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ONTOLOGY REPORT - ANNOTATIONS

Term:phagophore assembly site membrane
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Accession:GO:0034045 term browser browse the term
Definition:A cellular membrane associated with the phagophore assembly site.
Synonyms:exact_synonym: PAS membrane
 narrow_synonym: pre-autophagosomal structure membrane
 related_synonym: isolation membrane;   phagophore


show annotations for term's descendants           Sort by:
phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 is_active_in
located_in		 IBA
IDA		 (PMID:11266458), (PMID:12665549) GO_Central
ComplexPortal		 PMID:11266458 PMID:12665549 GO_REF:0000033 NCBI chr18:46,865,484...46,874,683
Ensembl chr18:46,863,211...46,874,647 		JBrowse link
G Atg13 autophagy related 13 is_active_in
located_in		 ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000107 GO_REF:0000119 NCBI chr 2:91,504,957...91,540,947
Ensembl chr 2:91,504,963...91,540,921 		JBrowse link
G Atg14 autophagy related 14 located_in ISO GO_Central GO_REF:0000119 NCBI chr14:47,778,350...47,805,891
Ensembl chr14:47,778,350...47,808,106 		JBrowse link
G Atg16l1 autophagy related 16 like 1 located_in
is_active_in		 IDA
IBA		 (PMID:12665549) ComplexPortal
GO_Central		 PMID:12665549 GO_REF:0000033 NCBI chr 1:87,683,730...87,720,150
Ensembl chr 1:87,683,592...87,720,150 		JBrowse link
G Atg16l2 autophagy related 16 like 2 located_in IDA (PMID:12665549) ComplexPortal PMID:12665549 NCBI chr 7:100,935,521...100,951,474
Ensembl chr 7:100,912,241...100,951,458 		JBrowse link
G Atg2a autophagy related 2A located_in IEA UniProt GO_REF:0000044 NCBI chr19:6,291,508...6,312,332
Ensembl chr19:6,291,698...6,312,365 		JBrowse link
G Atg2b autophagy related 2B located_in IEA UniProt GO_REF:0000044 NCBI chr12:105,579,798...105,651,554
Ensembl chr12:105,582,395...105,651,470 		JBrowse link
G Atg5 autophagy related 5 is_active_in
located_in		 IBA
IDA		 (PMID:11266458), (PMID:12665549), (PMID:23455425) GO_Central
UniProt		 PMID:11266458 PMID:12665549 PMID:23455425 GO_REF:0000033 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287 		JBrowse link
G Atg9a autophagy related 9A located_in IEA UniProt GO_REF:0000044 NCBI chr 1:75,157,509...75,168,654
Ensembl chr 1:75,157,504...75,168,840 		JBrowse link
G Atg9b autophagy related 9B located_in IEA UniProt GO_REF:0000044 NCBI chr 5:24,589,179...24,597,141
Ensembl chr 5:24,589,179...24,597,141 		JBrowse link
G Rab1b RAB1B, member RAS oncogene family located_in IEA
ISO		 UniProt
GO_Central		 GO_REF:0000044 GO_REF:0000119 NCBI chr19:5,149,235...5,157,024
Ensembl chr19:5,149,233...5,157,100 		JBrowse link
G Rab7 RAB7, member RAS oncogene family located_in IDA (PMID:19956673) UniProt PMID:19956673 NCBI chr 6:87,976,088...88,022,252
Ensembl chr 6:87,976,088...88,022,252 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 is_active_in
located_in		 IBA
IDA		 (PMID:18443221) GO_Central
UniProt		 PMID:18443221 GO_REF:0000033 NCBI chr 1:6,284,858...6,346,599
Ensembl chr 1:6,276,421...6,346,872 		JBrowse link
G Stbd1 starch binding domain 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 5:92,750,910...92,754,438
Ensembl chr 5:92,750,900...92,754,438 		JBrowse link
G Ulk1 unc-51 like kinase 1 located_in
is_active_in		 IDA
IBA
ISO		 (PMID:18443221) UniProt
GO_Central		 PMID:18443221 GO_REF:0000033 GO_REF:0000119 NCBI chr 5:110,932,355...110,957,991
Ensembl chr 5:110,932,354...110,957,963 		JBrowse link
G Ulk2 unc-51 like kinase 2 located_in
is_active_in		 IDA
IBA
ISO		 (PMID:18443221) UniProt
GO_Central		 PMID:18443221 GO_REF:0000033 GO_REF:0000119 NCBI chr11:61,666,424...61,750,754
Ensembl chr11:61,666,475...61,745,899 		JBrowse link
G Ulk3 unc-51-like kinase 3 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 9:57,496,423...57,503,516
Ensembl chr 9:57,496,735...57,503,516 		JBrowse link
G Wdr45 WD repeat domain 45 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr  X:7,588,212...7,594,439
Ensembl chr  X:7,580,572...7,594,445 		JBrowse link
G Wdr45b WD repeat domain 45B is_active_in IBA GO_Central GO_REF:0000033 NCBI chr11:121,218,029...121,246,393
Ensembl chr11:121,218,050...121,245,271 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 is_active_in
located_in		 IBA
ISO
IEA		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000119 NCBI chr11:109,464,347...109,502,215
Ensembl chr11:109,464,157...109,502,793 		JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 is_active_in
located_in		 IBA
ISS
ISO		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 NCBI chr 5:142,615,269...142,655,427
Ensembl chr 5:142,613,453...142,656,343 		JBrowse link
extrinsic component of phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 is_active_in
located_in		 IBA
ISO
IEA		 GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 NCBI chr14:47,778,350...47,805,891
Ensembl chr14:47,778,350...47,808,106 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28568
    cellular anatomical structure 19603
      phagophore assembly site 38
        phagophore assembly site membrane 21
          ATG2-ATG18 complex 0
          extrinsic component of phagophore assembly site membrane 1
Path 2
Term Annotations click to browse term
  cellular_component 28568
    cellular anatomical structure 19603
      intracellular anatomical structure 14907
        cytoplasm 12089
          phagophore assembly site 38
            phagophore assembly site membrane 21
              ATG2-ATG18 complex 0
              extrinsic component of phagophore assembly site membrane 1
paths to the root