ONTOLOGY REPORT - ANNOTATIONS
Term: stereocilium
Accession: GO:0032420
browse the term
Definition: An actin-based protrusion from the apical surface of auditory and vestibular hair cells and of neuromast cells. These protrusions are supported by a bundle of cross-linked actin filaments (an actin cable), oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex which bridges to the plasma. Bundles of stereocilia act as mechanosensory organelles.
Synonyms: never_in_taxon: NCBITaxon:4751 ! Fungi
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Adcy6
adenylate cyclase 6
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754
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Adgrv1
adhesion G protein-coupled receptor V1
is_active_in
IDA ISO IBA
(PMID:26754646) GO_REF:0000033
RGD GO_Central
PMID:26754646 PMID:16301216
GO_REF:0000033, RGD:8548636
NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
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Ankrd24
ankyrin repeat domain 24
located_in
ISO
(PMID:35175278)
RGD
PMID:35175278
NCBI chr 7:8,061,634...8,081,142
Ensembl chr 7:8,061,953...8,081,142
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Atp8b1
ATPase phospholipid transporting 8B1
located_in
IEA ISO
GO_REF:0000107 (PMID:19478059)
Ensembl RGD
PMID:19478059
GO_REF:0000107
NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
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Bbs2
Bardet-Biedl syndrome 2
located_in
ISO
(PMID:25605782)
RGD
PMID:25605782
NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
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Calb1
calbindin 1
IDA
RGD
PMID:16120789
RGD:7175527
NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
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Calb2
calbindin 2
IDA
RGD
PMID:16120789
RGD:7175527
NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438
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Cdh23
cadherin-related 23
located_in
ISO
(PMID:12485990), (PMID:15882574), (PMID:16481439), (PMID:17050716)
RGD
PMID:12485990 PMID:15882574 PMID:16481439 PMID:17050716
NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
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Cib2
calcium and integrin binding family member 2
located_in is_active_in
ISO IBA ISS
(PMID:26173970), (PMID:26426422) (PMID:23023331) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:23023331 PMID:26173970 PMID:26426422
GO_REF:0000024 GO_REF:0000033
NCBI chr 8:54,930,265...54,947,157
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Clic5
chloride intracellular channel 5
located_in
ISO
(PMID:17021174)
RGD
PMID:17021174
NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427
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Clrn1
clarin 1
located_in
IEA ISO
GO_REF:0000107 (PMID:19539019)
Ensembl RGD
PMID:19539019
GO_REF:0000107
NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
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Dock4
dedicator of cytokinesis 4
located_in
ISO
(PMID:16464467)
RGD
PMID:16464467
NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
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Elmod3
ELMO domain containing 3
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053
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Eps8
EGFR pathway substrate 8, signaling adaptor
located_in
ISS ISO
GO_REF:0000024 (PMID:21236676), (PMID:24741995)
UniProt RGD
PMID:21236676 PMID:24741995
GO_REF:0000024
NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
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Espn
espin
located_in
ISO IEA
(PMID:29572253) (PMID:20510926) GO_REF:0000044
RGD UniProt
PMID:20510926 PMID:29572253
GO_REF:0000044
NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
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Fscn2
fascin actin-bundling protein 2, retinal
located_in
ISO
(PMID:20660251)
RGD
PMID:20660251
NCBI chr10:105,634,783...105,641,322
Ensembl chr10:105,634,783...105,641,322
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Grxcr1
glutaredoxin and cysteine rich domain containing 1
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:20137774), (PMID:30380417)
GO_Central RGD
PMID:20137774 PMID:30380417
GO_REF:0000033
NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
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Ift20
intraflagellar transport 20
located_in
ISO
(PMID:25605782)
RGD
PMID:25605782
NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
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Loxhd1
lipoxygenase homology PLAT domains 1
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:19732867)
GO_Central RGD
PMID:19732867
GO_REF:0000033
NCBI chr18:70,817,962...70,970,606
Ensembl chr18:70,818,276...70,969,983
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Minar2
membrane integral NOTCH2 associated receptor 2
is_active_in
ISO
(PMID:35727972)
RGD
PMID:35727972
NCBI chr18:52,539,714...52,554,465
Ensembl chr18:52,539,917...52,554,461
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Myo15a
myosin XVA
located_in
ISO
(PMID:20016102)
RGD
PMID:20016102
NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340
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Myo1c
myosin 1C
located_in
ISO
(PMID:17050716)
RGD
PMID:17050716
NCBI chr10:60,498,372...60,520,752
Ensembl chr10:60,498,280...60,520,752
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Myo7a
myosin VIIA
is_active_in located_in
ISO
(PMID:26754646) (PMID:12485990), (PMID:16481439), (PMID:20016102), (PMID:27525485)
RGD
PMID:12485990 PMID:16481439 PMID:20016102 PMID:26754646 PMID:27525485
NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
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Nherf1
NHERF family PDZ scaffold protein 1
located_in
ISO
(PMID:24920589)
RGD
PMID:24920589
NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
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Nherf2
NHERF family PDZ scaffold protein 2
located_in
ISO
(PMID:24920589)
RGD
PMID:24920589
NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049
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Ocm
oncomodulin
IDA
RGD
PMID:16120789
RGD:7175527
NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
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Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
located_in
ISO
(PMID:23533177)
RGD
PMID:23533177
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
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Pcdh15
protocadherin related 15
is_active_in located_in
ISO
(PMID:26754646) (PMID:14570705)
RGD
PMID:14570705 PMID:26754646
NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
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Pdzd7
PDZ domain containing 7
located_in
ISO
(PMID:27525485), (PMID:31448880)
RGD
PMID:27525485 PMID:31448880
NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
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Piezo1
piezo-type mechanosensitive ion channel component 1
located_in
ISS ISO
GO_REF:0000024 (PMID:38228630)
UniProt RGD
PMID:38228630
GO_REF:0000024
NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501
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Piezo2
piezo-type mechanosensitive ion channel component 2
located_in
ISO
(PMID:38228630)
RGD
PMID:38228630
NCBI chr18:56,468,449...56,844,984
Ensembl chr18:56,469,680...56,844,216
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Pls1
plastin 1
located_in
ISO
(PMID:25124451)
RGD
PMID:25124451
NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
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Pls3
plastin 3
IDA
RGD
PMID:12378542
RGD:731234
NCBI chr X:111,589,193...111,683,908
Ensembl chr X:111,589,254...111,683,891
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Prom1
prominin 1
located_in
ISO
(PMID:15316084)
RGD
PMID:15316084
NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
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Pvalb
parvalbumin
IDA
RGD
PMID:16120789
RGD:7175527
NCBI chr 7:109,772,939...109,787,954
Ensembl chr 7:109,772,593...109,784,561
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Rdx
radixin
located_in
ISO
(PMID:17021174)
RGD
PMID:17021174
NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
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Rhoc
ras homolog family member C
located_in
ISO
(PMID:27269051)
RGD
PMID:27269051
NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
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Ripor2
RHO family interacting cell polarization regulator 2
located_in
IDA ISO
PMID:24958875 (PMID:27269051)
RGD
PMID:27269051 PMID:24958875
RGD:10047244
NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092
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Slc4a7
solute carrier family 4 member 7
IDA
RGD
PMID:16301216
RGD:8548636
NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781
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Stx4
syntaxin 4
located_in
ISS ISO
GO_REF:0000024 (PMID:36355422)
UniProt RGD
PMID:36355422
GO_REF:0000024
NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
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Tmc1
transmembrane channel-like 1
located_in
ISO
(PMID:38228630)
RGD
PMID:38228630
NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955
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Tmc2
transmembrane channel-like 2
located_in
ISO
(PMID:38228630)
RGD
PMID:38228630
NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
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Tprn
taperin
located_in
ISS ISO
GO_REF:0000024 (PMID:20170899), (PMID:27269051)
UniProt RGD
PMID:20170899 PMID:27269051
GO_REF:0000024
NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
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Tspear
thrombospondin-type laminin G domain and EAR repeats
located_in
ISO
(PMID:22678063)
RGD
PMID:22678063
NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914
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Twf2
twinfilin actin-binding protein 2
located_in
ISO
(PMID:19955359)
RGD
PMID:19955359
NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
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Ush1c
USH1 protein network component harmonin
located_in is_active_in
IDA ISO
(PMID:12485990), (PMID:20016102) (PMID:26754646)
RGD
PMID:12485990 PMID:20016102 PMID:26754646 PMID:16301216
RGD:8548636
NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
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Ush2a
usherin
IDA
hair cell
RGD
PMID:16301216
RGD:8548636
NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
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Whrn
whirlin
located_in
IDA ISO ISS
(PMID:15590698), (PMID:15590699), (PMID:15654330) GO_REF:0000024
RGD UniProt
PMID:15590698 PMID:15590699 PMID:15654330 PMID:16434480
GO_REF:0000024, RGD:1600128
NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
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Zswim6
zinc finger, SWIM-type containing 6
located_in
ISO
(PMID:25105228)
RGD
PMID:25105228
NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924
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Clic5
chloride intracellular channel 5
located_in
IDA ISO
PMID:24285636 (PMID:37952086)
RGD
PMID:37952086 PMID:24285636
RGD:401966878
NCBI chr 9:16,710,980...16,813,502
Ensembl chr 9:16,710,980...16,813,427
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Grxcr2
glutaredoxin and cysteine rich domain containing 2
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:30380417)
GO_Central RGD
PMID:30380417
GO_REF:0000033
NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
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Myo7a
myosin VIIA
located_in
ISO
(PMID:17567809)
RGD
PMID:17567809
NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
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Pjvk
pejvakin
located_in
ISO
(PMID:28209736)
RGD
PMID:28209736
NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
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Ptprq
protein tyrosine phosphatase, receptor type, Q
located_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:24285636), (PMID:37952086)
Ensembl UniProt RGD
PMID:24285636 PMID:37952086
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:42,834,455...43,016,807
Ensembl chr 7:42,837,109...43,016,917
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Rdx
radixin
located_in
ISO
(PMID:24285636), (PMID:30159668)
RGD
PMID:24285636 PMID:30159668
NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
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Tprn
taperin
is_active_in located_in
IBA ISO ISS
GO_REF:0000033 (PMID:24285636), (PMID:28209736), (PMID:30159668), (PMID:30380417), (PMID:37952086) GO_REF:0000024
GO_Central RGD UniProt
PMID:24285636 PMID:28209736 PMID:30159668 PMID:30380417 PMID:37952086
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
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Triobp
TRIO and F-actin binding protein
located_in
ISO
(PMID:28209736)
RGD
PMID:28209736
NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
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Pkhd1l1
PKHD1 like 1
located_in
ISO
(PMID:31444330)
RGD
PMID:31444330
NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
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Cacna1b
calcium voltage-gated channel subunit alpha1 B
ISO
RGD
(All species) (All species)
NCBI chr 3:7,380,892...7,546,104
Ensembl chr 3:7,380,922...7,546,091
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Myo1c
myosin 1C
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr10:60,498,372...60,520,752
Ensembl chr10:60,498,280...60,520,752
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Ripor2
RHO family interacting cell polarization regulator 2
located_in
IDA IEA
PMID:24958875 GO_REF:0000044
UniProt
PMID:24958875
GO_REF:0000044, RGD:10047244
NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092
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Ush2a
usherin
located_in
IEA ISO
GO_REF:0000107 (PMID:16301217)
Ensembl RGD
PMID:16301217
GO_REF:0000107
NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
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Vezt
vezatin, adherens junctions transmembrane protein
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356
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Fchsd2
FCH and double SH3 domains 2
located_in
ISO
(PMID:23437151)
RGD
PMID:23437151
NCBI chr 1:155,444,471...155,685,350
Ensembl chr 1:155,444,460...155,685,539
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Grxcr2
glutaredoxin and cysteine rich domain containing 2
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:30380417)
GO_Central RGD
PMID:30380417
GO_REF:0000033
NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
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Cdc14a
cell division cycle 14A
located_in
ISO
(PMID:29293958)
RGD
PMID:29293958
NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
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Cdh23
cadherin-related 23
located_in
IEA ISO
GO_REF:0000107 (PMID:12485990), (PMID:17050716), (PMID:24920589)
Ensembl RGD
PMID:12485990 PMID:17050716 PMID:24920589
GO_REF:0000107
NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
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Ceacam16
CEA cell adhesion molecule 16, tectorial membrane component
located_in
IEA ISO ISS
GO_REF:0000107 (PMID:21368133) GO_REF:0000024
Ensembl RGD UniProt
PMID:21368133
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:79,514,975...79,524,871
Ensembl chr 1:79,514,975...79,524,871
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Coro1a
coronin 1A
is_active_in
ISO
(PMID:26754646)
RGD
PMID:26754646
NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
G
Eps8
EGFR pathway substrate 8, signaling adaptor
located_in
IEA ISO
GO_REF:0000107 (PMID:23918390)
Ensembl RGD
PMID:23918390
GO_REF:0000107
NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
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Eps8l2
EPS8-like 2
located_in
ISO
(PMID:23918390)
RGD
PMID:23918390
NCBI chr 1:196,446,260...196,471,544
Ensembl chr 1:196,446,287...196,471,541
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Espn
espin
located_in is_active_in
ISS ISO
GO_REF:0000024 (PMID:22264607), (PMID:26754646) (PMID:26754646)
UniProt RGD
PMID:22264607 PMID:26754646
GO_REF:0000024
NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
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Espnl
espin-like
is_active_in located_in
ISO
(PMID:26754646) (PMID:26926603)
RGD
PMID:26754646 PMID:26926603
NCBI chr 9:91,912,038...91,936,803
Ensembl chr 9:91,912,049...91,935,292
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Homer2
homer scaffold protein 2
located_in
ISS ISO IEA
GO_REF:0000024 (PMID:25816005) GO_REF:0000107
UniProt RGD Ensembl
PMID:25816005
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772
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Lhfpl5
LHFPL tetraspan subfamily member 5
located_in
ISO
(PMID:23217710)
RGD
PMID:23217710
NCBI chr20:6,632,324...6,642,534
Ensembl chr20:6,632,362...6,642,532
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Morn4
MORN repeat containing 4
located_in is_active_in
ISS ISO
GO_REF:0000024 (PMID:26754646)
UniProt RGD
PMID:26754646
GO_REF:0000024
NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
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Myo3a
myosin IIIA
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:21165622), (PMID:22264607), (PMID:26754646) (PMID:26754646)
GO_Central RGD
PMID:21165622 PMID:22264607 PMID:26754646
GO_REF:0000033
NCBI chr17:84,543,465...84,759,562
Ensembl chr17:84,543,552...84,759,042
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Myo3b
myosin IIIB
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:22264607), (PMID:26754646) (PMID:26754646)
GO_Central RGD
PMID:22264607 PMID:26754646
GO_REF:0000033
NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373
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Nherf1
NHERF family PDZ scaffold protein 1
located_in
ISO
(PMID:24920589)
RGD
PMID:24920589
NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
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Pdzd7
PDZ domain containing 7
is_active_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
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Pkhd1l1
PKHD1 like 1
located_in
ISO
(PMID:31444330)
RGD
PMID:31444330
NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
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Strc
stereocilin
is_active_in located_in
IBA ISO
GO_REF:0000033 (PMID:18849963), (PMID:21165971), (PMID:24920589), (PMID:31448880)
GO_Central RGD
PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880
GO_REF:0000033
NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
G
Tmc1
transmembrane channel-like 1
located_in
ISO
(PMID:22105175)
RGD
PMID:22105175
NCBI chr 1:218,275,249...218,446,013
Ensembl chr 1:218,276,417...218,445,955
G
Tmc2
transmembrane channel-like 2
located_in
ISO
(PMID:22105175)
RGD
PMID:22105175
NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
G
Ush1c
USH1 protein network component harmonin
is_active_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
G
Whrn
whirlin
located_in is_active_in
IDA ISO IBA IEA
PMID:23055499 (PMID:24334608), (PMID:31448880) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:24334608 PMID:31448880 PMID:23055499
GO_REF:0000033 GO_REF:0000107, RGD:13800540
NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all