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ONTOLOGY REPORT - ANNOTATIONS

Term:stereocilium bundle
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Accession:GO:0032421 term browser browse the term
Definition:A bundle of cross-linked stereocilia, arranged around a kinocilium on the apical surface of a sensory hair cell (e.g. a neuromast, auditory or vestibular hair cell). Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes.
Synonyms:exact_synonym: stereocilia bundle


show annotations for term's descendants           Sort by:
stereocilium bundle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clic5 chloride intracellular channel 5 located_in IDA PMID:17021174 MGI PMID:17021174 RGD:8554297 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Clrn2 clarin 2 located_in ISO (PMID:31448880) RGD PMID:31448880 NCBI chr14:65,656,029...65,666,325
Ensembl chr14:65,656,550...65,666,193 		JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO (PMID:16464467) RGD PMID:16464467 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISO (PMID:23918390) RGD PMID:23918390 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873 		JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (PMID:23918390) RGD PMID:23918390 NCBI chr 1:196,446,260...196,471,544
Ensembl chr 1:196,446,287...196,471,541 		JBrowse link
G Espn espin located_in ISO (PMID:20016102) RGD PMID:20016102 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:19741271)		 Ensembl
RGD		 PMID:19741271 GO_REF:0000107 NCBI chr16:67,430,654...67,442,726
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (PMID:17876667) RGD PMID:17876667 NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532 		JBrowse link
G Myo15a myosin XVA located_in ISO (PMID:20016102) RGD PMID:20016102 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340 		JBrowse link
G Myo1c myosin 1C IDA RGD PMID:12486594 RGD:1298992 NCBI chr10:60,498,372...60,520,752
Ensembl chr10:60,498,280...60,520,752 		JBrowse link
G Nherf2 NHERF family PDZ scaffold protein 2 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q located_in ISO (PMID:22357859) RGD PMID:22357859 NCBI chr 7:42,834,455...43,016,807
Ensembl chr 7:42,837,109...43,016,917 		JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 located_in ISO (PMID:15483558), (PMID:15843607) RGD PMID:15483558 PMID:15843607 NCBI chr 5:4,379,862...4,434,133
Ensembl chr 5:4,379,999...4,433,570 		JBrowse link
G Ush2a usherin located_in ISO (PMID:17360538) RGD PMID:17360538 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Whrn whirlin located_in ISO (PMID:20016102) RGD PMID:20016102 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (PMID:29293958) RGD PMID:29293958 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (PMID:25605782) RGD PMID:25605782 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Mkks MKKS centrosomal shuttling protein is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:22446187)		 GO_Central
RGD		 PMID:22446187 GO_REF:0000033 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (PMID:29293958) RGD PMID:29293958 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927 		JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO		 GO_REF:0000107
(PMID:15882574)		 Ensembl
RGD		 PMID:15882574 GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Dcdc2 doublecortin domain containing 2 located_in
is_active_in		 IDA
IBA		 PMID:25601850
GO_REF:0000033		 GO_Central PMID:25601850 GO_REF:0000033, RGD:10412291 NCBI chr17:39,845,952...40,031,781
Ensembl chr17:39,845,952...40,030,743 		JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:20137774)		 GO_Central
RGD		 PMID:20137774 GO_REF:0000033 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (PMID:18066062) RGD PMID:18066062 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Kncn kinocilin is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:15855039), (PMID:20510926)		 GO_Central
RGD		 PMID:15855039 PMID:20510926 GO_REF:0000033 NCBI chr 5:129,363,464...129,366,907
Ensembl chr 5:129,363,785...129,366,738 		JBrowse link
G Rac1 Rac family small GTPase 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Rsph9 radial spoke head component 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:14,840,115...14,852,950
Ensembl chr 9:14,840,115...14,860,062 		JBrowse link
G Strc stereocilin is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:21165971)		 GO_Central
RGD		 PMID:21165971 GO_REF:0000033 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901 		JBrowse link
stereocilia ankle link term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 located_in ISO (PMID:16775142), (PMID:20502675), (PMID:24334608), (PMID:26401052) RGD PMID:16775142 PMID:20502675 PMID:24334608 PMID:26401052 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO (PMID:24334608), (PMID:26401052), (PMID:27525485) RGD PMID:24334608 PMID:26401052 PMID:27525485 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Ush2a usherin part_of
located_in		 ISS
ISO		 GO_REF:0000024
(PMID:20502675), (PMID:24334608), (PMID:26401052)		 UniProt
RGD		 PMID:20502675 PMID:24334608 PMID:26401052 GO_REF:0000024 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Whrn whirlin located_in IDA
ISO
ISS		 PMID:23055499
(PMID:20502675), (PMID:24334608), (PMID:26401052)
GO_REF:0000024		 RGD
UniProt		 PMID:20502675 PMID:24334608 PMID:26401052 PMID:23055499 GO_REF:0000024, RGD:13800540 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
stereocilia ankle link complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 part_of ISO (PMID:17567809) RGD PMID:17567809 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Pdzd7 PDZ domain containing 7 part_of IBA
ISO		 GO_REF:0000033
(PMID:27525485)		 GO_Central
RGD		 PMID:27525485 GO_REF:0000033 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Ush1c USH1 protein network component harmonin part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush2a usherin part_of ISS
ISO
IEA		 GO_REF:0000024
(PMID:17567809)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17567809 GO_REF:0000024 GO_REF:0000107 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein part_of ISS
ISO		 GO_REF:0000024
(PMID:17567809)		 UniProt
RGD		 PMID:17567809 GO_REF:0000024 NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356 		JBrowse link
G Whrn whirlin part_of ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:17567809)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:17567809 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
stereocilia tip-link density term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Diaph3 diaphanous-related formin 3 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:23441200)		 Ensembl
RGD		 PMID:23441200 GO_REF:0000107 NCBI chr15:62,543,375...63,013,060
Ensembl chr15:62,543,375...63,012,975 		JBrowse link
stereocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 is_active_in IDA
ISO
IBA		 (PMID:26754646)
GO_REF:0000033		 RGD
GO_Central		 PMID:26754646 PMID:16301216 GO_REF:0000033, RGD:8548636 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Ankrd24 ankyrin repeat domain 24 located_in ISO (PMID:35175278) RGD PMID:35175278 NCBI chr 7:8,061,634...8,081,142
Ensembl chr 7:8,061,953...8,081,142 		JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 located_in IEA
ISO		 GO_REF:0000107
(PMID:19478059)		 Ensembl
RGD		 PMID:19478059 GO_REF:0000107 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in ISO (PMID:25605782) RGD PMID:25605782 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Calb1 calbindin 1 IDA RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
G Calb2 calbindin 2 IDA RGD PMID:16120789 RGD:7175527 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438 		JBrowse link
G Cdh23 cadherin-related 23 located_in ISO (PMID:12485990), (PMID:15882574), (PMID:16481439), (PMID:17050716) RGD PMID:12485990 PMID:15882574 PMID:16481439 PMID:17050716 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:26173970), (PMID:26426422)
(PMID:23023331)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:23023331 PMID:26173970 PMID:26426422 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Clic5 chloride intracellular channel 5 located_in ISO (PMID:17021174) RGD PMID:17021174 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Clrn1 clarin 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:19539019)		 Ensembl
RGD		 PMID:19539019 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO (PMID:16464467) RGD PMID:16464467 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855 		JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISS
ISO		 GO_REF:0000024
(PMID:21236676), (PMID:24741995)		 UniProt
RGD		 PMID:21236676 PMID:24741995 GO_REF:0000024 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873 		JBrowse link
G Espn espin located_in ISO
IEA		 (PMID:29572253)
(PMID:20510926)
GO_REF:0000044		 RGD
UniProt		 PMID:20510926 PMID:29572253 GO_REF:0000044 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256 		JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal located_in ISO (PMID:20660251) RGD PMID:20660251 NCBI chr10:105,634,783...105,641,322
Ensembl chr10:105,634,783...105,641,322 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:20137774), (PMID:30380417)		 GO_Central
RGD		 PMID:20137774 PMID:30380417 GO_REF:0000033 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (PMID:25605782) RGD PMID:25605782 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Loxhd1 lipoxygenase homology PLAT domains 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:19732867)		 GO_Central
RGD		 PMID:19732867 GO_REF:0000033 NCBI chr18:70,817,962...70,970,606
Ensembl chr18:70,818,276...70,969,983 		JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 is_active_in ISO (PMID:35727972) RGD PMID:35727972 NCBI chr18:52,539,714...52,554,465
Ensembl chr18:52,539,917...52,554,461 		JBrowse link
G Myo15a myosin XVA located_in ISO (PMID:20016102) RGD PMID:20016102 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340 		JBrowse link
G Myo1c myosin 1C located_in ISO (PMID:17050716) RGD PMID:17050716 NCBI chr10:60,498,372...60,520,752
Ensembl chr10:60,498,280...60,520,752 		JBrowse link
G Myo7a myosin VIIA is_active_in
located_in		 ISO (PMID:26754646)
(PMID:12485990), (PMID:16481439), (PMID:20016102), (PMID:27525485)		 RGD PMID:12485990 PMID:16481439 PMID:20016102 PMID:26754646 PMID:27525485 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598 		JBrowse link
G Nherf2 NHERF family PDZ scaffold protein 2 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049 		JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in ISO (PMID:23533177) RGD PMID:23533177 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pcdh15 protocadherin related 15 is_active_in
located_in		 ISO (PMID:26754646)
(PMID:14570705)		 RGD PMID:14570705 PMID:26754646 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO (PMID:27525485), (PMID:31448880) RGD PMID:27525485 PMID:31448880 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:38228630)		 UniProt
RGD		 PMID:38228630 GO_REF:0000024 NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501 		JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 located_in ISO (PMID:38228630) RGD PMID:38228630 NCBI chr18:56,468,449...56,844,984
Ensembl chr18:56,469,680...56,844,216 		JBrowse link
G Pls1 plastin 1 located_in ISO (PMID:25124451) RGD PMID:25124451 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
G Pls3 plastin 3 IDA RGD PMID:12378542 RGD:731234 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:15316084) RGD PMID:15316084 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:109,772,939...109,787,954
Ensembl chr 7:109,772,593...109,784,561 		JBrowse link
G Rdx radixin located_in ISO (PMID:17021174) RGD PMID:17021174 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678 		JBrowse link
G Rhoc ras homolog family member C located_in ISO (PMID:27269051) RGD PMID:27269051 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA
ISO		 PMID:24958875
(PMID:27269051)		 RGD PMID:27269051 PMID:24958875 RGD:10047244 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 IDA RGD PMID:16301216 RGD:8548636 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
G Stx4 syntaxin 4 located_in ISS
ISO		 GO_REF:0000024
(PMID:36355422)		 UniProt
RGD		 PMID:36355422 GO_REF:0000024 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979 		JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO (PMID:38228630) RGD PMID:38228630 NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955 		JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO (PMID:38228630) RGD PMID:38228630 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336 		JBrowse link
G Tprn taperin located_in ISS
ISO		 GO_REF:0000024
(PMID:20170899), (PMID:27269051)		 UniProt
RGD		 PMID:20170899 PMID:27269051 GO_REF:0000024 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642 		JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats located_in ISO (PMID:22678063) RGD PMID:22678063 NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914 		JBrowse link
G Twf2 twinfilin actin-binding protein 2 located_in ISO (PMID:19955359) RGD PMID:19955359 NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in
is_active_in		 IDA
ISO		 (PMID:12485990), (PMID:20016102)
(PMID:26754646)		 RGD PMID:12485990 PMID:20016102 PMID:26754646 PMID:16301216 RGD:8548636 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush2a usherin IDA hair cell RGD PMID:16301216 RGD:8548636 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Whrn whirlin located_in IDA
ISO
ISS		 (PMID:15590698), (PMID:15590699), (PMID:15654330)
GO_REF:0000024		 RGD
UniProt		 PMID:15590698 PMID:15590699 PMID:15654330 PMID:16434480 GO_REF:0000024, RGD:1600128 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 located_in ISO (PMID:25105228) RGD PMID:25105228 NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924 		JBrowse link
stereocilium base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clic5 chloride intracellular channel 5 located_in IDA
ISO		 PMID:24285636
(PMID:37952086)		 RGD PMID:37952086 PMID:24285636 RGD:401966878 NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:30380417)		 GO_Central
RGD		 PMID:30380417 GO_REF:0000033 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094 		JBrowse link
G Myo7a myosin VIIA located_in ISO (PMID:17567809) RGD PMID:17567809 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Pjvk pejvakin located_in ISO (PMID:28209736) RGD PMID:28209736 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045 		JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q located_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:24285636), (PMID:37952086)		 Ensembl
UniProt
RGD		 PMID:24285636 PMID:37952086 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:42,834,455...43,016,807
Ensembl chr 7:42,837,109...43,016,917 		JBrowse link
G Rdx radixin located_in ISO (PMID:24285636), (PMID:30159668) RGD PMID:24285636 PMID:30159668 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678 		JBrowse link
G Tprn taperin is_active_in
located_in		 IBA
ISO
ISS		 GO_REF:0000033
(PMID:24285636), (PMID:28209736), (PMID:30159668), (PMID:30380417), (PMID:37952086)
GO_REF:0000024		 GO_Central
RGD
UniProt		 PMID:24285636 PMID:28209736 PMID:30159668 PMID:30380417 PMID:37952086 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642 		JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (PMID:28209736) RGD PMID:28209736 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474 		JBrowse link
stereocilium coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkhd1l1 PKHD1 like 1 located_in ISO (PMID:31444330) RGD PMID:31444330 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335 		JBrowse link
stereocilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B ISO RGD (All species) (All species) NCBI chr 3:7,380,892...7,546,104
Ensembl chr 3:7,380,922...7,546,091 		JBrowse link
G Myo1c myosin 1C located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:60,498,372...60,520,752
Ensembl chr10:60,498,280...60,520,752 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA
IEA		 PMID:24958875
GO_REF:0000044		 UniProt PMID:24958875 GO_REF:0000044, RGD:10047244 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Ush2a usherin located_in IEA
ISO		 GO_REF:0000107
(PMID:16301217)		 Ensembl
RGD		 PMID:16301217 GO_REF:0000107 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356 		JBrowse link
stereocilium shaft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fchsd2 FCH and double SH3 domains 2 located_in ISO (PMID:23437151) RGD PMID:23437151 NCBI chr 1:155,444,471...155,685,350
Ensembl chr 1:155,444,460...155,685,539 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:30380417)		 GO_Central
RGD		 PMID:30380417 GO_REF:0000033 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094 		JBrowse link
stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (PMID:29293958) RGD PMID:29293958 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927 		JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO		 GO_REF:0000107
(PMID:12485990), (PMID:17050716), (PMID:24920589)		 Ensembl
RGD		 PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:21368133)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21368133 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:79,514,975...79,524,871
Ensembl chr 1:79,514,975...79,524,871 		JBrowse link
G Coro1a coronin 1A is_active_in ISO (PMID:26754646) RGD PMID:26754646 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in IEA
ISO		 GO_REF:0000107
(PMID:23918390)		 Ensembl
RGD		 PMID:23918390 GO_REF:0000107 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873 		JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (PMID:23918390) RGD PMID:23918390 NCBI chr 1:196,446,260...196,471,544
Ensembl chr 1:196,446,287...196,471,541 		JBrowse link
G Espn espin located_in
is_active_in		 ISS
ISO		 GO_REF:0000024
(PMID:22264607), (PMID:26754646)
(PMID:26754646)		 UniProt
RGD		 PMID:22264607 PMID:26754646 GO_REF:0000024 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256 		JBrowse link
G Espnl espin-like is_active_in
located_in		 ISO (PMID:26754646)
(PMID:26926603)		 RGD PMID:26754646 PMID:26926603 NCBI chr 9:91,912,038...91,936,803
Ensembl chr 9:91,912,049...91,935,292 		JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25816005)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25816005 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (PMID:23217710) RGD PMID:23217710 NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532 		JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in		 ISS
ISO		 GO_REF:0000024
(PMID:26754646)		 UniProt
RGD		 PMID:26754646 GO_REF:0000024 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716 		JBrowse link
G Myo3a myosin IIIA is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:21165622), (PMID:22264607), (PMID:26754646)
(PMID:26754646)		 GO_Central
RGD		 PMID:21165622 PMID:22264607 PMID:26754646 GO_REF:0000033 NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042 		JBrowse link
G Myo3b myosin IIIB is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:22264607), (PMID:26754646)
(PMID:26754646)		 GO_Central
RGD		 PMID:22264607 PMID:26754646 GO_REF:0000033 NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) RGD PMID:24920589 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598 		JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839 		JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO (PMID:31444330) RGD PMID:31444330 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335 		JBrowse link
G Strc stereocilin is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18849963), (PMID:21165971), (PMID:24920589), (PMID:31448880)		 GO_Central
RGD		 PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 GO_REF:0000033 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134 		JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO (PMID:22105175) RGD PMID:22105175 NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955 		JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO (PMID:22105175) RGD PMID:22105175 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336 		JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Whrn whirlin located_in
is_active_in		 IDA
ISO
IBA
IEA		 PMID:23055499
(PMID:24334608), (PMID:31448880)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:24334608 PMID:31448880 PMID:23055499 GO_REF:0000033 GO_REF:0000107, RGD:13800540 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
upper tip-link density term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA IDA RGD PMID:21709241 RGD:8699498 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO (PMID:31448880) RGD PMID:31448880 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20832
    cellular anatomical structure 20632
      cluster of actin-based cell projections 216
        stereocilium bundle 79
          kinocilium + 13
          stereocilia coupling link + 8
          stereocilium + 68
paths to the root