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ONTOLOGY REPORT - ANNOTATIONS

Term:stereocilium
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Accession:GO:0032420 term browser browse the term
Definition:An actin-based protrusion from the apical surface of auditory and vestibular hair cells and of neuromast cells. These protrusions are supported by a bundle of cross-linked actin filaments (an actin cable), oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex which bridges to the plasma. Bundles of stereocilia act as mechanosensory organelles.
Synonyms:never_in_taxon: NCBITaxon:4751 ! Fungi

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stereocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 is_active_in ISO (PMID:26754646) RGD
MGI		 PMID:16301216 PMID:26754646 RGD:8548636 NCBI chrNW_004955418:20,603,323...21,039,891 JBrowse link
G Ankrd24 ankyrin repeat domain 24 located_in ISO (PMID:35175278) UniProt PMID:35175278 NCBI chrNW_004955495:4,621,059...4,636,235 JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 located_in ISO (PMID:19478059) UniProt PMID:19478059 NCBI chrNW_004955402:41,994,993...42,113,380
Ensembl chrNW_004955402:41,996,001...42,113,895 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in ISO (PMID:25605782) MGI PMID:25605782 NCBI chrNW_004955433:14,266,190...14,321,780
Ensembl chrNW_004955433:14,266,190...14,296,929 		JBrowse link
G Calb1 calbindin 1 ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502 		JBrowse link
G Calb2 calbindin 2 ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955484:4,075,103...4,103,509
Ensembl chrNW_004955484:4,075,067...4,103,559 		JBrowse link
G Cdh23 cadherin related 23 located_in ISO (PMID:12485990), (PMID:15882574), (PMID:16481439), (PMID:17050716) HGNC-UCL PMID:12485990 PMID:15882574 PMID:16481439 PMID:17050716 NCBI chrNW_004955437:19,683,792...20,044,718
Ensembl chrNW_004955437:19,684,473...20,003,819 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO (PMID:26173970), (PMID:26426422)
(PMID:23023331)		 UniProt PMID:23023331 PMID:26173970 PMID:26426422 NCBI chrNW_004955450:660,655...674,726
Ensembl chrNW_004955450:659,383...675,634 		JBrowse link
G Clic5 chloride intracellular channel 5 located_in ISO (PMID:17021174) MGI PMID:17021174 NCBI chrNW_004955437:11,053,885...11,118,150
Ensembl chrNW_004955437:11,053,885...11,118,255 		JBrowse link
G Clrn1 clarin 1 located_in ISO (PMID:19539019) MGI PMID:19539019 NCBI chrNW_004955448:2,062,647...2,106,548
Ensembl chrNW_004955448:2,062,647...2,106,548 		JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO (PMID:16464467) HGNC-UCL PMID:16464467 NCBI chrNW_004955410:15,548,041...15,835,382
Ensembl chrNW_004955410:15,550,235...15,777,103 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISO (PMID:21236676), (PMID:24741995) UniProt PMID:21236676 PMID:24741995 NCBI chrNW_004955413:12,267,701...12,386,088
Ensembl chrNW_004955413:12,266,371...12,386,088 		JBrowse link
G Espn espin located_in ISO (PMID:29572253)
(PMID:20510926)		 UniProt
MGI		 PMID:20510926 PMID:29572253 NCBI chrNW_004955486:6,130,190...6,156,859 JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal located_in ISO (PMID:20660251) UniProt PMID:20660251 NCBI chrNW_004955506:1,526,830...1,533,775
Ensembl chrNW_004955506:1,526,830...1,533,775 		JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 located_in ISO (PMID:20137774), (PMID:30380417) MGI PMID:20137774 PMID:30380417 NCBI chrNW_004955443:4,799,056...4,908,749
Ensembl chrNW_004955443:4,799,056...4,908,767 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (PMID:25605782) MGI PMID:25605782 NCBI chrNW_004955481:4,799,548...4,807,751
Ensembl chrNW_004955481:4,799,548...4,807,751 		JBrowse link
G Loxhd1 lipoxygenase homology PLAT domains 1 located_in ISO (PMID:19732867) UniProt PMID:19732867 NCBI chrNW_004955402:31,985,616...32,144,040
Ensembl chrNW_004955402:31,985,583...32,144,040 		JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 is_active_in ISO (PMID:35727972) MGI PMID:35727972 NCBI chrNW_004955415:2,627,047...2,644,602
Ensembl chrNW_004955415:2,626,926...2,644,610 		JBrowse link
G Myo15a myosin XVA located_in ISO (PMID:20016102) MGI PMID:20016102 NCBI chrNW_004955478:11,131,908...11,186,465
Ensembl chrNW_004955478:11,132,719...11,186,378 		JBrowse link
G Myo1c myosin IC located_in ISO (PMID:17050716) MGI PMID:17050716 NCBI chrNW_004955481:1,676,788...1,701,421
Ensembl chrNW_004955481:1,676,728...1,703,488 		JBrowse link
G Myo7a myosin VIIA is_active_in
located_in		 ISO (PMID:26754646)
(PMID:12485990), (PMID:16481439), (PMID:20016102), (PMID:27525485)		 MGI PMID:12485990 PMID:16481439 PMID:20016102 PMID:26754646 PMID:27525485 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) MGI PMID:24920589 NCBI chrNW_004955553:1,639,267...1,656,850
Ensembl chrNW_004955553:1,639,267...1,656,850 		JBrowse link
G Nherf2 NHERF family PDZ scaffold protein 2 located_in ISO (PMID:24920589) MGI PMID:24920589 NCBI chrNW_004955442:15,224,214...15,235,372
Ensembl chrNW_004955442:15,224,214...15,235,379 		JBrowse link
G Ocm oncomodulin ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955460:13,876,279...13,880,643 JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 located_in ISO (PMID:23533177) MGI PMID:23533177 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452 		JBrowse link
G Pcdh15 protocadherin related 15 is_active_in
located_in		 ISO (PMID:26754646)
(PMID:14570705)		 MGI
HGNC-UCL		 PMID:14570705 PMID:26754646 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028 		JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO (PMID:27525485), (PMID:31448880) UniProt PMID:27525485 PMID:31448880 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427 		JBrowse link
G Piezo1 piezo type mechanosensitive ion channel component 1 (Er blood group) located_in ISO (PMID:38228630) UniProt PMID:38228630 NCBI chrNW_004955541:2,618,167...2,655,349
Ensembl chrNW_004955541:2,618,438...2,643,771 		JBrowse link
G Piezo2 piezo type mechanosensitive ion channel component 2 located_in ISO (PMID:38228630) UniProt PMID:38228630 NCBI chrNW_004955402:1,534,619...1,873,143
Ensembl chrNW_004955402:1,650,726...1,871,876 		JBrowse link
G Pls1 plastin 1 located_in ISO (PMID:25124451) UniProt PMID:25124451 NCBI chrNW_004955508:3,215,304...3,324,240
Ensembl chrNW_004955508:3,213,646...3,260,554 		JBrowse link
G Pls3 plastin 3 ISO RGD PMID:12378542 RGD:731234 NCBI chrNW_004955490:125,913...221,152
Ensembl chrNW_004955490:122,328...221,388 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:15316084) MGI PMID:15316084 NCBI chrNW_004955480:7,955,501...8,059,537
Ensembl chrNW_004955480:7,961,389...8,059,589 		JBrowse link
G Pvalb parvalbumin ISO RGD PMID:16120789 RGD:7175527 NCBI chrNW_004955413:23,329,467...23,345,487
Ensembl chrNW_004955413:23,329,467...23,345,487 		JBrowse link
G Rdx radixin located_in ISO (PMID:17021174) MGI PMID:17021174 NCBI chrNW_004955412:12,100,436...12,184,444
Ensembl chrNW_004955412:12,100,359...12,172,545 		JBrowse link
G Rhoc ras homolog family member C located_in ISO (PMID:27269051) UniProt PMID:27269051 NCBI chrNW_004955435:16,115,095...16,117,736
Ensembl chrNW_004955435:16,115,095...16,117,869 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in ISO PMID:24958875
(PMID:27269051)		 UniProt PMID:24958875 PMID:27269051 RGD:10047244 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO RGD PMID:16301216 RGD:8548636 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754 		JBrowse link
G Tmc1 transmembrane channel like 1 located_in ISO (PMID:38228630) UniProt PMID:38228630 NCBI chrNW_004955434:398,734...500,378
Ensembl chrNW_004955434:398,829...529,810 		JBrowse link
G Tmc2 transmembrane channel like 2 located_in ISO (PMID:38228630) UniProt PMID:38228630 NCBI chrNW_004955415:13,545,266...13,626,125
Ensembl chrNW_004955415:13,565,935...13,625,843 		JBrowse link
G Tprn taperin located_in ISO (PMID:20170899), (PMID:27269051) UniProt PMID:20170899 PMID:27269051 NCBI chrNW_004955513:5,196,871...5,205,945
Ensembl chrNW_004955513:5,197,280...5,203,445 		JBrowse link
G Tspear thrombospondin type laminin G domain and EAR repeats located_in ISO (PMID:22678063) UniProt PMID:22678063 NCBI chrNW_004955407:41,513,538...41,566,931
Ensembl chrNW_004955407:41,513,829...41,656,564 		JBrowse link
G Twf2 twinfilin actin binding protein 2 located_in ISO (PMID:19955359) BHF-UCL PMID:19955359 NCBI chrNW_004955532:3,835,620...3,844,760
Ensembl chrNW_004955532:3,834,579...3,844,760 		JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in
located_in		 ISO (PMID:26754646)
(PMID:12485990), (PMID:20016102)		 RGD
MGI		 PMID:12485990 PMID:16301216 PMID:20016102 PMID:26754646 RGD:8548636 NCBI chrNW_004955414:32,303,045...32,351,401
Ensembl chrNW_004955414:32,298,759...32,351,505 		JBrowse link
G Ush2a usherin ISO hair cell RGD PMID:16301216 RGD:8548636 NCBI chrNW_004955406:1,837,831...2,499,664
Ensembl chrNW_004955406:1,838,885...2,496,980 		JBrowse link
G Whrn whirlin located_in ISO (PMID:15590698), (PMID:15590699), (PMID:15654330) RGD
UniProt		 PMID:15590698 PMID:15590699 PMID:15654330 PMID:16434480 RGD:1600128 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266 		JBrowse link
G Zswim6 zinc finger SWIM-type containing 6 located_in ISO (PMID:25105228) MGI PMID:25105228 NCBI chrNW_004955446:7,010,005...7,188,763
Ensembl chrNW_004955446:7,011,836...7,188,521 		JBrowse link
stereocilium base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clic5 chloride intracellular channel 5 located_in ISO PMID:24285636
(PMID:37952086)		 UniProt PMID:24285636 PMID:37952086 RGD:401966878 NCBI chrNW_004955437:11,053,885...11,118,150
Ensembl chrNW_004955437:11,053,885...11,118,255 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in ISO (PMID:30380417) MGI PMID:30380417 NCBI chrNW_004955415:8,203,968...8,220,148
Ensembl chrNW_004955415:8,203,968...8,220,148 		JBrowse link
G Myo7a myosin VIIA located_in ISO (PMID:17567809) UniProt PMID:17567809 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500 		JBrowse link
G Pjvk pejvakin located_in ISO (PMID:28209736) MGI PMID:28209736 NCBI chrNW_004955403:18,386,705...18,393,771
Ensembl chrNW_004955403:18,386,705...18,393,771 		JBrowse link
G Ptprq protein tyrosine phosphatase receptor type Q located_in ISO (PMID:24285636), (PMID:37952086) UniProt PMID:24285636 PMID:37952086 NCBI chrNW_004955405:19,123,905...19,318,619
Ensembl chrNW_004955405:19,123,905...19,318,619 		JBrowse link
G Rdx radixin located_in ISO (PMID:24285636), (PMID:30159668) UniProt PMID:24285636 PMID:30159668 NCBI chrNW_004955412:12,100,436...12,184,444
Ensembl chrNW_004955412:12,100,359...12,172,545 		JBrowse link
G Tprn taperin located_in ISO (PMID:24285636), (PMID:28209736), (PMID:30159668), (PMID:30380417), (PMID:37952086) UniProt PMID:24285636 PMID:28209736 PMID:30159668 PMID:30380417 PMID:37952086 NCBI chrNW_004955513:5,196,871...5,205,945
Ensembl chrNW_004955513:5,197,280...5,203,445 		JBrowse link
stereocilium coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkhd1l1 PKHD1 like 1 located_in ISO (PMID:31444330) MGI PMID:31444330 NCBI chrNW_004955417:16,776,674...16,923,058
Ensembl chrNW_004955417:16,776,731...16,922,789 		JBrowse link
stereocilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B IDA RGD PMID:10408625 (All species) (All species), RGD:11556226 NCBI chrNW_004955513:5,654,915...5,823,094
Ensembl chrNW_004955513:5,654,238...5,824,386 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in ISO PMID:24958875 MGI PMID:24958875 RGD:10047244 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589 		JBrowse link
G Ush2a usherin located_in ISO (PMID:16301217) BHF-UCL PMID:16301217 NCBI chrNW_004955406:1,837,831...2,499,664
Ensembl chrNW_004955406:1,838,885...2,496,980 		JBrowse link
stereocilium shaft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fchsd2 FCH and double SH3 domains 2 located_in ISO (PMID:23437151) UniProt PMID:23437151 NCBI chrNW_004955414:18,343,832...18,597,675
Ensembl chrNW_004955414:18,343,832...18,597,675 		JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in ISO (PMID:30380417) MGI PMID:30380417 NCBI chrNW_004955415:8,203,968...8,220,148
Ensembl chrNW_004955415:8,203,968...8,220,148 		JBrowse link
stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (PMID:29293958) UniProt PMID:29293958 NCBI chrNW_004955435:5,099,576...5,230,252
Ensembl chrNW_004955435:5,099,107...5,248,679 		JBrowse link
G Cdh23 cadherin related 23 located_in ISO (PMID:12485990), (PMID:17050716), (PMID:24920589) MGI PMID:12485990 PMID:17050716 PMID:24920589 NCBI chrNW_004955437:19,683,792...20,044,718
Ensembl chrNW_004955437:19,684,473...20,003,819 		JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in ISO (PMID:21368133) MGI PMID:21368133 NCBI chrNW_004955555:1,859,220...1,878,912
Ensembl chrNW_004955555:1,859,220...1,878,912 		JBrowse link
G Coro1a coronin 1A is_active_in ISO (PMID:26754646) MGI PMID:26754646 NCBI chrNW_004955493:6,815,148...6,820,295
Ensembl chrNW_004955493:6,811,430...6,826,485 		JBrowse link
G Eps8 EGFR pathway substrate 8, signaling adaptor located_in ISO (PMID:23918390) UniProt PMID:23918390 NCBI chrNW_004955413:12,267,701...12,386,088
Ensembl chrNW_004955413:12,266,371...12,386,088 		JBrowse link
G Eps8l2 EPS8 signaling adaptor L2 located_in ISO (PMID:23918390) UniProt PMID:23918390 NCBI chrNW_004955476:11,371,928...11,390,588
Ensembl chrNW_004955476:11,372,571...11,389,804 		JBrowse link
G Espn espin is_active_in
located_in		 ISO (PMID:26754646)
(PMID:22264607), (PMID:26754646)		 MGI PMID:22264607 PMID:26754646 NCBI chrNW_004955486:6,130,190...6,156,859 JBrowse link
G Espnl espin like is_active_in
located_in		 ISO (PMID:26754646)
(PMID:26926603)		 MGI
UniProt		 PMID:26754646 PMID:26926603 NCBI chrNW_004955542:2,430,610...2,453,738
Ensembl chrNW_004955542:2,430,712...2,453,361 		JBrowse link
G Homer2 homer scaffold protein 2 located_in ISO (PMID:25816005) UniProt PMID:25816005 NCBI chrNW_004955416:13,671,115...13,828,413
Ensembl chrNW_004955416:13,741,161...13,818,060 		JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (PMID:23217710) MGI PMID:23217710 NCBI chrNW_004955437:3,644,448...3,650,688 JBrowse link
G Morn4 MORN repeat containing 4 is_active_in
located_in		 ISO (PMID:26754646) MGI
UniProt		 PMID:26754646 NCBI chrNW_004955507:3,713,483...3,725,303
Ensembl chrNW_004955507:3,713,483...3,724,990 		JBrowse link
G Myo3a myosin IIIA is_active_in
located_in		 ISO (PMID:26754646)
(PMID:21165622), (PMID:22264607), (PMID:26754646)		 MGI
UniProt		 PMID:21165622 PMID:22264607 PMID:26754646 NCBI chrNW_004955429:3,172,457...3,358,688
Ensembl chrNW_004955429:3,172,996...3,358,688 		JBrowse link
G Myo3b myosin IIIB is_active_in
located_in		 ISO (PMID:26754646)
(PMID:22264607), (PMID:26754646)		 MGI
UniProt		 PMID:22264607 PMID:26754646 NCBI chrNW_004955449:4,128,816...4,546,651
Ensembl chrNW_004955449:4,129,823...4,546,296 		JBrowse link
G Nherf1 NHERF family PDZ scaffold protein 1 located_in ISO (PMID:24920589) MGI PMID:24920589 NCBI chrNW_004955553:1,639,267...1,656,850
Ensembl chrNW_004955553:1,639,267...1,656,850 		JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO (PMID:31444330) MGI PMID:31444330 NCBI chrNW_004955417:16,776,674...16,923,058
Ensembl chrNW_004955417:16,776,731...16,922,789 		JBrowse link
G Strc stereocilin located_in ISO (PMID:18849963), (PMID:21165971), (PMID:24920589), (PMID:31448880) MGI PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 NCBI chrNW_004955416:10,139,420...10,141,906 JBrowse link
G Tmc1 transmembrane channel like 1 located_in ISO (PMID:22105175) MGI PMID:22105175 NCBI chrNW_004955434:398,734...500,378
Ensembl chrNW_004955434:398,829...529,810 		JBrowse link
G Tmc2 transmembrane channel like 2 located_in ISO (PMID:22105175) MGI PMID:22105175 NCBI chrNW_004955415:13,545,266...13,626,125
Ensembl chrNW_004955415:13,565,935...13,625,843 		JBrowse link
G Whrn whirlin located_in ISO PMID:23055499
(PMID:24334608), (PMID:31448880)		 UniProt
MGI		 PMID:23055499 PMID:24334608 PMID:31448880 RGD:13800540 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12777
    cellular anatomical structure 12621
      organelle 10033
        stereocilium 63
          actin filament bundle of stereocilium 0
          stereocilium base 7
          stereocilium coat 1
          stereocilium membrane 3
          stereocilium shaft 2
          stereocilium tip 19
Path 2
Term Annotations click to browse term
  cellular_component 12777
    cellular anatomical structure 12621
      cell projection 2128
        plasma membrane bounded cell projection 2098
          neuron projection 1292
            stereocilium 63
              actin filament bundle of stereocilium 0
              stereocilium base 7
              stereocilium coat 1
              stereocilium membrane 3
              stereocilium shaft 2
              stereocilium tip 19
paths to the root