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ONTOLOGY REPORT - ANNOTATIONS

Term:stereocilium tip
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Accession:GO:0032426 term browser browse the term
Definition:A distinct compartment at the tip of a stereocilium, distal to the site of attachment to the apical cell surface. It consists of a dense matrix bridging the barbed ends of the stereocilium actin filaments with the overlying plasma membrane, is dynamic compared to the shaft, and is required for stereocilium elongation.


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stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in IEA
ISO 		GO_REF:0000107
(PMID:29293958) 		Ensembl
RGD		 PMID:29293958 GO_REF:0000107 NCBI chr 2:206,910,475...207,070,537
Ensembl chr 2:206,910,475...207,091,722 		JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO 		GO_REF:0000107
(PMID:12485990), (PMID:24920589)
(PMID:17050716) 		Ensembl
RGD		 PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 NCBI chr20:28,783,124...29,165,624
Ensembl chr20:28,783,564...29,165,332 		JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in IEA
ISS
ISO 		GO_REF:0000107
GO_REF:0000024
(PMID:21368133) 		Ensembl
UniProt
RGD		 PMID:21368133 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:88,642,925...88,652,821
Ensembl chr 1:88,642,925...88,652,821 		JBrowse link
G Coro1a coronin 1A is_active_in ISO (PMID:26754646) RGD PMID:26754646 NCBI chr 1:190,726,129...190,731,133
Ensembl chr 1:190,726,130...190,731,102 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in IEA
ISO 		GO_REF:0000107
(PMID:23918390) 		Ensembl
RGD		 PMID:23918390 GO_REF:0000107 NCBI chr 4:172,119,497...172,291,670
Ensembl chr 4:172,119,497...172,218,160 		JBrowse link
G Eps8l2 EPS8 signaling adaptor L2 located_in IEA
ISO 		GO_REF:0000107
(PMID:23918390) 		Ensembl
RGD		 PMID:23918390 GO_REF:0000107 NCBI chr 1:205,875,825...205,901,109
Ensembl chr 1:205,875,801...205,901,101 		JBrowse link
G Espn espin located_in
is_active_in 		ISS
ISO 		GO_REF:0000024
(PMID:22264607), (PMID:26754646)
(PMID:26754646) 		UniProt
RGD		 PMID:22264607 PMID:26754646 GO_REF:0000024 NCBI chr 5:167,909,271...167,943,168
Ensembl chr 5:167,909,271...167,942,984 		JBrowse link
G Espnl espin-like located_in
is_active_in 		IEA
ISO 		GO_REF:0000107
(PMID:26926603)
(PMID:26754646) 		Ensembl
RGD		 PMID:26754646 PMID:26926603 GO_REF:0000107 NCBI chr 9:99,358,907...99,385,439
Ensembl chr 9:99,359,578...99,384,342 		JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:25816005) 		UniProt
Ensembl
RGD		 PMID:25816005 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:144,968,207...145,069,022
Ensembl chr 1:144,976,436...145,068,997 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in IEA
ISO 		GO_REF:0000107
(PMID:23217710) 		Ensembl
RGD		 PMID:23217710 GO_REF:0000107 NCBI chr20:6,634,058...6,644,264
Ensembl chr20:6,633,979...6,644,657 		JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in 		ISS
ISO 		GO_REF:0000024
(PMID:26754646) 		UniProt
RGD		 PMID:26754646 GO_REF:0000024 NCBI chr 1:250,837,639...250,847,943
Ensembl chr 1:250,837,643...250,848,026 		JBrowse link
G Myo3a myosin IIIA is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000117
(PMID:22264607), (PMID:26754646)
(PMID:21165622)
(PMID:26754646) 		GO_Central
UniProt
RGD		 PMID:21165622 PMID:22264607 PMID:26754646 GO_REF:0000033 GO_REF:0000117 NCBI chr17:89,451,567...89,667,654
Ensembl chr17:89,451,567...89,667,654 		JBrowse link
G Myo3b myosin IIIB is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000117
(PMID:26754646)
(PMID:22264607) 		GO_Central
UniProt
RGD		 PMID:22264607 PMID:26754646 GO_REF:0000033 GO_REF:0000117 NCBI chr 3:75,228,017...75,636,272
Ensembl chr 3:75,228,017...75,636,272 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,902,165...100,919,265
Ensembl chr10:100,901,227...100,919,579 		JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:253,837,454...253,856,919
Ensembl chr 1:253,837,459...253,855,999 		JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:31444330) 		Ensembl
RGD		 PMID:31444330 GO_REF:0000107 NCBI chr 7:77,505,063...77,679,994
Ensembl chr 7:77,505,152...77,679,994 		JBrowse link
G Strc stereocilin is_active_in
located_in 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:18849963), (PMID:21165971), (PMID:24920589), (PMID:31448880) 		GO_Central
Ensembl
RGD		 PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:128,785,817...128,811,773
Ensembl chr 3:128,789,290...128,808,023 		JBrowse link
G Tmc1 transmembrane channel-like 1 located_in IEA
ISO 		GO_REF:0000107
(PMID:22105175) 		Ensembl
RGD		 PMID:22105175 GO_REF:0000107 NCBI chr 1:227,701,781...227,872,534
Ensembl chr 1:227,701,781...227,872,534 		JBrowse link
G Tmc2 transmembrane channel-like 2 located_in IEA
ISO 		GO_REF:0000107
(PMID:22105175) 		Ensembl
RGD		 PMID:22105175 GO_REF:0000107 NCBI chr 3:137,849,513...137,917,462
Ensembl chr 3:137,849,513...137,917,462 		JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:105,831,723...105,880,082 		JBrowse link
G Whrn whirlin located_in
is_active_in 		IDA
IEA
IBA
ISO 		PMID:23055499
GO_REF:0000107
GO_REF:0000033
GO_REF:0000117
(PMID:24334608), (PMID:31448880) 		Ensembl
GO_Central
UniProt
RGD		 PMID:24334608 PMID:31448880 PMID:23055499 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:13800540 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:81,843,820...81,927,381 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      stereocilium tip 21
Path 2
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      cell projection 2903
        plasma membrane bounded cell projection 2839
          neuron projection 1650
            stereocilium 68
              stereocilium tip 21
paths to the root