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ONTOLOGY REPORT - ANNOTATIONS

Term:phagophore assembly site membrane
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Accession:GO:0034045 term browser browse the term
Definition:A cellular membrane associated with the phagophore assembly site.
Synonyms:exact_synonym: PAS membrane
 narrow_synonym: pre-autophagosomal structure membrane
 related_synonym: isolation membrane;   phagophore


show annotations for term's descendants           Sort by:
phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:111,184,617...111,196,038 JBrowse link
G ATG13 autophagy related 13 located_in
is_active_in		 IEA
ISO		 (PMID:19597335) Ensembl
UniProt		 PMID:19597335 GO_REF:0000107 NCBI chr11:46,567,728...46,623,609
Ensembl chr11:47,126,380...47,182,850 		JBrowse link
G ATG14 autophagy related 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:35,953,228...35,998,650
Ensembl chr14:54,226,720...54,272,018 		JBrowse link
G ATG16L1 autophagy related 16 like 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:120,479,534...120,523,563
Ensembl chr2B:239,392,990...239,436,766 		JBrowse link
G ATG16L2 autophagy related 16 like 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,893,365...67,921,794
Ensembl chr11:71,115,768...71,131,081 		JBrowse link
G ATG2A autophagy related 2A located_in IEA UniProt GO_REF:0000044 NCBI chr11:60,251,169...60,273,831
Ensembl chr11:63,591,896...63,614,902 		JBrowse link
G ATG2B autophagy related 2B located_in IEA UniProt GO_REF:0000044 NCBI chr14:76,910,943...76,992,969
Ensembl chr14:96,237,825...96,314,881 		JBrowse link
G ATG5 autophagy related 5 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807 		JBrowse link
G ATG9A autophagy related 9A located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr2B:106,477,007...106,487,249
Ensembl chr2B:225,067,590...225,078,065 		JBrowse link
G ATG9B autophagy related 9B located_in IEA UniProt GO_REF:0000044 GO_REF:0000104 NCBI chr 7:142,600,894...142,614,336
Ensembl chr 7:154,756,535...154,764,744 		JBrowse link
G RAB1B RAB1B, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,634,017...61,642,945
Ensembl chr11:64,959,957...64,968,843 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in ISO (PMID:19956673) UniProt PMID:19956673 NCBI chr 3:125,784,604...125,873,051 JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:49,046,830...49,138,795
Ensembl chr 8:46,430,131...46,521,722 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:129,549,399...129,579,087 JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:31,262,168...31,362,251
Ensembl chr17:36,409,312...36,507,786 		JBrowse link
G ULK3 unc-51 like kinase 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:53,778,676...53,785,754
Ensembl chr15:73,396,341...73,403,362 		JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:62,357,952...62,394,620
Ensembl chr17:67,748,201...67,784,389 		JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,446,621...5,488,170
Ensembl chr 7:5,467,334...5,510,538 		JBrowse link
extrinsic component of phagophore assembly site membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG14 autophagy related 14 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:35,953,228...35,998,650
Ensembl chr14:54,226,720...54,272,018 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20468
    cellular anatomical structure 20035
      phagophore assembly site 37
        phagophore assembly site membrane 18
          ATG2-ATG18 complex 0
          extrinsic component of phagophore assembly site membrane 1
Path 2
Term Annotations click to browse term
  cellular_component 20468
    cellular anatomical structure 20035
      intracellular anatomical structure 16641
        cytoplasm 11385
          phagophore assembly site 37
            phagophore assembly site membrane 18
              ATG2-ATG18 complex 0
              extrinsic component of phagophore assembly site membrane 1
paths to the root