11090614 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816
JBrowse link
G MIR23A microRNA 23a ISO RGD PMID:25798059 RGD:13592600 NCBI chr19:13,836,587...13,836,659
Ensembl chr19:13,836,587...13,836,659
JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBLN1 cerebellin 1 precursor involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr16:49,277,917...49,281,838
Ensembl chr16:49,277,917...49,281,838
JBrowse link
negative regulation of neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTN pleiotrophin ISO RGD PMID:7722643 RGD:9834945 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
negative regulation of postsynaptic density organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFL1 cofilin 1 ISO RGD PMID:26169356 RGD:11074527 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026
JBrowse link
G LILRB2 leukocyte immunoglobulin like receptor B2 involved_in IC ARUK-UCL GO_REF:0000111 NCBI chr19:54,273,812...54,281,110
Ensembl chr19:54,273,812...54,281,184
JBrowse link
negative regulation of postsynaptic membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in IDA (PMID:24259049) Alzheimers_University_of_Toronto PMID:24259049 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:30902970) MGI
Ensembl
PMID:30902970 GO_REF:0000107 NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,535...26,171,128
JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:52,314,281...52,317,657
Ensembl chr10:52,314,281...52,318,042
JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD9 frizzled class receptor 9 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:73,433,778...73,436,120
Ensembl chr 7:73,433,778...73,436,120
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHA7 EPH receptor A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:93,240,020...93,419,559
Ensembl chr 6:93,240,020...93,419,687
JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 ISO RGD PMID:23358245 RGD:9743980 NCBI chr 6:37,630,679...37,697,883
Ensembl chr 6:37,630,679...37,699,306
JBrowse link
G NEGR1 neuronal growth regulator 1 ISO RGD PMID:19711485 RGD:596948412 NCBI chr 1:71,395,943...72,282,539
Ensembl chr 1:71,395,943...72,282,539
JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:15378065) MGI PMID:15378065 NCBI chr 8:140,657,900...141,002,079
Ensembl chr 8:140,657,900...141,002,216
JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:27893610 RGD:243048440 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO RGD PMID:27893610 RGD:243048440 NCBI chr 3:78,597,239...79,767,998
Ensembl chr 3:78,597,239...79,767,998
JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:75,906,675...77,649,964
Ensembl chr 3:75,906,695...77,649,964
JBrowse link
G SLIT1 slit guidance ligand 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:96,998,038...97,185,959
Ensembl chr10:96,998,038...97,185,959
JBrowse link
G TLR2 toll like receptor 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 4:153,684,280...153,710,637
Ensembl chr 4:153,684,050...153,706,260
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
negative regulation of synapse maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:8,310,241...8,322,511
Ensembl chr17:8,310,241...8,322,514
JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:39,603,768...39,607,920
Ensembl chr17:39,603,536...39,609,777
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23407945) Ensembl
MGI
PMID:23407945 GO_REF:0000107 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
negative regulation of synapse organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGRMC1 progesterone receptor membrane component 1 involved_in ISO PMID:25390368 ARUK-UCL PMID:25390368 RGD:12910997 NCBI chr  X:119,236,285...119,244,466
Ensembl chr  X:119,236,245...119,244,466
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSK3B glycogen synthase kinase 3 beta involved_in ISO PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr 3:119,821,321...120,094,447
Ensembl chr 3:119,821,321...120,094,994
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:27,932,879...28,177,130
Ensembl chr18:27,932,879...28,177,946
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (PMID:20534458) BHF-UCL PMID:20534458 NCBI chr 7:78,017,055...79,453,667
Ensembl chr 7:78,017,055...79,453,667
JBrowse link
G NRXN1 neurexin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G NRXN2 neurexin 2 involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr11:64,606,174...64,723,197
Ensembl chr11:64,606,174...64,723,197
JBrowse link
neuromuscular junction development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG3L2 AFG3 like matrix AAA peptidase subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:2917690) Ensembl
MGI
PMID:2917690 GO_REF:0000107 NCBI chr18:12,328,944...12,377,227
Ensembl chr18:12,328,944...12,377,227
JBrowse link
G AGRN agrin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:12165471) GO_Central
MGI
PMID:12165471 GO_REF:0000033 NCBI chr 1:1,020,120...1,056,116
Ensembl chr 1:1,020,120...1,056,119
JBrowse link
G ALS2 alsin Rho guanine nucleotide exchange factor ALS2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16321985) Ensembl
MGI
PMID:16321985 GO_REF:0000107 NCBI chr 2:201,700,267...201,780,933
Ensembl chr 2:201,700,267...201,782,112
JBrowse link
G ANK3 ankyrin 3 involved_in ISO
ISS
RGD
BHF-UCL
PMID:12657669 GO_REF:0000024 RGD:6767302 NCBI chr10:60,026,298...60,733,528
Ensembl chr10:60,026,298...60,733,490
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:6692971), (PMID:6692972), (PMID:7286424) Ensembl
MGI
PMID:6692971 PMID:6692972 PMID:7286424 GO_REF:0000107 NCBI chr 1:201,039,512...201,112,426
Ensembl chr 1:201,039,512...201,112,451
JBrowse link
G CACNA2D2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17320843) Ensembl
MGI
PMID:17320843 GO_REF:0000107 NCBI chr 3:50,362,613...50,504,244
Ensembl chr 3:50,362,613...50,504,244
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in TAS (PMID:8494331) PINC PMID:8494331 NCBI chr10:18,140,424...18,543,557
Ensembl chr10:18,140,424...18,543,557
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17320843) Ensembl
MGI
PMID:17320843 GO_REF:0000107 NCBI chr 2:151,832,771...152,099,167
Ensembl chr 2:151,832,771...152,099,167
JBrowse link
G CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17320843) Ensembl
MGI
PMID:17320843 GO_REF:0000107 NCBI chr22:36,560,857...36,703,752
Ensembl chr22:36,560,857...36,703,752
JBrowse link
G CHRNA1 cholinergic receptor nicotinic alpha 1 subunit acts_upstream_of_or_within IMP (PMID:9221765) MGI PMID:9221765 NCBI chr 2:174,747,592...174,764,472
Ensembl chr 2:174,747,592...174,787,935
JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17418794) Ensembl
MGI
PMID:17418794 GO_REF:0000107 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202
JBrowse link
G COL4A5 collagen type IV alpha 5 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17418794) Ensembl
MGI
PMID:17418794 GO_REF:0000107 NCBI chr  X:108,439,838...108,697,545
Ensembl chr  X:108,439,838...108,697,545
JBrowse link
G DCTN1 dynactin subunit 1 involved_in IMP (PMID:18305234) ARUK-UCL PMID:18305234 NCBI chr 2:74,361,155...74,391,866
Ensembl chr 2:74,361,154...74,392,087
JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in IEA
IDA
(PMID:19038220) Ensembl
UniProt
PMID:19038220 GO_REF:0000107 NCBI chr16:4,425,868...4,456,775
Ensembl chr16:4,425,805...4,456,775
JBrowse link
G DOK7 docking protein 7 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:16794080) MGI
GO_Central
PMID:16794080 GO_REF:0000033 NCBI chr 4:3,463,306...3,501,482
Ensembl chr 4:3,463,306...3,501,473
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:12165471) Ensembl
MGI
BHF-UCL
PMID:12165471 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:1,335,278...1,349,418
Ensembl chr 1:1,335,276...1,349,418
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10655525) Ensembl
MGI
PMID:10655525 GO_REF:0000107 NCBI chr17:39,688,094...39,728,658
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:17418794) MGI PMID:17418794 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FNTA farnesyltransferase, CAAX box, subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,056,323...43,085,785
Ensembl chr 8:43,034,194...43,085,788
JBrowse link
G KALRN kalirin RhoGEF kinase acts_upstream_of_or_within ISO (PMID:23116210) MGI PMID:23116210 NCBI chr 3:124,033,369...124,726,325
Ensembl chr 3:124,033,369...124,726,325
JBrowse link
G KY kyphoscoliosis peptidase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:11136708) GO_Central
MGI
PMID:11136708 GO_REF:0000033 NCBI chr 3:134,599,923...134,651,022
Ensembl chr 3:134,599,923...134,651,636
JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17418794), (PMID:7885444) Ensembl
MGI
PMID:7885444 PMID:17418794 GO_REF:0000107 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23222475)
(PMID:19346129), (PMID:23222475)
Ensembl
MGI
PMID:19346129 PMID:23222475 GO_REF:0000107 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IMP (PMID:21159966) BHF-UCL PMID:21159966 NCBI chr12:40,224,997...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G MUSK muscle associated receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
ISS
IDA
(PMID:16794080)
(PMID:12165471)
(PMID:25537362)
RGD
MGI
UniProt
PMID:7546737 PMID:12165471 PMID:16794080 PMID:25537362 GO_REF:0000024 RGD:633425 NCBI chr 9:110,668,791...110,806,558
Ensembl chr 9:110,668,779...110,806,558
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:19345204) GO_Central
MGI
PMID:19345204 GO_REF:0000033 NCBI chr15:55,826,917...55,993,612
Ensembl chr15:55,826,922...55,993,660
JBrowse link
G NEDD4L NEDD4 like E3 ubiquitin protein ligase involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:58,044,226...58,401,540
Ensembl chr18:58,044,226...58,401,540
JBrowse link
G P2RX2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17706883) Ensembl
MGI
PMID:17706883 GO_REF:0000107 NCBI chr12:132,618,776...132,622,388
Ensembl chr12:132,618,776...132,622,388
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO (PMID:12165471) MGI PMID:12165471 NCBI chr11:77,322,017...77,530,009
Ensembl chr11:77,322,017...77,474,635
JBrowse link
G PDZRN3 PDZ domain containing ring finger 3 involved_in IEA
IBA
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 NCBI chr 3:73,382,431...73,624,941
Ensembl chr 3:73,382,431...73,624,941
JBrowse link
G PPFIBP1 PPFIA binding protein 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:27,524,206...27,695,564
Ensembl chr12:27,523,431...27,695,564
JBrowse link
G PPFIBP2 PPFIA binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:7,513,999...7,667,304
Ensembl chr11:7,513,298...7,657,127
JBrowse link
G RAPSN receptor associated protein of the synapse involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:47,437,764...47,449,136
Ensembl chr11:47,437,764...47,449,143
JBrowse link
G RER1 retention in endoplasmic reticulum sorting receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21187406) Ensembl
MGI
PMID:21187406 GO_REF:0000107 NCBI chr 1:2,391,841...2,405,436
Ensembl chr 1:2,391,775...2,405,442
JBrowse link
G SNTA1 syntrophin alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10995443) Ensembl
MGI
PMID:10995443 GO_REF:0000107 NCBI chr20:33,407,957...33,443,763
Ensembl chr20:33,407,957...33,443,763
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28237315) Ensembl
MGI
PMID:28237315 GO_REF:0000107 NCBI chr15:44,562,696...44,663,662
Ensembl chr15:44,554,818...44,663,688
JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20962009) Ensembl
MGI
PMID:20962009 GO_REF:0000107 NCBI chr19:40,467,001...40,576,464
Ensembl chr19:40,466,241...40,576,464
JBrowse link
G TNC tenascin C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9593587) Ensembl
MGI
ComplexPortal
PMID:9593587 GO_REF:0000107 GO_REF:0000114 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207
JBrowse link
G UNC13A unc-13 homolog A acts_upstream_of_or_within ISO (PMID:15988013) MGI PMID:15988013 NCBI chr19:17,601,336...17,688,354
Ensembl chr19:17,601,336...17,688,365
JBrowse link
G UNC13B unc-13 homolog B acts_upstream_of_or_within ISO (PMID:15988013) MGI PMID:15988013 NCBI chr 9:35,162,009...35,405,335
Ensembl chr 9:35,161,992...35,405,338
JBrowse link
G UTRN utrophin ISO RGD PMID:9604203 RGD:634446 NCBI chr 6:144,285,335...144,853,034
Ensembl chr 6:144,285,335...144,853,034
JBrowse link
G ZC4H2 zinc finger C4H2-type containing involved_in ISS UniProt GO_REF:0000024 NCBI chr  X:64,915,807...65,034,741
Ensembl chr  X:64,915,802...65,034,713
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,682,531...42,699,993
Ensembl chr17:42,682,531...42,699,993
JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:28370195) MGI PMID:28370195 NCBI chr 7:146,116,801...148,420,998
Ensembl chr 7:146,116,002...148,420,998
JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:25014022) MGI PMID:25014022 NCBI chr17:15,229,779...15,265,326
Ensembl chr17:15,229,773...15,272,292
JBrowse link
neurotransmitter-gated ion channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRTM4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO (PMID:23911104) MGI PMID:23911104 NCBI chr 2:76,747,685...77,522,376
Ensembl chr 2:76,747,685...77,593,319
JBrowse link
G NLGN2 neuroligin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29107521) Ensembl
MGI
PMID:29107521 GO_REF:0000107 NCBI chr17:7,404,653...7,419,860
Ensembl chr17:7,404,874...7,419,860
JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29107521) Ensembl
MGI
PMID:29107521 GO_REF:0000107 NCBI chr 3:165,186,720...165,197,109
Ensembl chr 3:165,186,720...165,197,109
JBrowse link
NMDA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E acts_upstream_of_or_within_positive_effect IDA (PMID:24328732) Alzheimers_University_of_Toronto PMID:24328732 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A ISO RGD PMID:18442977 RGD:7241017 NCBI chr 5:63,957,874...63,962,445
Ensembl chr 5:63,957,874...63,962,507
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372
JBrowse link
G NRXN1 neurexin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575
JBrowse link
G RELN reelin involved_in IEA
ISS
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:103,471,789...103,989,658
Ensembl chr 7:103,471,381...103,989,658
JBrowse link
G SHANK3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:50,672,823...50,733,212
Ensembl chr22:50,674,408...50,733,212
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK2 ankyrin 2 involved_in ISO
IEA
RGD
Ensembl
PMID:16687515 GO_REF:0000107 RGD:1599119 NCBI chr 4:112,705,622...113,383,736
Ensembl chr 4:112,818,032...113,384,221
JBrowse link
G CD9 CD9 molecule involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:6,199,946...6,238,266
Ensembl chr12:6,199,715...6,238,271
JBrowse link
G CNTNAP1 contactin associated protein 1 involved_in IMP
IEA
ISS
(PMID:27818385) UniProt
Ensembl
BHF-UCL
PMID:27818385 GO_REF:0000024 GO_REF:0000107 NCBI chr17:42,682,531...42,699,993
Ensembl chr17:42,682,531...42,699,993
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr18:5,392,386...5,630,663
Ensembl chr18:5,392,381...5,630,700
JBrowse link
G GNPAT glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19270340) Ensembl
MGI
PMID:19270340 GO_REF:0000107 NCBI chr 1:231,241,212...231,277,973
Ensembl chr 1:231,241,207...231,277,973
JBrowse link
G NFASC neurofascin acts_upstream_of_or_within
involved_in
ISO (PMID:16337912)
(PMID:19185024)
(PMID:20371806)
MGI
UniProt
PMID:16337912 PMID:19185024 PMID:20371806 NCBI chr 1:204,828,652...205,022,822
Ensembl chr 1:204,828,651...205,022,822
JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:16436605) MGI PMID:16436605 NCBI chr17:15,229,779...15,265,326
Ensembl chr17:15,229,773...15,272,292
JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:114,598,402...114,678,225
Ensembl chr 4:114,598,770...114,678,588
JBrowse link
paranodal junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNTNAP1 contactin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:42,682,531...42,699,993
Ensembl chr17:42,682,531...42,699,993
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO (PMID:21632923) MGI PMID:21632923 NCBI chr18:5,392,386...5,630,663
Ensembl chr18:5,392,381...5,630,700
JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:114,402,080...114,505,473
Ensembl chr 9:114,402,078...114,505,473
JBrowse link
positive regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADD1 adducin 1 involved_in IDA
IBA
IEA
(PMID:25978380) CAFA
GO_Central
Ensembl
PMID:25978380 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:2,843,844...2,930,062
Ensembl chr 4:2,843,844...2,930,076
JBrowse link
G PTPN23 protein tyrosine phosphatase non-receptor type 23 involved_in IMP (PMID:21724833) UniProt PMID:21724833 NCBI chr 3:47,381,021...47,413,435
Ensembl chr 3:47,381,011...47,413,435
JBrowse link
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLG4 discs large MAGUK scaffold protein 4 involved_in ISO PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr17:7,187,187...7,220,050
Ensembl chr17:7,187,187...7,219,836
JBrowse link
G GRIP2 glutamate receptor interacting protein 2 involved_in ISO PMID:20083202 UniProt PMID:20083202 RGD:4107359 NCBI chr 3:14,489,107...14,603,017
Ensembl chr 3:14,489,107...14,556,075
JBrowse link
G SNX27 sorting nexin 27 ISO RGD PMID:25071192 RGD:13508620 NCBI chr 1:151,612,050...151,699,080
Ensembl chr 1:151,612,006...151,699,091
JBrowse link
G SSH1 slingshot protein phosphatase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:20442266 GO_REF:0000107 RGD:11535133 NCBI chr12:108,778,191...108,857,583
Ensembl chr12:108,778,191...108,857,590
JBrowse link
G ZDHHC2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:17,156,482...17,224,799
Ensembl chr 8:17,156,482...17,224,799
JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVRL1 activin A receptor like type 1 involved_in IGI (PMID:32561494) BHF-UCL PMID:32561494 NCBI chr12:51,906,944...51,923,361
Ensembl chr12:51,906,908...51,923,361
JBrowse link
G CLDN1 claudin 1 involved_in ISO
IEA
RGD
Ensembl
PMID:22684624 GO_REF:0000107 RGD:11341733 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CLDN5 claudin 5 involved_in IMP (PMID:25323998) ARUK-UCL PMID:25323998 NCBI chr22:19,523,024...19,525,337
Ensembl chr22:19,523,024...19,527,545
JBrowse link
G DSG3 desmoglein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr18:31,447,741...31,478,702
Ensembl chr18:31,447,741...31,478,702
JBrowse link
G EPHA2 EPH receptor A2 involved_in IMP (PMID:27815408) ARUK-UCL PMID:27815408 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G GCG glucagon involved_in ISO (PMID:25050009) AgBase PMID:25050009 NCBI chr 2:162,142,882...162,152,247
Ensembl chr 2:162,142,882...162,152,404
JBrowse link
G GDF2 growth differentiation factor 2 involved_in IDA (PMID:32561494) BHF-UCL PMID:32561494 NCBI chr10:47,322,454...47,327,588
Ensembl chr10:47,322,454...47,327,588
JBrowse link
G IL17A interleukin 17A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,186,375...52,190,638
Ensembl chr 6:52,186,375...52,190,638
JBrowse link
G NPHP1 nephrocystin 1 involved_in IMP (PMID:19755384) UniProt PMID:19755384 NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066
JBrowse link
G NPHP4 nephrocystin 4 involved_in IMP (PMID:19755384) UniProt PMID:19755384 NCBI chr 1:5,862,811...5,992,425
Ensembl chr 1:5,862,811...5,992,473
JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IMP (PMID:22796473) UniProt PMID:22796473 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967
JBrowse link
positive regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB3</