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ONTOLOGY REPORT - ANNOTATIONS

Term:early phagosome
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Accession:GO:0032009 term browser browse the term
Definition:A membrane-bounded intracellular vesicle as initially formed upon the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: early phagocytic vesicle


show annotations for term's descendants           Sort by:
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in ISO (PMID:25568335) RGD PMID:25568335 NCBI chr16:2,118,503...2,166,741 JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:25568335) RGD PMID:25568335 NCBI chr 7:20,135,248...20,184,757 JBrowse link
G Pla2g5 phospholipase A2, group V located_in ISS
ISO		 GO_REF:0000024
(PMID:16407308)		 UniProt
RGD		 PMID:16407308 GO_REF:0000024 NCBI chr 5:156,324,628...156,393,065 JBrowse link
G Rab5a RAB5A, member RAS oncogene family located_in ISS
ISO		 GO_REF:0000024
(PMID:25568335)		 UniProt
RGD		 PMID:25568335 GO_REF:0000024 NCBI chr 9:6,720,057...6,749,456 JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:68,332,360...68,334,470 JBrowse link
G Slc9a9 solute carrier family 9 member A9 located_in ISO (PMID:35716776) RGD PMID:35716776 NCBI chr 8:104,112,279...104,675,944 JBrowse link
G Snx3 sorting nexin 3 located_in ISO
ISS		 (PMID:23237080)
GO_REF:0000024		 RGD
UniProt		 PMID:23237080 GO_REF:0000024 NCBI chr20:45,992,446...46,025,361 JBrowse link
G Syk spleen associated tyrosine kinase located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15845454)		 UniProt
Ensembl
RGD		 PMID:15845454 GO_REF:0000024 GO_REF:0000107 NCBI chr17:12,756,493...12,830,927 JBrowse link
G Syt11 synaptotagmin 11 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23303671), (PMID:28686317)		 UniProt
Ensembl
RGD		 PMID:23303671 PMID:28686317 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:176,503,845...176,530,354 JBrowse link
G Syt7 synaptotagmin 7 located_in ISS
ISO		 GO_REF:0000024
(PMID:16982801)		 UniProt
RGD		 PMID:16982801 GO_REF:0000024 NCBI chr 1:207,031,359...207,093,787 JBrowse link
G Tlr7 toll-like receptor 7 located_in ISO (PMID:18305481) RGD PMID:18305481 NCBI chr  X:30,644,324...30,670,796 JBrowse link
G Tlr9 toll-like receptor 9 located_in ISO (PMID:18305481) RGD PMID:18305481 NCBI chr 8:115,743,407...115,747,523 JBrowse link
G Unc13b unc-13 homolog B located_in ISO (PMID:23197834) RGD PMID:23197834 NCBI chr 5:57,288,999...57,504,110 JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator located_in ISO (PMID:18305481) RGD PMID:18305481 NCBI chr 1:201,167,388...201,178,343 JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (PMID:27219021) RGD PMID:27219021 NCBI chr 7:20,135,248...20,184,757 JBrowse link
G Mtmr4 myotubularin related protein 4 is_active_in ISO (PMID:31543504) RGD PMID:31543504 NCBI chr10:72,890,665...72,913,598 JBrowse link
G Rab31 RAB31, member RAS oncogene family located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25568335)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25568335 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:105,246,712...105,382,973 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cytoplasm 12254
        cytoplasmic vesicle 2065
          endocytic vesicle 226
            phagocytic vesicle 128
              early phagosome 16
                early phagosome lumen 0
                early phagosome membrane 3
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      organelle 14240
        membrane-bounded organelle 12805
          vesicle 2260
            intracellular vesicle 2074
              cytoplasmic vesicle 2065
                endocytic vesicle 226
                  phagocytic vesicle 128
                    early phagosome 16
                      early phagosome lumen 0
                      early phagosome membrane 3
paths to the root