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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:cell junction assembly
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Accession:GO:0034329 term browser browse the term
Definition:A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction.
Synonyms:xref: Reactome:R-HSA-446728 "Cell junction organization"



show annotations for term's descendants           Sort by:
cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISO (PMID:21959375) RGD PMID:21959375 NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:17,582,006...17,711,774
JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 2:195,008,035...195,053,100
Ensembl chr 2:195,008,039...195,053,100
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:154,839,631...154,876,627
JBrowse link
G Cldn19 claudin 19 involved_in ISO
IEA
(PMID:27593915)
GO_REF:0000107
RGD
Ensembl
PMID:27593915 GO_REF:0000107 NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:138,148,501...138,155,666
JBrowse link
G Cldn3 claudin 3 involved_in ISO
IEA
(PMID:27593915)
GO_REF:0000107
RGD
Ensembl
PMID:27593915 GO_REF:0000107 NCBI chr12:27,345,075...27,346,547
Ensembl chr12:27,345,076...27,348,841
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO
IEA
(PMID:25152456)
GO_REF:0000107
RGD
Ensembl
PMID:25152456 GO_REF:0000107 NCBI chr 7:70,280,360...70,415,277
Ensembl chr 7:70,285,310...70,415,274
JBrowse link
G Myo9a myosin IXA involved_in ISO
IEA
ISS
(PMID:22891260)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:69,044,853...69,248,094
Ensembl chr 8:69,044,885...69,245,231
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22891260)
UniProt
Ensembl
RGD
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:67,639,956...68,018,217
Ensembl chr  X:67,643,252...68,016,831
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22891260)
UniProt
Ensembl
RGD
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:112,338,087...112,350,659
Ensembl chr 7:112,338,107...112,350,659
JBrowse link
G Tln1 talin 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 5:62,583,730...62,613,687
Ensembl chr 5:62,583,731...62,613,687
JBrowse link
G Tln2 talin 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:76,712,112...77,133,361
Ensembl chr 8:76,712,112...77,133,361
JBrowse link
G Vmp1 vacuole membrane protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17724469)
UniProt
Ensembl
RGD
PMID:17724469 GO_REF:0000024 GO_REF:0000107 NCBI chr10:71,903,223...72,002,337
Ensembl chr10:71,903,227...72,002,319
JBrowse link
adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
(PMID:22855531)
GO_REF:0000107
RGD
Ensembl
PMID:22855531 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:16,776,661...16,780,242
JBrowse link
G Clmp CXADR-like membrane protein acts_upstream_of_or_within ISO (PMID:26956488) RGD PMID:26956488 NCBI chr 8:49,957,639...50,065,959
Ensembl chr 8:49,957,720...50,065,959
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS
(PMID:20086044), (PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20086044 PMID:20123964 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662
JBrowse link
G Dsg3 desmoglein 3 involved_in ISO
IEA
(PMID:31835537)
GO_REF:0000107
RGD
Ensembl
PMID:31835537 GO_REF:0000107 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:12,074,321...12,111,766
JBrowse link
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:110,967,317...111,274,315
Ensembl chr 9:110,967,390...111,274,315
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23565059)
Ensembl
RGD
PMID:23565059 GO_REF:0000107 NCBI chr 2:193,937,261...193,988,247
Ensembl chr 2:193,937,261...193,975,164
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO
IEA
(PMID:19060272)
GO_REF:0000107
RGD
Ensembl
PMID:19060272 GO_REF:0000107 NCBI chr 8:33,767,606...33,828,451
Ensembl chr 8:33,767,607...33,828,623
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO
IEA
(PMID:25753039)
GO_REF:0000107
RGD
Ensembl
PMID:25753039 GO_REF:0000107 NCBI chr11:82,212,896...82,273,803
Ensembl chr11:82,212,951...82,273,803
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,688,703...86,691,231
JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA
(PMID:18593713)
GO_REF:0000107
RGD
Ensembl
PMID:18593713 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:71,263,508...71,291,849
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,215,626...107,372,398
Ensembl chr10:107,215,633...107,372,402
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:20086044)
Ensembl
RGD
PMID:20086044 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,315,069...3,405,163
JBrowse link
G Zfp703 zinc finger protein 703 involved_in IEA
ISO
GO_REF:0000107
(PMID:21317240)
Ensembl
RGD
PMID:21317240 GO_REF:0000107 NCBI chr16:71,779,340...71,783,510
Ensembl chr16:71,779,340...71,783,510
JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3583804 (PMID:15883201)
Ensembl
RGD
PMID:15883201 GO_REF:0000107 NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:138,148,501...138,155,666
JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:2176173|MGI:2677796 (PMID:16543460), (PMID:22411810)
Ensembl
RGD
PMID:16543460 PMID:22411810 GO_REF:0000107 NCBI chr18:27,002,330...27,135,009
Ensembl chr18:26,999,820...27,135,007
JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO
IEA
(PMID:18838552)
GO_REF:0000107
RGD
Ensembl
PMID:18838552 GO_REF:0000107 NCBI chr10:101,874,661...101,900,497
Ensembl chr10:101,874,664...101,900,738
JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO
GO_REF:0000024
(PMID:20974804)
UniProt
RGD
PMID:20974804 GO_REF:0000024 NCBI chr 2:234,454,001...234,559,369
Ensembl chr 2:234,454,001...234,594,649
JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20974804)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20974804 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302
JBrowse link
G Rhoc ras homolog family member C involved_in ISO
IEA
(PMID:20974804)
GO_REF:0000107
RGD
Ensembl
PMID:20974804 GO_REF:0000107 NCBI chr 2:194,975,586...194,981,637
Ensembl chr 2:194,975,242...194,983,745
JBrowse link
G Vcl vinculin involved_in ISO
IEA
(PMID:9700171)
GO_REF:0000107
RGD
Ensembl
PMID:9700171 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,315,069...3,405,163
JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO
IEA
(PMID:25792565)
GO_REF:0000107
RGD
Ensembl
PMID:25792565 GO_REF:0000107 NCBI chr14:76,470,238...76,504,086
Ensembl chr14:76,470,176...76,504,080
JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (PMID:18332111) RGD PMID:18332111 NCBI chr 1:93,310,294...93,379,369
Ensembl chr 1:93,310,278...93,379,320
JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:58,041,641...58,170,505
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (PMID:17403930) RGD PMID:17403930 NCBI chr10:54,361,898...54,373,776
Ensembl chr10:54,361,898...54,373,776
JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 NOT|involved_in ISO (PMID:22832496) RGD PMID:22832496 NCBI chr10:54,329,224...54,353,167
Ensembl chr10:54,329,043...54,353,166
JBrowse link
G Arl2 ARF like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:212,863,422...212,875,425
Ensembl chr 1:212,863,423...212,875,373
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (PMID:15775979) RGD PMID:15775979 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565
JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IEA
(PMID:25753039)
GO_REF:0000107
RGD
Ensembl
PMID:25753039 GO_REF:0000107 NCBI chr19:821,875...860,931
Ensembl chr19:822,464...860,822
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (PMID:24385485) RGD PMID:24385485 NCBI chr 2:184,997,425...185,024,785
Ensembl chr 2:184,997,425...185,023,635
JBrowse link
G Cldn1 claudin 1 involved_in ISO
IEA
IBA
(PMID:25849148), (PMID:26607202)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:25849148 PMID:26607202 GO_REF:0000033 GO_REF:0000107 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:87,926,337...87,941,529
JBrowse link
G Cldn10 claudin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:102,269,858...102,361,589
Ensembl chr15:102,269,858...102,361,589
JBrowse link
G Cldn11 claudin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:114,136,234...114,149,539
Ensembl chr 2:114,136,234...114,149,539
JBrowse link
G Cldn14 claudin 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:46,701,940...46,799,049
Ensembl chr11:46,701,940...46,799,096
JBrowse link
G Cldn15 claudin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:25,334,849...25,345,104
Ensembl chr12:25,334,849...25,343,477
JBrowse link
G Cldn16 claudin 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:87,795,106...87,814,396
Ensembl chr11:87,795,106...87,814,396
JBrowse link
G Cldn18 claudin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,125,819...109,145,110
Ensembl chr 8:109,126,949...109,152,701
JBrowse link
G Cldn19 claudin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:138,148,501...138,155,666
JBrowse link
G Cldn2 claudin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:108,248,383...108,258,847
Ensembl chr  X:108,237,676...108,262,377
JBrowse link
G Cldn24 claudin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,157,524...51,158,186
Ensembl chr16:51,154,408...51,158,385
JBrowse link
G Cldn25 claudin 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,288,411...58,289,145
Ensembl chr 8:58,288,411...58,289,145
JBrowse link
G Cldn3 claudin 3 involved_in IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000107
(PMID:20655293), (PMID:25849148)
GO_Central
Ensembl
RGD
PMID:20655293 PMID:25849148 GO_REF:0000033 GO_REF:0000107 NCBI chr12:27,345,075...27,346,547
Ensembl chr12:27,345,076...27,348,841
JBrowse link
G Cldn34a claudin 34A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,164,586...25,233,074
Ensembl chr  X:25,212,812...25,233,074
JBrowse link
G Cldn34b claudin 34B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,396,219...44,402,241
Ensembl chr  X:44,396,219...44,402,241
JBrowse link
G Cldn34b4 claudin 34B4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,329,083...44,362,148
Ensembl chr  X:44,329,100...44,362,147
JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:94,391,092...94,396,766
Ensembl chr  X:94,391,092...94,396,766
JBrowse link
G Cldn34d claudin 34D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,473,389...44,481,870
Ensembl chr  X:44,473,390...44,481,870
JBrowse link
G Cldn34e claudin 34E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,620,496...45,627,344
Ensembl chr  X:45,620,496...45,627,344
JBrowse link
G Cldn4 claudin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,388,160...27,389,958
Ensembl chr12:27,387,981...27,389,958
JBrowse link
G Cldn5 claudin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:95,717,176...95,719,322
JBrowse link
G Cldn6 claudin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,213,837...13,218,578
Ensembl chr10:13,213,956...13,218,581
JBrowse link
G Cldn7 claudin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,188,670...55,190,871
Ensembl chr10:55,188,684...55,190,905
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797
Ensembl chr11:82,416,853...82,607,797
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO
IEA
(PMID:15254234)
GO_REF:0000107
RGD
Ensembl
PMID:15254234 GO_REF:0000107 NCBI chr 2:111,904,522...111,966,786
Ensembl chr 2:111,904,522...111,966,626
JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:45,426,985...45,437,976
Ensembl chr 8:45,425,731...45,437,973
JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:8,763,889...8,883,558
Ensembl chr16:8,763,956...8,883,551
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO
IEA
(PMID:25152456)
GO_REF:0000107
RGD
Ensembl
PMID:25152456 GO_REF:0000107 NCBI chr 7:70,280,360...70,415,277
Ensembl chr 7:70,285,310...70,415,274
JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:73,602,126...73,650,269
JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:20164257), (PMID:23073616) RGD PMID:20164257 PMID:23073616 NCBI chr 2:33,474,750...33,498,225
Ensembl chr 2:33,462,950...33,498,077
JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in ISO (PMID:20164257) RGD PMID:20164257 NCBI chr19:54,818,180...54,832,871
Ensembl chr19:54,818,180...54,832,871
JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18094055)
UniProt
RGD
PMID:18094055 GO_REF:0000024 NCBI chr12:20,013,037...20,041,795
Ensembl chr12:20,012,985...20,041,795
JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr17:60,135,096...60,401,814
Ensembl chr17:60,137,701...60,401,739
JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:67,192,592...67,250,819
Ensembl chr 7:67,192,393...67,249,584
JBrowse link
G Ocel1 occludin/ELL domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,428...18,079,068
Ensembl chr16:18,077,266...18,079,374
JBrowse link
G Ocln occludin involved_in ISO
IEA
IBA
(PMID:20164257), (PMID:26607202)
GO_REF:0000002
GO_REF:0000033
RGD
InterPro
GO_Central
PMID:20164257 PMID:26607202 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:33,391,303...33,442,207
Ensembl chr 2:33,391,303...33,430,411
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO
IEA
(PMID:25753039)
GO_REF:0000107
RGD
Ensembl
PMID:25753039 GO_REF:0000107 NCBI chr11:82,212,896...82,273,803
Ensembl chr11:82,212,951...82,273,803
JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:71,977,420...72,527,273
Ensembl chr19:71,977,470...72,526,941
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:27336173)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:27336173 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:122,469,223...122,524,993
Ensembl chr 8:122,469,223...122,524,993
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA
(PMID:26607202)
GO_REF:0000107
RGD
Ensembl
PMID:26607202 GO_REF:0000107 NCBI chr10:92,090,263...92,152,002
Ensembl chr10:92,090,235...92,151,839
JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IEA
IBA
(PMID:21940798)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:21940798 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:81,875,348...81,942,046
Ensembl chr  X:81,875,348...81,941,906
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12058051), (PMID:15096524)
UniProt
Ensembl
RGD
PMID:12058051 PMID:15096524 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:177,972,535...177,977,679
Ensembl chr 2:177,972,372...177,977,684
JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS
(PMID:18097473)
GO_REF:0000024
RGD
UniProt
PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,688,703...86,691,231
JBrowse link
G Samt1 spermatogenesis associated multipass transmembrane protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,362,766...26,427,634
Ensembl chr  X:26,362,884...26,365,571
JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:54,522,644...54,525,478
Ensembl chr  X:54,522,644...54,525,478
JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,173,282...26,176,055
Ensembl chr  X:26,173,295...26,176,036
JBrowse link
G Slc39a9 solute carrier family 39, member 9 involved_in IMP
IDA
PMID:27164415
PMID:35625396
UniProt PMID:27164415 PMID:35625396 RGD:155663545, RGD:155663535 NCBI chr 6:106,022,858...106,061,734
Ensembl chr 6:106,022,850...106,071,176
JBrowse link
G Srf serum response factor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:2445832|MGI:3522206 (PMID:20047077)
Ensembl
RGD
PMID:20047077 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:21,924,076...21,933,337
JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,215,626...107,372,398
Ensembl chr10:107,215,633...107,372,402
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:128,260,330...128,505,158
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:2665014 (PMID:17767158)
Ensembl
RGD
PMID:17767158 GO_REF:0000107 NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:162,545,680...162,564,660
JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565
JBrowse link
G Cdh10 cadherin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:70,355,521...70,577,880
Ensembl chr 2:70,357,217...70,578,332
JBrowse link
G Cdh11 cadherin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:2,152,961...2,312,140
Ensembl chr19:2,154,840...2,312,140
JBrowse link
G Cdh12 cadherin 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:72,201,859...73,436,039
Ensembl chr 2:72,886,532...73,436,039
JBrowse link
G Cdh13 cadherin 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:63,258,251...64,296,122
Ensembl chr19:63,258,122...64,296,119
JBrowse link
G Cdh15 cadherin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:67,812,169...67,834,986
Ensembl chr19:67,812,164...67,834,985
JBrowse link
G Cdh17 cadherin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:30,060,090...30,112,226
JBrowse link
G Cdh18 cadherin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:74,548,681...75,550,720
Ensembl chr 2:75,075,595...75,550,720
JBrowse link
G Cdh19 cadherin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:28,450,361...28,561,932
Ensembl chr13:28,451,283...28,533,753
JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:26750727)
GO_REF:0000033
GO_REF:0000024
Ensembl
RGD
GO_Central
UniProt
PMID:26750727 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:8,051,097...8,265,288
JBrowse link
G Cdh20 cadherin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:21,252,272...21,583,526
Ensembl chr13:21,515,123...21,584,349
JBrowse link
G Cdh22 cadherin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:174,264,869...174,389,940
Ensembl chr 3:174,264,869...174,390,142
JBrowse link
G Cdh24 cadherin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,061,588...32,071,323
Ensembl chr15:32,061,588...32,071,283
JBrowse link
G Cdh26 cadherin 26 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:185,898,185...185,950,892
Ensembl chr 3:185,898,431...185,950,892
JBrowse link
G Cdh3 cadherin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,303,414...51,353,900
Ensembl chr19:51,300,083...51,354,257
JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IEA
(PMID:23288152)
GO_REF:0000107
RGD
Ensembl
PMID:23288152 GO_REF:0000107 NCBI chr19:821,875...860,931
Ensembl chr19:822,464...860,822
JBrowse link
G Cdh6 cadherin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:63,801,630...63,952,309
Ensembl chr 2:63,806,135...63,952,287
JBrowse link
G Cdh7 cadherin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:27,186,223...27,336,076
Ensembl chr13:27,187,257...27,336,023
JBrowse link
G Cdh8 cadherin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:5,494,552...5,901,950
Ensembl chr19:5,500,221...5,902,627
JBrowse link
G Cdh9 cadherin 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:67,954,708...68,094,371
Ensembl chr 2:67,955,166...68,094,365
JBrowse link
G Cldn5 claudin 5 involved_in ISO
IEA
(PMID:23288152)
GO_REF:0000107
RGD
Ensembl
PMID:23288152 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:95,717,176...95,719,322
JBrowse link
G Flcn folliculin involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22965878)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22965878 GO_REF:0000024 GO_REF:0000107 NCBI chr10:45,088,164...45,107,581
Ensembl chr10:45,088,167...45,107,309
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456) RGD PMID:24046456 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,922,655...2,932,771
JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:9571235)
UniProt
Ensembl
RGD
PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:16,710,601...16,723,734
JBrowse link
G Hdac7 histone deacetylase 7 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3693627 (PMID:16873063)
Ensembl
RGD
PMID:16873063 GO_REF:0000107 NCBI chr 7:130,803,013...130,841,181
Ensembl chr 7:130,803,013...130,841,017
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component NAS RGD PMID:10362251 RGD:633233 NCBI chr 1:104,983,368...104,986,795
Ensembl chr 1:104,982,771...104,986,078
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:16473946)
Ensembl
RGD
PMID:16473946 GO_REF:0000107 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:25,733,471...25,829,389
JBrowse link
G Pkp4 plakophilin 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:22965878)
Ensembl
RGD
PMID:22965878 GO_REF:0000107 NCBI chr 3:64,040,995...64,244,586
Ensembl chr 3:64,141,771...64,244,586
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20413591)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20413591 GO_REF:0000024 GO_REF:0000107 NCBI chr12:47,599,161...47,638,143
Ensembl chr12:47,599,035...47,638,143
JBrowse link
cell-substrate junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn1 fibronectin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:12867986)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:12867986 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:80,645,507...80,714,137
JBrowse link
G Itga5 integrin subunit alpha 5 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:12867986)
Ensembl
RGD
PMID:12867986 GO_REF:0000107 NCBI chr 7:136,358,097...136,381,305
Ensembl chr 7:136,358,097...136,381,305
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:12867986)
Ensembl
RGD
PMID:12867986 GO_REF:0000107 NCBI chr10:90,009,927...90,067,787
Ensembl chr10:90,009,900...90,067,800
JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:12867986)
Ensembl
RGD
PMID:12867986 GO_REF:0000107 NCBI chr 5:62,583,730...62,613,687
Ensembl chr 5:62,583,731...62,613,687
JBrowse link
G Tns1 tensin 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:2447792 (PMID:9087448)
Ensembl
RGD
PMID:9087448 GO_REF:0000107 NCBI chr 9:82,941,068...83,152,007
Ensembl chr 9:82,941,068...83,152,007
JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29999492)
UniProt
Ensembl
RGD
PMID:29999492 GO_REF:0000024 GO_REF:0000107 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565
JBrowse link
G Dsg3 desmoglein 3 involved_in ISO
IEA
(PMID:9701552)
GO_REF:0000107
RGD
Ensembl
PMID:9701552 GO_REF:0000107 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:12,074,321...12,111,766
JBrowse link
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:20859650), (PMID:9049256)
MGI:1857539 (PMID:9847250)
MGI:1857539 (PMID:18496566), (PMID:8954745)
GO_REF:0000107
RGD
Ensembl
PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 GO_REF:0000107 NCBI chr10:85,800,812...85,827,881
Ensembl chr10:85,800,814...85,827,429
JBrowse link
G Pkp1 plakophilin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27375112)
Ensembl
RGD
PMID:27375112 GO_REF:0000107 NCBI chr13:49,861,340...49,909,162
Ensembl chr13:49,861,340...49,909,162
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:18474624) RGD PMID:18474624 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:98,165,974...98,231,916
JBrowse link
G Pkp3 plakophilin 3 involved_in ISO
IEA
(PMID:20859650)
(PMID:27375112)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:20859650 PMID:27375112 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:205,617,511...205,628,441
Ensembl chr 1:205,617,511...205,628,440
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO
IEA
(PMID:18474624)
GO_REF:0000107
RGD
Ensembl
PMID:18474624 GO_REF:0000107 NCBI chr10:93,388,991...93,787,617
Ensembl chr10:93,388,991...93,787,572
JBrowse link
excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrl2 adhesion G protein-coupled receptor L2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28972101), (PMID:30792275)
UniProt
RGD
PMID:28972101 PMID:30792275 GO_REF:0000024 NCBI chr 2:240,356,176...240,987,246
Ensembl chr 2:240,356,177...240,855,933
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISS
ISO
GO_REF:0000024
(PMID:30792275)
UniProt
RGD
PMID:30792275 GO_REF:0000024 NCBI chr14:26,690,891...27,458,132
Ensembl chr14:26,722,194...27,280,418
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24094106)
UniProt
RGD
PMID:24094106 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:23074245), (PMID:31141683) RGD PMID:23074245 PMID:31141683 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:75,109,858...77,366,258
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO
IEA
(PMID:27418511)
GO_REF:0000107
RGD
Ensembl
PMID:27418511 GO_REF:0000107 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Lrrc4 leucine rich repeat containing 4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:16980967)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:16980967 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:58,398,942...58,402,538
Ensembl chr 4:58,397,302...58,402,808
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:22960622), (PMID:26440732) RGD PMID:22960622 PMID:26440732 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nptn neuroplastin acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:5621191 (PMID:24554721)
Ensembl
RGD
PMID:24554721 GO_REF:0000107 NCBI chr 8:67,892,678...67,959,231
Ensembl chr 8:67,892,702...67,959,236
JBrowse link
G Plxnb2 plexin B2 involved_in IEA
ISO
GO_REF:0000107
(PMID:29981480)
Ensembl
RGD
PMID:29981480 GO_REF:0000107 NCBI chr 7:122,111,917...122,138,201
Ensembl chr 7:122,111,917...122,127,746
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO
IEA
(PMID:27373832)
GO_REF:0000107
RGD
Ensembl
PMID:27373832 GO_REF:0000107 NCBI chr13:45,298,192...45,519,330
Ensembl chr13:45,298,192...45,519,330
JBrowse link
filtration diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:27711214) RGD PMID:27711214 NCBI chr 1:86,607,769...86,615,045
Ensembl chr 1:86,595,180...86,627,257
JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 involved_in ISO
IEA
(PMID:16807302)
GO_REF:0000107
RGD
Ensembl
PMID:16807302 GO_REF:0000107 NCBI chr 6:104,731,485...104,826,312
Ensembl chr 6:104,731,485...104,826,172
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO
IEA
(PMID:16807302)
GO_REF:0000107
RGD
Ensembl
PMID:16807302 GO_REF:0000107 NCBI chr17:62,835,055...62,902,331
Ensembl chr17:62,812,988...62,903,552
JBrowse link
G Actn3 actinin alpha 3 involved_in ISO
IEA
(PMID:16807302)
GO_REF:0000107
RGD
Ensembl
PMID:16807302 GO_REF:0000107 NCBI chr 1:211,588,473...211,604,401
Ensembl chr 1:211,588,474...211,604,401
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3578221 (PMID:15728191)
Ensembl
RGD
PMID:15728191 GO_REF:0000107 NCBI chr15:31,989,796...32,000,042
Ensembl chr15:31,989,799...32,000,042
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:10699171)
Ensembl
RGD
PMID:10699171 GO_REF:0000107 NCBI chr  X:28,525,912...29,062,344
Ensembl chr  X:28,525,917...29,061,244
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134 (PMID:15292044) RGD PMID:15292044 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:23,204,464...23,366,900
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in ISO (PMID:23940119) RGD PMID:23940119 NCBI chr20:13,468,732...13,596,333
Ensembl chr20:13,468,732...13,596,333
JBrowse link
G Cdh11 cadherin 11 involved_in ISO
IEA
(PMID:33811546)
GO_REF:0000107
RGD
Ensembl
PMID:33811546 GO_REF:0000107 NCBI chr19:2,152,961...2,312,140
Ensembl chr19:2,154,840...2,312,140
JBrowse link
G Cgnl1 cingulin-like 1 acts_upstream_of_or_within ISO (PMID:29016873) RGD PMID:29016873 NCBI chr 8:81,154,169...81,305,598
Ensembl chr 8:81,140,091...81,305,747
JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:4419137 (PMID:29162887)
Ensembl
RGD
PMID:29162887 GO_REF:0000107 NCBI chr 8:71,802,329...71,912,739
Ensembl chr 8:71,802,329...71,912,739
JBrowse link
G Cttn cortactin involved_in IMP PMID:18768925 UniProt PMID:18768925 RGD:10047281 NCBI chr 1:209,029,048...209,064,577
Ensembl chr 1:209,029,048...209,058,211
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (PMID:15710412) RGD PMID:15710412 NCBI chr16:61,954,177...62,374,819
Ensembl chr16:61,995,001...62,374,819
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO
IEA
(PMID:21356350)
(PMID:18483218)
GO_REF:0000107
RGD
Ensembl
PMID:18483218 PMID:21356350 GO_REF:0000107 NCBI chr15:21,162,603...21,257,995
Ensembl chr15:21,162,605...21,258,115
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:15591055 RGD:8693310 NCBI chr 2:48,253,412...48,354,509
Ensembl chr 2:48,253,412...48,354,509
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 IMP RGD PMID:14585963 RGD:1581775 NCBI chr10:13,610,000...13,687,226
Ensembl chr10:13,610,063...13,679,181
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO
IEA
(PMID:23105102)
GO_REF:0000107
RGD
Ensembl
PMID:23105102 GO_REF:0000107 NCBI chr 8:65,501,068...65,715,768
Ensembl chr 8:65,505,043...65,715,111
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in ISO
IEA
(PMID:20660631)
GO_REF:0000107
RGD
Ensembl
PMID:20660631 GO_REF:0000107 NCBI chr 2:185,317,319...185,361,859
Ensembl chr 2:185,317,319...185,360,476
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:14585963 RGD:1581775 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:44,531,249...44,656,806
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K involved_in ISO (PMID:15899872) RGD PMID:15899872 NCBI chr 1:18,557,091...19,056,297
Ensembl chr 1:18,558,365...19,056,107
JBrowse link
G Pxn paxillin acts_upstream_of_or_within ISO (PMID:14636584) RGD PMID:14636584 NCBI chr12:46,721,546...46,768,706
Ensembl chr12:46,721,546...46,768,697
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO
IEA
(PMID:19738201)
GO_REF:0000107
RGD
Ensembl
PMID:19738201 GO_REF:0000107 NCBI chr 5:158,277,476...158,300,294
Ensembl chr 5:158,277,476...158,300,294
JBrowse link
G Rhod ras homolog family member D involved_in ISO
IEA
(PMID:23087206)
GO_REF:0000107
RGD
Ensembl
PMID:23087206 GO_REF:0000107 NCBI chr 1:211,138,126...211,153,953
Ensembl chr 1:211,138,126...211,152,061
JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 acts_upstream_of_or_within ISO MGI:6316664 (PMID:25071083) RGD PMID:25071083 NCBI chr 7:109,272,676...109,283,444
Ensembl chr 7:109,272,715...109,283,444
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:9461600)
UniProt
RGD
PMID:9461600 GO_REF:0000024 NCBI chr 1:249,057,324...249,279,703
Ensembl chr 1:249,057,324...249,279,608
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:21411625) RGD PMID:21411625 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:166,511,985...166,559,462
JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:5788726 (PMID:26437238)
Ensembl
RGD
PMID:26437238 GO_REF:0000107 NCBI chr 6:11,596,726...11,646,098
Ensembl chr 6:11,572,905...11,615,635
JBrowse link
G Taok2 TAO kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:10660600)
Ensembl
RGD
PMID:10660600 GO_REF:0000107 NCBI chr 1:190,906,236...190,925,359
Ensembl chr 1:190,906,239...190,925,140
JBrowse link
G Tesk2 testis associated actin remodelling kinase 2 involved_in IMP PMID:11418599 UniProt PMID:11418599 RGD:727318 NCBI chr 5:135,415,352...135,507,226
Ensembl chr 5:135,443,732...135,507,924
JBrowse link
G Thsd1 thrombospondin type 1 domain containing 1 involved_in ISO (PMID:29069646) RGD PMID:29069646 NCBI chr16:76,473,026...76,507,404
Ensembl chr16:76,473,859...76,503,951
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IDA PMID:15093746 UniProt PMID:15093746 RGD:8553684 NCBI chr 8:53,286,396...53,291,541
Ensembl chr 8:53,286,148...53,291,540
JBrowse link
G Tspan11 tetraspanin 11 involved_in ISS
ISO
GO_REF:0000024
(PMID:31030082)
UniProt
RGD
PMID:31030082 GO_REF:0000024 NCBI chr 4:162,424,327...162,491,653
Ensembl chr 4:162,424,549...162,492,932
JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules involved_in ISO
IEA
(PMID:23087206)
GO_REF:0000107
RGD
Ensembl
PMID:23087206 GO_REF:0000107 NCBI chr 1:144,935,588...144,963,989
Ensembl chr 1:144,935,618...144,964,385
JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 IMP RGD PMID:12577316 RGD:2289808 NCBI chr18:27,002,330...27,135,009
Ensembl chr18:26,999,820...27,135,007
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in TAS PMID:15709751 UniProt PMID:15709751 RGD:8554661 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:36,302,352...36,319,689
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO
IEA
(PMID:16790700), (PMID:22247482), (PMID:23348765)
GO_REF:0000107
RGD
Ensembl
PMID:16790700 PMID:22247482 PMID:23348765 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:187,234,674...187,318,512
JBrowse link
G Gjb2 gap junction protein, beta 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12767933)
(PMID:24590285)
RGD PMID:12767933 PMID:24590285 NCBI chr15:35,375,977...35,393,817
Ensembl chr15:35,375,692...35,393,877
JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:35,400,147...35,410,649
Ensembl chr15:35,398,770...35,410,849
JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in ISO (PMID:22982984) RGD PMID:22982984 NCBI chr10:88,262,840...88,285,646
Ensembl chr10:88,249,489...88,285,853
JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISO
IEA
(PMID:12154091)
GO_REF:0000107
RGD
Ensembl
PMID:12154091 GO_REF:0000107 NCBI chr10:84,429,923...84,432,011
Ensembl chr10:84,429,036...84,433,870
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:17673670 RGD:6784510 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:98,165,974...98,231,916
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:15620359)
MGI:2679447 (PMID:29107521)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:29107521 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15620359)
(PMID:21424692)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO MGI:2681835 (PMID:29107521)
MGI:6119690 (PMID:29107521)
RGD PMID:29107521 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:25025157)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25025157 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:33,761,338...33,764,207
Ensembl chr 3:33,761,353...33,764,323
JBrowse link
hemidesmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col17a1 collagen type XVII alpha 1 chain involved_in ISO
IEA
(PMID:12482924)
GO_REF:0000107
RGD
Ensembl
PMID:12482924 GO_REF:0000107 NCBI chr 1:256,472,648...256,518,857
Ensembl chr 1:256,472,648...256,518,851
JBrowse link
G Dst dystonin involved_in ISO (PMID:12482924) RGD PMID:12482924 NCBI chr 9:43,631,716...44,025,535
Ensembl chr 9:43,631,517...44,025,533
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in IEA
ISO
GO_REF:0000002
(PMID:12482924), (PMID:23496044)
GO_REF:0000107
InterPro
RGD
Ensembl
PMID:12482924 PMID:23496044 GO_REF:0000002 GO_REF:0000107 NCBI chr10:101,705,592...101,741,933
Ensembl chr10:101,705,587...101,741,932
JBrowse link
G Lama3 laminin subunit alpha 3 IMP RGD PMID:8923212 RGD:633107 NCBI chr18:3,797,898...4,033,021
Ensembl chr18:3,797,939...4,026,449
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO
IEA
(PMID:15159456)
GO_REF:0000107
RGD
Ensembl
PMID:15159456 GO_REF:0000107 NCBI chr13:67,924,872...68,051,986
Ensembl chr13:67,924,872...68,051,986
JBrowse link
G Plec plectin involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:12482924)
UniProt
GO_Central
Ensembl
RGD
PMID:12482924 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:109,768,447...109,828,089
JBrowse link
inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln4 cerebellin 4 precursor involved_in IEA
ISO
GO_REF:0000107
(PMID:25534236), (PMID:30679375)
Ensembl
RGD
PMID:25534236 PMID:30679375 GO_REF:0000107 NCBI chr 3:181,218,046...181,225,600
Ensembl chr 3:181,218,046...181,225,600
JBrowse link
G Clstn2 calsyntenin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:26171716)
Ensembl
RGD
PMID:26171716 GO_REF:0000107 NCBI chr 8:106,899,894...107,516,402
Ensembl chr 8:106,899,894...107,040,053
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24094106)
UniProt
RGD
PMID:24094106 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:23074245), (PMID:31141683) RGD PMID:23074245 PMID:31141683 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:75,109,858...77,366,258
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:40473926) RGD PMID:40473926 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:30679375)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30679375 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:142,312,381...142,838,581
Ensembl chr  X:142,312,391...142,423,536
JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha 1 involved_in ISS
ISO
IBA
IEA
GO_REF:0000024
(PMID:27129275)
GO_REF:0000033
GO_REF:0000107
(PMID:23909897), (PMID:25489750)
UniProt
RGD
GO_Central
Ensembl
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:27,096,731...27,152,563
Ensembl chr10:27,096,740...27,152,442
JBrowse link
G Gabra2 gamma-aminobutyric acid type A receptor subunit alpha 2 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:27129275)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:27129275 GO_REF:0000024 GO_REF:0000033 NCBI chr14:37,451,218...37,587,458
Ensembl chr14:37,450,683...37,587,457
JBrowse link
G Gabra3 gamma-aminobutyric acid type A receptor subunit alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:155,301,979...155,543,870
Ensembl chr  X:155,303,928...155,543,863
JBrowse link
G Gabra4 gamma-aminobutyric acid type A receptor subunit alpha 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:36,944,747...37,021,652
Ensembl chr14:36,944,388...37,021,648
JBrowse link
G Gabra5 gamma-aminobutyric acid type A receptor subunit alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:117,404,446...117,517,424
Ensembl chr 1:117,404,494...117,516,635
JBrowse link
G Gabra6 gamma-aminobutyric acid type A receptor subunit alpha6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:27,311,965...27,327,337
Ensembl chr10:27,311,979...27,327,234
JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta 2 involved_in ISO
IEA
ISS
(PMID:23909897), (PMID:25489750)
(PMID:27129275)
GO_REF:0000117
GO_REF:0000107
GO_REF:0000024
RGD
UniProt
Ensembl
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 NCBI chr10:27,438,127...27,657,680
Ensembl chr10:27,438,238...27,655,171
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 involved_in ISO
ISS
(PMID:25489750)
(PMID:27129275)
GO_REF:0000024
RGD
UniProt
PMID:25489750 PMID:27129275 GO_REF:0000024 NCBI chr 1:117,602,772...117,838,230
Ensembl chr 1:117,431,842...117,836,725
JBrowse link
G Gabre gamma-aminobutyric acid type A receptor subunit epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:155,102,078...155,120,821
Ensembl chr  X:155,102,083...155,120,735
JBrowse link
G Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:37,750,292...37,821,651
Ensembl chr14:37,750,292...37,989,945
JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma 2 involved_in IEA
ISO
IBA
ISS
GO_REF:0000107
(PMID:27129275)
GO_REF:0000033
GO_REF:0000024
(PMID:23909897), (PMID:25489750)
Ensembl
RGD
GO_Central
UniProt
PMID:23909897 PMID:25489750 PMID:27129275 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:26,876,926...26,965,523
Ensembl chr10:26,876,926...26,965,523
JBrowse link
G Gabrg3 gamma-aminobutyric acid type A receptor subunit gamma 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:116,763,332...117,386,770
Ensembl chr 1:116,763,129...117,382,536
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 involved_in ISO (PMID:30125937) RGD PMID:30125937 NCBI chr16:19,367,041...19,375,173
Ensembl chr16:19,367,041...19,375,442
JBrowse link
G Lgi2 leucine-rich repeat LGI family, member 2 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:30679375)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:30679375 GO_REF:0000033 GO_REF:0000107 NCBI chr14:62,628,746...62,656,231
Ensembl chr14:62,596,150...62,656,188
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) RGD PMID:23358245 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:22960622)
Ensembl
RGD
PMID:22960622 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Npas4 neuronal PAS domain protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18815592)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18815592 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:211,710,640...211,728,038
Ensembl chr 1:211,711,338...211,716,102
JBrowse link
G Plxnb1 plexin B1 involved_in IEA
ISO
GO_REF:0000107
(PMID:23699507), (PMID:29981480)
Ensembl
RGD
PMID:23699507 PMID:29981480 GO_REF:0000107 NCBI chr 8:118,621,961...118,647,491
Ensembl chr 8:118,623,040...118,647,489
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISO
IEA
(PMID:27373832)
GO_REF:0000107
RGD
Ensembl
PMID:27373832 GO_REF:0000107 NCBI chr13:45,298,192...45,519,330
Ensembl chr13:45,298,192...45,519,330
JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr16:76,021,968...76,075,717
Ensembl chr16:76,022,008...76,081,911
JBrowse link
G Mir105 microRNA 105 acts_upstream_of ISO (PMID:24735924) RGD PMID:24735924 NCBI chr  X:155,480,841...155,480,913 JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:27277258) RGD PMID:27277258 NCBI chr10:73,055,104...73,055,190
Ensembl chr10:73,055,097...73,055,207
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,387,360...1,509,147
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:45,407,965...45,502,771
JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:106,417,680...106,420,540
Ensembl chr 5:106,417,680...106,420,566
JBrowse link
G Tnf tumor necrosis factor involved_in ISO
IEA
(PMID:25816133)
GO_REF:0000107
RGD
Ensembl
PMID:25816133 GO_REF:0000107 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
JBrowse link
negative regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:23769722 GO_REF:0000033, RGD:152975632 NCBI chr14:6,412,841...6,587,238
Ensembl chr14:6,412,841...6,587,171
JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:134,118,024...134,135,305
JBrowse link
G Apod apolipoprotein D involved_in ISS
ISO
GO_REF:0000024
(PMID:21705670)
UniProt
RGD
PMID:21705670 GO_REF:0000024 NCBI chr11:82,936,216...82,957,264
Ensembl chr11:82,936,038...82,957,263
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in ISO
IEA
(PMID:10699171)
GO_REF:0000107
RGD
Ensembl
PMID:10699171 GO_REF:0000107 NCBI chr  X:28,525,912...29,062,344
Ensembl chr  X:28,525,917...29,061,244
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:122,555,532...122,736,934
Ensembl chr 8:122,555,524...122,737,587
JBrowse link
G Coro1c coronin 1C involved_in ISO
IEA
(PMID:19913511)
GO_REF:0000107
RGD
Ensembl
PMID:19913511 GO_REF:0000107 NCBI chr12:48,373,573...48,445,718
Ensembl chr12:48,373,597...48,445,716
JBrowse link
G Cul5 cullin 5 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:35512830)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:35512830 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:62,909,150...62,974,641
Ensembl chr 8:62,912,193...62,965,463
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO
IEA
(PMID:19158340)
GO_REF:0000107
RGD
Ensembl
PMID:19158340 GO_REF:0000107 NCBI chr16:61,954,177...62,374,819
Ensembl chr16:61,995,001...62,374,819
JBrowse link
G Dmtn dematin actin binding protein involved_in IEA
ISO
GO_REF:0000107
(PMID:18505823)
Ensembl
RGD
PMID:18505823 GO_REF:0000107 NCBI chr15:52,087,667...52,111,956
Ensembl chr15:52,087,667...52,112,128
JBrowse link
G Dusp22 dual specificity phosphatase 22 involved_in ISO (PMID:20018849) RGD PMID:20018849 NCBI chr17:33,989,637...34,040,021
Ensembl chr17:33,989,637...34,039,895
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO
IEA
ISS
(PMID:20543869)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20543869 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,038,726...19,060,644
Ensembl chr15:19,038,616...19,065,219
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO
IEA
(PMID:12473654)
(PMID:18227284)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12473654 PMID:18227284 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:46,549,994...46,564,735
Ensembl chr 6:46,549,999...46,564,398
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:20197276 RGD:13800550 NCBI chr 7:65,265,639...65,346,196
Ensembl chr 7:65,265,639...65,346,196
JBrowse link
G Mmp14 matrix metallopeptidase 14 IDA RGD PMID:15044209 RGD:1582604 NCBI chr15:31,857,824...31,867,049
Ensembl chr15:31,857,546...31,869,893
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr11:68,321,738...68,540,724
Ensembl chr11:68,355,959...68,540,734
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9616126) RGD PMID:9616126 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Rab40c Rab40c, member RAS oncogene family involved_in ISO (PMID:35512830) RGD PMID:35512830 NCBI chr10:15,405,436...15,440,659 JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:19738201)
Ensembl
RGD
PMID:19738201 GO_REF:0000107 NCBI chr 5:158,277,476...158,300,294
Ensembl chr 5:158,277,476...158,300,294
JBrowse link
G Rnf7 ring finger protein 7 involved_in ISO
IEA
(PMID:35512830)
GO_REF:0000107
RGD
Ensembl
PMID:35512830 GO_REF:0000107 NCBI chr 8:105,918,395...105,927,643
Ensembl chr 8:105,918,395...105,927,405
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:166,511,985...166,559,462
JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 NCBI chr10:91,410,129...91,430,246
Ensembl chr10:91,409,819...91,430,942
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:11090614) RGD PMID:11090614 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
JBrowse link
G Mir23a microRNA 23a IMP RGD PMID:25798059 RGD:13592600 NCBI chr19:40,859,769...40,859,843 JBrowse link
negative regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:24467251)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24467251 GO_REF:0000024 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
negative regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within ISO (PMID:30902970) RGD PMID:30902970 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:37,506,408...37,722,971
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:29643768)
Ensembl
RGD
PMID:29643768 GO_REF:0000107 NCBI chr 1:237,794,969...237,798,650
Ensembl chr 1:237,794,969...237,798,650
JBrowse link
negative regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha7 Eph receptor A7 involved_in IEA
ISO
GO_REF:0000107
(PMID:19036963)
Ensembl
RGD
PMID:19036963 GO_REF:0000107 NCBI chr 5:47,771,776...47,925,189
Ensembl chr 5:47,771,865...47,925,058
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 IDA RGD PMID:23358245 RGD:9743980 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Negr1 neuronal growth regulator 1 IDA RGD PMID:19711485 RGD:596948412 NCBI chr 2:248,283,164...249,015,538
Ensembl chr 2:248,283,353...249,018,410
JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO MGI:1857596 (PMID:15378065) RGD PMID:15378065 NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:107,015,733...107,172,091
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:27893610 RGD:243048440 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302
JBrowse link
G Robo1 roundabout guidance receptor 1 IMP RGD PMID:27893610 RGD:243048440 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:24,067,878...25,108,694
JBrowse link
G Slit1 slit guidance ligand 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:250,358,917...250,507,476
Ensembl chr 1:250,358,919...250,507,476
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (PMID:22198949) RGD PMID:22198949 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(PMID:18986540)
Ensembl
RGD
PMID:18986540 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
JBrowse link
negative regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:8,051,097...8,265,288
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (PMID:20534458) RGD PMID:20534458 NCBI chr 4:15,278,518...16,762,427
Ensembl chr 4:15,278,518...16,762,199
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21424692)
(PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 IEP RGD PMID:16687515 RGD:1599119 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:218,052,555...218,537,259
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:14715942)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14715942 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:159,942,553...159,975,463
Ensembl chr 4:159,942,560...159,975,444
JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO
TAS
GO_REF:0000024
MGI:3026869 (PMID:16551741), (PMID:16687515), (PMID:19816196)
(PMID:27818385)
PMID:19166515
BHF-UCL
RGD
PMID:16551741 PMID:16687515 PMID:19816196 PMID:27818385 PMID:19166515 GO_REF:0000024, RGD:6483326 NCBI chr10:86,610,140...86,625,896
Ensembl chr10:86,611,890...86,631,730
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO (PMID:21966409) RGD PMID:21966409 NCBI chr 9:116,502,864...116,707,274
Ensembl chr 9:116,462,807...116,707,274
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (PMID:19270340) RGD PMID:19270340 NCBI chr19:69,719,707...69,746,244
Ensembl chr19:69,719,394...69,746,244
JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within ISO MGI:3808598|MGI:4837620 (PMID:16337912), (PMID:20371806) RGD PMID:16337912 PMID:20371806 NCBI chr13:46,549,369...46,735,989
Ensembl chr13:46,549,369...46,736,139
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (PMID:16436605) RGD PMID:16436605 NCBI chr10:48,294,932...48,324,941
Ensembl chr10:48,297,437...48,324,940
JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:16551741)
Ensembl
RGD
PMID:16551741 GO_REF:0000107 NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:216,938,990...217,007,167
JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO UniProtKB:Q9UK05 (PMID:32561494) RGD PMID:32561494 NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:134,118,024...134,135,305
JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:87,926,337...87,941,529
JBrowse link
G Cldn5 claudin 5 involved_in ISO
IEA
(PMID:25323998)
GO_REF:0000107
RGD
Ensembl
PMID:25323998 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:95,717,176...95,719,322
JBrowse link
G Dsg3 desmoglein 3 involved_in ISO (PMID:22796473) RGD PMID:22796473 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:12,074,321...12,111,766
JBrowse link
G Epha2 Eph receptor A2 involved_in ISO
IEA
(PMID:27815408)
GO_REF:0000107
RGD
Ensembl
PMID:27815408 GO_REF:0000107 NCBI chr 5:158,888,629...158,917,100
Ensembl chr 5:158,888,629...158,917,234
JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:67,522,489...67,531,533
Ensembl chr 3:67,522,489...67,531,533
JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO
IEA
(PMID:32561494)
GO_REF:0000107
RGD
Ensembl
PMID:32561494 GO_REF:0000107 NCBI chr16:9,261,679...9,267,678
Ensembl chr16:9,261,662...9,267,677
JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO
GO_REF:0000107
(PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107 NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:30,640,844...30,644,331
JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 3:135,413,927...135,469,505
Ensembl chr 3:135,413,927...135,469,505
JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO
IEA
(PMID:19755384)
GO_REF:0000107
RGD
Ensembl
PMID:19755384 GO_REF:0000107 NCBI chr 5:168,270,522...168,356,393
Ensembl chr 5:168,271,073...168,358,242
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
ISS
(PMID:22796473)
GO_REF:0000024
RGD
UniProt
PMID:22796473 GO_REF:0000024 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109
JBrowse link
positive regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb3 crumbs cell polarity complex component 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:21145499)
Ensembl
RGD
PMID:21145499 GO_REF:0000107 NCBI chr 9:1,985,504...1,990,855
Ensembl chr 9:1,983,619...1,993,486
JBrowse link
G Flot1 flotillin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:2,922,662...2,932,906
Ensembl chr20:2,922,655...2,932,771
JBrowse link
positive regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema4a semaphorin 4A involved_in IEA
ISO
GO_REF:0000107
(PMID:29981480)
Ensembl
RGD
PMID:29981480 GO_REF:0000107 NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:176,194,255...176,212,258
JBrowse link
G Vstm5 V-set and transmembrane domain containing 5 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:27683913)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:27683913 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:20,361,474...20,381,844
Ensembl chr 8:20,361,473...20,381,828
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA
(PMID:21670302)
GO_REF:0000107
RGD
Ensembl
PMID:21670302 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO
IEA
(PMID:24863063)
GO_REF:0000107
RGD
Ensembl
PMID:24863063 GO_REF:0000107 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:35,377,391...35,480,846
JBrowse link
G Ankrd28 ankyrin repeat domain 28 involved_in IEA
ISO
GO_REF:0000107
(PMID:35512830)
Ensembl
RGD
PMID:35512830 GO_REF:0000107 NCBI chr16:6,924,868...7,056,593
Ensembl chr16:6,924,882...7,056,593
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:212,226,121...212,231,353
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in ISO
IEA
(PMID:24466237)
GO_REF:0000107
RGD
Ensembl
PMID:24466237 GO_REF:0000107 NCBI chr 5:147,672,559...147,727,007
Ensembl chr 5:147,672,601...147,727,011
JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:62,909,150...62,974,641
Ensembl chr 8:62,912,193...62,965,463
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:88,092,140...88,214,758
Ensembl chr 7:88,092,140...88,214,957
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3822451 (PMID:18794329)
Ensembl
RGD
PMID:18794329 GO_REF:0000107 NCBI chr13:33,221,705...33,321,400
Ensembl chr13:33,223,589...33,321,133
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO
IEA
(PMID:29496737)
GO_REF:0000107
RGD
Ensembl
PMID:29496737 GO_REF:0000107 NCBI chr15:21,162,603...21,257,995
Ensembl chr15:21,162,605...21,258,115
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3800994 (PMID:18560567) RGD PMID:18560567 NCBI chr 3:120,555,445...120,939,978
Ensembl chr 3:120,555,431...120,933,124
JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
ISS
(PMID:14744774), (PMID:16436387)
GO_REF:0000024
RGD
UniProt
PMID:14744774 PMID:16436387 GO_REF:0000024 NCBI chr11:91,559,087...91,573,982
Ensembl chr11:91,559,091...91,573,982
JBrowse link
G Hrgl1 histidine-rich glycoprotein like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:91,543,964...91,553,946
Ensembl chr11:91,543,969...91,553,946
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP RGD PMID:23657573 RGD:11049552 NCBI chr 1:144,088,788...144,178,989
Ensembl chr 1:144,088,793...144,179,043
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17654484)
Ensembl
RGD
PMID:17654484 GO_REF:0000107 NCBI chr 6:46,549,994...46,564,735
Ensembl chr 6:46,549,999...46,564,398
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:12820653)
Ensembl
RGD
PMID:12820653 GO_REF:0000107 NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,572,049...32,615,192
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (PMID:25490267) RGD PMID:25490267 NCBI chr 9:49,696,573...49,822,353
Ensembl chr 9:49,696,700...49,822,353
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:21598299 RGD:12798522 NCBI chr 7:111,224,291...111,304,963
Ensembl chr 7:111,224,291...111,304,963
JBrowse link
G Myoc myocilin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18855004)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:77,509,963...77,520,361
Ensembl chr13:77,509,963...77,520,361
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:73,256,557...73,411,705
Ensembl chr19:73,256,557...73,411,702
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 IMP RGD PMID:30354218 RGD:124713558 NCBI chr10:63,905,287...63,915,655
Ensembl chr10:63,904,691...63,915,655
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20016286)
UniProt
Ensembl
RGD
PMID:20016286 GO_REF:0000024 GO_REF:0000107 NCBI chr11:97,568,627...97,598,613
Ensembl chr11:97,568,625...97,598,545
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP RGD PMID:16905534 RGD:39456088 NCBI chr12:41,026,079...41,085,577
Ensembl chr12:41,043,785...41,085,577
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO
IEA
(PMID:21091576)
GO_REF:0000107
RGD
Ensembl
PMID:21091576 GO_REF:0000107 NCBI chr 3:96,861,785...97,017,702
Ensembl chr 3:96,861,785...97,017,656
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109
JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:105,918,395...105,927,643
Ensembl chr 8:105,918,395...105,927,405
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:17654484)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17654484 GO_REF:0000024 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,387,360...1,509,147
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:181,904,454...181,913,101
Ensembl chr 2:181,904,261...181,913,103
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:173,574,239...173,592,923
Ensembl chr 3:173,574,239...173,593,670
JBrowse link
G Smad3 SMAD family member 3 IDA RGD PMID:15987742 RGD:2300418 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:73,024,760...73,132,324
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:18425120) RGD PMID:18425120 NCBI chr 5:114,722,815...114,849,535
Ensembl chr 5:114,723,006...114,849,991
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO
IBA
IEA
ISS
(PMID:18346467)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:18346467 PMID:18346467 GO_REF:0000033 GO_REF:0000107, RGD:12793016 NCBI chr 8:53,286,396...53,291,541
Ensembl chr 8:53,286,148...53,291,540
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO
IEA
(PMID:10806479)
GO_REF:0000107
RGD
Ensembl
PMID:10806479 GO_REF:0000107 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA
ISS
(PMID:16489009)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16489009 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:22,439,392...22,468,194
JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01112 (PMID:23027131)
Ensembl
RGD
PMID:23027131 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:154,797,311...154,817,128
JBrowse link
positive regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO
IEA
(PMID:12967627)
GO_REF:0000107
RGD
Ensembl
PMID:12967627 GO_REF:0000107 NCBI chr  X:33,925,458...33,972,851
Ensembl chr  X:33,925,458...33,971,596
JBrowse link
G Agt angiotensinogen involved_in ISO
IEA
UniProtKB:P00797 (PMID:17416596)
GO_REF:0000107
RGD
Ensembl
PMID:17416596 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:69,421,638...69,446,944
JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:46,600,738...46,639,740
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO
IEA
(PMID:33238150)
GO_REF:0000107
RGD
Ensembl
PMID:33238150 GO_REF:0000107 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:75,109,858...77,366,258
JBrowse link
G Hopx HOP homeobox involved_in IEA
ISO
GO_REF:0000107
(PMID:15790958)
Ensembl
RGD
PMID:15790958 GO_REF:0000107 NCBI chr14:31,410,235...31,437,189
Ensembl chr14:31,410,221...31,437,188
JBrowse link
G Irx3 iroquois homeobox 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:21825130), (PMID:26786475)
Ensembl
RGD
PMID:21825130 PMID:26786475 GO_REF:0000107 NCBI chr19:31,384,803...31,388,241
Ensembl chr19:31,384,833...31,388,238
JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:22728936)
Ensembl
RGD
PMID:22728936 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:42,348,485...42,395,359
JBrowse link
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:35420982)
UniProt
RGD
PMID:35420982 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Sema4a semaphorin 4A involved_in IEA
ISO
GO_REF:0000107
(PMID:29981480)
Ensembl
RGD
PMID:29981480 GO_REF:0000107 NCBI chr 2:176,194,248...176,215,752
Ensembl chr 2:176,194,255...176,212,258
JBrowse link
G Sema4d semaphorin 4D involved_in IEA
ISO
GO_REF:0000107
(PMID:23699507), (PMID:29981480)
Ensembl
RGD
PMID:23699507 PMID:29981480 GO_REF:0000107 NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,582,098...13,688,891
JBrowse link
positive regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 IMP RGD PMID:17626212 RGD:152995392 NCBI chr10:54,773,282...54,780,727
Ensembl chr10:54,773,282...54,797,651
JBrowse link
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IDA PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nrxn1 neurexin 1 involved_in TAS PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
positive regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:18430734 RGD:2306201 NCBI chr13:39,353,413...39,396,509
Ensembl chr13:39,353,079...39,396,711
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 7:108,293,681...108,365,892
Ensembl chr 7:108,293,818...108,365,870
JBrowse link
G Adgrb2 adhesion G protein-coupled receptor B2 acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
(PMID:24613359)
GO_REF:0000117
Ensembl
RGD
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:147,581,573...147,646,726
Ensembl chr 5:147,611,580...147,646,726
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
(PMID:24613359)
GO_REF:0000117
Ensembl
RGD
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:34,917,474...35,645,350
Ensembl chr 9:34,917,474...35,644,811
JBrowse link
G Adgre5 adhesion G protein-coupled receptor E5 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr19:41,302,687...41,332,183
Ensembl chr19:41,303,213...41,324,641
JBrowse link
G Adgrl1 adhesion G protein-coupled receptor L1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr19:41,107,162...41,148,752
Ensembl chr19:41,109,117...41,148,896
JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 2:240,356,176...240,987,246
Ensembl chr 2:240,356,177...240,855,933
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr14:26,690,891...27,458,132
Ensembl chr14:26,722,194...27,280,418
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA RGD PMID:15800376 RGD:2312779 NCBI chr 3:177,310,258...177,340,379
Ensembl chr 3:177,310,258...177,336,188
JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:198,511,285...198,516,744
Ensembl chr 2:198,511,039...198,521,146
JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:130,270,639...130,273,735
Ensembl chr 7:130,270,554...130,282,218
JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:117,620,499...117,622,025
Ensembl chr 8:117,616,629...117,626,577
JBrowse link
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO MGI:2180111 (PMID:19571134) RGD PMID:19571134 NCBI chr10:66,368,308...67,438,237
Ensembl chr10:66,368,310...66,636,245
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1096391 (PMID:21356198)
Ensembl
RGD
PMID:21356198 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:21356198)
Ensembl
RGD
PMID:21356198 GO_REF:0000107 NCBI chr18:82,215,210...82,222,648
Ensembl chr18:82,215,220...82,222,648
JBrowse link
G Clstn1 calsyntenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:1929897|MGI:2178323 (PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:165,314,128...165,377,627
Ensembl chr 5:165,314,309...165,377,625
JBrowse link
G Clstn2 calsyntenin 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:1929895|MGI:2178323 (PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:106,899,894...107,516,402
Ensembl chr 8:106,899,894...107,040,053
JBrowse link
G Clstn3 calsyntenin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:1929895|MGI:1929897 (PMID:24613359)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Cux2 cut-like homeobox 2 involved_in ISO (PMID:20510857) RGD PMID:20510857 NCBI chr12:40,168,402...40,368,303
Ensembl chr12:40,149,292...40,366,528
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IMP RGD PMID:26738857 RGD:243048441 NCBI chr10:55,239,397...55,267,780
Ensembl chr10:55,236,869...55,265,839
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:25232112)
Ensembl
RGD
PMID:25232112 GO_REF:0000107 NCBI chr15:125,287...237,334
Ensembl chr15:125,290...237,332
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IMP RGD PMID:20427644 RGD:10401235 NCBI chr 1:184,824,420...184,888,048
Ensembl chr 1:184,824,420...184,888,048
JBrowse link
G Efna5 ephrin A5 involved_in ISO (PMID:19036963) RGD PMID:19036963 NCBI chr 9:109,763,786...110,042,396
Ensembl chr 9:109,767,252...110,042,348
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:14691139)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14691139 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:111,386,432...111,823,759
Ensembl chr 8:111,386,432...111,823,759
JBrowse link
G Ephb2 Eph receptor B2 involved_in IMP
ISO
IEA
(PMID:14691139), (PMID:21029865)
GO_REF:0000107
RGD
Ensembl
PMID:14691139 PMID:21029865 PMID:21364901 GO_REF:0000107, RGD:127285794 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Ephb3 Eph receptor B3 involved_in IEA
ISO
GO_REF:0000107
(PMID:14691139)
Ensembl
RGD
PMID:14691139 GO_REF:0000107 NCBI chr11:93,345,098...93,363,775
Ensembl chr11:93,345,098...93,363,775
JBrowse link
G Flrt1 fibronectin leucine rich transmembrane protein 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 1:213,704,983...213,782,958
Ensembl chr 1:213,704,038...213,782,981
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 6:120,507,998...120,603,133
Ensembl chr 6:120,507,689...120,609,004
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 3:148,448,115...148,461,458
Ensembl chr 3:148,439,354...148,461,650
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide acts_upstream_of_or_within ISO
IEA
(PMID:16491079)
MGI:3045041 (PMID:16491079)
GO_REF:0000107
RGD
Ensembl
PMID:16491079 GO_REF:0000107 NCBI chr 4:148,421,315...148,431,128
Ensembl chr 4:148,421,315...148,425,969
JBrowse link
G Gprasp3 G protein-coupled receptor associated sorting protein family member 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:21199326)
Ensembl
RGD
PMID:21199326 GO_REF:0000107 NCBI chr  X:103,639,366...103,644,561
Ensembl chr  X:103,609,243...103,650,463
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO
IEA
(PMID:27418511)
GO_REF:0000107
RGD
Ensembl
PMID:27418511 GO_REF:0000107 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISS
ISO
GO_REF:0000024
(PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 NCBI chr11:87,567,813...87,704,346
Ensembl chr11:87,575,116...87,704,342
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:25908590)
UniProt
RGD
PMID:25908590 GO_REF:0000024 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:55,328,964...56,826,613
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 IMP RGD PMID:26884337 RGD:11560558 NCBI chr 4:124,725,917...125,045,351
Ensembl chr 4:124,725,917...125,045,550
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 IMP RGD PMID:26884337 RGD:11560558 NCBI chr  X:24,734,202...24,816,566
Ensembl chr  X:24,734,246...24,816,566
JBrowse link
G Lingo2 leucine rich repeat and Ig domain containing 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 5:55,166,250...56,488,672
Ensembl chr 5:55,156,997...56,489,155
JBrowse link
G Lingo4 leucine rich repeat and Ig domain containing 4 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 2:184,724,554...184,729,819
Ensembl chr 2:184,724,554...184,729,819
JBrowse link
G Lrrc24 leucine rich repeat containing 24 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 7:110,317,935...110,325,201
Ensembl chr 7:110,317,020...110,325,074
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:21940441)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:21940441 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:104,058,558...104,092,831
Ensembl chr 1:104,072,128...104,093,298
JBrowse link
G Lrrn1 leucine rich repeat neuronal 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 4:142,032,805...142,072,320
Ensembl chr 4:142,032,041...142,074,760
JBrowse link
G Lrrn3 leucine rich repeat neuronal 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 6:64,216,164...64,247,293
Ensembl chr 6:64,215,878...64,247,614
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr 4:111,246,213...111,295,638
Ensembl chr 4:111,235,054...111,276,818
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr18:27,091,919...27,096,967
Ensembl chr18:27,091,919...27,096,967
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 acts_upstream_of_or_within
involved_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:24613359)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:24613359 GO_REF:0000033 GO_REF:0000107 NCBI chr20:24,514,304...24,688,322
Ensembl chr20:24,514,284...24,689,002
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:24613359)
GO_Central
RGD
PMID:24613359 GO_REF:0000033 NCBI chr 4:114,103,783...114,894,696
Ensembl chr 4:114,103,870...114,109,726
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr16:4,216,947...4,224,447 JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 acts_upstream_of_or_within
involved_in
IEA
ISO
GO_REF:0000107
(PMID:24613359)
GO_REF:0000117
Ensembl
RGD
UniProt
PMID:24613359 GO_REF:0000107 GO_REF:0000117 NCBI chr 4:154,158,165...154,180,389
Ensembl chr 4:154,158,168...154,167,641
JBrowse link
G Nlgn1 neuroligin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IEA
PMID:17582332
(PMID:21356198)
GO_REF:0000117
(PMID:24613359)
PMID:15797875
RGD
UniProt
PMID:21356198 PMID:24613359 PMID:17582332 PMID:15797875 GO_REF:0000117, RGD:8553502, RGD:8554205 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
IEA
PMID:15797875
GO_REF:0000117
UniProt PMID:15797875 GO_REF:0000117, RGD:8554205 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
IEA
PMID:15797875
(PMID:21642956)
GO_REF:0000117
RGD
UniProt
PMID:21642956 PMID:15797875 GO_REF:0000117, RGD:8554205 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
TAS
GO_REF:0000024
MGI:88281|MGI:88282 (PMID:21356198)
GO_REF:0000107
PMID:15797875
BHF-UCL
RGD
Ensembl
PMID:21356198 PMID:15797875 GO_REF:0000024 GO_REF:0000107, RGD:8554205 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:175,534,844...175,551,787
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,564,570...5,874,628
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Opcml opioid binding protein/cell adhesion molecule-like IDA RGD PMID:19711485 RGD:596948412 NCBI chr 8:34,451,629...35,562,897
Ensembl chr 8:34,451,500...35,558,966
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:16488155 RGD:2304173 NCBI chr 3:138,235,754...138,236,594
Ensembl chr 3:138,235,754...138,236,594
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:16488155 RGD:2304173 NCBI chr 4:147,154,374...147,171,723
Ensembl chr 4:147,154,374...147,170,750
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IDA PMID:21414895 CACAO PMID:21414895 RGD:15023480 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347
JBrowse link
G Prkca protein kinase C, alpha IMP RGD PMID:18073185 RGD:2293299 NCBI chr10:93,388,991...93,787,617
Ensembl chr10:93,388,991...93,787,572
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:25908590), (PMID:25989451) RGD PMID:25908590 PMID:25989451 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:90,361,234...90,377,775
Ensembl chr 3:90,361,839...90,377,974
JBrowse link
G Slit2 slit guidance ligand 2 IMP RGD PMID:26738857 RGD:243048441 NCBI chr14:66,829,661...67,168,517
Ensembl chr14:66,829,661...67,167,146
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_REF:0000107
GO_Central
RGD
UniProt
Ensembl
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:25989451)
(PMID:24613359)
GO_REF:0000117
GO_REF:0000107
GO_Central
RGD
UniProt
Ensembl
PMID:24613359 PMID:25989451 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:150,287,418...150,299,832
Ensembl chr  X:150,287,303...150,314,997
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_Central
RGD
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
G Slitrk4 SLIT and NTRK-like family, member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_Central
RGD
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000117 NCBI chr  X:147,728,163...147,755,086
Ensembl chr  X:147,727,983...147,755,557
JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000117
GO_Central
RGD
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000117 NCBI chr15:95,261,397...95,270,465
Ensembl chr15:95,261,005...95,276,090
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
(PMID:24613359)
GO_REF:0000107
GO_REF:0000117
GO_Central
RGD
Ensembl
UniProt
PMID:24613359 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr15:93,977,812...93,984,431
Ensembl chr15:93,969,038...93,984,526
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO
IEA
IBA
IDA
(PMID:24179158)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:24179158 PMID:24179158 GO_REF:0000033 GO_REF:0000107, RGD:8553698 NCBI chr  X:101,399,748...101,425,486
Ensembl chr  X:101,399,853...101,425,484
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IMP RGD PMID:16887122 RGD:27372880 NCBI chr 1:137,172,354...137,247,796
Ensembl chr 1:137,172,354...137,247,792
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 IMP RGD PMID:16418534 RGD:10043163 NCBI chr 5:7,623,528...7,868,206
Ensembl chr 5:7,624,019...7,868,204
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in ISO
IEA
IBA
IMP
(PMID:20152115)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:20152115 PMID:20152115 GO_REF:0000033 GO_REF:0000107, RGD:8554654 NCBI chr 3:158,491,474...158,695,174
Ensembl chr 3:158,491,996...158,658,652
JBrowse link
G Thbs2 thrombospondin 2 IMP RGD PMID:15707899 RGD:1580068 NCBI chr 1:64,343,523...64,372,918
Ensembl chr 1:64,343,523...64,372,918
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO (PMID:24613359) RGD PMID:24613359 NCBI chr 8:95,673,993...95,677,364
Ensembl chr 8:95,629,267...95,678,394
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:98,808,681...98,842,583
Ensembl chr11:98,807,538...98,843,211
JBrowse link
G Wnt7a Wnt family member 7A involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:18986540)
(PMID:9405095)
GO_REF:0000107
RGD
Ensembl
PMID:9405095 PMID:18986540 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
positive regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISS
ISO
GO_REF:0000024
(PMID:10402191)
UniProt
RGD
PMID:10402191 GO_REF:0000024 NCBI chr 5:172,031,528...172,064,429
Ensembl chr 5:172,031,528...172,064,539
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IMP PMID:25764078 CACAO PMID:25764078 RGD:15023478 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP RGD PMID:14749715 RGD:2317108 NCBI chr 5:77,853,560...77,967,653
Ensembl chr 5:77,853,736...77,964,338
JBrowse link
postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1ql2 complement C1q like 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27133466)
Ensembl
RGD
PMID:27133466 GO_REF:0000107 NCBI chr13:34,023,902...34,025,437
Ensembl chr13:34,023,177...34,026,020
JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) RGD PMID:27133466 NCBI chr17:81,028,418...81,038,244
Ensembl chr17:81,028,418...81,038,244
JBrowse link
G Csmd2 CUB and Sushi multiple domains 2 involved_in ISO (PMID:31068362) RGD PMID:31068362 NCBI chr 5:145,626,823...146,196,815
Ensembl chr 5:145,626,845...146,196,812
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in EXP
IMP
IDA
PMID:29024665 SynGO PMID:29024665 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141, RGD:13702141 NCBI chr10:105,309,578...105,318,829
Ensembl chr10:105,309,578...105,318,863
JBrowse link
G Nrxn3 neurexin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:27133466)
Ensembl
RGD
PMID:27133466 GO_REF:0000107 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:113,443,524...115,002,540
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
EXP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) RGD PMID:18082964 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) RGD PMID:21664258 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:13,628,399...14,055,162
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 acts_upstream_of_or_within ISO MGI:6119690 (PMID:29107521) RGD PMID:29107521 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb2 Eph receptor B2 involved_in IMP
IEP
IDA
PMID:11136979 SynGO PMID:11136979 PMID:11136979 PMID:11136979 RGD:13702452, RGD:13702452, RGD:13702452 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22038977)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22038977 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12796785), (PMID:15620359)
BHF-UCL
RGD
PMID:12796785 PMID:15620359 GO_REF:0000024 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:21642956)
GO_REF:0000033
BHF-UCL
RGD
GO_Central
PMID:21642956 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21424692)
(PMID:15620359)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:15620359 PMID:21424692 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein involved_in IEA
ISO
GO_REF:0000107
(PMID:21041412)
Ensembl
RGD
PMID:21041412 GO_REF:0000107 NCBI chr10:61,028,736...61,054,971
Ensembl chr10:61,028,757...61,082,988
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:21041412) RGD PMID:21041412 NCBI chr11:97,033,033...97,067,457
Ensembl chr11:97,024,782...97,067,457
JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (PMID:21041412) RGD PMID:21041412 NCBI chr 5:118,714,863...118,898,362
Ensembl chr 5:118,714,863...118,898,335
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:15620359) RGD PMID:15620359 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:15620359), (PMID:19755106)
Ensembl
RGD
PMID:15620359 PMID:19755106 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA PMID:17897391 SynGO PMID:17897391 RGD:9831151 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Ntng2 netrin G2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16980967)
Ensembl
RGD
PMID:16980967 GO_REF:0000107 NCBI chr 3:32,889,856...32,949,032
Ensembl chr 3:32,890,575...32,943,821
JBrowse link
presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:12202822) RGD PMID:12202822 NCBI chr 8:56,744,374...57,075,264
Ensembl chr 8:56,744,372...57,080,192
JBrowse link
G Cntn5 contactin 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:24411736)
Ensembl
RGD
PMID:24411736 GO_REF:0000107 NCBI chr 8:15,017,424...16,249,418
Ensembl chr 8:15,018,927...15,969,060
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:16818724)
Ensembl
RGD
PMID:16818724 GO_REF:0000107 NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:171,739,133...171,750,966
JBrowse link
G Efnb1 ephrin B1 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr  X:68,297,529...68,310,335
Ensembl chr  X:68,297,492...68,349,546
JBrowse link
G Efnb2 ephrin B2 involved_in IMP
IDA
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:87,485,198...87,529,208
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in IDA
EXP
IMP
PMID:20530549 SynGO PMID:20530549 PMID:20530549 PMID:20530549 RGD:13702329, RGD:13702329, RGD:13702329 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 acts_upstream_of_or_within ISO (PMID:23358245) RGD PMID:23358245 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:23358245)
Ensembl
RGD
PMID:23358245 GO_REF:0000107 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nrxn1 neurexin 1 involved_in IMP
ISO
IEA
IDA
EXP
PMID:12796785
(PMID:21410790)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:21410790 PMID:12796785 PMID:12796785 PMID:12796785 GO_REF:0000107 GO_REF:0000117, RGD:13702298, RGD:13702298, RGD:13702298 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Nrxn3 neurexin 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:113,443,524...115,002,540
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO
IEA
(PMID:21926414)
GO_REF:0000117
RGD
UniProt
PMID:21926414 GO_REF:0000117 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
EXP
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,332,559...1,394,093
JBrowse link
G Sdcbp syndecan binding protein involved_in IDA
IMP
PMID:19915143 SynGO PMID:19915143 PMID:19915143 RGD:13702172, RGD:13702172 NCBI chr 5:24,245,279...24,314,712
Ensembl chr 5:24,245,033...24,326,197
JBrowse link
presynaptic active zone assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IDA
IEA
IBA
PMID:22875941
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
PMID:22875941 GO_REF:0000033 GO_REF:0000117, RGD:14390063 NCBI chr 8:117,663,447...117,754,412
Ensembl chr 8:117,670,334...117,754,412
JBrowse link
G Pcdh17 protocadherin 17 acts_upstream_of_or_within
involved_in
IEA
ISO
IBA
GO_REF:0000107
(PMID:23684785)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:23684785 GO_REF:0000033 GO_REF:0000107 NCBI chr15:66,631,549...66,725,007
Ensembl chr15:66,633,142...66,722,105
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in IDA
IEA
IBA
PMID:22875941
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
PMID:22875941 GO_REF:0000033 GO_REF:0000117, RGD:14390063 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:20,646,604...21,005,111
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:55,328,964...56,826,613
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22038977)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22038977 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IEA
PMID:19730411
(PMID:10892652), (PMID:12796785), (PMID:15620359)
GO_REF:0000117
PMID:15797875
RGD
UniProt
PMID:10892652 PMID:12796785 PMID:15620359 PMID:19730411 PMID:15797875 GO_REF:0000117, RGD:8554379, RGD:8554205 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
ISO
IEA
PMID:15797875
(PMID:15620359), (PMID:19016888)
GO_REF:0000117
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15620359 PMID:19016888 PMID:15797875 GO_REF:0000107 GO_REF:0000117, RGD:8554205 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
IEA
IBA
PMID:15797875
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
PMID:15797875 GO_REF:0000033 GO_REF:0000117, RGD:8554205 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:18082964) RGD PMID:18082964 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21940441) RGD PMID:21940441 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:86,406,229...86,429,819
Ensembl chr13:86,406,218...86,429,816
JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO MGI:3583769 (PMID:23610556) RGD PMID:23610556 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612
JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:36,302,352...36,319,689
JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:22046243)
Ensembl
RGD
PMID:22046243 GO_REF:0000107 NCBI chr 9:83,309,895...83,312,397
Ensembl chr 9:83,311,246...83,315,608
JBrowse link
G Myo1c myosin 1C involved_in ISO
IEA
(PMID:21402783)
GO_REF:0000107
RGD
Ensembl
PMID:21402783 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,996,638...61,019,022
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:20504882) RGD PMID:20504882 NCBI chr18:60,663,918...60,996,824
Ensembl chr18:60,663,970...60,996,824
JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:98,165,974...98,231,916
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA
(PMID:15905176)
GO_REF:0000107
RGD
Ensembl
PMID:15905176 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189
Ensembl chr19:41,059,843...41,086,494
JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS
IEA
(PMID:19114660)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19114660 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:98,027,830...98,226,486
Ensembl chr 6:98,027,646...98,226,477
JBrowse link
G Rnf114 ring finger protein 114 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:176,641,456...176,653,262
Ensembl chr 3:176,641,499...176,671,960
JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:176,667,476...176,671,965 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:99,686,934...99,690,349
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:128,260,330...128,505,158
JBrowse link
regulation of cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rap1a RAP1A, member of RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21840392)
UniProt
Ensembl
RGD
PMID:21840392 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:195,896,967...195,974,851
Ensembl chr 2:195,896,971...195,974,808
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 7:55,308,922...55,342,217
Ensembl chr 7:55,308,922...55,342,217
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:21840392) RGD PMID:21840392 NCBI chr 3:33,296,211...33,414,119
Ensembl chr 3:33,296,230...33,414,119
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO
ISS
(PMID:21840392)
GO_REF:0000024
RGD
UniProt
PMID:21840392 GO_REF:0000024 NCBI chr 2:166,505,868...166,728,139
Ensembl chr 2:166,505,868...166,726,698
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,387,360...1,509,147
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:45,407,965...45,502,771
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:128,260,330...128,505,158
JBrowse link
regulation of excitatory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:32434929)
UniProt
RGD
PMID:32434929 GO_REF:0000024 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:106,118,106...106,120,951
Ensembl chr10:106,118,108...106,120,951
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO
IEA
(PMID:27693509)
GO_REF:0000107
RGD
Ensembl
PMID:27693509 GO_REF:0000107 NCBI chr12:6,440,959...6,464,582
Ensembl chr12:6,441,152...6,464,582
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:32,046,362...32,267,954
Ensembl chr13:32,046,444...32,267,924
JBrowse link
G Coro1c coronin 1C involved_in ISO
IEA
UniProtKB:Q05397 (PMID:19913511)
GO_REF:0000107
RGD
Ensembl
PMID:19913511 GO_REF:0000107 NCBI chr12:48,373,573...48,445,718
Ensembl chr12:48,373,597...48,445,716
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO
IEA
(PMID:23454120)
GO_REF:0000107
RGD
Ensembl
PMID:23454120 GO_REF:0000107 NCBI chr 7:9,174,903...9,183,272
Ensembl chr 7:9,174,904...9,183,272
JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO
IEA
(PMID:28759036)
GO_REF:0000117
RGD
UniProt
PMID:28759036 GO_REF:0000117 NCBI chr10:87,420,213...87,434,202
Ensembl chr10:87,419,494...87,434,063
JBrowse link
G Efna5 ephrin A5 involved_in ISS
ISO
GO_REF:0000024
(PMID:11870224)
UniProt
RGD
PMID:11870224 GO_REF:0000024 NCBI chr 9:109,763,786...110,042,396
Ensembl chr 9:109,767,252...110,042,348
JBrowse link
G Epha3 Eph receptor A3 involved_in ISS
ISO
GO_REF:0000024
(PMID:11870224)
UniProt
RGD
PMID:11870224 GO_REF:0000024 NCBI chr11:14,585,041...14,920,721
Ensembl chr11:14,586,727...14,920,425
JBrowse link
G Gpm6b glycoprotein m6b involved_in ISO
IEA
ISS
(PMID:21638316)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21638316 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:31,689,485...31,836,199
Ensembl chr  X:31,690,359...31,733,272
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:17077323) RGD PMID:17077323 NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:120,966,623...120,979,089
JBrowse link
G Ldb1 LIM domain binding 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19675209)
Ensembl
RGD
PMID:19675209 GO_REF:0000107 NCBI chr 1:254,813,161...254,838,931
Ensembl chr 1:254,826,160...254,838,998
JBrowse link
G Limch1 LIM and calponin homology domains 1 involved_in ISO
IBA
(PMID:28228547)
GO_REF:0000033
RGD
GO_Central
PMID:28228547 GO_REF:0000033 NCBI chr14:41,466,433...41,779,477
Ensembl chr14:41,466,433...41,778,837
JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 involved_in ISS
ISO
IEA
IBA
GO_REF:0000024
(PMID:18854161)
GO_REF:0000117
GO_REF:0000033
(PMID:27693509)
UniProt
RGD
GO_Central
PMID:18854161 PMID:27693509 GO_REF:0000024 GO_REF:0000033 GO_REF:0000117 NCBI chr 5:140,908,829...141,234,127
Ensembl chr 5:140,908,837...141,233,890
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO
IEA
(PMID:23105102)
GO_REF:0000107
RGD
Ensembl
PMID:23105102 GO_REF:0000107 NCBI chr 8:65,501,068...65,715,768
Ensembl chr 8:65,505,043...65,715,111
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO UniProtKB:Q9ULV4 (PMID:19913511) RGD PMID:19913511 NCBI chr 7:107,015,730...107,220,865
Ensembl chr 7:107,015,733...107,172,091
JBrowse link
G Ptpra protein tyrosine phosphatase, receptor type, A involved_in ISS
ISO
GO_REF:0000024
(PMID:22801373)
UniProt
RGD
PMID:22801373 GO_REF:0000024 NCBI chr 3:138,103,261...138,212,835
Ensembl chr 3:138,098,110...138,213,126
JBrowse link
G Rhod ras homolog family member D involved_in ISO (PMID:23454120) RGD PMID:23454120 NCBI chr 1:211,138,126...211,153,953
Ensembl chr 1:211,138,126...211,152,061
JBrowse link
G Slk STE20-like kinase involved_in ISO
IEA
ISS
(PMID:23128389)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23128389 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:256,415,013...256,470,942
Ensembl chr 1:256,415,013...256,467,829
JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:32,367,434...32,416,565
Ensembl chr 3:32,367,670...32,416,568
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:26923917)
Ensembl
RGD
PMID:26923917 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,315,069...3,405,163
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:5558098 (PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 NCBI chr14:99,847,463...100,178,392
Ensembl chr14:99,847,632...100,200,287
JBrowse link
regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:23603510)
Ensembl
RGD
PMID:23603510 GO_REF:0000107 NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:90,624,012...90,627,908
JBrowse link
regulation of inhibitory synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:29742426)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29742426 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:147,872,877...147,895,770
Ensembl chr 4:147,872,877...147,895,770
JBrowse link
regulation of postsynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:29969655) RGD PMID:29969655 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:58,041,641...58,170,505
JBrowse link
G Arhgap12 Rho GTPase activating protein 12 involved_in IDA
IMP
PMID:26854232 SynGO PMID:26854232 PMID:26854232 RGD:11572714, RGD:11572714 NCBI chr17:56,284,282...56,397,630
Ensembl chr17:56,284,286...56,397,563
JBrowse link
G Arhgap33 Rho GTPase activating protein 33 involved_in IEA
ISO
GO_REF:0000107
(PMID:24003235)
Ensembl
RGD
PMID:24003235 GO_REF:0000107 NCBI chr 1:94,903,566...94,917,074
Ensembl chr 1:94,902,922...94,917,684
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 involved_in IEA
ISO
GO_REF:0000107
(PMID:28185854)
Ensembl
RGD
PMID:28185854 GO_REF:0000107 NCBI chr10:54,149,372...54,162,128
Ensembl chr10:54,149,372...54,162,128
JBrowse link
G Asic1 acid sensing ion channel subunit 1 involved_in ISO (PMID:17060608) RGD PMID:17060608 NCBI chr 7:132,677,158...132,707,379
Ensembl chr 7:132,698,723...132,707,832
JBrowse link
G Asic2 acid sensing ion channel subunit 2 involved_in ISO (PMID:19571134) RGD PMID:19571134 NCBI chr10:66,368,308...67,438,237
Ensembl chr10:66,368,310...66,636,245
JBrowse link
G Carmil3 capping protein regulator and myosin 1 linker 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:30674877)
Ensembl
RGD
PMID:30674877 GO_REF:0000107 NCBI chr15:32,948,228...32,965,829
Ensembl chr15:32,948,856...32,965,811
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A involved_in IEA
ISO
GO_REF:0000107
(PMID:26826102)
Ensembl
RGD
PMID:26826102 GO_REF:0000107 NCBI chr19:40,916,587...40,931,702
Ensembl chr19:40,916,532...40,931,701
JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in IBA
ISO
GO_REF:0000033
(PMID:22153079)
GO_Central
RGD
PMID:22153079 GO_REF:0000033 NCBI chr 1:244,161,690...244,343,765
Ensembl chr 1:244,161,690...244,343,561
JBrowse link
G Crmp1 collapsin response mediator protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18003833)
Ensembl
RGD
PMID:18003833 GO_REF:0000107 NCBI chr14:77,734,675...77,780,916
Ensembl chr14:77,734,675...77,780,916
JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 involved_in ISO (PMID:28692454) RGD PMID:28692454 NCBI chr10:31,122,653...31,242,440
Ensembl chr10:31,122,653...31,242,440
JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in ISO (PMID:23385585) RGD PMID:23385585 NCBI chr 2:141,567,215...141,861,088
Ensembl chr 2:141,571,983...141,861,090
JBrowse link
G Dcx doublecortin involved_in IEA
ISO
GO_REF:0000107
(PMID:29788228)
Ensembl
RGD
PMID:29788228 GO_REF:0000107 NCBI chr  X:112,227,455...112,370,291
Ensembl chr  X:112,227,455...112,304,161
JBrowse link
G Dock1 dedicator of cyto-kinesis 1 involved_in ISO (PMID:21900250) RGD PMID:21900250 NCBI chr 1:198,897,021...199,413,636
Ensembl chr 1:198,897,045...199,413,627
JBrowse link
G Dock10 dedicator of cytokinesis 10 involved_in ISO (PMID:25851601) RGD PMID:25851601 NCBI chr 9:89,291,936...89,549,871
Ensembl chr 9:89,291,800...89,549,973
JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in IMP
IDA
PMID:23536706 SynGO PMID:23536706 PMID:23536706 RGD:405650262, RGD:405650262 NCBI chr 6:63,240,050...63,629,772
Ensembl chr 6:63,240,136...63,629,772
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 involved_in IDA
IMP
PMID:29425794 SynGO PMID:29425794 PMID:29425794 RGD:405650303, RGD:405650303 NCBI chr15:45,181,041...45,287,065
Ensembl chr15:45,181,041...45,287,065
JBrowse link
G Elmo1 engulfment and cell motility 1 involved_in IMP
IDA
PMID:21900250 SynGO PMID:21900250 PMID:21900250 RGD:405650271, RGD:405650271 NCBI chr17:48,982,188...49,518,525
Ensembl chr17:48,982,188...49,518,159
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO (PMID:21969592) RGD PMID:21969592 NCBI chr15:19,038,726...19,060,644
Ensembl chr15:19,038,616...19,065,219
JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in IDA
IMP
PMID:29983322 SynGO PMID:29983322 PMID:29983322 RGD:405650287, RGD:405650287 NCBI chr 6:120,507,998...120,603,133
Ensembl chr 6:120,507,689...120,609,004
JBrowse link
G Gna13 G protein subunit alpha 13 involved_in ISO (PMID:34665640) RGD PMID:34665640 NCBI chr10:94,837,271...94,870,290
Ensembl chr10:94,836,444...94,874,968
JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:32060357)
Ensembl
RGD
PMID:32060357 GO_REF:0000107 NCBI chr18:58,036,277...58,221,327
Ensembl chr18:58,036,277...58,219,622
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:25407677)
Ensembl
RGD
PMID:25407677 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:26490870)
Ensembl
RGD
PMID:26490870 GO_REF:0000107 NCBI chr16:25,309,502...25,364,942
Ensembl chr16:25,309,507...25,364,940
JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 involved_in IDA
IMP
PMID:27252646 SynGO PMID:27252646 PMID:27252646 RGD:13210540, RGD:13210540 NCBI chr 3:138,303,378...138,313,645
Ensembl chr 3:138,303,378...138,313,611
JBrowse link
G Map1b microtubule-associated protein 1B involved_in IEA
ISO
GO_REF:0000107
(PMID:21984824)
Ensembl
RGD
PMID:21984824 GO_REF:0000107 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:32,551,423...32,657,094
JBrowse link
G Mark1 microtubule affinity regulating kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:27829159)
Ensembl
RGD
PMID:27829159 GO_REF:0000107 NCBI chr13:98,981,727...99,086,998
Ensembl chr13:98,983,020...99,086,701
JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25581363)
Ensembl
RGD
PMID:25581363 GO_REF:0000107 NCBI chr19:452,462...478,591
Ensembl chr19:452,432...478,831
JBrowse link
G Nckipsd NCK interacting protein with SH3 domain involved_in IDA
IMP
PMID:23342115 SynGO PMID:23342115 PMID:23342115 RGD:405650384, RGD:405650384 NCBI chr 8:118,390,121...118,401,121
Ensembl chr 8:118,390,159...118,401,118
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:28872640)
Ensembl
RGD
PMID:28872640 GO_REF:0000107 NCBI chr11:67,825,296...67,931,999
Ensembl chr11:67,827,137...67,871,383
JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in IEA
ISO
GO_REF:0000107
(PMID:25581363)
Ensembl
RGD
PMID:25581363 GO_REF:0000107 NCBI chr15:33,123,505...33,135,522
Ensembl chr15:33,123,505...33,135,522
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:256,008,012...256,094,219
Ensembl chr 1:256,008,160...256,094,224
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:36608123) RGD PMID:36608123 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IDA
IEA
IMP
PMID:16394100
GO_REF:0000117
UniProt PMID:16394100 PMID:16394100 GO_REF:0000117, RGD:2302413, RGD:2302413 NCBI chr 6:109,162,499...109,284,527
Ensembl chr 6:109,162,499...109,284,463
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in IDA
IEA
IMP
PMID:16394100
GO_REF:0000117
UniProt PMID:16394100 PMID:16394100 GO_REF:0000117, RGD:2302413, RGD:2302413 NCBI chr 1:91,677,437...91,701,415
Ensembl chr 1:91,677,242...91,701,424
JBrowse link
G Palm paralemmin involved_in IMP
IDA
PMID:18287537 SynGO PMID:18287537 PMID:18287537 RGD:8553517, RGD:8553517 NCBI chr 7:10,537,252...10,563,346
Ensembl chr 7:10,537,277...10,563,007
JBrowse link
G Pcdh7 protocadherin 7 involved_in IDA
IMP
PMID:32616769 SynGO PMID:32616769 PMID:32616769 RGD:405650241, RGD:405650241 NCBI chr14:56,684,817...57,114,976
Ensembl chr14:56,687,725...57,112,665
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA
IMP
PMID:19900557 SynGO PMID:19900557 PMID:19900557 RGD:8554803, RGD:8554803 NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:233,628,503...233,793,528
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B involved_in IEA
ISO
GO_REF:0000107
(PMID:10922077)
Ensembl
RGD
PMID:10922077 GO_REF:0000107 NCBI chr10:80,434,888...80,450,919
Ensembl chr10:80,434,900...80,450,919
JBrowse link
G Psd pleckstrin and Sec7 domain containing involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 1:255,114,703...255,130,151
Ensembl chr 1:255,114,703...255,129,553
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 involved_in IMP
IDA
PMID:22844492 SynGO PMID:22844492 PMID:22844492 RGD:405650356, RGD:405650356 NCBI chr 3:177,056,588...177,106,424
Ensembl chr 3:177,057,659...177,106,416
JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in IMP
IDA
PMID:20133610 SynGO PMID:20133610 PMID:20133610 RGD:405650299, RGD:405650299 NCBI chr 6:37,182,130...37,262,223
Ensembl chr 6:37,182,013...37,262,223
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:31369617) RGD PMID:31369617 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:16,128,649...16,172,109
JBrowse link
G Rac3 Rac family small GTPase 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:31369617)
Ensembl
RGD
PMID:31369617 GO_REF:0000107 NCBI chr10:106,501,133...106,503,569
Ensembl chr10:106,501,135...106,503,569
JBrowse link
G Rhog ras homolog family member G involved_in ISO (PMID:21900250) RGD PMID:21900250 NCBI chr 1:166,030,685...166,046,254
Ensembl chr 1:166,017,427...166,044,787
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:26748478)
Ensembl
RGD
PMID:26748478 GO_REF:0000107 NCBI chr14:107,651,001...107,698,610
Ensembl chr14:107,650,732...107,698,611
JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26748478) RGD PMID:26748478 NCBI chr11:96,348,613...96,373,554
Ensembl chr11:96,348,502...96,373,554
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 involved_in ISO (PMID:26748478) RGD PMID:26748478 NCBI chr 8:27,779,452...27,790,344
Ensembl chr 8:27,774,566...27,790,577
JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in IDA
IEP
PMID:22201125 SynGO PMID:22201125 PMID:22201125 RGD:405650281, RGD:405650281 NCBI chr15:22,616,200...22,831,872
Ensembl chr15:22,614,287...22,831,872
JBrowse link
G Sema4c semaphorin 4C involved_in IEA
ISO
GO_REF:0000107
(PMID:31444474)
Ensembl
RGD
PMID:31444474 GO_REF:0000107 NCBI chr 9:46,287,540...46,298,041
Ensembl chr 9:46,287,542...46,297,998
JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in IDA
IMP
PMID:29425794 SynGO PMID:29425794 PMID:29425794 RGD:405650303, RGD:405650303 NCBI chr 7:131,042,237...131,105,826
Ensembl chr 7:131,044,818...131,100,851
JBrowse link
G Sigmar1 sigma non-opioid intracellular receptor 1 involved_in IDA
IMP
PMID:20018732 SynGO PMID:20018732 PMID:20018732 RGD:405650297, RGD:405650297 NCBI chr 5:61,700,021...61,702,799
Ensembl chr 5:61,700,021...61,702,855
JBrowse link
G Slc12a5 solute carrier family 12 member 5 involved_in IMP
IDA
PMID:18093524 SynGO PMID:18093524 PMID:18093524 RGD:405650301, RGD:405650301 NCBI chr 3:174,115,833...174,155,112
Ensembl chr 3:174,115,833...174,155,112
JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in ISO (PMID:21325512) RGD PMID:21325512 NCBI chr 4:147,391,082...147,626,407
Ensembl chr 4:147,395,880...147,625,713
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IDA
IMP
EXP
PMID:20152115 SynGO PMID:20152115 PMID:20152115 PMID:20152115 RGD:8554654, RGD:8554654, RGD:8554654 NCBI chr 3:158,491,474...158,695,174
Ensembl chr 3:158,491,996...158,658,652
JBrowse link
G Trim47 tripartite motif-containing 47 involved_in IDA
IMP
PMID:36211980 SynGO PMID:36211980 PMID:36211980 RGD:405650257, RGD:405650257 NCBI chr10:101,836,465...101,840,936
Ensembl chr10:101,836,465...101,840,936
JBrowse link
G Ube2m ubiquitin-conjugating enzyme E2M involved_in ISO (PMID:25581363) RGD PMID:25581363 NCBI chr 1:82,734,761...82,738,298
Ensembl chr 1:82,732,231...82,738,613
JBrowse link
G Ube3b ubiquitin protein ligase E3B involved_in IEA
ISO
GO_REF:0000107
(PMID:32249816)
Ensembl
RGD
PMID:32249816 GO_REF:0000107 NCBI chr12:47,844,368...47,890,702
Ensembl chr12:47,844,369...47,890,702
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:31813652) RGD PMID:31813652 NCBI chr  X:12,261,633...12,399,780
Ensembl chr  X:12,261,633...12,369,491
JBrowse link
G Vps35 VPS35 retromer complex component involved_in IEA
ISO
GO_REF:0000107
(PMID:26521016)
Ensembl
RGD
PMID:26521016 GO_REF:0000107 NCBI chr19:37,938,989...37,974,887
Ensembl chr19:37,938,720...37,974,886
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:18836441) RGD PMID:18836441 NCBI chr11:96,259,383...96,273,588
Ensembl chr11:96,259,449...96,284,003
JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:57,381,282...57,597,989
Ensembl chr11:57,381,422...57,598,120
JBrowse link
G Caskin1 CASK interacting protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:31727973)
Ensembl
RGD
PMID:31727973 GO_REF:0000107 NCBI chr10:14,016,780...14,037,927
Ensembl chr10:14,018,012...14,037,924
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA
ISO
GO_REF:0000107
(PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP
IDA
PMID:10570482 SynGO PMID:10570482 PMID:10570482 RGD:8554363, RGD:8554363 NCBI chr 6:13,334,978...13,342,934
Ensembl chr 6:13,334,954...13,345,044
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:32324534)
Ensembl
RGD
PMID:32324534 GO_REF:0000107 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:73,194,631...73,249,855
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20395510)
Ensembl
RGD
PMID:20395510 GO_REF:0000107 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) RGD PMID:22357843 NCBI chr11:87,567,813...87,704,346
Ensembl chr11:87,575,116...87,704,342
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IMP
IDA
EXP
PMID:29317530 SynGO PMID:29317530 PMID:29317530 PMID:29317530 RGD:405650325, RGD:405650325, RGD:405650325 NCBI chr 1:3,980,801...4,014,029
Ensembl chr 1:3,980,544...4,014,029
JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA
PMID:16630835 SynGO PMID:16630835 PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:92,866,864...92,888,984
Ensembl chr 1:92,874,827...92,888,982
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:20410109)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:211,317,980...211,321,272
Ensembl chr 1:211,317,980...211,321,272
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:104,058,558...104,092,831
Ensembl chr 1:104,072,128...104,093,298
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:111,246,213...111,295,638
Ensembl chr 4:111,235,054...111,276,818
JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:27,091,919...27,096,967
Ensembl chr18:27,091,919...27,096,967
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:32324534) RGD PMID:32324534 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21410790)
Ensembl
RGD
PMID:21410790 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:34613779)
Ensembl
RGD
PMID:34613779 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:126,518,587...126,614,581
JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) RGD PMID:23711981 PMID:34613779 NCBI chr 4:126,426,767...126,771,986
Ensembl chr 4:126,426,771...126,772,008
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:28555636) RGD PMID:28555636 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:44,531,249...44,656,806
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in IEA
ISO
GO_REF:0000117
(PMID:22357843)
UniProt
RGD
PMID:22357843 GO_REF:0000117 NCBI chr 5:95,093,221...97,415,498
Ensembl chr 5:95,095,858...96,178,903
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IEA
IMP
EXP
PMID:21262467
(PMID:21262467)
GO_REF:0000117
RGD
UniProt
PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 GO_REF:0000117, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,332,558...1,394,161
Ensembl chr 9:1,332,559...1,394,093
JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA
PMID:11502259 SynGO PMID:11502259 PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:107,570,569...107,849,613
Ensembl chr 6:107,737,392...107,848,160
JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA
EXP
IMP
PMID:20220006 SynGO PMID:20220006 PMID:20220006 PMID:20220006 RGD:8693579, RGD:8693579, RGD:8693579 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:35,377,391...35,480,846
JBrowse link
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in IBA
ISO
GO_REF:0000033
(PMID:17690689)
GO_Central
RGD
PMID:17690689 GO_REF:0000033 NCBI chr  X:63,929,168...64,087,267
Ensembl chr  X:63,929,176...64,087,104
JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 involved_in IDA
IEA
IMP
PMID:23839781
GO_REF:0000117
UniProt PMID:23839781 PMID:23839781 GO_REF:0000117, RGD:405650375, RGD:405650375 NCBI chr 8:88,221,839...88,225,688
Ensembl chr 8:88,221,843...88,225,072
JBrowse link
G Eef1a1l1 eukaryotic translation elongation factor 1 alpha 1 like 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr  X:153,525,380...153,527,134
Ensembl chr  X:153,448,733...153,527,212
JBrowse link
G Eef1a1l2 eukaryotic translation elongation factor 1 alpha 1 like 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:163,598,531...163,601,027
Ensembl chr 3:163,598,840...163,601,002
JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 involved_in IDA
IEA
IMP
PMID:23839781
GO_REF:0000117
UniProt PMID:23839781 PMID:23839781 GO_REF:0000117, RGD:405650375, RGD:405650375 NCBI chr 3:188,643,455...188,652,633
Ensembl chr 3:188,643,458...188,677,712
JBrowse link
G Gap43 growth associated protein 43 involved_in IDA
IMP
PMID:25755278 SynGO PMID:25755278 PMID:25755278 RGD:13702431, RGD:13702431 NCBI chr11:71,882,131...71,975,799
Ensembl chr11:71,882,131...71,975,797
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) RGD PMID:27986928 NCBI chr 7:113,217,046...113,235,122
Ensembl chr 7:113,217,050...113,235,156
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:15620359)
Ensembl
RGD
PMID:15620359 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:28576936)
Ensembl
RGD
PMID:28576936 GO_REF:0000107 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:211,432,373...211,473,306
JBrowse link
G Wnt5a Wnt family member 5A involved_in IDA
IEP
IMP
PMID:19332546 SynGO PMID:19332546 PMID:19332546 PMID:19332546 RGD:155230776, RGD:155230776, RGD:155230776 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
JBrowse link
regulation of presynapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO
IEA
(PMID:19726636)
GO_REF:0000107
RGD
Ensembl
PMID:19726636 GO_REF:0000107 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:37,506,408...37,722,971
JBrowse link
G Arf6 ARF GTPase 6 involved_in IMP
IDA
PMID:16672654 SynGO PMID:16672654 PMID:16672654 RGD:8554141, RGD:8554141 NCBI chr 6:93,589,777...93,590,925
Ensembl chr 6:93,569,234...93,610,536
JBrowse link
G Cbln1 cerebellin 1 precursor involved_in IEA
ISO
GO_REF:0000107
(PMID:20395510), (PMID:21410790)
Ensembl
RGD
PMID:20395510 PMID:21410790 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Clstn3 calsyntenin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:24613359)
Ensembl
RGD
PMID:24613359 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO UniProtKB:Q21053 (PMID:25533483) RGD PMID:25533483 NCBI chr11:93,726,322...93,746,387
Ensembl chr11:93,726,322...93,746,367
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303 PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:104,531,196...104,770,148
Ensembl chr15:104,531,813...104,770,147
JBrowse link
G Fzd1 frizzled class receptor 1 involved_in ISO (PMID:19883499) RGD PMID:19883499 NCBI chr 4:30,265,074...30,269,472
Ensembl chr 4:30,247,228...30,833,176
JBrowse link
G Gpc4 glypican 4 involved_in IDA
IBA
IMP
PMID:23911103
GO_REF:0000033
GO_Central PMID:23911103 PMID:23911103 GO_REF:0000033, RGD:13702303, RGD:13702303 NCBI chr  X:136,565,536...136,676,142
Ensembl chr  X:136,565,591...136,676,057
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IDA
IMP
PMID:21410790
PMID:20395510
SynGO PMID:21410790 PMID:21410790 PMID:20395510 PMID:20395510 RGD:13702257, RGD:13702257, RGD:13702347, RGD:13702347 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Igsf11 immunoglobulin superfamily, member 11 involved_in ISO (PMID:34261648) RGD PMID:34261648 NCBI chr11:75,238,706...75,389,748
Ensembl chr11:75,236,545...75,390,425
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in ISO (PMID:22357843) RGD PMID:22357843 NCBI chr11:87,567,813...87,704,346
Ensembl chr11:87,575,116...87,704,342
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21926414)
Ensembl
RGD
PMID:21926414 GO_REF:0000107 NCBI chr  X:55,322,779...56,827,486
Ensembl chr  X:55,328,964...56,826,613
JBrowse link
G Il1rapl2 interleukin 1 receptor accessory protein-like 2 involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr  X:105,547,403...107,080,369
Ensembl chr  X:105,754,490...107,065,223
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IMP
IDA
PMID:27480238 SynGO PMID:27480238 PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:94,744,315...94,751,001
Ensembl chr 1:94,744,321...94,751,178
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:20410109)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:211,317,980...211,321,272
Ensembl chr 1:211,317,980...211,321,272
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:20410109)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:20410109 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:85,201,465...85,557,872
Ensembl chr 6:85,201,364...85,558,539
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IDA
IBA
IMP
PMID:19252495
GO_REF:0000033
GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:104,058,558...104,092,831
Ensembl chr 1:104,072,128...104,093,298
JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 involved_in IDA
IMP
PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:111,246,213...111,295,638
Ensembl chr 4:111,235,054...111,276,818
JBrowse link
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 involved_in ISO (PMID:26776509) RGD PMID:26776509 NCBI chr20:24,514,304...24,688,322
Ensembl chr20:24,514,284...24,689,002
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO (PMID:28641112) RGD PMID:28641112 NCBI chr20:7,901,856...7,965,834
Ensembl chr20:7,901,856...7,965,834
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) RGD PMID:27608760 NCBI chr 6:90,482,687...91,346,784
Ensembl chr 6:90,498,119...91,344,413
JBrowse link
G Nlgn2 neuroligin 2 involved_in IMP
IDA
PMID:10892652 SynGO PMID:10892652 PMID:10892652 RGD:13702379, RGD:13702379 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:20393464) RGD PMID:20393464 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:65,953,865...66,999,849
JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17360903)
Ensembl
RGD
PMID:17360903 GO_REF:0000107 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Ntng2 netrin G2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16980967)
Ensembl
RGD
PMID:16980967 GO_REF:0000107 NCBI chr 3:32,889,856...32,949,032
Ensembl chr 3:32,890,575...32,943,821
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 involved_in IDA
IMP
PMID:21262467 SynGO PMID:21262467 PMID:21262467 RGD:13702219, RGD:13702219 NCBI chr 1:141,526,192...141,913,575
Ensembl chr 1:141,542,569...141,913,004
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO
IEA
(PMID:23345436)
GO_REF:0000107
RGD
Ensembl
PMID:23345436 GO_REF:0000107 NCBI chr  X:150,287,418...150,299,832
Ensembl chr  X:150,287,303...150,314,997
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436)
(PMID:22286174)
RGD PMID:22286174 PMID:23345436 NCBI chr 2:159,983,650...159,996,194
Ensembl chr 2:159,973,029...159,996,342
JBrowse link
G Snca synuclein alpha involved_in ISO
IEA
UniProtKB:Q21053 (PMID:25533483)
GO_REF:0000107
RGD
Ensembl
PMID:25533483 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:91,026,474...91,126,315
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO
IEA
(PMID:19883499)
GO_REF:0000107
RGD
Ensembl
PMID:19883499 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,533,734...44,577,919
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO
IEA
(PMID:20530549)
GO_REF:0000107
RGD
Ensembl
PMID:20530549 GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
regulation of synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap4 Rho GTPase activating protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:156,787,566...156,802,841
Ensembl chr  X:156,783,776...156,802,450
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in IDA
IMP
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 4:159,584,623...159,617,867
Ensembl chr 4:159,584,654...159,617,866
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (PMID:17301182) RGD PMID:17301182 NCBI chr 2:177,479,091...177,487,306
Ensembl chr 2:177,479,091...177,491,326
JBrowse link
G Clstn3 calsyntenin 3 involved_in ISO (PMID:33101212) RGD PMID:33101212 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Crtac1 cartilage acidic protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:33658590)
Ensembl
RGD
PMID:33658590 GO_REF:0000107 NCBI chr 1:251,040,963...251,182,920
Ensembl chr 1:251,028,143...251,182,689
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:28641114)
Ensembl
RGD
PMID:28641114 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:129,517,545...129,544,662
JBrowse link
G Elavl2 ELAV like RNA binding protein 2 involved_in IMP
IDA
PMID:24991957 SynGO PMID:24991957 PMID:24991957 RGD:9587770, RGD:9587770 NCBI chr 5:111,076,705...111,202,341
Ensembl chr 5:111,076,705...111,224,918
JBrowse link
G Ephb2 Eph receptor B2 involved_in IEA
ISO
GO_REF:0000107
(PMID:17122040)
Ensembl
RGD
PMID:17122040 GO_REF:0000107 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Exoc7 exocyst complex component 7 involved_in IDA
IMP
PMID:30374940 SynGO PMID:30374940 PMID:30374940 RGD:405650391, RGD:405650391 NCBI chr10:102,019,805...102,039,333
Ensembl chr10:102,019,806...102,039,447
JBrowse link
G Ghsr growth hormone secretagogue receptor acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3040440 (PMID:17060947)
Ensembl
RGD
PMID:17060947 GO_REF:0000107 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:112,196,767...112,201,181
JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:93,745,277...95,219,868
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:2655232|MGI:2655237 (PMID:12657691) RGD PMID:12657691 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:28,501,836...28,528,754
JBrowse link
G Icam5 intercellular adhesion molecule 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:23015592)
Ensembl
RGD
PMID:23015592 GO_REF:0000107 NCBI chr 8:27,843,563...27,851,767
Ensembl chr 8:27,844,780...27,857,104
JBrowse link
G L1cam L1 cell adhesion molecule involved_in ISO (PMID:30846310) RGD PMID:30846310 NCBI chr  X:156,748,597...156,775,116
Ensembl chr  X:156,748,597...156,775,077
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 involved_in ISO (PMID:23911103) RGD PMID:23911103 NCBI chr 4:114,103,783...114,894,696
Ensembl chr 4:114,103,870...114,109,726
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:18599438) RGD PMID:18599438 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:15,708,924...15,871,640
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 IMP RGD PMID:11827984 RGD:1599809 NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:52,998,662...53,086,664
JBrowse link
G Negr1 neuronal growth regulator 1 IMP RGD PMID:18602091 RGD:40886282 NCBI chr 2:248,283,164...249,015,538
Ensembl chr 2:248,283,353...249,018,410
JBrowse link
G Nrg2 neuregulin 2 involved_in IDA
IMP
PMID:26674872 SynGO PMID:26674872 PMID:26674872 RGD:11070025, RGD:11070025 NCBI chr18:27,890,578...28,072,538
Ensembl chr18:27,890,578...28,072,538
JBrowse link
G Ntn1 netrin 1 involved_in ISO (PMID:24174661) RGD PMID:24174661 NCBI chr10:53,398,852...53,597,595
Ensembl chr10:53,398,852...53,584,060
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
GO_REF:0000107
(PMID:28143929)
Ensembl
RGD
PMID:28143929 GO_REF:0000107 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:70,811,319...70,856,123
JBrowse link
G Pdlim5 PDZ and LIM domain 5 involved_in IDA PMID:19900557 UniProt PMID:19900557 RGD:8554803 NCBI chr 2:233,625,478...233,793,582
Ensembl chr 2:233,628,503...233,793,528
JBrowse link
G Podxl podocalyxin-like involved_in ISO (PMID:20706633) RGD PMID:20706633 NCBI chr 4:61,102,434...61,149,131
Ensembl chr 4:61,102,419...61,149,789
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A IMP RGD PMID:15473970 RGD:10043779 NCBI chr 4:33,936,949...34,258,927
Ensembl chr 4:33,988,827...34,258,927
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in IEA
ISO
GO_REF:0000107
(PMID:22291024)
Ensembl
RGD
PMID:22291024 GO_REF:0000107 NCBI chr 9:99,001,044...99,014,340
Ensembl chr 9:99,001,045...99,014,032
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family involved_in ISO (PMID:30063210) RGD PMID:30063210 NCBI chr15:104,003,744...104,004,234 JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISO (PMID:26838771) RGD PMID:26838771 NCBI chr11:96,348,613...96,373,554
Ensembl chr11:96,348,502...96,373,554
JBrowse link
G Sdc2 syndecan 2 involved_in IDA
IMP
PMID:17548511 SynGO PMID:17548511 PMID:17548511 RGD:405650239, RGD:405650239 NCBI chr 7:66,012,405...66,125,101
Ensembl chr 7:66,108,853...66,126,294
JBrowse link
G Sema4d semaphorin 4D involved_in IEA
ISO
GO_REF:0000107
(PMID:24036351)
Ensembl
RGD
PMID:24036351 GO_REF:0000107 NCBI chr17:13,582,085...13,688,889
Ensembl chr17:13,582,098...13,688,891
JBrowse link
G Setd5 SET domain containing 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:31515109)
Ensembl
RGD
PMID:31515109 GO_REF:0000107 NCBI chr 4:147,772,955...147,850,669
Ensembl chr 4:147,773,028...147,850,667
JBrowse link
G Snap25 synaptosome associated protein 25 IEP RGD PMID:15478103 RGD:1581079 NCBI chr 3:144,494,579...144,576,449
Ensembl chr 3:144,494,595...144,576,448
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 involved_in ISO (PMID:28641114) RGD PMID:28641114 NCBI chr10:82,999,295...83,066,359
Ensembl chr10:82,991,033...83,067,419
JBrowse link
G Srgap1 SLIT-ROBO Rho GTPase activating protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:59,215,007...59,479,600
Ensembl chr 7:59,215,007...59,656,213
JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:22559944)
GO_REF:0000033
Ensembl
RGD
GO_Central
PMID:22559944 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,298,192...45,519,330
Ensembl chr13:45,298,192...45,519,330
JBrowse link
G Srgap3 SLIT-ROBO Rho GTPase activating protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:147,391,082...147,626,407
Ensembl chr 4:147,395,880...147,625,713
JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in IDA
IMP
PMID:24179158 SynGO PMID:24179158 PMID:24179158 RGD:8553698, RGD:8553698 NCBI chr  X:101,399,748...101,425,486
Ensembl chr  X:101,399,853...101,425,484
JBrowse link
G Vldlr very low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:25644714)
Ensembl
RGD
PMID:25644714 GO_REF:0000107 NCBI chr 1:234,239,769...234,272,150
Ensembl chr 1:234,240,121...234,272,154
JBrowse link
regulation of synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:172,031,528...172,064,429
Ensembl chr 5:172,031,528...172,064,539
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1857733 (PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 NCBI chr16:6,738,251...6,830,492
Ensembl chr16:6,738,251...6,793,501
JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:44,473,568...44,629,074
Ensembl chr 7:44,473,347...44,625,208
JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:104,983,368...104,986,795
Ensembl chr 1:104,982,771...104,986,078
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:116,859,425...116,872,363
Ensembl chr 3:116,860,282...116,872,363
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:1929066 (PMID:8653786)
GO_REF:0000117
UniProt
RGD
PMID:8653786 GO_REF:0000024 GO_REF:0000117 NCBI chr 5:77,853,560...77,967,653
Ensembl chr 5:77,853,736...77,964,338
JBrowse link
G Mycbp2 MYC binding protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:86,352,061...86,590,126
Ensembl chr15:86,352,061...86,590,325
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:106034 (PMID:21884692)
Ensembl
RGD
PMID:21884692 GO_REF:0000107 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:97,482,617...97,487,853
JBrowse link
G Six4 SIX homeobox 4 acts_upstream_of_or_within ISO MGI:102780 (PMID:21884692) RGD PMID:21884692 NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:97,538,202...97,551,872
JBrowse link
slit diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in ISS
ISO
GO_REF:0000024
(PMID:11136707)
UniProt
RGD
PMID:11136707 GO_REF:0000024 NCBI chr 1:94,848,261...94,876,522
Ensembl chr 1:94,848,261...94,876,521
JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in IEA
ISO
GO_REF:0000107
(PMID:11086029)
Ensembl
RGD
PMID:11086029 GO_REF:0000107 NCBI chr 4:171,895,104...172,105,911
Ensembl chr 4:171,895,232...172,105,903
JBrowse link
synapse assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IMP RGD PMID:12799140 RGD:1299197 NCBI chr12:25,042,882...25,050,608
Ensembl chr12:25,043,461...25,050,410
JBrowse link
G Add2 adducin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:21435558)
Ensembl
RGD
PMID:21435558 GO_REF:0000107 NCBI chr 4:120,001,977...120,101,090
Ensembl chr 4:120,002,054...120,101,091
JBrowse link
G Adgrf1 adhesion G protein-coupled receptor F1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4362398 (PMID:27759003)
GO_Central
RGD
PMID:27759003 GO_REF:0000033 NCBI chr 9:25,158,198...25,210,744
Ensembl chr 9:25,147,588...25,208,916
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:38233523)
(PMID:30792275)
(PMID:22405201)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:22405201 PMID:30792275 PMID:38233523 GO_REF:0000024 GO_REF:0000033 NCBI chr14:26,690,891...27,458,132
Ensembl chr14:26,722,194...27,280,418
JBrowse link
G Agrn agrin IMP RGD PMID:12486121 RGD:1578367 NCBI chr 5:172,031,528...172,064,429
Ensembl chr 5:172,031,528...172,064,539
JBrowse link
G Akap5 A-kinase anchoring protein 5 involved_in ISO (PMID:22623657) RGD PMID:22623657 NCBI chr 6:100,787,169...100,796,712
Ensembl chr 6:100,790,148...100,796,620
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in ISO
IEA
(PMID:19036963)
GO_REF:0000107
RGD
Ensembl
PMID:19036963 GO_REF:0000107 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:116,619,633...116,670,657
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856211|MGI:2181384 (PMID:10336181), (PMID:14973254) RGD PMID:10336181 PMID:14973254 NCBI chr19:40,425,560...40,724,810
Ensembl chr19:40,425,560...40,724,599
JBrowse link
G Cadm1 cell adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO (PMID:12202822)
(PMID:21145003)
RGD PMID:12202822 PMID:21145003 NCBI chr 8:56,744,374...57,075,264
Ensembl chr 8:56,744,372...57,080,192
JBrowse link
G Caprin1 cell cycle associated protein 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:4838547 (PMID:20861386)
Ensembl
RGD
PMID:20861386 GO_REF:0000107 NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:110,606,489...110,685,562
JBrowse link
G Cbln1 cerebellin 1 precursor acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:35,781,952...35,785,960
JBrowse link
G Cbln2 cerebellin 2 precursor acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr18:82,215,210...82,222,648
Ensembl chr18:82,215,220...82,222,648
JBrowse link
G Cdh1 cadherin 1 involved_in IMP
IEA
IBA
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
RGD
PMID:12123610 GO_REF:0000033 GO_REF:0000117, RGD:632466 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:51,402,034...51,471,565
JBrowse link
G Cdh13 cadherin 13 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:63,258,251...64,296,122
Ensembl chr19:63,258,122...64,296,119
JBrowse link
G Cdh15 cadherin 15 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:67,812,169...67,834,986
Ensembl chr19:67,812,164...67,834,985
JBrowse link
G Cdh2 cadherin 2 involved_in IMP
IEA
IBA
GO_REF:0000117
GO_REF:0000033
UniProt
GO_Central
RGD
PMID:12125071 GO_REF:0000033 GO_REF:0000117, RGD:632477 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:8,051,097...8,265,288
JBrowse link
G Cdh3 cadherin 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr19:51,303,414...51,353,900
Ensembl chr19:51,300,083...51,354,257
JBrowse link
G Cdh9 cadherin 9 involved_in IMP
ISO
PMID:21867881
(PMID:21867881)
RGD PMID:21867881 PMID:21867881 RGD:13432233 NCBI chr 2:67,954,708...68,094,371
Ensembl chr 2:67,955,166...68,094,365
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:18054859)
Ensembl
RGD
PMID:18054859 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:11,647,141...11,652,777
JBrowse link
G Clstn3 calsyntenin 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:5521290 (PMID:24094106)
Ensembl
RGD
PMID:24094106 GO_REF:0000107 NCBI chr 4:159,017,795...159,051,069
Ensembl chr 4:159,017,795...159,051,069
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:22553019) RGD PMID:22553019 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
JBrowse link
G Dbnl drebrin-like involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:18829961)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18829961 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,880,085...84,895,122
Ensembl chr14:84,880,142...84,897,133
JBrowse link
G Dnm3 dynamin 3 involved_in IDA PMID:15741233 UniProt PMID:15741233 RGD:8554738 NCBI chr13:76,892,381...77,371,346
Ensembl chr13:76,892,171...77,371,350
JBrowse link
G Drd1 dopamine receptor D1 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,545,111...10,567,166
JBrowse link
G Drd2 dopamine receptor D2 involved_in IEP PMID:10051231 BHF-UCL PMID:10051231 RGD:8554073 NCBI chr 8:58,605,403...58,669,339
Ensembl chr 8:58,605,403...58,669,339
JBrowse link
G Dsc1 desmocollin 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:11,774,711...11,831,868
Ensembl chr18:11,775,010...11,803,522
JBrowse link
G Dsc2 desmocollin 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:11,725,466...11,757,591
Ensembl chr18:11,725,466...11,757,466
JBrowse link
G Dsc3 desmocollin 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr18:11,654,833...11,688,871
Ensembl chr18:11,653,832...11,688,871
JBrowse link
G Dscam DS cell adhesion molecule involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:49,391,385...49,976,861
Ensembl chr11:49,347,531...49,976,238
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains involved_in ISO (PMID:18641643) RGD PMID:18641643 NCBI chr 2:58,029,934...58,204,010
Ensembl chr 2:58,029,935...58,203,643
JBrowse link
G Elfn1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 acts_upstream_of_or_within ISO (PMID:36179691) RGD PMID:36179691 NCBI chr12:19,773,911...19,839,375
Ensembl chr12:19,772,908...19,841,961
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:20393464)
Ensembl
RGD
PMID:20393464 GO_REF:0000107 NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:76,973,227...78,045,772
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in NAS PMID:12163476 UniProt PMID:12163476 RGD:1299401 NCBI chr16:2,819,399...3,680,258
Ensembl chr16:2,819,512...3,680,258
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP PMID:23209303 UniProt PMID:23209303 RGD:8554251 NCBI chr15:104,531,196...104,770,148
Ensembl chr15:104,531,813...104,770,147
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:22405201)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22405201 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:148,448,115...148,461,458
Ensembl chr 3:148,439,354...148,461,650
JBrowse link
G Gja10 gap junction protein, alpha 10 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3043946 (PMID:16820008)
Ensembl
RGD
PMID:16820008 GO_REF:0000107 NCBI chr 5:51,787,407...51,799,827
Ensembl chr 5:51,786,277...51,803,613
JBrowse link
G Glra2 glycine receptor, alpha 2 IEP RGD PMID:1645300 RGD:728718 NCBI chr  X:32,651,931...32,873,277
Ensembl chr  X:32,652,187...32,873,277
JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (PMID:19270340) RGD PMID:19270340 NCBI chr19:69,719,707...69,746,244
Ensembl chr19:69,719,394...69,746,244
JBrowse link
G Gphn gephyrin IEP RGD PMID:9130666 RGD:1599855 NCBI chr 6:102,687,405...103,216,679
Ensembl chr 6:102,687,423...103,216,674
JBrowse link
G Gpm6a glycoprotein m6a involved_in IDA PMID:19737934 UniProt PMID:19737934 RGD:8554345 NCBI chr16:43,374,385...43,706,461
Ensembl chr16:43,374,385...43,706,705
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:22623657)
Ensembl
RGD
PMID:22623657 GO_REF:0000107 NCBI chr10:41,710,540...42,030,105
Ensembl chr10:41,711,080...42,030,309
JBrowse link
G Grm6 glutamate metabotropic receptor 6 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:36179691)
Ensembl
RGD
PMID:36179691 GO_REF:0000107 NCBI chr10:35,669,003...35,683,729
Ensembl chr10:35,669,003...35,683,729
JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:26575286)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:26575286 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:41,123,692...41,663,528
Ensembl chr 8:41,123,878...41,664,147
JBrowse link
G Map1b microtubule-associated protein 1B IEP RGD PMID:17151949 RGD:2304009 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:32,551,423...32,657,094
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO (PMID:26704708) RGD PMID:26704708 NCBI chr10:89,638,618...89,736,108
Ensembl chr10:89,638,599...89,736,108
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:2137311|MGI:2183727 (PMID:17920015), (PMID:18295506)
Ensembl
RGD
PMID:17920015 PMID:18295506 GO_REF:0000107 NCBI chr  X:156,932,481...156,995,981
Ensembl chr  X:156,941,234...156,943,560
JBrowse link
G Myo6 myosin VI acts_upstream_of_or_within ISO MGI:1856555 (PMID:15657400) RGD PMID:15657400 NCBI chr 8:89,967,351...90,122,219
Ensembl chr 8:89,967,377...90,122,215
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IMP
NAS
ISS
PMID:15797875
(PMID:10892652)
PMID:37865312
PMID:16242404
GO_REF:0000024
RGD
UniProt
PMID:10892652 PMID:15797875 PMID:37865312 PMID:16242404 GO_REF:0000024, RGD:8554205, RGD:626467852, RGD:151356616 NCBI chr 2:110,184,987...111,110,316
Ensembl chr 2:110,186,573...110,909,984
JBrowse link
G Nlgn2 neuroligin 2 involved_in IDA
IMP
PMID:15797875
PMID:37865312
BHF-UCL
UniProt
PMID:15797875 PMID:37865312 RGD:8554205, RGD:626467852 NCBI chr10:55,042,175...55,056,578
Ensembl chr10:55,043,185...55,056,578
JBrowse link
G Nlgn3 neuroligin 3 involved_in IDA
ISO
PMID:15797875
(PMID:37865312)
RGD PMID:37865312 PMID:15797875 RGD:8554205 NCBI chr  X:70,469,251...70,497,380
Ensembl chr  X:70,469,457...70,497,379
JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO MGI:1928831 (PMID:10707974) RGD PMID:10707974 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:65,953,865...66,999,849
JBrowse link
G Nrg3 neuregulin 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:30049711)
Ensembl
RGD
PMID:30049711 GO_REF:0000107 NCBI chr16:14,256,540...15,374,107
Ensembl chr16:14,257,148...15,374,147
JBrowse link
G Nrxn1 neurexin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
NAS
GO_REF:0000024
MGI:1096362|MGI:1096389 (PMID:12827191)
(PMID:31995730)
GO_REF:0000107
PMID:16242404
BHF-UCL
RGD
Ensembl
PMID:12827191 PMID:31995730 PMID:16242404 GO_REF:0000024 GO_REF:0000107, RGD:151356616 NCBI chr 6:8,931,360...10,077,381
Ensembl chr 6:8,935,523...10,077,374
JBrowse link
G Nrxn2 neurexin 2 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1096389|MGI:1096391 (PMID:12827191)
BHF-UCL
RGD
PMID:12827191 GO_REF:0000024 NCBI chr 1:213,155,673...213,271,526
Ensembl chr 1:213,155,673...213,271,526
JBrowse link
G Nrxn3 neurexin 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1096362|MGI:1096391 (PMID:12827191)
Ensembl
RGD
PMID:12827191 GO_REF:0000107 NCBI chr 6:113,372,667...115,004,073
Ensembl chr 6:113,443,524...115,002,540
JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (PMID:25224828) RGD PMID:25224828 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:113,420,710...113,438,343
JBrowse link
G Plxna1 plexin A1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:123,295,165...123,340,132
Ensembl chr 4:123,297,244...123,340,428
JBrowse link
G Plxna2 plexin A2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:108,683,155...108,888,336
Ensembl chr13:108,691,530...108,887,453
JBrowse link
G Plxna3 plexin A3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:157,266,986...157,282,896
Ensembl chr  X:157,267,107...157,282,891
JBrowse link
G Plxna4 plexin A4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:61,687,483...62,129,467
Ensembl chr 4:61,687,510...62,129,445
JBrowse link
G Plxnb1 plexin B1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:118,621,961...118,647,491
Ensembl chr 8:118,623,040...118,647,489
JBrowse link
G Plxnb2 plexin B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:122,111,917...122,138,201
Ensembl chr 7:122,111,917...122,127,746
JBrowse link
G Plxnb3 plexin B3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:156,645,505...156,660,011
Ensembl chr  X:156,645,182...156,660,003
JBrowse link
G Plxnc1 plexin C1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:31,276,978...31,430,823
Ensembl chr 7:31,276,978...31,431,092
JBrowse link
G Plxnd1 plexin D1 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:22179111)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:22179111 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:150,675,377...150,715,706
Ensembl chr 4:150,675,377...150,715,566
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:16675393) RGD PMID:16675393 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:240,043,707...240,110,330
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO
IEA
(PMID:26021297)
GO_REF:0000107
RGD
Ensembl
PMID:26021297 GO_REF:0000107 NCBI chr13:45,859,930...45,865,468
Ensembl chr13:45,859,961...45,865,610
JBrowse link
G Sdk1 sidekick cell adhesion molecule 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:17,491,430...18,477,914
Ensembl chr12:17,493,869...18,477,935
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:26287463)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:26287463 GO_REF:0000033 GO_REF:0000107 NCBI chr10:99,324,047...99,601,683
Ensembl chr10:99,324,047...99,601,683
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:22699620)
BHF-UCL
RGD
PMID:22699620 GO_REF:0000024 NCBI chr 1:208,575,144...209,020,300
Ensembl chr 1:208,598,772...209,018,736
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:21423165)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21423165 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:122,448,323...122,518,623
Ensembl chr 7:122,448,323...122,510,410
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:6118180 (PMID:28376086)
Ensembl
RGD
PMID:28376086 GO_REF:0000107 NCBI chr18:23,490,422...23,519,599
Ensembl chr18:23,490,425...23,518,730
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:27273464) RGD PMID:27273464 NCBI chr15:92,137,703...92,141,741
Ensembl chr15:92,135,994...92,142,105
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 acts_upstream_of_or_within ISO
IEA
(PMID:23543054)
MGI:4417931 (PMID:23543054)
GO_REF:0000107
RGD
Ensembl
PMID:23543054 GO_REF:0000107 NCBI chr15:93,977,812...93,984,431
Ensembl chr15:93,969,038...93,984,526
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:4127354 (PMID:20231455)
Ensembl
RGD
PMID:20231455 GO_REF:0000107 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:211,432,373...211,473,306
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IDA
IMP
EXP
PMID:33363141 SynGO PMID:33363141 PMID:33363141 PMID:33363141 RGD:405650332, RGD:405650332, RGD:405650332 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328
JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:125,420,276...125,466,149
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(PMID:25589740)
GO_REF:0000107
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:25589740 GO_REF:0000033 GO_REF:0000107 NCBI chr16:58,511,931...58,581,530
Ensembl chr16:58,511,934...58,581,516
JBrowse link
synapse assembly involved in innervation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
GO_REF:0000033
MGI:3849742 (PMID:19398581)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:19398581 GO_REF:0000033 GO_REF:0000107 NCBI chr11:82,056,457...82,072,080
Ensembl chr11:82,056,457...82,072,080
JBrowse link
G Lrit3 leucine-rich repeat, Ig-like and transmembrane domains 3 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:25997951)
Ensembl
RGD
PMID:25997951 GO_REF:0000107 NCBI chr 2:221,011,458...221,034,568
Ensembl chr 2:221,011,595...221,031,747
JBrowse link
synaptic assembly at neuromuscular junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein acts_upstream_of_or_within ISO MGI:88047 (PMID:15689559) RGD PMID:15689559 NCBI chr11:37,506,207...37,724,351
Ensembl chr11:37,506,408...37,722,971
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:11157973) RGD PMID:11157973 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:117,769,517...117,782,199
JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
(PMID:26142302)
Ensembl
RGD
PMID:26142302 GO_REF:0000107 NCBI chr 4:177,240,692...177,246,548
Ensembl chr 4:177,239,908...177,246,531
JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:1856965 (PMID:19346129)
Ensembl
RGD
PMID:19346129 GO_REF:0000107 NCBI chr19:11,609,004...12,057,174
Ensembl chr19:11,609,004...12,054,707
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:2661383|MGI:3580702 (PMID:17119023)
(PMID:18957220)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17119023 PMID:18957220 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:97,885,373...97,939,366
Ensembl chr 3:97,885,400...97,939,370
JBrowse link
tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:22855531) RGD PMID:22855531 NCBI chr10:106,118,106...106,120,951
Ensembl chr10:106,118,108...106,120,951
JBrowse link
G Cldn11 claudin 11 involved_in ISO
IEA
(PMID:30734065)
GO_REF:0000107
RGD
Ensembl
PMID:30734065 GO_REF:0000107 NCBI chr 2:114,136,234...114,149,539
Ensembl chr 2:114,136,234...114,149,539
JBrowse link
G Cldn12 claudin 12 NOT|involved_in ISO (PMID:31511021) RGD PMID:31511021 NCBI chr 4:29,477,468...29,488,465
Ensembl chr 4:29,477,342...29,493,776
JBrowse link
G Cldn18 claudin 18 involved_in ISO (PMID:22079592) RGD PMID:22079592 NCBI chr 8:109,125,819...109,145,110
Ensembl chr 8:109,126,949...109,152,701
JBrowse link
G Cldn5 claudin 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:30734065)
Ensembl
RGD
PMID:30734065 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:95,717,176...95,719,322
JBrowse link
G Dsg3 desmoglein 3 involved_in ISO
IEA
(PMID:31835537)
GO_REF:0000107
RGD
Ensembl
PMID:31835537 GO_REF:0000107 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:12,074,321...12,111,766
JBrowse link
G Ephb2 Eph receptor B2 IDA RGD PMID:33722292 RGD:127285641 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:100,812,121...100,966,566
Ensembl chr 5:100,812,124...100,966,504
JBrowse link
G Patj PATJ, crumbs cell polarity complex component involved_in ISO
IBA
ISS
(PMID:15738264)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:15738264 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:118,177,557...118,480,301
Ensembl chr 5:118,177,565...118,480,301
JBrowse link
tricellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ildr1 immunoglobulin-like domain containing receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25217574)
Ensembl
RGD
PMID:25217574 GO_REF:0000107 NCBI chr11:77,591,146...77,624,268
Ensembl chr11:77,569,621...77,624,140
JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IBA
ISO
IEA
GO_REF:0000033
(PMID:21245199), (PMID:22671589)
GO_REF:0000107
GO_Central
RGD
Ensembl
PMID:21245199 PMID:22671589 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,313,830...95,329,471
Ensembl chr 1:95,313,033...95,329,354
JBrowse link
zonula adherens assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:69,321,072...69,490,630
Ensembl chr 9:69,321,150...69,490,597
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within IEA
ISO
GO_REF:0000107
MGI:3757646 (PMID:17765678)
Ensembl
RGD
PMID:17765678 GO_REF:0000107 NCBI chr15:125,287...237,334
Ensembl chr15:125,290...237,332
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    cellular process 18484
      cellular component organization or biogenesis 7050
        cellular component organization 6802
          cellular component assembly 3377
            cell junction assembly 581
              cell-cell junction assembly + 167
              cell-substrate junction assembly + 103
              negative regulation of cell junction assembly + 44
              positive regulation of cell junction assembly + 136
              regulation of cell junction assembly + 325
              synapse assembly + 327
paths to the root