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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of transcription elongation by RNA polymerase II
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Accession:GO:0032968 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.
Synonyms:exact_synonym: positive regulation of RNA elongation from RNA polymerase II promoter;   positive regulation of transcription elongation from RNA polymerase II promoter
 related_synonym: positive regulation of gene-specific transcription elongation from RNA polymerase II promoter
 alt_id: GO:0090040

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positive regulation of transcription elongation by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 acts_upstream_of_or_within
involved_in 		ISO (PMID:18039861)
(PMID:19103749) 		MGI
UniProt		 PMID:18039861 PMID:19103749 NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852 		JBrowse link
G Btbd18 BTB domain containing 18 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624864:3,011,589...3,014,676
Ensembl chrNW_004624864:3,008,757...3,014,153 		JBrowse link
G Cbx7 chromobox 7 ISO RGD PMID:19706751 RGD:9586729 NCBI chrNW_004624752:9,133,587...9,151,216
Ensembl chrNW_004624752:9,133,569...9,151,934 		JBrowse link
G Ccnk cyclin K involved_in ISO (PMID:22988298), (PMID:26748711) ComplexPortal PMID:22988298 PMID:26748711 NCBI chrNW_004624734:4,366,884...4,392,934
Ensembl chrNW_004624734:4,367,396...4,383,419 		JBrowse link
G Ccnt1 cyclin T1 involved_in ISO (PMID:30134174), (PMID:35393539), (PMID:9499409) UniProt PMID:9499409 PMID:30134174 PMID:35393539 NCBI chrNW_004624816:3,396,740...3,445,976
Ensembl chrNW_004624816:3,421,709...3,442,170 		JBrowse link
G Ccnt2 cyclin T2 involved_in ISO (PMID:9499409) ComplexPortal PMID:9499409 NCBI chrNW_004624732:34,307,124...34,357,354 JBrowse link
G Cdc73 cell division cycle 73 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624814:298,015...460,314
Ensembl chrNW_004624814:299,444...460,391 		JBrowse link
G Cdk12 cyclin dependent kinase 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624795:3,490,081...3,564,144
Ensembl chrNW_004624795:3,512,429...3,562,515 		JBrowse link
G Cdk13 cyclin dependent kinase 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:21,100,780...21,202,147
Ensembl chrNW_004624740:21,105,212...21,202,111 		JBrowse link
G Cdk9 cyclin dependent kinase 9 involved_in ISO (PMID:14701750), (PMID:30134174), (PMID:9499409) UniProt PMID:9499409 PMID:14701750 PMID:30134174 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in ISO (PMID:15894542) UniProt PMID:15894542 NCBI chrNW_004624759:15,459,436...15,520,225
Ensembl chrNW_004624759:15,459,288...15,520,924 		JBrowse link
G Eapp E2F associated phosphoprotein acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624838:2,159,869...2,180,879
Ensembl chrNW_004624838:2,160,036...2,180,597 		JBrowse link
G Ell elongation factor for RNA polymerase II involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:1,665,407...1,709,509
Ensembl chrNW_004624908:1,666,647...1,709,425 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:14,515,727...14,583,805 JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:10,784,575...10,789,838
Ensembl chrNW_004624804:10,786,900...10,789,766 		JBrowse link
G Eloc elongin C ISO RGD PMID:8202474 RGD:730008 NCBI chrNW_004624744:17,270,861...17,299,541
Ensembl chrNW_004624744:17,270,476...17,299,029 		JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624828:3,512,990...3,521,848
Ensembl chrNW_004624828:3,513,027...3,521,650 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:21245044) MGI PMID:21245044 NCBI chrNW_004624740:3,785,342...3,875,892
Ensembl chrNW_004624740:3,785,209...3,875,841 		JBrowse link
G Ldb1 LIM domain binding 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624831:1,573,058...1,584,861
Ensembl chrNW_004624831:1,571,942...1,584,775 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:8,467,914...8,485,978
Ensembl chrNW_004624731:8,467,877...8,485,851 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:18086894 RGD:2292639 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934 		JBrowse link
G Ppp1r10 protein phosphatase 1 regulatory subunit 10 involved_in ISO (PMID:39603239), (PMID:39603240) UniProt PMID:39603239 PMID:39603240 NCBI chrNW_004624754:25,074,980...25,091,798
Ensembl chrNW_004624754:25,076,333...25,091,907 		JBrowse link
G Pwwp2a PWWP domain containing 2A involved_in ISO (PMID:30228260) UniProt PMID:30228260 NCBI chrNW_004624733:29,404,918...29,443,674
Ensembl chrNW_004624733:29,404,778...29,441,414 		JBrowse link
G Pwwp2b PWWP domain containing 2B involved_in ISO (PMID:30228260) UniProt PMID:30228260 NCBI chrNW_004624737:14,420,293...14,442,969
Ensembl chrNW_004624737:14,419,670...14,442,933 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:16427012) UniProt PMID:16427012 NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (PMID:17234882) UniProt PMID:17234882 NCBI chrNW_004624786:1,226,131...1,271,872
Ensembl chrNW_004624786:1,238,082...1,271,875 		JBrowse link
G Tox4 TOX high mobility group box family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:7,493,911...7,511,852
Ensembl chrNW_004624825:7,493,953...7,511,846 		JBrowse link
G Wdr82 WD repeat domain 82 involved_in ISO (PMID:39603239), (PMID:39603240) UniProt PMID:39603239 PMID:39603240 NCBI chrNW_004624730:6,032,426...6,067,303 JBrowse link
G Zmynd8 zinc finger MYND-type containing 8 involved_in ISO (PMID:30134174)
(PMID:26655721) 		UniProt PMID:26655721 PMID:30134174 NCBI chrNW_004624790:7,473,739...7,611,612
Ensembl chrNW_004624790:7,493,066...7,611,485 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17647
    cellular process 17219
      metabolic process 10996
        biosynthetic process 7897
          macromolecule biosynthetic process 6992
            gene expression 6569
              DNA-templated transcription 3197
                DNA-templated transcription elongation 96
                  transcription elongation by RNA polymerase II 82
                    positive regulation of transcription elongation by RNA polymerase II 31
Path 2
Term Annotations click to browse term
  biological_process 17647
    cellular process 17219
      metabolic process 10996
        primary metabolic process 9827
          nucleobase-containing compound metabolic process 5857
            nucleic acid metabolic process 5350
              RNA metabolic process 4810
                regulation of RNA metabolic process 3311
                  positive regulation of RNA metabolic process 1754
                    positive regulation of RNA biosynthetic process 1629
                      positive regulation of DNA-templated transcription 1627
                        positive regulation of transcription by RNA polymerase II 1299
                          positive regulation of transcription elongation by RNA polymerase II 31
paths to the root