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ONTOLOGY REPORT - ANNOTATIONS

Term:phagophore assembly site membrane
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Accession:GO:0034045 term browser browse the term
Definition:A cellular membrane associated with the phagophore assembly site.
Synonyms:exact_synonym: PAS membrane
 narrow_synonym: pre-autophagosomal structure membrane
 related_synonym: isolation membrane;   phagophore


show annotations for term's descendants           Sort by:
phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:119,948,443...119,965,702
Ensembl chr 2:119,941,997...119,965,696 		JBrowse link
G ATG13 autophagy related 13 located_in
is_active_in		 IEA
ISO		 (PMID:19597335) Ensembl
UniProt		 PMID:19597335 GO_REF:0000107 NCBI chr 2:15,856,859...15,916,122
Ensembl chr 2:15,856,860...15,916,109 		JBrowse link
G ATG14 autophagy related 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:184,701,020...184,743,752
Ensembl chr 1:184,686,142...184,743,706 		JBrowse link
G ATG16L1 autophagy related 16 like 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:133,651,294...133,693,472
Ensembl chr15:133,651,298...133,693,468 		JBrowse link
G ATG16L2 autophagy related 16 like 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:7,346,973...7,360,189
Ensembl chr 9:7,347,002...7,365,625 		JBrowse link
G ATG2A autophagy related 2A located_in IEA UniProt GO_REF:0000044 NCBI chr 2:7,261,819...7,282,614
Ensembl chr 2:7,262,031...7,282,347 		JBrowse link
G ATG2B autophagy related 2B located_in IEA UniProt GO_REF:0000044 NCBI chr 7:117,506,298...117,586,651
Ensembl chr 7:117,506,302...117,586,545 		JBrowse link
G ATG5 autophagy related 5 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,396 		JBrowse link
G ATG9A autophagy related 9A located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr15:121,254,355...121,265,564
Ensembl chr15:121,254,355...121,265,569 		JBrowse link
G ATG9B autophagy related 9B located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr18:6,200,246...6,208,988
Ensembl chr18:6,200,639...6,208,286 		JBrowse link
G KLC2 kinesin light chain 2 located_in IEA UniProt GO_REF:0000044 NCBI chr 2:6,110,438...6,116,443
Ensembl chr 2:6,102,354...6,116,221 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,424...71,852,694 		JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,324...77,649,548 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr14:23,423,693...23,448,130
Ensembl chr14:23,423,698...23,448,136 		JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:59,806,904...59,878,398
Ensembl chr12:59,806,955...59,878,388 		JBrowse link
G ULK3 unc-51 like kinase 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 7:58,699,989...58,707,191
Ensembl chr 7:58,699,984...58,707,187 		JBrowse link
G WDR45 WD repeat domain 45 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr  X:43,150,691...43,155,981
Ensembl chr  X:43,147,477...43,156,234 		JBrowse link
G WDR45B WD repeat domain 45B is_active_in IBA GO_Central GO_REF:0000033 NCBI chr12:522,762...547,333
Ensembl chr12:522,829...549,156 		JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:11,715,332...11,752,009
Ensembl chr12:11,715,318...11,752,021 		JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:3,800,170...3,830,973
Ensembl chr 3:3,800,186...3,834,413 		JBrowse link
extrinsic component of phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG14 autophagy related 14 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:184,701,020...184,743,752
Ensembl chr 1:184,686,142...184,743,706 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19750
    cellular anatomical structure 19505
      phagophore assembly site 36
        phagophore assembly site membrane 20
          ATG2-ATG18 complex 0
          extrinsic component of phagophore assembly site membrane 1
Path 2
Term Annotations click to browse term
  cellular_component 19750
    cellular anatomical structure 19505
      intracellular anatomical structure 14577
        cytoplasm 10716
          phagophore assembly site 36
            phagophore assembly site membrane 20
              ATG2-ATG18 complex 0
              extrinsic component of phagophore assembly site membrane 1
paths to the root