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ONTOLOGY REPORT - ANNOTATIONS

Term:sarcoplasmic reticulum lumen
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Accession:GO:0033018 term browser browse the term
Definition:The volume enclosed by the membranes of the sarcoplasmic reticulum.

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show annotations for term's descendants           Sort by:
sarcoplasmic reticulum lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H ASPH aspartate beta-hydroxylase located_in TAS (PMID:22123818) BHF-UCL PMID:22123818 NCBI chr 8:61,500,556...61,714,592
Ensembl chr 8:61,500,556...61,714,640 		JBrowse link
G N Calr calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624901:511,295...515,208
Ensembl chrNW_004624901:511,052...516,757 		JBrowse link
G G CALR calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chr 6:11,618,691...11,624,299
Ensembl chr 6:11,618,396...11,623,792 		JBrowse link
G P CALR calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,229...66,102,132 		JBrowse link
G S Calr calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936659:1,994,695...1,999,070
Ensembl chrNW_004936659:1,994,648...1,999,430 		JBrowse link
G D CALR calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chr20:49,251,390...49,255,291
Ensembl chr20:49,251,777...49,255,245 		JBrowse link
G B CALR calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chr19:12,501,013...12,506,909
Ensembl chr19:13,242,900...13,249,416 		JBrowse link
G R Calr calreticulin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:40,213,367...40,218,262
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G M Calr calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chr 8:85,568,717...85,573,560
Ensembl chr 8:85,568,479...85,573,563 		JBrowse link
G H CALR calreticulin located_in IEA UniProt GO_REF:0000044 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489 		JBrowse link
G N Calu calumenin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004624783:7,417,505...7,448,711 JBrowse link
G G CALU calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr21:97,338,875...97,370,947
Ensembl chr21:97,338,913...97,373,156 		JBrowse link
G P CALU calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr18:19,841,718...19,875,804
Ensembl chr18:19,841,719...19,875,786 		JBrowse link
G S Calu calumenin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936479:15,665,979...15,697,016
Ensembl chrNW_004936479:15,665,946...15,698,560 		JBrowse link
G D CALU calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr14:7,869,946...7,899,302
Ensembl chr14:7,872,076...7,925,078 		JBrowse link
G B CALU calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr 7:120,691,092...120,723,303
Ensembl chr 7:133,223,269...133,247,167 		JBrowse link
G R Calu calumenin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:58,914,456...58,941,957
Ensembl chr 4:57,948,997...57,976,593 		JBrowse link
G M Calu calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr 6:29,348,105...29,376,674
Ensembl chr 6:29,348,068...29,377,109 		JBrowse link
G H CALU calumenin located_in IEA UniProt GO_REF:0000044 NCBI chr 7:128,739,359...128,773,400
Ensembl chr 7:128,739,292...128,773,400 		JBrowse link
G N Casq1 calsequestrin 1 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624794:1,054,119...1,064,652
Ensembl chrNW_004624794:1,050,955...1,065,287 		JBrowse link
G G CASQ1 calsequestrin 1 located_in IEA UniProt
Ensembl
TreeGrafter		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr20:3,744,921...3,759,220
Ensembl chr20:3,744,780...3,756,435 		JBrowse link
G P CASQ1 calsequestrin 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 4:90,276,752...90,288,990
Ensembl chr 4:90,276,757...90,288,250 		JBrowse link
G S Casq1 calsequestrin 1 located_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
G D CASQ1 calsequestrin 1 located_in
is_active_in		 IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000044 NCBI chr38:22,012,060...22,020,430
Ensembl chr38:22,011,060...22,020,383 		JBrowse link
G B CASQ1 calsequestrin 1 located_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:135,544,249...135,555,545
Ensembl chr 1:139,465,605...139,476,969 		JBrowse link
G C Casq1 calsequestrin 1 located_in ISO (PMID:16600288), (PMID:22049211) UniProt PMID:16600288 PMID:22049211 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836 		JBrowse link
G R Casq1 calsequestrin 1 located_in
is_active_in		 ISS
ISO
IBA		 GO_REF:0000024
(PMID:16600288), (PMID:22049211)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:16600288 PMID:22049211 GO_REF:0000024 GO_REF:0000033 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G M Casq1 calsequestrin 1 located_in
is_active_in		 IDA
IBA		 (PMID:16600288), (PMID:22049211) UniProt
GO_Central		 PMID:16600288 PMID:22049211 GO_REF:0000033 NCBI chr 1:172,037,461...172,047,462
Ensembl chr 1:172,037,461...172,047,435 		JBrowse link
G H CASQ1 calsequestrin 1 located_in
is_active_in		 IEA
IBA
ISS		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:160,190,575...160,201,886
Ensembl chr 1:160,190,575...160,201,886 		JBrowse link
G N Casq2 calsequestrin 2 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004624772:11,458,994...11,521,809
Ensembl chrNW_004624772:11,456,554...11,521,939 		JBrowse link
G G CASQ2 calsequestrin 2 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chr20:17,937,089...18,008,433
Ensembl chr20:17,937,524...18,008,786 		JBrowse link
G P CASQ2 calsequestrin 2 located_in
is_active_in		 IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000044 NCBI chr 4:104,918,204...104,984,019
Ensembl chr 4:104,918,221...104,984,020 		JBrowse link
G S Casq2 calsequestrin 2 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chrNW_004936627:1,001,681...1,069,377
Ensembl chrNW_004936627:1,001,678...1,069,438 		JBrowse link
G D CASQ2 calsequestrin 2 located_in
is_active_in		 IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000044 NCBI chr17:53,233,966...53,299,093
Ensembl chr17:53,224,438...53,299,708 		JBrowse link
G B CASQ2 calsequestrin 2 located_in IEA UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000118 NCBI chr 1:86,795,392...86,864,196
Ensembl chr 1:121,844,097...121,913,311 		JBrowse link
G C Casq2 calsequestrin 2 located_in ISO (PMID:19920148) UniProt PMID:19920148 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200 		JBrowse link
G R Casq2 calsequestrin 2 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000044
(PMID:19920148)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:19920148 GO_REF:0000033 GO_REF:0000044 NCBI chr 2:192,214,556...192,270,821
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G M Casq2 calsequestrin 2 located_in
is_active_in		 IDA
IBA		 (PMID:19920148) UniProt
GO_Central		 PMID:19920148 GO_REF:0000033 NCBI chr 3:101,993,731...102,053,830
Ensembl chr 3:101,993,731...102,053,830 		JBrowse link
G H CASQ2 calsequestrin 2 located_in
is_active_in		 IC
IBA
IEA		 (PMID:16908766) BHF-UCL
GO_Central
UniProt		 PMID:16908766 GO_REF:0000033 GO_REF:0000044 NCBI chr 1:115,700,021...115,768,714
Ensembl chr 1:115,698,038...115,837,921 		JBrowse link
G H HRC histidine rich calcium binding protein located_in IEA
TAS		 (PMID:11504710) UniProt
BHF-UCL		 PMID:11504710 GO_REF:0000044 NCBI chr19:49,151,198...49,155,396
Ensembl chr19:49,151,198...49,155,396 		JBrowse link
G P HSP90B1 heat shock protein 90 beta family member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 5:80,511,513...80,531,016
Ensembl chr 5:80,511,506...80,530,991 		JBrowse link
G D HSP90B1 heat shock protein 90 beta family member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr15:42,456,793...42,474,122
Ensembl chr15:42,456,764...42,579,311 		JBrowse link
G R Hsp90b1 heat shock protein 90 beta family member 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:22,997,962...23,012,293
Ensembl chr 7:21,110,457...21,124,788 		JBrowse link
G M Hsp90b1 heat shock protein 90, beta (Grp94), member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr10:86,526,705...86,541,308
Ensembl chr10:86,526,073...86,541,373 		JBrowse link
G H HSP90B1 heat shock protein 90 beta family member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr12:103,930,410...103,947,926
Ensembl chr12:103,930,107...103,953,931 		JBrowse link
G R Manf mesencephalic astrocyte-derived neurotrophic factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:116,427,053...116,430,259
Ensembl chr 8:107,548,352...107,551,438 		JBrowse link
G M Manf mesencephalic astrocyte-derived neurotrophic factor located_in IEA UniProt GO_REF:0000044 NCBI chr 9:106,765,952...106,769,137
Ensembl chr 9:106,715,511...106,769,178 		JBrowse link
G H MANF mesencephalic astrocyte derived neurotrophic factor located_in IEA UniProt GO_REF:0000044 NCBI chr 3:51,385,291...51,389,397
Ensembl chr 3:51,385,291...51,389,397 		JBrowse link
G M Srl sarcalumenin located_in IEA UniProt GO_REF:0000044 NCBI chr16:4,294,843...4,359,772
Ensembl chr16:4,298,080...4,359,680 		JBrowse link
G H SRL sarcalumenin located_in IEA UniProt GO_REF:0000044 NCBI chr16:4,189,374...4,242,080
Ensembl chr16:4,189,374...4,242,080 		JBrowse link
G H TRDN triadin located_in TAS (PMID:17569730) Reactome PMID:17569730 Reactome:R-HSA-2855020 NCBI chr 6:123,216,339...123,636,950
Ensembl chr 6:123,216,339...123,637,189 		JBrowse link
terminal cisterna lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Casq1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chrNW_004624794:1,054,119...1,064,652
Ensembl chrNW_004624794:1,050,955...1,065,287 		JBrowse link
G G CASQ1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chr20:3,744,921...3,759,220
Ensembl chr20:3,744,780...3,756,435 		JBrowse link
G P CASQ1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chr 4:90,276,752...90,288,990
Ensembl chr 4:90,276,757...90,288,250 		JBrowse link
G S Casq1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chrNW_004936740:430,367...442,468
Ensembl chrNW_004936740:430,026...442,539 		JBrowse link
G D CASQ1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chr38:22,012,060...22,020,430
Ensembl chr38:22,011,060...22,020,383 		JBrowse link
G B CASQ1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chr 1:135,544,249...135,555,545
Ensembl chr 1:139,465,605...139,476,969 		JBrowse link
G C Casq1 calsequestrin 1 ISO RGD PMID:6355123 RGD:2313258 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836 		JBrowse link
G R Casq1 calsequestrin 1 IDA RGD PMID:6355123 RGD:2313258 NCBI chr13:87,203,021...87,212,710
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G M Casq1 calsequestrin 1 located_in ISO
IEA		 RGD
Ensembl
GO_Central		 PMID:6355123 GO_REF:0000096 GO_REF:0000107 RGD:2313258 NCBI chr 1:172,037,461...172,047,462
Ensembl chr 1:172,037,461...172,047,435 		JBrowse link
G H CASQ1 calsequestrin 1 located_in ISO
IEA		 RGD
Ensembl		 PMID:6355123 GO_REF:0000107 RGD:2313258 NCBI chr 1:160,190,575...160,201,886
Ensembl chr 1:160,190,575...160,201,886 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 205298
    cellular anatomical structure 193827
      endomembrane system 41336
        endoplasmic reticulum 17136
          endoplasmic reticulum lumen 1103
            sarcoplasmic reticulum lumen 51
              longitudinal sarcoplasmic reticulum lumen 0
              terminal cisterna lumen 10
Path 2
Term Annotations click to browse term
  cellular_component 205298
    cellular anatomical structure 193827
      intracellular anatomical structure 153831
        intracellular organelle 137574
          intracellular membrane-bounded organelle 124691
            endoplasmic reticulum 17136
              endoplasmic reticulum lumen 1103
                sarcoplasmic reticulum lumen 51
                  longitudinal sarcoplasmic reticulum lumen 0
                  terminal cisterna lumen 10
paths to the root