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ONTOLOGY REPORT - ANNOTATIONS

Term:phagophore assembly site membrane
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Accession:GO:0034045 term browser browse the term
Definition:A cellular membrane associated with the phagophore assembly site.
Synonyms:exact_synonym: PAS membrane
 narrow_synonym: pre-autophagosomal structure membrane
 related_synonym: isolation membrane;   phagophore

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show annotations for term's descendants           Sort by:
phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 located_in ISO (PMID:11266458), (PMID:12665549) ComplexPortal PMID:11266458 PMID:12665549 NCBI chrNW_004955408:35,607,541...35,620,878
Ensembl chrNW_004955408:35,607,541...35,620,878 		JBrowse link
G Atg13 autophagy related 13 is_active_in ISO (PMID:19597335) UniProt PMID:19597335 NCBI chrNW_004955422:1,398,646...1,432,440
Ensembl chrNW_004955422:1,398,593...1,432,438 		JBrowse link
G Atg14 autophagy related 14 located_in ISO (PMID:19270696) UniProt PMID:19270696 NCBI chrNW_004955466:13,898,311...13,972,506
Ensembl chrNW_004955466:13,898,298...13,972,506 		JBrowse link
G Atg16l1 autophagy related 16 like 1 located_in ISO (PMID:12665549) ComplexPortal PMID:12665549 NCBI chrNW_004955453:2,884,497...2,917,581
Ensembl chrNW_004955453:2,880,928...2,917,581 		JBrowse link
G Atg16l2 autophagy related 16 like 2 located_in ISO (PMID:12665549) ComplexPortal PMID:12665549 NCBI chrNW_004955414:18,600,904...18,618,048
Ensembl chrNW_004955414:18,604,505...18,618,046 		JBrowse link
G Atg5 autophagy related 5 located_in ISO (PMID:11266458), (PMID:12665549), (PMID:23455425) UniProt PMID:11266458 PMID:12665549 PMID:23455425 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827 		JBrowse link
G Rab1b RAB1B, member RAS oncogene family located_in ISO (PMID:20545908) UniProt PMID:20545908 NCBI chrNW_004955422:19,039,741...19,047,088
Ensembl chrNW_004955422:19,039,632...19,047,088 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family located_in ISO (PMID:19956673) UniProt PMID:19956673 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Rb1cc1 RB1 inducible coiled-coil 1 located_in ISO (PMID:18443221) UniProt PMID:18443221 NCBI chrNW_004955454:12,201,566...12,257,383
Ensembl chrNW_004955454:12,200,750...12,257,389 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 located_in ISO (PMID:18443221)
(PMID:18936157), (PMID:22885598)		 UniProt PMID:18443221 PMID:18936157 PMID:22885598 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133 		JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 located_in ISO (PMID:18443221)
(PMID:18936157)		 UniProt PMID:18443221 PMID:18936157 NCBI chrNW_004955467:818,975...894,103
Ensembl chrNW_004955467:818,076...894,106 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 located_in ISO (PMID:17618624) UniProt PMID:17618624 NCBI chrNW_004955478:4,309,975...4,341,107
Ensembl chrNW_004955478:4,309,880...4,343,934 		JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 located_in ISO (PMID:20505359) UniProt PMID:20505359 NCBI chrNW_004955460:10,090,343...10,132,724
Ensembl chrNW_004955460:10,090,349...10,130,384 		JBrowse link
extrinsic component of phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 located_in ISO (PMID:21518905) UniProt PMID:21518905 NCBI chrNW_004955466:13,898,311...13,972,506
Ensembl chrNW_004955466:13,898,298...13,972,506 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12815
    cellular anatomical structure 12663
      phagophore assembly site 25
        phagophore assembly site membrane 13
          ATG2-ATG18 complex 0
          extrinsic component of phagophore assembly site membrane 1
Path 2
Term Annotations click to browse term
  cellular_component 12815
    cellular anatomical structure 12663
      intracellular anatomical structure 10798
        cytoplasm 8513
          phagophore assembly site 25
            phagophore assembly site membrane 13
              ATG2-ATG18 complex 0
              extrinsic component of phagophore assembly site membrane 1
paths to the root