Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:proton-transporting V-type ATPase, V1 domain
go back to main search page
Accession:GO:0033180 term browser browse the term
Definition:A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.


show annotations for term's descendants           Sort by:
proton-transporting V-type ATPase, V1 domain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1a ATPase H+ transporting V1 subunit A part_of ISO
IEA		 (PMID:28793259)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:28793259 GO_REF:0000002 GO_REF:0000107 NCBI chr11:56,561,444...56,614,694
Ensembl chr11:56,560,974...56,614,694 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:117,781,444...117,800,103
Ensembl chr 4:116,223,799...116,242,475 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745 		JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 part_of ISO
IEA		 (PMID:12527205)
GO_REF:0000107
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:12527205 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:69,834,464...69,872,278
Ensembl chr 7:69,834,463...69,872,278 		JBrowse link
G Atp6v1c2 ATPase H+ transporting V1 subunit C2 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:40,080,545...40,144,199
Ensembl chr 6:40,080,547...40,120,028 		JBrowse link
G Atp6v1f ATPase H+ transporting V1 subunit F part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:59,033,020...59,035,980 JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 part_of ISO
IEA		 (PMID:12527205)
GO_REF:0000107		 RGD
Ensembl		 PMID:12527205 GO_REF:0000107 NCBI chr 5:76,961,462...76,967,642
Ensembl chr 5:76,961,499...76,969,463 		JBrowse link
G ENSRNOG00000065235 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:58,069,339...58,070,390 JBrowse link
G Rnase4 ribonuclease A family member 4 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:26,786,287...26,803,634
Ensembl chr15:24,312,464...24,330,117 		JBrowse link
vacuolar proton-transporting V-type ATPase, V1 domain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1a ATPase H+ transporting V1 subunit A part_of ISO
IEA		 (PMID:33065002)
GO_REF:0000107		 RGD
Ensembl		 PMID:33065002 GO_REF:0000107 NCBI chr11:56,561,444...56,614,694
Ensembl chr11:56,560,974...56,614,694 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 part_of ISO
IEA		 (PMID:33065002)
GO_REF:0000107		 RGD
Ensembl		 PMID:33065002 GO_REF:0000107 NCBI chr 4:117,781,444...117,800,103
Ensembl chr 4:116,223,799...116,242,475 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 part_of IDA
IEA
ISO		 PMID:32165585
GO_REF:0000107
(PMID:33065002)		 Ensembl
RGD		 PMID:33065002 PMID:32165585 GO_REF:0000107, RGD:39458019 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745 		JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 part_of ISS
IBA		 GO_REF:0000024
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr 7:69,834,464...69,872,278
Ensembl chr 7:69,834,463...69,872,278 		JBrowse link
G Atp6v1c2 ATPase H+ transporting V1 subunit C2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:40,080,545...40,144,199
Ensembl chr 6:40,080,547...40,120,028 		JBrowse link
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 part_of IDA
IEA
ISO		 PMID:32165585
GO_REF:0000107
(PMID:33065002)		 Ensembl
RGD		 PMID:33065002 PMID:32165585 GO_REF:0000107, RGD:39458019 NCBI chr 4:154,022,358...154,044,486
Ensembl chr 4:154,022,358...154,044,584 		JBrowse link
G Atp6v1f ATPase H+ transporting V1 subunit F part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:59,033,020...59,035,980 JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 part_of ISO
IEA
IBA		 (PMID:33065002)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:33065002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:76,961,462...76,967,642
Ensembl chr 5:76,961,499...76,969,463 		JBrowse link
G Atp6v1g1l1 ATPase H+ transporting V1 subunit G1 like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:28,663,974...28,664,273
Ensembl chr10:28,663,974...28,664,273 		JBrowse link
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:3,587,681...3,591,309
Ensembl chr20:3,587,686...3,590,481 		JBrowse link
G Atp6v1g3 ATPase H+ transporting V1 subunit G3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:52,351,787...52,376,784
Ensembl chr13:49,794,222...49,825,247 		JBrowse link
G Atp6v1h ATPase H+ transporting V1 subunit H part_of IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 5:19,176,849...19,282,516
Ensembl chr 5:14,378,257...14,537,962 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21364
    protein-containing complex 6830
      membrane protein complex 1452
        proton-transporting two-sector ATPase complex, catalytic domain 15
          proton-transporting V-type ATPase, V1 domain 14
            plasma membrane proton-transporting V-type ATPase, V1 domain 0
            vacuolar proton-transporting V-type ATPase, V1 domain + 12
Path 2
Term Annotations click to browse term
  cellular_component 21364
    cellular anatomical structure 21069
      membrane 10504
        membrane protein complex 1452
          transmembrane transporter complex 551
            ATPase dependent transmembrane transport complex 58
              cation-transporting ATPase complex 55
                proton-transporting V-type ATPase complex 34
                  proton-transporting V-type ATPase, V1 domain 14
                    plasma membrane proton-transporting V-type ATPase, V1 domain 0
                    vacuolar proton-transporting V-type ATPase, V1 domain + 12
paths to the root