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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of intracellular transport
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Accession:GO:0032386 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the directed movement of substances within cells.



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regulation of intracellular transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lmx1b LIM homeobox transcription factor 1 beta involved_in ISO (PMID:25915474) RGD PMID:25915474 NCBI chr 3:16,862,195...16,940,899 JBrowse link
G Reep1 receptor accessory protein 1 involved_in ISO (PMID:24098485) RGD PMID:24098485 NCBI chr 4:105,303,974...105,420,611 JBrowse link
G Reep2 receptor accessory protein 2 involved_in ISO (PMID:24098485) RGD PMID:24098485 NCBI chr18:26,438,130...26,447,165 JBrowse link
G Reep6 receptor accessory protein 6 involved_in ISO (PMID:24098485) RGD PMID:24098485 NCBI chr 7:9,373,927...9,380,845 JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:211,828,791...211,834,474 JBrowse link
negative regulation of calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrc histidine rich calcium binding protein IMP RGD PMID:22952658 RGD:9685495 NCBI chr 1:104,949,750...104,953,475 JBrowse link
G Mrln myoregulin acts_upstream_of_or_within ISO (PMID:25640239) RGD PMID:25640239 NCBI chr20:18,406,789...18,423,805 JBrowse link
G Pln phospholamban involved_in ISO
IBA
ISS
(PMID:8349590)
(PMID:30299255)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:8349590 PMID:30299255 GO_REF:0000024 GO_REF:0000033 NCBI chr20:33,166,512...33,182,241 JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 involved_in ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:8,049,339...8,057,812 JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:23580231) RGD PMID:23580231 NCBI chr20:30,166,310...30,178,718 JBrowse link
negative regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snx12 sorting nexin 12 involved_in ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:66,226,995...66,356,945 JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:45,992,446...46,025,361 JBrowse link
negative regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap1 Rho GTPase activating protein 1 involved_in ISO
IBA
(PMID:16380373)
GO_REF:0000033
RGD
GO_Central
PMID:16380373 GO_REF:0000033 NCBI chr 3:77,621,377...77,643,400 JBrowse link
G Arhgap8 Rho GTPase activating protein 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:115,842,223...115,902,094 JBrowse link
G Mtmr4 myotubularin related protein 4 involved_in ISO (PMID:20736309) RGD PMID:20736309 NCBI chr10:72,890,665...72,913,598 JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:28,642,660...28,662,689 JBrowse link
negative regulation of intracellular protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISO
ISS
(PMID:18431508)
GO_REF:0000024
RGD
UniProt
PMID:18431508 GO_REF:0000024 NCBI chr11:91,226,524...91,240,244 JBrowse link
negative regulation of intracellular transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cryaa crystallin, alpha A involved_in ISO (PMID:14752512) RGD PMID:14752512 NCBI chr20:9,783,605...9,787,351 JBrowse link
G Cryab crystallin, alpha B involved_in ISO (PMID:14752512) RGD PMID:14752512 NCBI chr 8:59,989,885...59,995,532 JBrowse link
G Map1b microtubule-associated protein 1B acts_upstream_of_or_within ISO MGI:2148182 (PMID:16536727) RGD PMID:16536727 NCBI chr 2:32,551,423...32,644,471 JBrowse link
G Mapt microtubule-associated protein tau acts_upstream_of_or_within ISO MGI:2385630 (PMID:16536727) RGD PMID:16536727 NCBI chr10:89,638,618...89,736,108 JBrowse link
negative regulation of late endosome to lysosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:23563491) RGD PMID:23563491 NCBI chr19:21,765,771...21,801,620 JBrowse link
negative regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 IDA RGD PMID:17543276 RGD:10398727 NCBI chr17:9,150,608...9,164,982 JBrowse link
negative regulation of protein exit from endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 involved_in ISO (PMID:12202038) RGD PMID:12202038 NCBI chr 4:8,049,339...8,057,812 JBrowse link
negative regulation of protein export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bard1 BRCA1 associated RING domain 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15265711)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15265711 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:80,069,960...80,144,167 JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17591690)
Ensembl
RGD
PMID:17591690 GO_REF:0000107 NCBI chr 4:11,647,098...11,651,606 JBrowse link
G Fam76b family with sequence similarity 76, member B involved_in ISO (PMID:37643469) RGD PMID:37643469 NCBI chr 8:18,971,357...18,993,442 JBrowse link
G Hdac3 histone deacetylase 3 IMP RGD PMID:21695276 RGD:7247725 NCBI chr18:29,770,637...29,789,850 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
ISS
UniProtKB:Q99683|UniProtKB:Q9UER7 (PMID:15983381)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:15983381 GO_REF:0000024 NCBI chr 5:166,636,551...166,659,825 JBrowse link
G Rangap1 RAN GTPase activating protein 1 involved_in ISO (PMID:16449645) RGD PMID:16449645 NCBI chr 7:115,104,820...115,130,564 JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:17245429) RGD PMID:17245429 NCBI chr 9:93,758,975...93,825,068 JBrowse link
G Txn1 thioredoxin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18555775)
Ensembl
RGD
PMID:18555775 GO_REF:0000107 NCBI chr 5:77,507,455...77,519,685 JBrowse link
negative regulation of protein import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 IMP NFATc3 RGD PMID:19358331 RGD:2312604 NCBI chr10:74,118,232...74,151,366 JBrowse link
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:20060382)
Ensembl
RGD
PMID:20060382 GO_REF:0000107 NCBI chr 7:75,415,959...75,668,696 JBrowse link
G Apod apolipoprotein D involved_in ISO
ISS
(PMID:14551159)
GO_REF:0000024
RGD
UniProt
PMID:14551159 GO_REF:0000024 NCBI chr11:82,936,216...82,957,264 JBrowse link
G Cabp1 calcium binding protein 1 involved_in IMP PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chr12:41,385,234...41,448,930 JBrowse link
G Cd36 CD36 molecule involved_in IEA
ISO
GO_REF:0000107
(PMID:20978343)
Ensembl
RGD
PMID:20978343 GO_REF:0000107 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISO
ISS
(PMID:10593895)
GO_REF:0000024
RGD
UniProt
PMID:10593895 GO_REF:0000024 NCBI chr 3:126,989,800...127,025,071 JBrowse link
G Ei24 EI24, autophagy associated transmembrane protein acts_upstream_of_or_within ISO (PMID:24821838) RGD PMID:24821838 NCBI chr 8:44,683,138...44,699,502 JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (PMID:24681597) RGD PMID:24681597 NCBI chr 3:120,171,301...120,213,555 JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA STAT5b RGD PMID:16584384 RGD:1625011 NCBI chr 3:152,186,787...152,248,320 JBrowse link
G Mdfic MyoD family inhibitor domain containing involved_in ISO (PMID:15207726) RGD PMID:15207726 NCBI chr 4:43,972,310...44,052,162 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176057|MGI:2450311 (PMID:12469121)
Ensembl
RGD
PMID:12469121 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086 JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in ISO (PMID:16938301) RGD PMID:16938301 NCBI chr 6:78,593,844...78,597,307 JBrowse link
G Pkia cAMP-dependent protein kinase inhibitor alpha acts_upstream_of_or_within ISO (PMID:9218452) RGD PMID:9218452 NCBI chr 2:94,398,869...94,473,638 JBrowse link
G Pkig cAMP-dependent protein kinase inhibitor gamma acts_upstream_of_or_within ISO (PMID:9218452) RGD PMID:9218452 NCBI chr 3:172,749,871...172,817,514 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha IMP Nfkb1 RGD PMID:18322138 RGD:8693423 NCBI chr10:36,856,534...36,878,789 JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (PMID:22365972) RGD PMID:22365972 NCBI chr 9:35,943,522...35,967,367 JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:28355567) RGD PMID:28355567 NCBI chr 7:8,082,312...8,087,776 JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (PMID:17264123) RGD PMID:17264123 NCBI chr 9:61,078,790...61,108,697 JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISO (PMID:28393202) RGD PMID:28393202 NCBI chr 2:137,969,476...137,977,620 JBrowse link
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta involved_in IEA
ISO
GO_REF:0000107
(PMID:10869435)
Ensembl
RGD
PMID:10869435 GO_REF:0000107 NCBI chr 3:173,078,904...173,101,508 JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:23285084) RGD PMID:23285084 NCBI chr15:92,180,629...92,180,712 JBrowse link
G Mir185 microRNA 185 acts_upstream_of ISO RNAcentral:URS00002367FA_9606|RNAcentral:URS00004176D4_9606 (PMID:24296663) RGD PMID:24296663 NCBI chr11:82,664,716...82,664,795 JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:26520906) RGD PMID:26520906 NCBI chr17:1,813,427...1,813,523 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:126,440,102...126,462,507 JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr10:55,727,764...55,739,442 JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:12,754,490...12,768,454 JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr14:108,856,661...108,894,511 JBrowse link
G Os9 OS9, endoplasmic reticulum lectin involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 7:62,915,498...62,957,591 JBrowse link
G Svip small VCP interacting protein involved_in ISO
IBA
IEA
(PMID:25660456)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:25660456 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:101,587,128...101,592,818 JBrowse link
G Ubac2 UBA domain containing 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr15:98,960,139...99,107,795 JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:10,983,734...11,005,468 JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 5:52,218,807...52,237,805 JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO (PMID:24068323) RGD PMID:24068323 NCBI chr13:42,175,047...42,181,661 JBrowse link
negative regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfip1 ARF interacting protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:25789876)
Ensembl
RGD
PMID:25789876 GO_REF:0000107 NCBI chr 2:169,843,804...169,924,136 JBrowse link
negative regulation of ribosomal large subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm10 RNA binding motif protein 10 involved_in ISO (PMID:35393574) RGD PMID:35393574 NCBI chr  X:1,540,399...1,572,571 JBrowse link
negative regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx39a DExD-box helicase 39A involved_in ISO
IEA
(PMID:32393512)
GO_REF:0000107
RGD
Ensembl
PMID:32393512 GO_REF:0000107 NCBI chr19:41,323,465...41,331,413 JBrowse link
G Nup153 nucleoporin 153 involved_in ISO
IEA
ISS
(PMID:22253824)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22253824 GO_REF:0000024 GO_REF:0000107 NCBI chr17:18,178,434...18,231,109 JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISO
IEA
ISS
(PMID:21613532), (PMID:22253824)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21613532 PMID:22253824 GO_REF:0000024 GO_REF:0000107 NCBI chr13:62,424,312...62,487,502 JBrowse link
positive regulation of anterograde axonal transport of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fez1 fasciculation and elongation protein zeta 1 IMP RGD PMID:17173861 RGD:13208824 NCBI chr 8:36,544,462...36,589,684 JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:75,173,038...75,431,606 JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,932,481...156,995,981 JBrowse link
G Trim46 tripartite motif-containing 46 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:176,939,253...176,952,285 JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:167,458,640...167,543,556 JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:75,173,038...75,431,606 JBrowse link
positive regulation of axo-dendritic protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif3a kinesin family member 3a IMP RGD PMID:20694152 RGD:11060126 NCBI chr10:38,226,388...38,263,062 JBrowse link
positive regulation of calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 involved_in ISO (PMID:26816378), (PMID:30299255) RGD PMID:26816378 PMID:30299255 NCBI chr 2:147,935,219...147,938,083 JBrowse link
positive regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab2 DAB adaptor protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:21995445)
Ensembl
RGD
PMID:21995445 GO_REF:0000107 NCBI chr 2:57,241,947...57,294,893 JBrowse link
G Ezr ezrin involved_in ISO
IBA
IEA
UniProtKB:P26038|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21148287 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:49,373,033...49,416,573 JBrowse link
G Msn moesin involved_in ISO
IBA
IEA
UniProtKB:P15311|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21148287 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011 JBrowse link
G Mtmr2 myotubularin related protein 2 involved_in IMP PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chr 8:10,617,993...10,670,724 JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:79,627,399...79,710,709 JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in ISO
IEA
(PMID:21724833)
GO_REF:0000107
RGD
Ensembl
PMID:21724833 GO_REF:0000107 NCBI chr 8:110,360,804...110,383,271 JBrowse link
G Rab21 RAB21, member RAS oncogene family involved_in ISO (PMID:15561770) RGD PMID:15561770 NCBI chr 7:52,790,158...52,814,943 JBrowse link
G Rdx radixin involved_in ISO
IBA
UniProtKB:P15311|UniProtKB:P26038 (PMID:21148287)
GO_REF:0000033
RGD
GO_Central
PMID:21148287 GO_REF:0000033 NCBI chr 8:61,275,792...61,348,260 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:21148287) RGD PMID:21148287 NCBI chr 8:53,580,939...53,595,378 JBrowse link
positive regulation of early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:22621900) RGD PMID:22621900 NCBI chr 8:51,238,713...51,401,458 JBrowse link
positive regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn2 actinin alpha 2 involved_in ISO (PMID:19815520) RGD PMID:19815520 NCBI chr17:58,143,334...58,210,622 JBrowse link
G Ehd1 EH-domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21177873)
UniProt
RGD
PMID:21177873 GO_REF:0000024 NCBI chr 1:203,579,850...203,602,226 JBrowse link
G Ehd2 EH-domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:21177873)
UniProt
RGD
PMID:21177873 GO_REF:0000024 NCBI chr 1:76,639,568...76,658,747 JBrowse link
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in ISO
ISS
IEA
(PMID:27440922)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:27440922 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:45,388,451...45,502,089 JBrowse link
G Pla2g4e phospholipase A2, group IVE involved_in ISO (PMID:24413173) RGD PMID:24413173 NCBI chr 3:127,586,318...127,652,369 JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:22621900) RGD PMID:22621900 NCBI chr 8:51,238,713...51,401,458 JBrowse link
positive regulation of endosome to plasma membrane protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in ISO (PMID:25589740) RGD PMID:25589740 NCBI chr 6:95,051,527...95,061,075 JBrowse link
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5315712 (PMID:26965651) RGD PMID:26965651 NCBI chr14:101,081,667...101,185,738 JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chr16:51,808,465...51,878,060 JBrowse link
positive regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 IMP RGD PMID:15618550 RGD:9684856 NCBI chr10:44,497,543...44,513,994 JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in IMP PMID:14734546 UniProt PMID:14734546 RGD:1303970 NCBI chr 9:55,975,574...56,044,325 JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360) RGD PMID:17855360 NCBI chr 8:51,238,713...51,401,458 JBrowse link
G Stx18 syntaxin 18 involved_in ISO
IEA
(PMID:10788491), (PMID:19401338)
GO_REF:0000107
RGD
Ensembl
PMID:10788491 PMID:19401338 GO_REF:0000107 NCBI chr14:72,670,683...72,761,423 JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:140,768,537...140,787,010 JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:16530456) RGD PMID:16530456 NCBI chr 4:150,095,743...150,221,104 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:15449949) RGD PMID:15449949 NCBI chr 5:128,035,714...128,110,015 JBrowse link
positive regulation of intracellular lipid transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 involved_in ISO (PMID:27551807) RGD PMID:27551807 NCBI chr 9:80,272,121...80,445,340 JBrowse link
positive regulation of intracellular protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asph aspartate-beta-hydroxylase involved_in ISO (PMID:22586105) RGD PMID:22586105 NCBI chr 5:27,398,933...27,611,519 JBrowse link
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in ISO (PMID:24425863) RGD PMID:24425863 NCBI chr 1:205,817,374...205,823,928 JBrowse link
G Cdc42 cell division cycle 42 IMP RGD PMID:21844200 RGD:5688279 NCBI chr 5:154,838,478...154,876,629 JBrowse link
G Cep131 centrosomal protein 131 involved_in ISO (PMID:24550735) RGD PMID:24550735 NCBI chr10:105,346,015...105,370,380 JBrowse link
G Cep290 centrosomal protein 290 involved_in ISO (PMID:22797915) RGD PMID:22797915 NCBI chr 7:37,196,765...37,285,955 JBrowse link
G Chrm1 cholinergic receptor, muscarinic 1 IDA RGD PMID:17908240 RGD:7242040 NCBI chr 1:205,567,226...205,583,001 JBrowse link
G Dctn1 dynactin subunit 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:117,228,722...117,261,528 JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E IMP RGD PMID:23737983 RGD:10755504 NCBI chr 7:74,339,848...74,372,483 JBrowse link
G Ergic3 ERGIC and golgi 3 involved_in ISO (PMID:31142615) RGD PMID:31142615 NCBI chr 3:144,525,059...144,534,813 JBrowse link
G Ice1 interactor of little elongation complex ELL subunit 1 involved_in ISO (PMID:23932780) RGD PMID:23932780 NCBI chr 1:34,468,839...34,508,346 JBrowse link
G Kif20b kinesin family member 20B involved_in ISO (PMID:23864681) RGD PMID:23864681 NCBI chr 1:232,428,293...232,483,798 JBrowse link
G Kif3a kinesin family member 3a IMP RGD PMID:15048131 RGD:11049589 NCBI chr10:38,226,388...38,263,062 JBrowse link
G Kif5b kinesin family member 5B IMP RGD PMID:17241275 RGD:11059543 NCBI chr17:56,185,386...56,222,990 JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19449338)
UniProt
RGD
PMID:19449338 GO_REF:0000024 NCBI chr 7:9,534,530...9,536,990 JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 involved_in ISO (PMID:19449338) RGD PMID:19449338 NCBI chr 8:66,199,694...66,213,513 JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:19449338)
Ensembl
RGD
PMID:19449338 GO_REF:0000107 NCBI chr 2:182,073,212...182,076,147 JBrowse link
G Pcm1 pericentriolar material 1 involved_in ISO (PMID:22797915), (PMID:24550735) RGD PMID:22797915 PMID:24550735 NCBI chr16:57,711,833...57,808,842 JBrowse link
G Pcnt pericentrin involved_in ISO (PMID:22797915) RGD PMID:22797915 NCBI chr20:12,190,597...12,278,723 JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO
IEA
(PMID:27807006)
GO_REF:0000107
RGD
Ensembl
PMID:27807006 GO_REF:0000107 NCBI chr 2:160,303,465...160,346,086 JBrowse link
G Plk3 polo-like kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20951827)
UniProt
RGD
PMID:20951827 GO_REF:0000024 NCBI chr 5:135,843,725...135,848,900 JBrowse link
G Prr5l proline rich 5 like involved_in ISO
IEA
ISS
(PMID:21964062)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21964062 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:108,458,107...108,628,552 JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:24788816)
UniProt
RGD
PMID:24788816 GO_REF:0000024 NCBI chr13:45,859,930...45,865,468 JBrowse link
G Ripor1 RHO family interacting cell polarization regulator 1 involved_in ISO
ISS
IEA
(PMID:27807006)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:27807006 GO_REF:0000024 GO_REF:0000107 NCBI chr19:50,387,447...50,416,323 JBrowse link
G Rufy3 RUN and FYVE domain containing 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:24720729)
UniProt
RGD
PMID:24720729 GO_REF:0000024 NCBI chr14:19,431,530...19,506,476 JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISS
ISO
GO_REF:0000024
(PMID:19273613)
UniProt
RGD
PMID:19273613 GO_REF:0000024 NCBI chr13:62,424,312...62,487,502 JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISO (PMID:25681460) RGD PMID:25681460 NCBI chr12:47,599,161...47,638,143 JBrowse link
G Vamp2 vesicle-associated membrane protein 2 acts_upstream_of_or_within ISO (PMID:18227281) RGD PMID:18227281 NCBI chr10:54,292,423...54,296,657 JBrowse link
G Zfand1 zinc finger AN1-type containing 1 involved_in ISO (PMID:29804830) RGD PMID:29804830 NCBI chr 2:91,444,497...91,457,540 JBrowse link
positive regulation of intracellular transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn10 calpain 10 involved_in IEA
ISO
GO_REF:0000107
(PMID:12974673)
Ensembl
RGD
PMID:12974673 GO_REF:0000107 NCBI chr 9:100,943,665...100,957,910 JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27462074)
UniProt
Ensembl
RGD
PMID:27462074 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:135,436,375...135,502,117 JBrowse link
G Mlc1 modulator of VRAC current 1 involved_in ISO
ISS
(PMID:19931615)
GO_REF:0000024
RGD
UniProt
PMID:19931615 GO_REF:0000024 NCBI chr 7:120,046,705...120,067,049 JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in ISO (PMID:27462074) RGD PMID:27462074 NCBI chr 1:165,709,893...165,784,848 JBrowse link
G Spag5 sperm associated antigen 5 involved_in ISO (PMID:27462074) RGD PMID:27462074 NCBI chr10:63,198,717...63,216,746 JBrowse link
positive regulation of late endosome to lysosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 IMP RGD PMID:21421027 RGD:9684860 NCBI chr10:44,497,543...44,513,994 JBrowse link
positive regulation of nucleocytoplasmic transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO
IEA
(PMID:17218261)
GO_REF:0000107
RGD
Ensembl
PMID:17218261 GO_REF:0000107 NCBI chr 8:82,264,751...82,349,642 JBrowse link
positive regulation of protein exit from endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule involved_in ISO
ISS
IEA
(PMID:16449649)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16449649 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:207,665,274...207,681,094 JBrowse link
G Sec16b SEC16 homolog B, endoplasmic reticulum export factor involved_in ISO (PMID:21768384) RGD PMID:21768384 NCBI chr13:69,665,757...69,727,199 JBrowse link
G Slc35d3 solute carrier family 35, member D3 acts_upstream_of_or_within ISO MGI:3802578 (PMID:24550737) RGD PMID:24550737 NCBI chr 1:14,565,482...14,573,581 JBrowse link
G Slc51b SLC51 subunit beta involved_in ISO (PMID:17650074), (PMID:22535958) RGD PMID:17650074 PMID:22535958 NCBI chr 8:65,931,891...65,939,953 JBrowse link
G Sorl1 sortilin related receptor 1 involved_in ISO (PMID:17855360) RGD PMID:17855360 NCBI chr 8:51,238,713...51,401,458 JBrowse link
G Tm9sf4 transmembrane 9 superfamily member 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25999474)
UniProt
Ensembl
RGD
PMID:25999474 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:141,627,128...141,675,386 JBrowse link
G Tmem30a transmembrane protein 30A involved_in ISO
IEA
(PMID:21914794)
GO_REF:0000107
RGD
Ensembl
PMID:21914794 GO_REF:0000107 NCBI chr 8:80,728,749...80,757,197 JBrowse link
G Tmem30b transmembrane protein 30B involved_in ISO (PMID:21914794) RGD PMID:21914794 NCBI chr 6:92,251,626...92,254,702 JBrowse link
positive regulation of protein export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32b acidic nuclear phosphoprotein 32 family member B involved_in ISO
IEA
(PMID:17178712)
GO_REF:0000107
RGD
Ensembl
PMID:17178712 GO_REF:0000107 NCBI chr 5:65,538,872...65,561,305 JBrowse link
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:26159920) RGD PMID:26159920 NCBI chr 1:192,533,460...192,557,281 JBrowse link
G Camk1 calcium/calmodulin-dependent protein kinase I involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:23867755)
(PMID:11081517)
GO_REF:0000107
RGD
Ensembl
PMID:11081517 PMID:23867755 GO_REF:0000107 NCBI chr 4:148,036,843...148,047,675 JBrowse link
G Camk4 calcium/calmodulin-dependent protein kinase IV acts_upstream_of_or_within ISO (PMID:11081517) RGD PMID:11081517 NCBI chr18:24,857,152...25,076,054 JBrowse link
G Ctdspl2 CTD small phosphatase like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:25100727)
Ensembl
RGD
PMID:25100727 GO_REF:0000107 NCBI chr 3:108,915,263...108,970,620 JBrowse link
G Emd emerin involved_in ISO
IEA
(PMID:16858403)
GO_REF:0000107
RGD
Ensembl
PMID:16858403 GO_REF:0000107 NCBI chr  X:152,038,990...152,042,190 JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS
(PMID:18680538)
GO_REF:0000024
RGD
UniProt
PMID:18680538 GO_REF:0000024 NCBI chr16:82,747,676...82,778,090 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14744935)
GO_REF:0000107
RGD
Ensembl
PMID:14744935 GO_REF:0000107 NCBI chr11:76,004,502...76,154,665 JBrowse link
G Mdm2 MDM2 proto-oncogene IMP p53 RGD PMID:17881359 RGD:2317374 NCBI chr 7:55,176,558...55,201,757 JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent, 1A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:25100727)
Ensembl
RGD
PMID:25100727 GO_REF:0000107 NCBI chr 6:97,174,955...97,216,585 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17043310)
Ensembl
RGD
PMID:17043310 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189 JBrowse link
G Prkd1 protein kinase D1 IMP Hdac5 RGD PMID:16648482 PMID:17823368 RGD:243065275, RGD:307436944 NCBI chr 6:73,460,640...73,774,433 JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in ISO
IEA
(PMID:29695716)
GO_REF:0000107
RGD
Ensembl
PMID:29695716 GO_REF:0000107 NCBI chr17:30,190,721...30,230,153 JBrowse link
G Ran RAN, member RAS oncogene family involved_in ISO (PMID:15602554) RGD PMID:15602554 NCBI chr12:27,674,049...27,678,598 JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in ISO
IEA
(PMID:23867755)
GO_REF:0000107
RGD
Ensembl
PMID:23867755 GO_REF:0000107 NCBI chr 7:128,875,772...128,898,203 JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO
ISS
(PMID:21122810)
GO_REF:0000024
RGD
UniProt
PMID:21122810 GO_REF:0000024 NCBI chr18:56,283,807...56,294,615 JBrowse link
G Sfn stratifin involved_in ISO (PMID:17938205) RGD PMID:17938205 NCBI chr 5:151,110,582...151,111,854 JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:25009184), (PMID:26787900)
(PMID:27457971)
RGD PMID:25009184 PMID:26787900 PMID:27457971 NCBI chr 7:8,082,312...8,087,776 JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in IMP PMID:11839768 UniProt PMID:11839768 RGD:8553300 NCBI chr13:62,424,312...62,487,502 JBrowse link
G Wipf1 WAS/WASL interacting protein family, member 1 IDA N-WASP RGD PMID:11687573 RGD:634538 NCBI chr 3:78,721,486...78,824,199 JBrowse link
G Xpo4 exportin 4 involved_in ISO (PMID:16449645) RGD PMID:16449645 NCBI chr15:31,717,016...31,807,723 JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in ISS
ISO
GO_REF:0000024
(PMID:12917326)
UniProt
RGD
PMID:12917326 GO_REF:0000024 NCBI chr10:61,082,934...61,120,618 JBrowse link
positive regulation of protein import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 IMP NFATc4 RGD PMID:17640527 RGD:2313203 NCBI chr 6:95,051,527...95,061,075 JBrowse link
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:26159920) RGD PMID:26159920 NCBI chr 1:192,533,460...192,557,281 JBrowse link
G Brca1 BRCA1, DNA repair associated IMP RGD PMID:19074549 RGD:10059411 NCBI chr10:86,917,693...86,978,012 JBrowse link
G Cdh1 cadherin 1 involved_in ISO (PMID:16338932) RGD PMID:16338932 NCBI chr19:51,402,178...51,471,572 JBrowse link
G Cdk1 cyclin-dependent kinase 1 IMP RGD PMID:18356527 RGD:2316481 NCBI chr20:19,265,252...19,280,456 JBrowse link
G Chp2 calcineurin-like EF hand protein 2 involved_in ISO
IEA
ISS
(PMID:18815128)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18815128 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:186,189,090...186,203,663 JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in ISO (PMID:15367675) RGD PMID:15367675 NCBI chr 5:136,380,211...136,388,229 JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:17904126) RGD PMID:17904126 NCBI chr 2:111,904,522...111,966,786 JBrowse link
G Efcab7 EF-hand calcium binding domain 7 involved_in ISO (PMID:24582806) RGD PMID:24582806 NCBI chr 5:119,640,841...119,691,566 JBrowse link
G Ep300 E1A binding protein p300 involved_in IMP
ISO
Smad-2/3/4
(PMID:24120661)
RGD PMID:24120661 PMID:18292803 RGD:2312266 NCBI chr 7:114,987,857...115,058,652 JBrowse link
G Flna filamin A involved_in ISO (PMID:15684392) RGD PMID:15684392 NCBI chr  X:157,159,051...157,185,559 JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:108075 (PMID:17043310) RGD PMID:17043310 NCBI chr17:54,134,064...54,405,198 JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IMP Mapk1/3 RGD PMID:24262995 RGD:39939015 NCBI chr12:15,217,217...15,222,679 JBrowse link
G Hcls1 hematopoietic cell specific Lyn substrate 1 involved_in ISO (PMID:23001182) RGD PMID:23001182 NCBI chr11:77,322,873...77,346,333 JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO
ISS
(PMID:25190803)
GO_REF:0000024
RGD
UniProt
PMID:25190803 GO_REF:0000024 NCBI chr18:29,770,637...29,789,850 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IMP RGD PMID:20980790 RGD:5686397 NCBI chr 6:135,523,604...135,529,687 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IMP RGD PMID:20980790 RGD:5686397 NCBI chr 9:22,930,249...22,935,929 JBrowse link
G Hyal2 hyaluronidase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:19366691)
Ensembl
RGD
PMID:19366691 GO_REF:0000107 NCBI chr 8:108,241,895...108,246,853 JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:22504299) RGD PMID:22504299 NCBI chr 7:55,789,180...55,793,216 JBrowse link
G Il6 interleukin 6 IDA Stat3 RGD PMID:12015387 RGD:2306946 NCBI chr 4:5,889,999...5,894,575 JBrowse link
G Ipo5 importin 5 involved_in ISO (PMID:22730302) RGD PMID:22730302 NCBI chr15:104,397,626...104,447,985 JBrowse link
G Jak2 Janus kinase 2 IMP Stat3 RGD PMID:15530849 RGD:1641930 NCBI chr 1:236,408,905...236,468,769 JBrowse link
G Jup junction plakoglobin involved_in ISO
IEA
(PMID:10825188), (PMID:14661054)
GO_REF:0000107
RGD
Ensembl
PMID:10825188 PMID:14661054 GO_REF:0000107 NCBI chr10:85,300,438...85,327,378 JBrowse link
G Lep leptin involved_in ISO (PMID:21234744) RGD PMID:21234744 NCBI chr 4:58,626,529...58,640,663 JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in IMP PMID:19524539 UniProt PMID:19524539 RGD:12793003 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16954198)
Ensembl
RGD
PMID:16954198 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:18818105) RGD PMID:18818105 NCBI chr 3:118,451,650...118,466,094 JBrowse link
G Nutf2 nuclear transport factor 2 IMP RGD PMID:9368653 RGD:9831374 NCBI chr19:33,752,319...33,773,595 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20348926)
GO_REF:0000107
(PMID:20348923)
UniProt
RGD
Ensembl
PMID:20348923 PMID:20348926 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:34,612,946...34,697,660 JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20348926)
UniProt
Ensembl
RGD
PMID:20348926 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,699,389...18,708,045 JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA
(PMID:19059439)
GO_REF:0000107
RGD
Ensembl
PMID:19059439 GO_REF:0000107 NCBI chr16:5,775,681...5,806,122 JBrowse link
G Prkcq protein kinase C, theta IMP RGD PMID:12697665 RGD:724661 NCBI chr17:72,156,215...72,288,508 JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (PMID:27184844) RGD PMID:27184844 NCBI chr 6:73,460,640...73,774,433 JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:10508860) RGD PMID:10508860 NCBI chr 6:109,054,160...109,106,191 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP Nfkb p65 RGD PMID:20472710 RGD:4891488 NCBI chr13:64,714,063...64,722,320 JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23871208) RGD PMID:23871208 NCBI chr 2:191,366,761...191,414,782 JBrowse link
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 IMP RGD PMID:12483215 RGD:9835024 NCBI chr 1:97,620,638...97,681,186 JBrowse link
G Ran RAN, member RAS oncogene family involved_in ISO (PMID:18691641) RGD PMID:18691641 NCBI chr12:27,674,049...27,678,598 JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISS
ISO
GO_REF:0000024
(PMID:21122810)
UniProt
RGD
PMID:21122810 GO_REF:0000024 NCBI chr18:56,283,807...56,294,615 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:108075 (PMID:17043310)
Ensembl
RGD
PMID:17043310 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170 JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95729|MGI:98297 (PMID:17043310)
Ensembl
RGD
PMID:17043310 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280 JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28585542) RGD PMID:28585542 NCBI chr 5:164,330,452...164,348,435 JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20060382) RGD PMID:20060382 NCBI chr 5:114,722,815...114,849,535 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:19366691)
GO_REF:0000024
RGD
AgBase
PMID:19366691 GO_REF:0000024 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IMP NF-kappaB RGD PMID:20967881 RGD:5130945 NCBI chr 4:159,837,119...159,849,817 JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18794356)
UniProt
Ensembl
RGD
PMID:18794356 GO_REF:0000024 GO_REF:0000107 NCBI chr13:62,424,312...62,487,502 JBrowse link
G Trim28 tripartite motif-containing 28 involved_in ISS
ISO
GO_REF:0000024
(PMID:23665872)
UniProt
RGD
PMID:23665872 GO_REF:0000024 NCBI chr 1:82,724,842...82,731,566 JBrowse link
G Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO MGI:3043446 (PMID:15271982) RGD PMID:15271982 NCBI chr 8:61,259,415...61,347,789 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO
IEA
(PMID:21118991)
GO_REF:0000107
RGD
Ensembl
PMID:21118991 GO_REF:0000107 NCBI chr 7:69,115,216...69,224,843 JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:25190803) RGD PMID:25190803 NCBI chr14:84,604,623...84,609,707 JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:24048733) RGD PMID:24048733 NCBI chr 5:142,661,193...142,670,051 JBrowse link
G Zic1 Zic family member 1 involved_in ISO (PMID:11238441) RGD PMID:11238441 NCBI chr 8:100,785,282...100,797,716 JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO
IBA
(PMID:11283611)
(PMID:15767679), (PMID:22422766)
GO_REF:0000033
RGD
GO_Central
PMID:11283611 PMID:15767679 PMID:22422766 GO_REF:0000033 NCBI chr 8:46,564,898...46,574,719 JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07018244.2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Anxa2 annexin A2 involved_in ISO
IBA
IEA
(PMID:22848640)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:22848640 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:78,986,252...79,022,638 JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO
IEA
(PMID:12417523), (PMID:12464675), (PMID:15166224)
GO_REF:0000107
RGD
Ensembl
PMID:12417523 PMID:12464675 PMID:15166224 GO_REF:0000107 NCBI chr 5:152,239,296...152,262,290 JBrowse link
positive regulation of retrograde axon cargo transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caly calcyon neuron-specific vesicular protein IMP RGD PMID:29949458 RGD:15097509 NCBI chr 1:194,862,671...194,873,861 JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:156,932,481...156,995,981 JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 involved_in ISO (PMID:18555783) RGD PMID:18555783 NCBI chr  X:151,397,567...151,429,666 JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO UniProtKB:Q9BV94 (PMID:24200403) RGD PMID:24200403 NCBI chr 4:141,797,631...141,829,717 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO UniProtKB:Q92611 (PMID:24200403) RGD PMID:24200403 NCBI chr 3:144,201,604...144,227,423 JBrowse link
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27440922)
UniProt
Ensembl
RGD
PMID:27440922 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:45,388,451...45,502,089 JBrowse link
positive regulation of ribosomal small subunit export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Riok2 RIO kinase 2 involved_in ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:66,776,215...66,792,480 JBrowse link
positive regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in ISO (PMID:19864460) RGD PMID:19864460 NCBI chr 7:54,798,452...54,887,711 JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11402034) RGD PMID:11402034 NCBI chr13:65,602,322...65,639,098 JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21613532)
UniProt
RGD
PMID:21613532 GO_REF:0000024 NCBI chr 5:142,051,844...142,089,175 JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:68,821,026...68,829,863 JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:119,405,103...119,446,861 JBrowse link
positive regulation of vesicle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stk11 serine/threonine kinase 11 involved_in ISO
IBA
IMP
(PMID:24643070)
GO_REF:0000033
RGD
GO_Central
PMID:24643070 PMID:24643070 GO_REF:0000033, RGD:30309925 NCBI chr 7:10,225,204...10,241,965 JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A acts_upstream_of_or_within ISO (PMID:19966784) RGD PMID:19966784 NCBI chr20:30,166,310...30,178,718 JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:4440619|MGI:4440621 (PMID:19966784) RGD PMID:19966784 NCBI chr 2:218,562,670...218,632,753 JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 involved_in IDA PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chr16:8,645,171...8,728,225 JBrowse link
regulation of early endosome to late endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 involved_in ISO (PMID:16554368) RGD PMID:16554368 NCBI chr 4:103,576,453...103,622,566 JBrowse link
G Dennd10 DENN domain containing 10 involved_in ISO
IBA
(PMID:30771381)
GO_REF:0000033
RGD
GO_Central
PMID:30771381 GO_REF:0000033 NCBI chr 1:259,950,955...259,974,459 JBrowse link
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 involved_in ISO (PMID:18256511) RGD PMID:18256511 NCBI chr 8:104,767,785...104,877,317 JBrowse link
G ENSRNOG00000067941 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Map2k1 mitogen activated protein kinase kinase 1 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 8:73,578,747...73,650,184 JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 7:9,241,449...9,264,216 JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr11:97,462,025...97,529,193 JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in TAS
IEA
PMID:19565474
GO_REF:0000117
UniProt PMID:19565474 GO_REF:0000117, RGD:8553538 NCBI chr 1:190,797,189...190,803,411 JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 IMP RGD PMID:18768694 RGD:13504749 NCBI chr 2:236,411,194...236,445,225 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:21724833) RGD PMID:21724833 NCBI chr 3:166,511,616...166,559,463 JBrowse link
regulation of early endosome to recycling endosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 involved_in ISO (PMID:18256511) RGD PMID:18256511 NCBI chr 8:104,767,785...104,877,317 JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO
ISS
(PMID:20026645)
GO_REF:0000024
RGD
UniProt
PMID:20026645 GO_REF:0000024 NCBI chr 8:74,118,922...74,141,760 JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr10:15,507,151...15,591,173 JBrowse link
regulation of endocytic recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in ISO (PMID:27733620) RGD PMID:27733620 NCBI chr 3:157,360,354...157,467,628 JBrowse link
G Inpp5f inositol polyphosphate-5-phosphatase F involved_in ISO
IBA
(PMID:25869669)
GO_REF:0000033
RGD
GO_Central
PMID:25869669 GO_REF:0000033 NCBI chr 1:183,190,480...183,270,276 JBrowse link
G Ndrg4 NDRG family member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:24048452)
Ensembl
RGD
PMID:24048452 GO_REF:0000107 NCBI chr19:9,351,408...9,387,398 JBrowse link
G Pla2g3 phospholipase A2, group III involved_in ISO (PMID:20393563) RGD PMID:20393563 NCBI chr14:82,589,908...82,597,542 JBrowse link
G Popdc1 popeye domain cAMP effector 1 involved_in ISO (PMID:24048452) RGD PMID:24048452 NCBI chr20:48,819,241...48,860,282 JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO
ISS
(PMID:20026645)
GO_REF:0000024
RGD
UniProt
PMID:20026645 GO_REF:0000024 NCBI chr 8:74,118,922...74,141,760 JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:10942597)
UniProt
RGD
PMID:10942597 GO_REF:0000024 NCBI chr 7:15,223,613...15,236,754 JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:20026645) RGD PMID:20026645 NCBI chr10:15,507,151...15,591,173 JBrowse link
regulation of ER to Golgi vesicle-mediated transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas1 growth arrest-specific 1 involved_in ISO (PMID:21357679) RGD PMID:21357679 NCBI chr17:4,487,716...4,490,701 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:25201882) RGD PMID:25201882 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO
IBA
(PMID:16571679)
GO_REF:0000033
RGD
GO_Central
PMID:16571679 GO_REF:0000033 NCBI chr 4:11,319,416...11,355,740 JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:19706601) RGD PMID:19706601 NCBI chr 7:90,439,726...90,450,911 JBrowse link
G Scfd1 sec1 family domain containing 1 IMP RGD PMID:14565970 RGD:2312425 NCBI chr 6:68,795,810...68,874,076 JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (PMID:19188447) RGD PMID:19188447 NCBI chr16:18,038,284...18,041,826 JBrowse link
G Yipf5 Yip1 domain family, member 5 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
(PMID:33164986)
(PMID:11489904)
GO_REF:0000033
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:11489904 PMID:33164986 GO_REF:0000024 GO_REF:0000033 NCBI chr18:32,123,814...32,136,947 JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:22748276)
(PMID:15238223)
UniProt
RGD
PMID:15238223 PMID:22748276 GO_REF:0000024 NCBI chr 3:28,642,660...28,662,689 JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:52,692,337...52,704,156 JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within ISO UniProtKB:P61916 (PMID:19723497) RGD PMID:19723497 NCBI chr20:31,811,817...31,838,562 JBrowse link
G Tmem97 transmembrane protein 97 involved_in ISS
ISO
GO_REF:0000024
(PMID:27378690)
UniProt
RGD
PMID:27378690 GO_REF:0000024 NCBI chr10:63,936,276...63,945,359 JBrowse link
regulation of intracellular lipid transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem97 transmembrane protein 97 involved_in ISS
ISO
GO_REF:0000024
(PMID:27378690)
UniProt
RGD
PMID:27378690 GO_REF:0000024 NCBI chr10:63,936,276...63,945,359 JBrowse link
regulation of intracellular protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:17294403) RGD PMID:17294403 NCBI chr15:56,846,375...56,954,090 JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in ISO
IEA
(PMID:21283621)
GO_REF:0000107
RGD
Ensembl
PMID:21283621 GO_REF:0000107 NCBI chr10:53,505,628...53,582,025 JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 involved_in ISO (PMID:22045810) RGD PMID:22045810 NCBI chr 3:156,638,811...156,687,503 JBrowse link
G Septin8 septin 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:27084579)
UniProt
RGD
PMID:27084579 GO_REF:0000024 NCBI chr10:37,684,649...37,713,704 JBrowse link
G Sh3tc2 SH3 domain and tetratricopeptide repeats 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:4367025 (PMID:23553667)
GO_Central
RGD
PMID:23553667 GO_REF:0000033 NCBI chr18:55,416,383...55,477,419 JBrowse link
G Snx3 sorting nexin 3 acts_upstream_of_or_within ISO (PMID:23416069) RGD PMID:23416069 NCBI chr20:45,992,446...46,025,361 JBrowse link
regulation of intraciliary retrograde transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt2b dynein light chain Tctex-type 2B involved_in ISO (PMID:26044572) RGD PMID:26044572 NCBI chr11:68,359,138...68,367,573 JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B involved_in ISO (PMID:27932497) RGD PMID:27932497 NCBI chr 3:71,269,425...71,343,936 JBrowse link
regulation of mRNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like involved_in ISO (PMID:11402034) RGD PMID:11402034 NCBI chr 7:11,332,671...11,362,287 JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of_or_within ISO
ISS
(PMID:23177736)
GO_REF:0000024
RGD
UniProt
PMID:23177736 GO_REF:0000024 NCBI chr10:45,844,411...45,865,853 JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17234882)
UniProt
Ensembl
RGD
PMID:17234882 GO_REF:0000024 GO_REF:0000107 NCBI chr18:23,969,352...24,011,560 JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in ISO (PMID:28418038) RGD PMID:28418038 NCBI chr 1:33,662,139...33,685,887 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:19141475) RGD PMID:19141475 NCBI chr 8:119,390,207...119,475,863 JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (PMID:17234882) RGD PMID:17234882 NCBI chr10:63,103,920...63,140,780 JBrowse link
G Thoc2 THO complex subunit 2 acts_upstream_of_or_within ISO (PMID:24315442) RGD PMID:24315442 NCBI chr  X:120,634,966...120,749,569 JBrowse link
G Thoc5 THO complex subunit 5 acts_upstream_of_or_within ISO (PMID:24315442) RGD PMID:24315442 NCBI chr14:79,758,805...79,792,718 JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) RGD PMID:22253824 NCBI chr13:62,424,312...62,487,502 JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:29196535)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:29196535 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:154,800,590...154,926,147 JBrowse link
regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk2 myosin light chain kinase 2 involved_in ISO
IEA
(PMID:16448786)
GO_REF:0000107
RGD
Ensembl
PMID:16448786 GO_REF:0000107 NCBI chr 3:161,836,705...161,848,609 JBrowse link
regulation of muscle filament sliding speed term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (PMID:10747195) RGD PMID:10747195 NCBI chr16:6,400,801...6,405,634 JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IMP PMID:10747195 BHF-UCL PMID:10747195 RGD:8554013 NCBI chr13:49,819,123...49,837,125 JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in ISO (PMID:23739967) RGD PMID:23739967 NCBI chr10:49,655,583...49,822,876 JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IDA
IBA
ISO
IMP
PMID:20098723
GO_REF:0000033
(PMID:28285821)
GO_Central
RGD
PMID:28285821 PMID:20098723 PMID:20098723 GO_REF:0000033, RGD:12050105, RGD:12050105 NCBI chr  X:14,678,896...14,708,747 JBrowse link
regulation of nuclear migration along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim58 tripartite motif-containing 58 involved_in ISO (PMID:25241935) RGD PMID:25241935 NCBI chr10:43,022,933...43,038,984 JBrowse link
regulation of nucleocytoplasmic transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A acts_upstream_of_or_within ISO MGI:106184 (PMID:15485902) RGD PMID:15485902 NCBI chr 5:109,100,763...109,114,448 JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO MGI:3773690 (PMID:20467439) RGD PMID:20467439 NCBI chr20:2,933,173...2,934,377 JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B acts_upstream_of_or_within ISO (PMID:21982707) RGD PMID:21982707 NCBI chr19:42,824,710...43,575,039 JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:15184662) RGD PMID:15184662 NCBI chr11:50,375,101...50,399,373 JBrowse link
G Nup214 nucleoporin 214 involved_in ISO (PMID:11000203) RGD PMID:11000203 NCBI chr 3:35,652,841...35,738,323 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma acts_upstream_of_or_within ISO (PMID:17369396) RGD PMID:17369396 NCBI chr12:40,043,822...40,061,301 JBrowse link
G Ppp1r12a protein phosphatase 1, regulatory subunit 12A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17369396)
Ensembl
RGD
PMID:17369396 GO_REF:0000107 NCBI chr 7:45,368,922...45,480,158 JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:12628928), (PMID:17284590)
(PMID:19801630)
RGD PMID:12628928 PMID:17284590 PMID:19801630 NCBI chr 1:211,507,845...211,516,907 JBrowse link
G Tmem53 transmembrane protein 53 involved_in ISO (PMID:33824347) RGD PMID:33824347 NCBI chr 5:130,721,780...130,737,692 JBrowse link
regulation of organelle transport along microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:24453320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24453320 GO_REF:0000024 GO_REF:0000107 NCBI chr10:85,778,267...85,786,553 JBrowse link
G Lamp1 lysosomal-associated membrane protein 1 involved_in ISO
IEA
(PMID:23632890)
GO_REF:0000107
RGD
Ensembl
PMID:23632890 GO_REF:0000107 NCBI chr16:83,058,131...83,082,843 JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:75,173,038...75,431,606 JBrowse link
G Nefh neurofilament heavy chain involved_in ISO (PMID:7536898) RGD PMID:7536898 NCBI chr14:84,044,428...84,054,413 JBrowse link
G Rhot1 ras homolog family member T1 IMP RGD PMID:24302729 RGD:12904672 NCBI chr10:65,198,700...65,262,807 JBrowse link
regulation of protein exit from endoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcc2 GRIP and coiled-coil domain containing 2 involved_in ISO
ISS
(PMID:17488291)
GO_REF:0000024
RGD
UniProt
PMID:17488291 GO_REF:0000024 NCBI chr20:26,247,394...26,293,613 JBrowse link
regulation of protein export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:10360174) RGD PMID:10360174 NCBI chr 5:109,100,763...109,114,448 JBrowse link
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (PMID:24101517) RGD PMID:24101517 NCBI chr 4:123,968,264...123,977,398 JBrowse link
G Frat1 FRAT regulator of WNT signaling pathway 1 involved_in ISO (PMID:12223487) RGD PMID:12223487 NCBI chr 1:240,638,309...240,640,857 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:12223487) RGD PMID:12223487 NCBI chr11:76,004,502...76,154,665 JBrowse link
G Ifi27 interferon, alpha-inducible protein 27 acts_upstream_of_or_within ISO UniProtKB:O14980 (PMID:22427340)
MGI:5582315 (PMID:22427340)
RGD PMID:22427340 NCBI chr 6:122,590,461...122,596,996 JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:24280217) RGD PMID:24280217 NCBI chr10:38,272,003...38,277,549 JBrowse link
G LOC134482856 serine/threonine-protein kinase Kist-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:42,859,198...42,861,210 JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176524 (PMID:12937170)
Ensembl
RGD
PMID:12937170 GO_REF:0000107 NCBI chr12:41,026,079...41,085,577 JBrowse link
G Ptpn14 protein tyrosine phosphatase, non-receptor type 14 involved_in ISO (PMID:22948661) RGD PMID:22948661 NCBI chr13:103,799,473...103,951,708 JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:31075303)
UniProt
RGD
PMID:31075303 GO_REF:0000024 NCBI chr10:105,896,476...105,903,301 JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in ISO (PMID:22253824) RGD PMID:22253824 NCBI chr13:62,424,312...62,487,502 JBrowse link
G Uhmk1 U2AF homology motif kinase 1 involved_in ISO
IBA
IEA
(PMID:12093740)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:12093740 GO_REF:0000033 GO_REF:0000107 NCBI chr13:84,929,418...84,949,194 JBrowse link
G Uhmk1l1 U2AF homology motif kinase 1l1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:43,147,379...43,149,342 JBrowse link
G Xpo1 exportin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:14981260)
Ensembl
RGD
PMID:14981260 GO_REF:0000107 NCBI chr14:101,434,450...101,476,705 JBrowse link
regulation of protein import into nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IDA RGD PMID:14657020 RGD:1566502 NCBI chr  X:116,914,320...116,918,504 JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22529382)
GO_REF:0000107
RGD
Ensembl
PMID:22529382 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145 JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:34380733) RGD PMID:34380733 NCBI chr14:34,754,279...34,800,530 JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16971387)
Ensembl
RGD
PMID:16971387 GO_REF:0000107 NCBI chr 1:5,727,111...5,845,338 JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 IDA RGD PMID:1623516 RGD:633419 NCBI chr 1:244,921,275...244,932,089 JBrowse link
G Nup54 nucleoporin 54 IDA RGD PMID:8707840 RGD:633404 NCBI chr14:15,617,630...15,636,029 JBrowse link
G Nup58 nucleoporin 58 IDA RGD PMID:8707840 RGD:633404 NCBI chr15:34,358,170...34,407,160 JBrowse link
G Nup62 nucleoporin 62 IDA RGD PMID:8707840 RGD:633404 NCBI chr 1:95,298,995...95,314,902 JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (PMID:11799106) RGD PMID:11799106 NCBI chr 1:90,324,312...90,340,627 JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT|involved_in IMP
ISO
PMID:11839768
(PMID:22253824)
RGD PMID:22253824 PMID:11839768 RGD:8553300 NCBI chr13:62,424,312...62,487,502 JBrowse link
regulation of protein targeting to vacuolar membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp7 vesicle-associated membrane protein 7 acts_upstream_of_or_within ISO (PMID:18227281) RGD PMID:18227281 NCBI chr12:16,728,486...16,764,261 JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in IMP
IBA
IDA
PMID:20098723
GO_REF:0000033
GO_Central PMID:20098723 PMID:20098723 GO_REF:0000033, RGD:12050105, RGD:12050105 NCBI chr  X:14,678,896...14,708,747 JBrowse link
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp9a ATPase phospholipid transporting 9A (putative) involved_in ISO (PMID:30213940) RGD PMID:30213940 NCBI chr 3:157,360,354...157,467,628 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO UniProtKB:Q7KVL7 (PMID:23395371) RGD PMID:23395371 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in IMP PMID:23395371 ParkinsonsUK-UCL PMID:23395371 RGD:8553873 NCBI chr13:45,859,930...45,865,468 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO
IEA
(PMID:26365382)
GO_REF:0000107
RGD
Ensembl
PMID:26365382 GO_REF:0000107 NCBI chr10:7,335,508...7,432,018 JBrowse link
regulation of RNA export from nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:12496368)
UniProt
RGD
PMID:12496368 GO_REF:0000024 NCBI chr 5:142,051,844...142,089,175 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    cellular process 19523
      cellular localization 3677
        intracellular transport 1392
          regulation of intracellular transport 307
            negative regulation of intracellular transport + 64
            positive regulation of intracellular transport + 155
            regulation of ER to Golgi vesicle-mediated transport + 12
            regulation of calcium ion import into sarcoplasmic reticulum + 5
            regulation of cargo loading into COPII-coated vesicle + 3
            regulation of dense core granule transport + 4
            regulation of early endosome to late endosome transport + 21
            regulation of early endosome to recycling endosome transport + 4
            regulation of endocytic recycling + 22
            regulation of intracellular lipid transport + 14
            regulation of intracellular protein transport + 177
            regulation of intraciliary anterograde transport + 0
            regulation of intraciliary retrograde transport + 2
            regulation of muscle filament sliding + 4
            regulation of nucleocytoplasmic transport + 143
            regulation of organelle transport along microtubule + 12
            regulation of receptor-mediated endocytosis involved in cholesterol transport + 8
            regulation of recycling endosome localization within postsynapse 1
            regulation of retrograde axon cargo transport + 2
            regulation of retrograde transport, endosome to Golgi + 6
            regulation of vacuolar transport + 3
Path 2
Term Annotations click to browse term
  biological_process 20534
    biological regulation 13821
      regulation of biological process 13375
        regulation of localization 2393
          regulation of transport 1960
            regulation of intracellular transport 307
              negative regulation of intracellular transport + 64
              positive regulation of intracellular transport + 155
              regulation of ER to Golgi vesicle-mediated transport + 12
              regulation of calcium ion import into sarcoplasmic reticulum + 5
              regulation of cargo loading into COPII-coated vesicle + 3
              regulation of dense core granule transport + 4
              regulation of early endosome to late endosome transport + 21
              regulation of early endosome to recycling endosome transport + 4
              regulation of endocytic recycling + 22
              regulation of intracellular lipid transport + 14
              regulation of intracellular protein transport + 177
              regulation of intraciliary anterograde transport + 0
              regulation of intraciliary retrograde transport + 2
              regulation of muscle filament sliding + 4
              regulation of nucleocytoplasmic transport + 143
              regulation of organelle transport along microtubule + 12
              regulation of receptor-mediated endocytosis involved in cholesterol transport + 8
              regulation of recycling endosome localization within postsynapse 1
              regulation of retrograde axon cargo transport + 2
              regulation of retrograde transport, endosome to Golgi + 6
              regulation of vacuolar transport + 3
paths to the root