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ONTOLOGY REPORT - ANNOTATIONS

Term:detection of molecule of bacterial origin
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Accession:GO:0032490 term browser browse the term
Definition:The series of events in which a stimulus from a molecule of bacterial origin is received and converted into a molecular signal.
Synonyms:exact_synonym: detection of bacteria associated molecule;   detection of bacterial associated molecule;   detection of bacterium associated molecule


show annotations for term's descendants           Sort by:
detection of molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein involved_in ISO
IEA 		(PMID:11528597)
GO_REF:0000107 		RGD
Ensembl		 PMID:11528597 GO_REF:0000107 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518 		JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO
IEA 		(PMID:17128265)
GO_REF:0000107 		RGD
Ensembl		 PMID:17128265 GO_REF:0000107 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:115,742,889...115,750,148 		JBrowse link
detection of bacterial lipoprotein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssc5d scavenger receptor cysteine rich family member with 5 domains involved_in IBA
ISO
IEA 		GO_REF:0000033
(PMID:21217009)
GO_REF:0000107 		GO_Central
RGD
Ensembl		 PMID:21217009 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:77,920,781...77,939,284
Ensembl chr 1:77,920,783...77,938,574 		JBrowse link
detection of diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
G Tlr6 toll-like receptor 6 acts_upstream_of_or_within ISO
IEA 		(PMID:19931471)
GO_REF:0000107 		RGD
Ensembl		 PMID:19931471 GO_REF:0000107 NCBI chr14:43,715,809...43,727,019
Ensembl chr14:43,698,751...43,740,462 		JBrowse link
detection of lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp4 caspase 4 involved_in ISO (PMID:23887873), (PMID:24031018), (PMID:30589883), (PMID:38632402) RGD PMID:23887873 PMID:24031018 PMID:30589883 PMID:38632402 NCBI chr 8:10,883,817...10,919,978
Ensembl chr 8:10,883,769...10,920,727 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO
IEA
IBA 		(PMID:19252480)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:19252480 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:37001519) 		UniProt
Ensembl
RGD		 PMID:37001519 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:134,247,153...134,268,044
Ensembl chr 7:134,247,192...134,268,041 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IEA 		(PMID:12651854)
GO_REF:0000107 		RGD
Ensembl		 PMID:12651854 GO_REF:0000107 NCBI chr12:36,957,302...37,023,982
Ensembl chr12:36,957,496...37,023,980 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
IEA
ISS
IBA 		(PMID:19252480)
GO_REF:0000107
GO_REF:0000024
GO_REF:0000033
(PMID:15356140), (PMID:28098138) 		RGD
Ensembl
UniProt
GO_Central		 PMID:15356140 PMID:19252480 PMID:28098138 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779 		JBrowse link
detection of lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779 		JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:15998797)
GO_REF:0000107
(PMID:12527755) 		RGD
Ensembl		 PMID:12527755 PMID:15998797 GO_REF:0000107 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846 		JBrowse link
detection of peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779 		JBrowse link
detection of triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr1 toll-like receptor 1 acts_upstream_of_or_within ISO
IEA 		(PMID:19931471)
GO_REF:0000107 		RGD
Ensembl		 PMID:19931471 GO_REF:0000107 NCBI chr14:43,737,761...43,750,389
Ensembl chr14:43,740,379...43,756,243 		JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:19931471) RGD PMID:19931471 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19315
    response to stimulus 10637
      response to chemical 5892
        detection of chemical stimulus 1388
          detection of molecule of bacterial origin 13
            detection of bacterial lipoprotein + 4
            detection of lipopolysaccharide 6
            detection of lipoteichoic acid 1
            detection of peptidoglycan + 2
Path 2
Term Annotations click to browse term
  biological_process 19315
    response to stimulus 10637
      response to biotic stimulus 1976
        response to external biotic stimulus 1926
          response to other organism 1922
            response to bacterium 1017
              response to molecule of bacterial origin 594
                detection of molecule of bacterial origin 13
                  detection of bacterial lipoprotein + 4
                  detection of lipopolysaccharide 6
                  detection of lipoteichoic acid 1
                  detection of peptidoglycan + 2
paths to the root