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ONTOLOGY REPORT - ANNOTATIONS

Term:detection of molecule of bacterial origin
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Accession:GO:0032490 term browser browse the term
Definition:The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.
Synonyms:exact_synonym: detection of bacteria associated molecule;   detection of bacterial associated molecule;   detection of bacterium associated molecule


show annotations for term's descendants           Sort by:
detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein involved_in ISO
IEA		 (PMID:11528597)
GO_REF:0000107		 RGD
Ensembl		 PMID:11528597 GO_REF:0000107 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586 		JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (PMID:17128265) RGD PMID:17128265 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796 		JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IBA
ISO		 GO_REF:0000033
(PMID:21217009)		 GO_Central
RGD		 PMID:21217009 GO_REF:0000033 NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743 		JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
G Tlr6 toll-like receptor 6 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685 		JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp4 caspase 4 involved_in ISO (PMID:23887873), (PMID:24031018), (PMID:30589883), (PMID:38632402) RGD PMID:23887873 PMID:24031018 PMID:30589883 PMID:38632402 NCBI chr 8:2,599,017...2,635,097
Ensembl chr 8:2,598,876...2,635,092 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO
IBA		 (PMID:19252480)
GO_REF:0000033		 RGD
GO_Central		 PMID:19252480 GO_REF:0000033 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:37001519)		 UniProt
RGD		 PMID:37001519 GO_REF:0000024 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IEA		 (PMID:12651854)
GO_REF:0000107		 RGD
Ensembl		 PMID:12651854 GO_REF:0000107 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
IEA
ISS
IBA		 (PMID:19252480)
GO_REF:0000107
GO_REF:0000024
GO_REF:0000033
(PMID:28098138)		 RGD
Ensembl
UniProt
GO_Central		 PMID:19252480 PMID:28098138 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:15998797)
(PMID:12527755)		 RGD PMID:12527755 PMID:15998797 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177 		JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll-like receptor 1 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125 		JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    response to stimulus 11005
      response to chemical 5927
        detection of chemical stimulus 1450
          detection of molecule of bacterial origin 13
            detection of bacterial lipoprotein + 4
            detection of lipopolysaccharide 6
            detection of lipoteichoic acid 1
            detection of peptidoglycan + 2
Path 2
Term Annotations click to browse term
  biological_process 20536
    response to stimulus 11005
      response to biotic stimulus 1923
        response to external biotic stimulus 1875
          response to other organism 1871
            response to bacterium 1002
              response to molecule of bacterial origin 576
                detection of molecule of bacterial origin 13
                  detection of bacterial lipoprotein + 4
                  detection of lipopolysaccharide 6
                  detection of lipoteichoic acid 1
                  detection of peptidoglycan + 2
paths to the root